CmaCh17G007580 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G007580
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Profilin
Location	Cma_Chr17: 6120509 .. 6122555 (+)
RNA-Seq Expression	CmaCh17G007580
Synteny	CmaCh17G007580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGAAGAAAGAAAAAGAAAACCTGAACGGAGATTTTTTTTTTTTTTGAAGCGATTCGAAATTCCAAGTTCCACTTTGAAGGTTGAAAAATGTCGTGGCAAACGTATGTCGACGATCACCTTATGTGTGAGATTGAAGGCAACCATCTCACCTCCGCCGCCATCATTGGACACGACGGTAGTGTTTGGGCGCAGAGTGCCTCATTCCCTCAGGTGATTGTCATTTTCGATTACGTTTGTTGTTTGTGTGATTCTGTTACGTTATCGTTCTTGTTGAGAGAAATTTGATCCGATCTGGCTCTACAACGAACGTTTTGTTTTGTATCGTGATTTTGAGTTTTTGTCTTGCGAGAGGTATGGAATTAGATTTAGATGGAGAGCCACCTCTGTTGTTTGATTTGATATTTTGAGCGGAGATTGAACTCGTACGATTTATTGTTCGATTCGTATTTATTATCAGTTGGAGTGATGCATGAAGAGGAATGTCTGATTTTCTTTTTCTCTCTTTGGATTAAACTGATTGATCATAATCTCTTGGCTTAAGATCAGGAACTCATCGAGCGCAAGGTTCGATGTTAACGCAAGTTCGTGATTAATAATTTAGTGAAGAATTGCATTCTTTGACGTGTTCGATTTTCCTTTTATTTATTTATTTTTTCCATTGTAGTGGTAGATTTATGCAGATATCAATGTGATCGCTGGATTTTGCATCGCCAAGCCGTATAATTCAATCTGGTTTAGAGAACGTTTTTGTTCCTTGGATCGTTTGAAAATTTTAACAATTTTATGTTTTAAGTTTAATCTTCCTTCCAGTTTATATCTTCGTACTGAATTTTGTTTCTATTTGATTCAGTATTTGAAAATACAAGCCTATCAAGGATGAAAAAGTAAGCAAGGAACACTTTCAAATTTAAGAACCAAATAAACACTATTCTAGAACAAGGACCATTTTCCTCTTGATTATAACATTCAGGAGACATTTAATTCTGCCATTAATAATTTAATTTGTTTGGGAATTACTTAATGCAGTTTAAGCCGGAGGAGATTTCGGCGATTATGAAGGATTTTGATGAGCCTGGTTCTCTTGCCCCAACTGGTTTACACCTTGGTGGCACTAAGTACATGGTTATCCAGGGAGAGCCTGGAGCTGTTGTTCGTGGGAAAAAGGTTGGTTTTCCGCTGCCTTAAACCGAAACTAAAACAAAACGAAAAACCAATTACAAATAAATATTTGTTTTTCATTTCAGTGTTGATCCAACATGACTTGAGGGATTGAGTACCATCTTGTTTATGTAGCTTATCTTGTAGTACATGGTTACTGAATGCGTGTGGGTTAATTTGGTTGTTGAATAGGGCGCTGGCGGAGTTACTGTGAAGAAAACTGAGAAAGCTATGATTGTTGGAATCTATGATGAACCTGTAACTCCGGGACAATGCAATATGGTTGTTGAAAGGTTGGGAGATTACCTGATCGAACAGGGTTTGTAAGCCTTGTCTCCTCCTCCTCCTCCTCCTCCTCTGCTTTACCAATTTTGATTTTGGTTGCTTTCTTCCATTCCATCTCTCATTTCATATAATTAATCTCGCGAGCTATGTGCCTCGTTCAATATCCATGAGTTTCCTTACCAGTTTCTGTAGTTTCTCAATGTTATGAGTTATCTCAAATACTCCTTCAAAGGAGAGAATAATTCATGTTGAGATGATTTGGTTCTTGGTCTACCTATTTTGTTCATGCCCGACTTGTCATTGTGACTTTTAAGTTTATGTAACGGATTCTTGATCCTAAGTATCTAGTGGCTTCTAAACTCTTGATTTTGTATCTAATAAAAGACTTCCTAGACCTTTCCCGACAAACGCTATCTCTGAGTGAGAGTAGAATATGAGAAATCAACCCGGGGGAATGGTCTAGGAATGGAAGCCCACTGAATAATTTAGATTCCGTTTTGGCCTCTTACCCTTTTCAAAAACTTTTCAGGGCTCCAAAGCATTCTCTCTCACCCATTCAAATTCCTACCATATTATTTCTTTTTGAAAAAATTATTAAAT

