CmaCh17G005740 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G005740
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	voltage-gated hydrogen channel 1
Location	Cma_Chr17: 4737036 .. 4737710 (+)
RNA-Seq Expression	CmaCh17G005740
Synteny	CmaCh17G005740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGATCTCTCAAGCTCACCAACTCCGCCGGAACCCCCCGCCGCGGCCGCCGCCTCCATCCAAGCCTTAGAATTGTCTATTCAAAATGTTATGAAACTCAACCAAAGACGTATAAAATGGCATACTCTCTTTGCCACCCCAATTCCAAACACCTCCAACCCATTATCCTCATGGAGATCCCATTTGATCACCTTCCTTGAATCCACACCTTCTCATCTCATCACCATTGTTCTCCTCTTAATGGACCTTATCGTTACTGTCCTCGAACTCTCATCTTCGTTAATATCATGTAATTCGCCTGTTAGTCACAAGAGAGAAGAAGAAGTTATGGGTTTTCATTGGGTGAGCATTGCCATATTGAGCTTGCTCTCAACGAAGACCGTGGCTCTGGTGGTCGGCCTTGGCCTCTCGTTCTTCAGGCAGCCTGGTTGCGTCGTGGATGGCGTGGTTGTGGCTGTGGCGTTGGGTTTGGAGGTGGCTGCAAAGAGGAGAGGCGGTGGAGTTATAATGGTGGGGAGTTTGTGGAGGATTGTGAGGGTGGTGGAGAGTGCTTTTGAGCTAAGTGATGATGCCATTGAAGCAAAGATTGAAGGAATAGTTTGGGAGTTAGAGGGAATGAAAGAAGAAATAAGAAGAGAGAAAGAGAAGGATGAGGTGATAGATTTAGTATAA

mRNA sequence

ATGGCTGATCTCTCAAGCTCACCAACTCCGCCGGAACCCCCCGCCGCGGCCGCCGCCTCCATCCAAGCCTTAGAATTGTCTATTCAAAATGTTATGAAACTCAACCAAAGACGTATAAAATGGCATACTCTCTTTGCCACCCCAATTCCAAACACCTCCAACCCATTATCCTCATGGAGATCCCATTTGATCACCTTCCTTGAATCCACACCTTCTCATCTCATCACCATTGTTCTCCTCTTAATGGACCTTATCGTTACTGTCCTCGAACTCTCATCTTCGTTAATATCATGTAATTCGCCTGTTAGTCACAAGAGAGAAGAAGAAGTTATGGGTTTTCATTGGGTGAGCATTGCCATATTGAGCTTGCTCTCAACGAAGACCGTGGCTCTGGTGGTCGGCCTTGGCCTCTCGTTCTTCAGGCAGCCTGGTTGCGTCGTGGATGGCGTGGTTGTGGCTGTGGCGTTGGGTTTGGAGGTGGCTGCAAAGAGGAGAGGCGGTGGAGTTATAATGGTGGGGAGTTTGTGGAGGATTGTGAGGGTGGTGGAGAGTGCTTTTGAGCTAAGTGATGATGCCATTGAAGCAAAGATTGAAGGAATAGTTTGGGAGTTAGAGGGAATGAAAGAAGAAATAAGAAGAGAGAAAGAGAAGGATGAGGTGATAGATTTAGTATAA

Coding sequence (CDS)

ATGGCTGATCTCTCAAGCTCACCAACTCCGCCGGAACCCCCCGCCGCGGCCGCCGCCTCCATCCAAGCCTTAGAATTGTCTATTCAAAATGTTATGAAACTCAACCAAAGACGTATAAAATGGCATACTCTCTTTGCCACCCCAATTCCAAACACCTCCAACCCATTATCCTCATGGAGATCCCATTTGATCACCTTCCTTGAATCCACACCTTCTCATCTCATCACCATTGTTCTCCTCTTAATGGACCTTATCGTTACTGTCCTCGAACTCTCATCTTCGTTAATATCATGTAATTCGCCTGTTAGTCACAAGAGAGAAGAAGAAGTTATGGGTTTTCATTGGGTGAGCATTGCCATATTGAGCTTGCTCTCAACGAAGACCGTGGCTCTGGTGGTCGGCCTTGGCCTCTCGTTCTTCAGGCAGCCTGGTTGCGTCGTGGATGGCGTGGTTGTGGCTGTGGCGTTGGGTTTGGAGGTGGCTGCAAAGAGGAGAGGCGGTGGAGTTATAATGGTGGGGAGTTTGTGGAGGATTGTGAGGGTGGTGGAGAGTGCTTTTGAGCTAAGTGATGATGCCATTGAAGCAAAGATTGAAGGAATAGTTTGGGAGTTAGAGGGAATGAAAGAAGAAATAAGAAGAGAGAAAGAGAAGGATGAGGTGATAGATTTAGTATAA