mRNA sequence

AAAAAGAAGAAAGAAAAAGAAAACCTGAACGGAGATTTTTTTTTTTTTTGAAGCGATTCGAAATTCCAAGTTCCACTTTGAAGGTTGAAAAATGTCGTGGCAAACGTATGTCGACGATCACCTTATGTGTGAGATTGAAGGCAACCATCTCACCTCCGCCGCCATCATTGGACACGACGGTAGTGTTTGGGCGCAGAGTGCCTCATTCCCTCAGTTTAAGCCGGAGGAGATTTCGGCGATTATGAAGGATTTTGATGAGCCTGGTTCTCTTGCCCCAACTGGTTTACACCTTGGTGGCACTAAGTACATGGTTATCCAGGGAGAGCCTGGAGCTGTTGTTCGTGGGAAAAAGGGCGCTGGCGGAGTTACTGTGAAGAAAACTGAGAAAGCTATGATTGTTGGAATCTATGATGAACCTGTAACTCCGGGACAATGCAATATGGTTGTTGAAAGGTTGGGAGATTACCTGATCGAACAGGGTTTGTAAGCCTTGTCTCCTCCTCCTCCTCCTCCTCCTCTGCTTTACCAATTTTGATTTTGGTTGCTTTCTTCCATTCCATCTCTCATTTCATATAATTAATCTCGCGAGCTATGTGCCTCGTTCAATATCCATGAGTTTCCTTACCAGTTTCTGTAGTTTCTCAATGTTATGAGTTATCTCAAATACTCCTTCAAAGGAGAGAATAATTCATGTTGAGATGATTTGGTTCTTGGTCTACCTATTTTGTTCATGCCCGACTTGTCATTGTGACTTTTAAGTTTATGTAACGGATTCTTGATCCTAAGTATCTAGTGGCTTCTAAACTCTTGATTTTGTATCTAATAAAAGACTTCCTAGACCTTTCCCGACAAACGCTATCTCTGAGTGAGAGTAGAATATGAGAAATCAACCCGGGGGAATGGTCTAGGAATGGAAGCCCACTGAATAATTTAGATTCCGTTTTGGCCTCTTACCCTTTTCAAAAACTTTTCAGGGCTCCAAAGCATTCTCTCTCACCCATTCAAATTCCTACCATATTATTTCTTTTTGAAAAAATTATTAAAT

Coding sequence (CDS)

ATGTCGTGGCAAACGTATGTCGACGATCACCTTATGTGTGAGATTGAAGGCAACCATCTCACCTCCGCCGCCATCATTGGACACGACGGTAGTGTTTGGGCGCAGAGTGCCTCATTCCCTCAGTTTAAGCCGGAGGAGATTTCGGCGATTATGAAGGATTTTGATGAGCCTGGTTCTCTTGCCCCAACTGGTTTACACCTTGGTGGCACTAAGTACATGGTTATCCAGGGAGAGCCTGGAGCTGTTGTTCGTGGGAAAAAGGGCGCTGGCGGAGTTACTGTGAAGAAAACTGAGAAAGCTATGATTGTTGGAATCTATGATGAACCTGTAACTCCGGGACAATGCAATATGGTTGTTGAAAGGTTGGGAGATTACCTGATCGAACAGGGTTTGTAA

Protein sequence

MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVERLGDYLIEQGL

Homology

[Close]

BLAST of CmaCh17G007580 vs. ExPASy Swiss-Prot
Match: Q9M7N0 (Profilin-3 OS=Hevea brasiliensis OX=3981 PE=1 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.0e-66
Identity = 112/131 (85.50%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQTYVD+HLMC+I+G+HLT+AAIIGHDGSVWAQS+SFPQFKPEE++AIMKDFDEPGSL
Sbjct: 1   MSWQTYVDEHLMCDIDGHHLTAAAIIGHDGSVWAQSSSFPQFKPEEVAAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPGAV+RGKKG+GG+TVKKT +A+I+GIYDEP+TPGQCNM+VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYL+EQG+
Sbjct: 121 RLGDYLLEQGM 131

[Close]

BLAST of CmaCh17G007580 vs. ExPASy Swiss-Prot
Match: A4GFC2 (Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.8e-66
Identity = 113/131 (86.26%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQTYVDDHLMC+IEG HLT+AA+IGHDGSVWAQSA+FPQFKPEE++AI+KDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGQHLTAAAVIGHDGSVWAQSATFPQFKPEEVAAIIKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPGAV+RGKKGAGG+TVKKT +A+I GIYDEP+TPGQCN++VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGAGGITVKKTGQALIFGIYDEPLTPGQCNIIVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYL+EQGL
Sbjct: 121 RLGDYLLEQGL 131

[Close]

BLAST of CmaCh17G007580 vs. ExPASy Swiss-Prot
Match: Q941H7 (Profilin OS=Litchi chinensis OX=151069 PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 3.0e-66
Identity = 114/131 (87.02%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQTYVDDHLMCE +G HLT+AAIIGHDGSVWAQSA+FPQFKP EI+AIMKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCETDGQHLTAAAIIGHDGSVWAQSANFPQFKPAEIAAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPGAV+RGKKG GG+TVKKT +A+I+GIYDEP+TPGQCNMVVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGPGGITVKKTTQALIIGIYDEPMTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYL++QGL
Sbjct: 121 RLGDYLVDQGL 131

[Close]

BLAST of CmaCh17G007580 vs. ExPASy Swiss-Prot
Match: A4GFC4 (Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.5e-65
Identity = 112/130 (86.15%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQ YVDDHLMC+IEG HLT+AAIIGHDGSVWAQSA+FPQFKPEE++AI+KDFDEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIEGQHLTAAAIIGHDGSVWAQSATFPQFKPEEVAAIIKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPGAV+RGKKGAGG+TVKKT +A+I GIYDEP+TPGQCN++VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGAGGITVKKTGQALIFGIYDEPLTPGQCNIIVE 120

Query: 121 RLGDYLIEQG 131
           RLGDYL+EQG
Sbjct: 121 RLGDYLLEQG 130

[Close]

BLAST of CmaCh17G007580 vs. ExPASy Swiss-Prot
Match: A4GFB9 (Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.0e-65
Identity = 112/131 (85.50%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSW TYVDDHLMC+IEG HLT+AAIIGHDGSVWAQSA+FPQFKPEE++AI+KDFDEPGSL
Sbjct: 1   MSWPTYVDDHLMCDIEGQHLTAAAIIGHDGSVWAQSATFPQFKPEEVAAIIKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHLGGTKYMVI+GEPGAV+RGKKGAGG+TVKKT +A+I GIYDEP+TPGQCN++VE
Sbjct: 61  APTGLHLGGTKYMVIRGEPGAVIRGKKGAGGITVKKTGQALIFGIYDEPLTPGQCNIIVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYL+EQGL
Sbjct: 121 RLGDYLLEQGL 131

[Close]