Protein sequence

MADLSSSPTPPEPPAAAAASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSWRSHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIAILSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIVRVVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVIDLV

Homology

[Close]

BLAST of CmaCh17G005740 vs. ExPASy TrEMBL
Match: A0A6J1JZ21 (voltage-gated hydrogen channel 1 OS=Cucurbita maxima OX=3661 GN=LOC111488710 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.5e-113
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MADLSSSPTPPEPPAAAAASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSWR 60
           MADLSSSPTPPEPPAAAAASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSWR
Sbjct: 1   MADLSSSPTPPEPPAAAAASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSWR 60

Query: 61  SHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIAI 120
           SHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIAI
Sbjct: 61  SHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIAI 120

Query: 121 LSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIVR 180
           LSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIVR
Sbjct: 121 LSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIVR 180

Query: 181 VVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVIDLV 225
           VVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVIDLV
Sbjct: 181 VVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVIDLV 224

[Close]

BLAST of CmaCh17G005740 vs. ExPASy TrEMBL
Match: A0A6J1EQ27 (uncharacterized protein LOC111436358 OS=Cucurbita moschata OX=3662 GN=LOC111436358 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.4e-103
Identity = 212/224 (94.64%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 1   MADLSSSPTPPEPPA-AAAASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSW 60
           MADLSSSPTP EPPA A+AASIQALELSIQNVMKLNQRR KWHTLFATPI NT+NPLSSW
Sbjct: 1   MADLSSSPTPAEPPAPASAASIQALELSIQNVMKLNQRRRKWHTLFATPILNTTNPLSSW 60

Query: 61  RSHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIA 120
           RSHLITFLESTPSHLITIVLLL DLIVTVLEL+SSLISCNSPVSHKREEEVMGFHWVSIA
Sbjct: 61  RSHLITFLESTPSHLITIVLLLTDLIVTVLELTSSLISCNSPVSHKREEEVMGFHWVSIA 120

Query: 121 ILSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIV 180
           ILSLLSTKTVALVVGLGLSFFR+PGCVVDGVVV VALGLEVAAKRRGGGVIMVGSLWRIV
Sbjct: 121 ILSLLSTKTVALVVGLGLSFFRRPGCVVDGVVVGVALGLEVAAKRRGGGVIMVGSLWRIV 180

Query: 181 RVVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVIDL 224
           RVVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKE +EVIDL
Sbjct: 181 RVVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKE-NEVIDL 223

[Close]

BLAST of CmaCh17G005740 vs. ExPASy TrEMBL
Match: A0A5A7TIF8 (Voltage-gated hydrogen channel 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00070 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 5.7e-68
Identity = 140/207 (67.63%), Postives = 171/207 (82.61%), Query Frame = 0


Query: 18  AASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSWRSHLITFLESTPSHLITI 77
           A +I++LELSI ++ KL +RR KW  LF +PIPN  +  SSWR HLITFLESTP+H+IT+
Sbjct: 20  ATTIESLELSIHDIAKLYERRRKWRALFFSPIPNNFDTFSSWRVHLITFLESTPAHIITV 79

Query: 78  VLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIAILSLLSTKTVALVVGLGL 137
            LL+MDLI+T+LELSSSLISC S    K EE+   FHWVSI+IL+ LS K+ A+++GLGL
Sbjct: 80  FLLVMDLIITLLELSSSLISCGS--HGKDEEKASYFHWVSISILTFLSAKSAAVMLGLGL 139

Query: 138 SFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIVRVVESAFELSDDAIEAKI 197
           SFFR+PGCVVDGVV  VAL LE  A+R+GGGVIMV SLWR+VRVVESAFE+SDD IE KI
Sbjct: 140 SFFRRPGCVVDGVVAIVALILEAVAERKGGGVIMVASLWRLVRVVESAFEISDDVIEVKI 199