BLAST of CmaCh17G007580 vs. ExPASy TrEMBL
Match: A0A6J1JVP5 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111488743 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.7e-70
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of CmaCh17G007580 vs. ExPASy TrEMBL
Match: A0A6J1GNZ3 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111455809 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.7e-70
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of CmaCh17G007580 vs. ExPASy TrEMBL
Match: A0A6J1HHT1 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111464458 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 9.7e-68
Identity = 124/131 (94.66%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHD SVWAQSASFPQFKPEEI+A+MKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPGAVVRGKKGAGG+TVKKTEKA+I+GIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of CmaCh17G007580 vs. ExPASy TrEMBL
Match: A0A6J1KMJ4 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111494668 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.8e-67
Identity = 123/131 (93.89%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQTYVDDHLMC+IEGNHL+SAAIIGHD SVWAQSASFPQFKPEEI+AIMKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGNHLSSAAIIGHDASVWAQSASFPQFKPEEIAAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPGAVVRGKKGAGG+TVKKTEKA+I+GIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of CmaCh17G007580 vs. ExPASy TrEMBL
Match: A0A6M2F1W8 (Profilin OS=Populus davidiana OX=266767 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.1e-66
Identity = 117/131 (89.31%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLT+AAIIGHDGSVWAQSA+FPQFKPEEISA+MKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTAAAIIGHDGSVWAQSATFPQFKPEEISAMMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPGAV+RGKKG+GGVTVKKT +A+++G+YDEP+TPGQCNM+VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGSGGVTVKKTSQALVIGLYDEPLTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYLI+QGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of CmaCh17G007580 vs. NCBI nr
Match: XP_022953195.1 (profilin-3 [Cucurbita moschata] >XP_022992440.1 profilin-3 [Cucurbita maxima] >XP_023548906.1 profilin-3 [Cucurbita pepo subsp. pepo] >KAG6575500.1 hypothetical protein SDJN03_26139, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014040.1 hypothetical protein SDJN02_24211, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 274.2 bits (700), Expect = 5.7e-70
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of CmaCh17G007580 vs. NCBI nr
Match: XP_022964432.1 (profilin-3-like [Cucurbita moschata] >XP_023514928.1 profilin-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.8 bits (678), Expect = 2.0e-67
Identity = 124/131 (94.66%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHD SVWAQSASFPQFKPEEI+A+MKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPGAVVRGKKGAGG+TVKKTEKA+I+GIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of CmaCh17G007580 vs. NCBI nr
Match: KAG6593495.1 (hypothetical protein SDJN03_12971, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025842.1 hypothetical protein SDJN02_12340 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264.6 bits (675), Expect = 4.5e-67
Identity = 123/131 (93.89%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQTYVDDHLMC+IEGNHLTSAAIIGHD SVWAQSASFPQFKPEEI+A+MKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPGAVVRGKKGAGG+TVKKTEKA+I+GIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of CmaCh17G007580 vs. NCBI nr
Match: XP_023000408.1 (profilin-3-like [Cucurbita maxima])

HSP 1 Score: 263.5 bits (672), Expect = 1.0e-66
Identity = 123/131 (93.89%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQTYVDDHLMC+IEGNHL+SAAIIGHD SVWAQSASFPQFKPEEI+AIMKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGNHLSSAAIIGHDASVWAQSASFPQFKPEEIAAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPGAVVRGKKGAGG+TVKKTEKA+I+GIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of CmaCh17G007580 vs. NCBI nr
Match: XP_038899187.1 (profilin-3 [Benincasa hispida])

HSP 1 Score: 262.3 bits (669), Expect = 2.2e-66
Identity = 123/131 (93.89%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQTYVDDHLMC+IEGNHLTSAAIIGHD SVWAQS+SFPQFK  EISAIMKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGHDASVWAQSSSFPQFKANEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPGAVVRGKKGAGG+TVKKTEKA+I+GIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of CmaCh17G007580 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 229.6 bits (584), Expect = 1.5e-60
Identity = 104/134 (77.61%), Postives = 122/134 (91.04%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEI---EGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEP 60
           MSWQ YVD+HLMC++   +G+HLT+AAIIGHDGSVWAQSA+FPQFKP+EI+ IMKDFDEP
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 61  GSLAPTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNM 120
           G LAPTG+ L G KYMVIQGEP AV+RGKKGAGG+T+KKT ++M+ G+Y+EPVTPGQCNM
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120

Query: 121 VVERLGDYLIEQGL 132
           VVERLGDYLIEQGL
Sbjct: 121 VVERLGDYLIEQGL 134

[Close]

BLAST of CmaCh17G007580 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 227.6 bits (579), Expect = 5.6e-60
Identity = 103/134 (76.87%), Postives = 121/134 (90.30%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEI---EGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEP 60
           MSWQTYVD+HLMC++   +G+HLT+AAI+GHDGSVWAQSA+FPQFK +E S IMKDFDEP
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 61  GSLAPTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNM 120
           G LAPTGL + G KYMVIQGEPGAV+RGKKGAGG+T+KKT ++ + GIY+EPVTPGQCNM
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120

Query: 121 VVERLGDYLIEQGL 132
           VVERLGDYL+EQGL
Sbjct: 121 VVERLGDYLLEQGL 134

[Close]

BLAST of CmaCh17G007580 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 221.1 bits (562), Expect = 5.3e-58
Identity = 100/131 (76.34%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQ+YVDDHLMC++EGNHLT+AAI+G DGSVWAQSA FPQ KP+EI  I KDF+EPG L
Sbjct: 1   MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGL LGG KYMVIQGE GAV+RGKKG GGVT+KKT +A++ G YDEP+T GQCN+VVE
Sbjct: 61  APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYLIE  L
Sbjct: 121 RLGDYLIESEL 131

[Close]