Query: 198 EGIVWELEGMKEEIRREKEKDEVIDLV 225
           EGIVWELE MKEEIRREKEKD++ +++
Sbjct: 200 EGIVWELERMKEEIRREKEKDKITEML 224

[Close]

BLAST of CmaCh17G005740 vs. ExPASy TrEMBL
Match: A0A1S3CLN2 (voltage-gated hydrogen channel 1 OS=Cucumis melo OX=3656 GN=LOC103502240 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 5.7e-68
Identity = 140/207 (67.63%), Postives = 171/207 (82.61%), Query Frame = 0


Query: 18  AASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSWRSHLITFLESTPSHLITI 77
           A +I++LELSI ++ KL +RR KW  LF +PIPN  +  SSWR HLITFLESTP+H+IT+
Sbjct: 20  ATTIESLELSIHDIAKLYERRRKWRALFFSPIPNNFDTFSSWRVHLITFLESTPAHIITV 79

Query: 78  VLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIAILSLLSTKTVALVVGLGL 137
            LL+MDLI+T+LELSSSLISC S    K EE+   FHWVSI+IL+ LS K+ A+++GLGL
Sbjct: 80  FLLVMDLIITLLELSSSLISCGS--HGKDEEKASYFHWVSISILTFLSAKSAAVMLGLGL 139

Query: 138 SFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIVRVVESAFELSDDAIEAKI 197
           SFFR+PGCVVDGVV  VAL LE  A+R+GGGVIMV SLWR+VRVVESAFE+SDD IE KI
Sbjct: 140 SFFRRPGCVVDGVVAIVALILEAVAERKGGGVIMVASLWRLVRVVESAFEISDDVIEVKI 199

Query: 198 EGIVWELEGMKEEIRREKEKDEVIDLV 225
           EGIVWELE MKEEIRREKEKD++ +++
Sbjct: 200 EGIVWELERMKEEIRREKEKDKITEML 224

[Close]

BLAST of CmaCh17G005740 vs. ExPASy TrEMBL
Match: A0A0A0KDR3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G022330 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 7.5e-68
Identity = 150/222 (67.57%), Postives = 175/222 (78.83%), Query Frame = 0


Query: 1   MADLSS--SPTPPEPPAAAAASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSS 60
           MA LS+  + + P      A +I++LE SI +V+KL +RR KW  LF +PIPN  +  SS
Sbjct: 1   MAILSNFLNSSSPLQSVTTATTIESLESSIHDVVKLYERRRKWRALFFSPIPNNFDAFSS 60

Query: 61  WRSHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSI 120
           WR HLITFLESTP+H+ITI LL+MDLI+TVLELSSSLISC S    K EE+   FHWVSI
Sbjct: 61  WRVHLITFLESTPAHIITIFLLVMDLIITVLELSSSLISCGS--HGKDEEKASYFHWVSI 120

Query: 121 AILSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRI 180
           +ILS LS KT AL++GLG SFFR+PGCVVDGVV  VAL LEV A+R+GGGVIMV SLWR+
Sbjct: 121 SILSFLSAKTAALMLGLGRSFFRRPGCVVDGVVAIVALVLEVVAERKGGGVIMVASLWRL 180

Query: 181 VRVVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEV 221
           VRVVESAFE+SDD IE KIEGIVWELE MKEEIRREKEKD +
Sbjct: 181 VRVVESAFEISDDTIEVKIEGIVWELEKMKEEIRREKEKDTI 220

[Close]

BLAST of CmaCh17G005740 vs. NCBI nr
Match: XP_022992388.1 (voltage-gated hydrogen channel 1 [Cucurbita maxima])

HSP 1 Score: 418.7 bits (1075), Expect = 3.2e-113
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MADLSSSPTPPEPPAAAAASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSWR 60
           MADLSSSPTPPEPPAAAAASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSWR
Sbjct: 1   MADLSSSPTPPEPPAAAAASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSWR 60

Query: 61  SHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIAI 120
           SHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIAI
Sbjct: 61  SHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIAI 120

Query: 121 LSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIVR 180
           LSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIVR
Sbjct: 121 LSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIVR 180

Query: 181 VVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVIDLV 225
           VVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVIDLV
Sbjct: 181 VVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVIDLV 224

[Close]

BLAST of CmaCh17G005740 vs. NCBI nr
Match: KAG6575333.1 (hypothetical protein SDJN03_25972, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391.7 bits (1005), Expect = 4.2e-105
Identity = 215/224 (95.98%), Postives = 218/224 (97.32%), Query Frame = 0


Query: 1   MADLSSSPTPPEPPAAA-AASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSW 60
           MADLSSSPTP EPPAAA AASIQALELSIQNVMKLNQRR KWHTLFATPIPNT+NPLSSW
Sbjct: 1   MADLSSSPTPAEPPAAASAASIQALELSIQNVMKLNQRRRKWHTLFATPIPNTTNPLSSW 60

Query: 61  RSHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIA 120
           RSHLITFLESTPSHLITIVLLL DLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIA
Sbjct: 61  RSHLITFLESTPSHLITIVLLLTDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIA 120

Query: 121 ILSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIV 180
           ILSLLSTKTVALVVGLGLSFFR+PGCVVDGVVV VALGLEVAAKRRGGGVIMVGSLWRIV
Sbjct: 121 ILSLLSTKTVALVVGLGLSFFRRPGCVVDGVVVGVALGLEVAAKRRGGGVIMVGSLWRIV 180

Query: 181 RVVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVIDL 224
           RVVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKE +EVIDL
Sbjct: 181 RVVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKE-NEVIDL 223

[Close]

BLAST of CmaCh17G005740 vs. NCBI nr
Match: XP_023548408.1 (voltage-gated hydrogen channel 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.4 bits (999), Expect = 2.1e-104
Identity = 210/223 (94.17%), Postives = 216/223 (96.86%), Query Frame = 0


Query: 1   MADLSSSPTPPEPPAAAAASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSWR 60
           MADLSSSPTP EP  A+AASIQALELSIQNVMKLNQRR +WHTLFATPIPNT+NPLSSWR
Sbjct: 1   MADLSSSPTPAEP--ASAASIQALELSIQNVMKLNQRRRQWHTLFATPIPNTTNPLSSWR 60

Query: 61  SHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIAI 120
           SHLITFLESTPSHLITIVLLL DLIVTVLELSSSLISCN PVSHKREEEVMGFHWVSIAI
Sbjct: 61  SHLITFLESTPSHLITIVLLLTDLIVTVLELSSSLISCNLPVSHKREEEVMGFHWVSIAI 120

Query: 121 LSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIVR 180
           LSLLSTKTVA+VVGLGLSFFR+PGCVVDGVVV VALGLEVAAKRRGGGVIMVGSLWRIVR
Sbjct: 121 LSLLSTKTVAMVVGLGLSFFRRPGCVVDGVVVGVALGLEVAAKRRGGGVIMVGSLWRIVR 180

Query: 181 VVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVIDL 224
           VVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEV+DL
Sbjct: 181 VVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVLDL 221

[Close]

BLAST of CmaCh17G005740 vs. NCBI nr
Match: XP_022929884.1 (uncharacterized protein LOC111436358 [Cucurbita moschata])

HSP 1 Score: 385.6 bits (989), Expect = 3.0e-103
Identity = 212/224 (94.64%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 1   MADLSSSPTPPEPPA-AAAASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSW 60
           MADLSSSPTP EPPA A+AASIQALELSIQNVMKLNQRR KWHTLFATPI NT+NPLSSW
Sbjct: 1   MADLSSSPTPAEPPAPASAASIQALELSIQNVMKLNQRRRKWHTLFATPILNTTNPLSSW 60

Query: 61  RSHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIA 120
           RSHLITFLESTPSHLITIVLLL DLIVTVLEL+SSLISCNSPVSHKREEEVMGFHWVSIA
Sbjct: 61  RSHLITFLESTPSHLITIVLLLTDLIVTVLELTSSLISCNSPVSHKREEEVMGFHWVSIA 120

Query: 121 ILSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIV 180
           ILSLLSTKTVALVVGLGLSFFR+PGCVVDGVVV VALGLEVAAKRRGGGVIMVGSLWRIV
Sbjct: 121 ILSLLSTKTVALVVGLGLSFFRRPGCVVDGVVVGVALGLEVAAKRRGGGVIMVGSLWRIV 180