BLAST of CmaCh17G007580 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 219.9 bits (559), Expect = 1.2e-57
Identity = 100/131 (76.34%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQ+YVDDHLMCE+EGNHLT AAI G DGSVWAQS++FPQ KP EI+ I KDF+E G L
Sbjct: 1   MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGL LGG KYMV+QGE GAV+RGKKG GGVT+KKT +A++ GIYDEP+T GQCN+VVE
Sbjct: 61  APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYLIE GL
Sbjct: 121 RLGDYLIESGL 131

[Close]

BLAST of CmaCh17G007580 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 218.8 bits (556), Expect = 2.6e-57
Identity = 100/131 (76.34%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60
           MSWQTYVDDHLMC++ GN LT+AAI+G DGSVWAQS +FPQ KPEEI  I  DF  PG+L
Sbjct: 38  MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97

Query: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120
           APTGL LGG KYMVIQGEP AV+RGKKGAGGVT+KKT  A++ GIYDEP+TPGQCNMVVE
Sbjct: 98  APTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVE 157

Query: 121 RLGDYLIEQGL 132
            LG+YLIE GL
Sbjct: 158 NLGEYLIESGL 168

The following BLAST results are available for this feature:

BLAST of CmaCh17G007580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M7N0	1.0e-66	85.50	Profilin-3 OS=Hevea brasiliensis OX=3981 PE=1 SV=1	[more]
A4GFC2	1.8e-66	86.26	Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1	[more]
Q941H7	3.0e-66	87.02	Profilin OS=Litchi chinensis OX=151069 PE=1 SV=1	[more]
A4GFC4	1.5e-65	86.15	Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1	[more]
A4GFB9	2.0e-65	85.50	Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1	[more]

BLAST of CmaCh17G007580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JVP5	2.7e-70	100.00	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111488743 PE=3 SV=1	[more]
A0A6J1GNZ3	2.7e-70	100.00	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111455809 PE=3 SV=1	[more]
A0A6J1HHT1	9.7e-68	94.66	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111464458 PE=3 SV=1	[more]
A0A6J1KMJ4	4.8e-67	93.89	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111494668 PE=3 SV=1	[more]
A0A6M2F1W8	4.1e-66	89.31	Profilin OS=Populus davidiana OX=266767 PE=3 SV=1	[more]

BLAST of CmaCh17G007580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953195.1	5.7e-70	100.00	profilin-3 [Cucurbita moschata] >XP_022992440.1 profilin-3 [Cucurbita maxima] >X...	[more]
XP_022964432.1	2.0e-67	94.66	profilin-3-like [Cucurbita moschata] >XP_023514928.1 profilin-3-like [Cucurbita ...	[more]
KAG6593495.1	4.5e-67	93.89	hypothetical protein SDJN03_12971, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023000408.1	1.0e-66	93.89	profilin-3-like [Cucurbita maxima]	[more]
XP_038899187.1	2.2e-66	93.89	profilin-3 [Benincasa hispida]	[more]

BLAST of CmaCh17G007580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19770.1	1.5e-60	77.61	profilin 5	[more]
AT4G29340.1	5.6e-60	76.87	profilin 4	[more]
AT2G19760.1	5.3e-58	76.34	profilin 1	[more]
AT4G29350.1	1.2e-57	76.34	profilin 2	[more]
AT5G56600.1	2.6e-57	76.34	profilin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 21..30 score: 71.5 coord: 40..60 score: 59.05 coord: 3..12 score: 76.25 coord: 64..78 score: 72.5 coord: 100..113 score: 61.07 coord: 113..130 score: 76.11
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 104..117 score: 90.0 coord: 117..130 score: 86.88 coord: 1..14 score: 87.66 coord: 27..40 score: 84.03 coord: 52..66 score: 82.79 coord: 84..99 score: 73.52 coord: 71..80 score: 96.73
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..131 e-value: 2.6E-62 score: 223.0
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..130 e-value: 1.2E-44 score: 151.5
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..131
IPR005455	Profilin	CDD	cd00148	PROF	coord: 2..130 e-value: 1.39756E-58 score: 175.591
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..131 e-value: 7.4E-58 score: 196.3
None	No IPR available	PANTHER	PTHR11604:SF29	PROFILIN	coord: 1..131
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G007580.1	CmaCh17G007580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042989	sequestering of actin monomers
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0003785	actin monomer binding
molecular_function	GO:0003779	actin binding