Query: 181 RVVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVIDL 224
           RVVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKE +EVIDL
Sbjct: 181 RVVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKE-NEVIDL 223

[Close]

BLAST of CmaCh17G005740 vs. NCBI nr
Match: KAG7013870.1 (hypothetical protein SDJN02_24039, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.8 bits (987), Expect = 5.1e-103
Identity = 212/224 (94.64%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 1   MADLSSSPTPPEPPAAA-AASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSW 60
           MADLSSSPTP EPPAAA AASIQALELSIQNVMKLNQRR KWHTLFATPIPNT+NPLSSW
Sbjct: 1   MADLSSSPTPAEPPAAASAASIQALELSIQNVMKLNQRRRKWHTLFATPIPNTTNPLSSW 60

Query: 61  RSHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIA 120
           RSHLITFLESTPSHLITIVLLL DLIVTVLELSSSLISCNSPVSHKR+EEVMGFHWVSIA
Sbjct: 61  RSHLITFLESTPSHLITIVLLLTDLIVTVLELSSSLISCNSPVSHKRKEEVMGFHWVSIA 120

Query: 121 ILSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIV 180
           ILSLLSTKTVALVVGLGLSFFR+PG VVDGVVV VALGLEVAAKRRGGGVIMVGSLWRIV
Sbjct: 121 ILSLLSTKTVALVVGLGLSFFRRPGWVVDGVVVGVALGLEVAAKRRGGGVIMVGSLWRIV 180

Query: 181 RVVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVIDL 224
           RVVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKE +EVID+
Sbjct: 181 RVVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKE-NEVIDV 223

[Close]

BLAST of CmaCh17G005740 vs. TAIR 10
Match: AT1G10800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 3.4e-20
Identity = 51/100 (51.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 129 VALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIVRVVESAFEL 188
           +ALVV +G SFF+QPGCV+DG +  VAL L+V  +++G G I+V SLWR++RVVE+AFEL
Sbjct: 1   MALVVAMGKSFFKQPGCVMDGTLAIVALILQVLLEKKGTGFIVVVSLWRVLRVVETAFEL 60

Query: 189 SDDAIEAKIEGIVWELEGMKEE----IRREKEKDEVIDLV 225
           SD+AIE +I+GI+ + + + +E    +    EKDEVI ++
Sbjct: 61  SDEAIEVQIDGIISQFQALSKENRTLLETLAEKDEVIKML 100

The following BLAST results are available for this feature:

BLAST of CmaCh17G005740 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh17G005740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZ21	1.5e-113	100.00	voltage-gated hydrogen channel 1 OS=Cucurbita maxima OX=3661 GN=LOC111488710 PE=...	[more]
A0A6J1EQ27	1.4e-103	94.64	uncharacterized protein LOC111436358 OS=Cucurbita moschata OX=3662 GN=LOC1114363...	[more]
A0A5A7TIF8	5.7e-68	67.63	Voltage-gated hydrogen channel 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CLN2	5.7e-68	67.63	voltage-gated hydrogen channel 1 OS=Cucumis melo OX=3656 GN=LOC103502240 PE=4 SV...	[more]
A0A0A0KDR3	7.5e-68	67.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G022330 PE=4 SV=1	[more]

BLAST of CmaCh17G005740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992388.1	3.2e-113	100.00	voltage-gated hydrogen channel 1 [Cucurbita maxima]	[more]
KAG6575333.1	4.2e-105	95.98	hypothetical protein SDJN03_25972, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023548408.1	2.1e-104	94.17	voltage-gated hydrogen channel 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022929884.1	3.0e-103	94.64	uncharacterized protein LOC111436358 [Cucurbita moschata]	[more]
KAG7013870.1	5.1e-103	94.64	hypothetical protein SDJN02_24039, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmaCh17G005740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10800.1	3.4e-20	51.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 197..217
None	No IPR available	PANTHER	PTHR46480:SF2	F20B24.22	coord: 17..217
IPR027359	Voltage-dependent channel domain superfamily	GENE3D	1.20.120.350		coord: 62..188 e-value: 3.2E-7 score: 32.2
IPR031846	Voltage-gated hydrogen channel 1	PANTHER	PTHR46480	F20B24.22	coord: 17..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G005740.1	CmaCh17G005740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0005887	integral component of plasma membrane
molecular_function	GO:0030171	voltage-gated proton channel activity