CmaCh17G004760 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G004760
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	vesicle-associated protein 1-3-like
Location	Cma_Chr17: 2909341 .. 2925879 (+)
RNA-Seq Expression	CmaCh17G004760
Synteny	CmaCh17G004760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATAAGCGTCTGTACACTGCCACTGGCGCCACCGCCAGGCACAGCACAGGCACGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGCGCAGCGCCTACCATCCACACTTCGTACGCCCCCTTACGCCATTCCCTTCTTATCCCCTCTTTGTCTGCGCCCCTCTCTCTTCGGATTCCCTGCCCCCAATGCTTTTCTTCTCTTCCACTTTTGCCCCTCTCTCTAATTTCTTTAATTTTTTATTTACAATTATTTTCATAATAATAAATATATATTTTTCAATTTTCAATTTTTTTTCGACTTTACGAAAAAAACCCTTTTTAATAATCTAAATATTTTTATTATTTATAGCCCGACATTCATTCTTATTTCTCGATACTATTGCATTTAAAATTAATAATCTAAATATTAATATAGAAATTTTTATAAATATATCAATATTAATTCTTAATTAATAAATTGTAGAGGGTATTTATTCTAATAGTTTTTTTAATATAAATTTATTATTATTATTATAGTCTTTTTTTAAAAATAAATTCCTAGTATAATTTCATAACCATAATTATAATAATAATTATTAAATTTGGAAACTGAAAAATAAACACAGTATATAGTATATTTGACTTATGAGTGCTAACTAACGTCAATAAATGGGGAGATGCAAATTAGGAAATGTATATATATATATATATATAATTTATTTTATTTAATTATATAATTACCAAAAATATTATAACAATGTATGTGTTGATACCTCGGACTTAAAAAAATTTCGTTCCATCACTCGAGAACCTGATTAATTTAGATTATTCAACGCTCAACTAAAAATTTGGATCGATTTGCGGTTGACATTTTTTACTCGACGAACTTGAAAATAAAGTTATAATCTAACTCAACTGTACTTTTAAAATTATTATTAAGATTAAGGATGTTTAGCGTCAGTAACCGATATAAATGATGCATTGTGACTTGTAAAAGTTTTATATATGAGTCTTAGTCAGAGTTGGATTATTGTGAGATCGCAGATCGGTTAGAGAGGGGAACAAATCATTCCATATAAGGGTGTGTAAACTTTTCTCTTGTAGACTTATTTTAAAACCGTGAGGCGGATGACGATATCTTCTATCACTTGCACGTGTTTGGTTATAATTACACGCGTATCCATAACAATAATAAAAATAAATCTTTTTTTTAGTAGAAATAAAATAAAAGTTTCCCAAAAAAATTAAAAAAAATTGCAAAATTCAGAAATGGCAGCAGAATATATCTGCACTTTGACTTTCATATTTTATTTTTTATTTTTATTTAAAAAAAGAGAAATATTCTATTTTAATGCACATTCCACTGCTTAGGATTAGCCTGAAATACTGAAAATACCTAAAAATAACATATATTATATATATTTTATTAAAGAGTTTAAAAAGAGCAGACCAAAATTTGAACTTTATTTTAAATTATTATTTATAAAAAAAAATTATATATTTTATCTTAAATTTTAATAAATTTTTATCCATATCGTAATTTTATAATAATATCTTTCGAGGCCGAAGGTTTAAATCATGGGATTTATCAATTCTTTCGTGACTTGGTCACATACTCGAGATTTTCAATTATTCCATTTTTTTTTTAATGTTAGTATTGTATATTAATTAAATAGAATTAATTTTCATTTAATTTTAAAATTAGTTTGAATATCATTAAATTAAAAAATCAAGCAATATTTTGGGAAGTACTTAATTTAACAAAAAGTAAAAAGCAAAAAATTTATTAAACTTCCTAATTTTAAAACAAAAACACAAAATTAAACTCGATTAATACACAAAATTAGGAAGTAAATAAATCTTCTTACTCAACTCTAAAATCTCAATAAAATTCTTTCCTTTTAATTATTATTATTTAATTATTTATAAATTTTTTATTTTTCTACCTTCAATATTACATTAATAACTAAAATTACATAAAATTTAAATATCAAACCTTTATAACTCACCATGGATCACTAACATCAATTACAAACTTAAATATTCGAGTTGACCCAACGACATAAAAAAAAAAATAAACCCATAAATGGATCCGAATTTTAAATTTTTCAAAGGTTCGTATAAAGGTGATATAATTAATTATCGAGACATATGAACTAAGTTAGATATTTGGGGAGAGAGAAAGGTGAAAGAAGAGTAGAGGAGGAGCGTGTGGGGATGGGTAAAACAGTTCATCTGTTTTTTTATCTACCGTTTTTTTACTGTGCAGTAACAGAGAAAAGTCACTGTTTTACGTCTTGTCATTTGAGAAAGAGAGACACAGAAACGATGAGCAATTTATACGTACCCCAATTGGCTTAGGGTTTTCAGGATCCTTCATCTCTCTGTCTCTCTCTGTCTCTCTCTCTCCCAATGCCTTCTTAAACCCTAATCACTCCCTCCTTCTCTCATCACAACAACAATGGTGGGTTCATTAATACTTCTTCTTCTTCTTCTTCTCCTTCACCAATTAATCACTTCTAAACCCTATACTCTGTTTCTTGTTCTTGCAGCACTCCCTACCCATCTGGCTCCAAGCGCTCCTCACCCACAAGTTCTTCAACGCCTGTGTTCTTCACGAACACGCCAAAAAGAACGAAAAAAACATCTTCTGTTTCGACTGCTCTCTCGGCATTTGCCCTCACTGCCTCTCCTCCCATTCGTCCCACAAACTCCTCCAGGTCAATTCTCAACCCATTTTCATCAATACCCATTTCCCTCTTCATTCTTTCTTAATTCCTTTTTCGTTCTTCTTCAGATTAGGCGTTATGTGTATCACGATGTGATTCGATTGGATGATGCTACTAAACTCATCGACTGCGCTTCTGTTCAAGTATGTTCTTGATTGACTTTGCAGAAACAGAGTAATTTTATTGTTTATCTTAATTGGGTTTGCAGAAATAGAGTAATTTTGTTGTTTATCTTAATTGGGTTTGCAGAAACAGAGTAATTTTATTCTATATCTTAATTGGGTTTGCAGAAATAGAGTGATTTTGTTGTTCATCTTAATTGGGTTTGCGGAAACAGAGTAATTTTATTCTTTATCTTAATTGGGTTTGAAGAAACAGAGTAACCTTGTTGTTCATCTTTAATTGGGTTTGCAGAAACAGAGTAATTTTGTTGTTTTTGGTTGGTTGATTTAGTCTTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAAACAAAGGCCACAGACCAGAAACTTCCGAGGCTCCTCCGGCAACCTCTGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTTCCTGCAAGGTTTAATTTCAAAATCCCCATTCGATTTTCAATCATCTTCTGTTATGAATGTTGGTTTCGTTTCACAGATTGATTATCTGATGAAGACGGAAGGTGGCGTTTCGAGGAATGTTTTGGAGTGTAATTTCTCGGCATGGGACGACGGGCTCATGATGACGCCGGACTCTGTTCTAGAATTCGGTGGTTCGAACCAGACCTCCTCCGGTTCCGACGGCAGCGGTGTAGAAGAAGGAGGGAGGAGTGTAGTAGCGTCGACGGCAACGACGGATTTCGTGAAGAAAAAGAGAAGTAGCTTGACGGCGGCGTATAGGGCAGCGTGCCGGCCGGCTTGCTGGCCAGGGACGATTTCCGAGACGTCTGGGAGTTTATTGAGCCGGAGAAAAGGTACCCCACAGCGGGCCCCACTCTATTGAATTTTTATTTATTATTATTATTATTATAAGGAGGGGATTTTGGGGACATGGATGGCATTTTGTGTCTCTCGTGGGGGTATTTTTGTAAAGGAGGCTCCTTCTGGCTTCTGATTTAAATTTTATAATTGTTATTTTAATGATTAAAAAGAAAAAAAAAGAAAAGAAAAAAAAGAGTGGGAGATGGGTGGGGTTGTATTTTGAGGATCTGACCAAGTTTTATTATTACAACAATATCCATATTCAAAGGGTATTTTGGGTAACTTATTATTGGAAATTAATTGTCAAAATATGCTTTATTAATTGAATTGATAACTATTTCATTTTAAAAAATATTATTAAATTTTTAAAAAGTACTAAGAAATTTCTAAAATATTTAAAAACTCTCCTTTTGAAATGAATTTCAAAAGGACTTATTAAATACTTTTAATTTTTTTTTTTTGAAATTTCACGTATATTCTATTTTTTTAAAAGAAAAAACTTAAAAAATGCTTTTCAAATCTTTTTTAAATAATTTAAAAATATTTTTACCTAAAGTAATGATTTTTGCTCATAGACATTAATAATTTTTTTGAATATTTTTTTATGAAATTAAAAGATGTTAATAAAATTTTATGGGTGCTTTTTAAATATATCACTAATGTTAAAAAGTATTTTTGAATTGTTTAAAAAAGGTTGATAAGTATTTACAAAATTTTCGAAGTTCAAAAATATTTTTGAAACATATTATTTCAATCATATGCTTTCATCCCATCAACGTAAAAATCAAAGAAGCTTTGTATAACATTTTTGTTTTTATGAAATTTGTGTTTCGAAGTTTGGGCCCAACGTCATTTTCAAGGCCCATTGTGGTTTAGGCCCAACGTCATTTTCAAGGCCCATATTTTACGTCTCTAACCGCTATTAGATGCATGTCATGATTGGTTCAAGCGTAAGACGAGAAATTAACTTTATAGACAAATGTTAATAAACAAAACAACCATGTTCATTAATAAAAAGTAACTAACCTTCGATAAATTGATGTAACCTAGAGTCGTAAAGAGAAATAGCTCAAATATTGTGGTTGATTTGATGACTTTTAACGCCCTATTTCATTGGGTAGAATCGATAATAGGTTTAAGAAGACAAGAAGAATGTACCGATTTTAGATTAAAAAAAAAAAAATCAAACCTCGATGAAAATCTTGAGATTTTCGGCGAGGCGTCGAATCGGCTCTTCAACTTACACAAGTAACTAAGAGAGGATACAAGATTATAAGTGAGAGAAACCGTGGGGCTTGCATCGACCGGGTTTTGGAGTTTTAGTGAAGGCTATGTTGATTTAGGAGTAAAGGAGTGTTGTGGTATCATTTATATGAACAAGTGGTAACGAATTTTAGAAAATGACGTCAAAAAATCGAGGGTTTCGTTTTTGTGTTGTCGGGTGAGGAAGACGAAGTAGCGTTTAGGTTCTACTATATATATATATATCTATATATATATTAAAAACTTCCTACATAACATGAATTTTAGAGCATAGTAAAAATCGTGGTAACGTGAACATGGAACAATAAATTAGTAGCATATGTTAGACGAACACGACTTTCCATAATGATATAATATTGCTCACTCTGAGTATAAGCTCTCATGGTTTTGATTTGAGGTTTTTCAAAAGACCTCATACCAACTGAGACTGTATTCCTTGATTATAAACCCATGATTATTCCTTAAATTAGCCGACGTAGGACTTTCATCAAATAGCATAGACAATCAAATTTAATCGTGTTTCAGCTTTATATGGTTAAGCATACCACTTGAATAATCAATCATTTTAGGGTCGACTACATAAAATAGAATAATAATAATTATTATTTAAAATTTCAAACTTTTAAAGAAATGTATCAATAAATAACTATATATTGAAAAGTTGGTGGGTAAGACTTAAGTTTATAATTAATGCATGGAGGTAGGTGGGTAAGATTTGCAACTACCTTATTAGTTAGAACATTTCTGAGACTTATTTTATAATTTTTTTTTTTAATTTAATAACTCTTATATCCATGAAGTATTGGGTTCATACGAGATTTGAATGGTTCGAATTATTTATTTTTATTAGGAATAACATGATATTTTCATTTTTAAAATAAATAATTAAAAATGTGGAGCTACTAATTCAAAATGATGAAAGTTCTGTAACTCCCAAAAATAATTAATCGCATGAAAATCAGTTTCGTATCTGTTGCTGGTTCCGAAATTTCTCTGGTCCCTCTTTTTGTTTTTTCTTAATTTATAGATCCATCAATATTTCTCCATCATTCTGATCGAGTGAGTGTGTTTGGGTGGAATCTGAAAGCTGCTGGGATCAAGGGCGACAAAAATGAATTCTGGGGATTATATCAATATTCAACCCTCCGAGCTCAAATTCCAATGTGAGTTTATCCTTTCCACTCTCTGATCCTTTGTGTTTCTTTACAACTTTCGCTTTTAGGTCTCCAAATATTGCTGAAAAGGTGAAACAATTTCTTTTTCCAACTTTTGCGCACTTCCAGAATTGACGAATCGTATTCGATTCTTTTTCCCCTTTATTGCTGTATATTTACTTTTATTTTGTTTTTGATCATCATGGTTTGGCCTCTTTGGGCGTTGGAAATCATATTTAGATGATGGGTTTTCGATGAATTTTCTTTTTATATAGTAATCCTAGAATGTTATGATGATCCAAACTTGTTTAATTACCGTATATGTCTAGTTGAGATGTTATCTGTTAAGGTTTCAGAAAGTTACCAGAGAGAATTGCATTGTTATTCATCAGGAATTGCAAATATCTGGTTGAATTGATTGAAGGAGTTAGTTTCTTATATTTGAAATCTGTCCCTACATTTTGCTATGATTTCTCCAACATTTGAAGCTTGATCATGGCTGCAATTTCATCTAATTATGATTTTTGGATATTTGTTACGCCCTTTTCACTTTTGTAAATTGTATAATTTACTTGATTTAATGGAAAAGTTGAACTGAAGAAGCAAAGTTCTTGTTCGTTGCACTTGACAAACAAAACCGACAAATATGTGGCCTTCAAGGTACACATTTTTTGTTTATAATTGGTATAATCTTGAAATGTTTACATTTTCTGAAACCAATCATTCTAATTTAACAGGTTAAAACCACGAATCCGAAGAAGTACTGTGTTCGTCCTAATGCTGGAATCATTTTGCCGAGTAGTATAAGCGATATTACGGGTAAATCAGTATGTGAAAATAGTTGATTCTTTTTTCTCTCTATTTGAAAAATACGATTCAACTCTTCGATTTTTAACTTCATTATGTATCTGGTTTCTAGTTTTGCATGCTGGATGTTTGATTTGTTATTGATCTTTTTAGTTACCATGCAAGCTCCAAAGGAGATGCCTTCTGATATGCAATGCAAGGATAAGTTCCTAATTCAAAGTGCTATAGCACCAGATGGTACAACAGCAAAGGACATTAGTGCAGAATTGGTGGGAATGTCCTGTTTCTGCTTCCATTAGTTGAATAATTTTTTTGACTCGACAATTATCTTACGTTTTTGCTTATGTTTTACATCTTTGAATTGTAGTTTAACAAGGGAGATGGTAAGGTGGTAGATGACTTTAAGATGAGGGTCGTTTACATTTTTGCAAATCCTCCGTCGCCTGTCCCGGAAGGATCTGAAGAAGGATCCCCTTCCAGGACCAATGCAGTTGAAGATGGGAACCAAAATTTTGCATTGTTTGATGCTGTAAATGTTTTCTAGATTGTTATCTTTATTATCCTTTCTTTTCCACCTATATTTTAATTCAATTTGTTGTTAAACTTTAGGTTTCGAGATCTCTGGATGAGCCTAAAGAGATATCATCTCAGGTAATATATTCTTCTCTTGCTTCTATACAAACGCCTAAGTATTTCATCTGCTTTATCCTTTAACTAGAATGAAGGGGAAAATTAAGGAGTTACTCACTAGAAATCTCTGGGGTAGCAGCGAAACAAAATAGTTGAGATTATATTTGGTCCTGTCTTCCTATTTTCCCTTGGAAATCCAAGAGTTTCTTTCTTTCCAAATATTCTAAAAGATTGATGAAAGAAGCTAACTTAAAAAATTGATTGGCCTTTGTTTGGATGCATCTATTAGCAAGGTGGGAGCTACACCAAGAAAAGTGGGTATATAAAAAGTGTTTTAGTCATAACAGCAGAGACAGAGTTGGAAATTCGAGAATATTGATTGTCTTCTTTGGTGAGCACACAGCGGAACAAAGATCTTAGACAAGTGATTGGGTTCTTTGAATTCTATCTAAAGGTGTTAAGCTTTCTGTGACTATTACAACCACGCAAGCATACACATGTTCTTAAATGACGAACAATGGTTAATCAACAACTAAGGCATGAGCGAGGTATTGAATTTTTGTCGAATATTTTAATTATATCATAAGGAAGTGACGAAACATAGGAAAAAAAACCATTAGCAAAATAACACTTATGGAGTACACTAATGTAGACATAGTAAACTTCAGCTCGTTTAGAAACTGTGGAATGCTTCTTAGATAATTTGAATATTTTTATAATTTTTTGTTACAATTTTCCCAGAAACAACAGTTTATCGATTCAATGACACTTTTTTTATAAACTGAGACCTTAGAGATTTTCATCGACATCAACATTTAAAACCTTGGACTTGAGGGAAACTTTTTCGACTTCTAGAATTTATTATCCATATACTTGTTCGGAGGAAAATTAGCAACACTAAGAAATCTATTAACCATTCTTTTGTCTCTTGATTATTGAGATTTTTTTCCTAGTTTGAGATCTCAGGAAGAGCAAGCTTCTAGACTTCATGCTTTCTTATTTTTTTATTATATTTTTTTTCTAAAGGTTCTGTGTCACAATGAAGTGTCCTGTCCTATTTGTGTATGTGTTGTTGTTTGCCGTCCCCCTCCACCAAGAAATACCGACACTTTAGTTTGACTAGCATGTCCGTGTCTGACACTTAGATACTCTAACCCGTTTTGGATACATATTGAACCTCTGTTAGCACAACGGATGTGTTTGACACCAGTAGTACAAAGTCAATGTAGGTCCAGCATTTGTTAAACATGTACCATACATATGACTTCAAGCTTATTGACTTTGAATTTTCTTCATGTATAAAAATTATATATATTTTAATAAACGTACCATTGTCGTGTCTGTGTCCTTTTTTAAAAATTATGTCACCGTATCCATGTCGTGTTATATCCGTAATAGTATTTGTGTTTTTTAGCTTCACACTTAAATAATGCAGGGTATAGGATGTGGTTGACTGCACTCTCCCTTTTCTTGTCCAATTTTGAATATTGTTATCCACAATTGAGATGATATGGGGGCCAGGAGCGACATTATTGTTTATTTTGTAGGAAGTATTGTTTGTCAATTTAGCTATGCCATGATGCAAATATTGATGCAGGTGTCGTCTAACATTTCTAAGTTGACTGAAGAGAAAGCTGCTGCTTTGCAACAGAATCAGAAACTACGCCAGGAGCTGGTAATTTATTTTTGGATCGCATTTTATTTTCTTTATATTCGAGCTTCGTGTATTCTACGTAGTCTGATGCTTGATATTAGTCTATATTGTAAATAGCTTAGTTATAAGTGCATGACTCATATTGACCTTCATTGTTTTTTACATACTTTATTTTAGTGCACCCTTGTATGCATGTATGTACGAGTCCAAGTAACGATAGTTGTTTTTCTCCCAAACCTCTATTGACTACACCTCTTTTAGTTTTTTCTAGGAACCTTTTTCTTCATTTGTGTCAACACTTTATTCGAGTGTATTTAAAAAATTGTTAAAGTTGTTTACTTGATTGAAACAAATTTGGTTTAAATCTCATCTTGATCGATGAATTTTCGGATTTGTTTCAGTTTGGTCCATTTAATTCCTTGAGCATTAAAAAGAATACCCATTTTCGACTTGTTATATTGCTAAATTTCTACTTTCTCAATACTCATCATCTATTTAAGTTAATTGTAAGTTAATTGTGAGATCCCACGTCGATTGAAGTGGGGAATGAGTGCCAGCGAGAACGCTGGGTCTCGAAATAGGGTGAATTGTGAAATCCCACATTTGTTGGAGAGGTAAACAAAACATTTTTTTTATGAAGGTGTGTAAACCTCTCTCTAGCAAACGGGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGAGAAGCCTAAAGAAGACAATATCTGCTAGCGGTGGGCTTGGGCCGTTACAATAGTACTGTAGGGGCTCTTTTTAAAAGGTTATATTCTTCCACAAGGAGCAAGAACTGGGTCATGCTTTGATTTTTGGTATCTGGATATTATTTGCATTCAATCATGAATGAATGATTAGGGTCAAAATGTAAATGGAAATTTTACCCATGTTGTTACTTACTATGGTTTTTGAATATTTGTTTTGACAGGAACTTCTGAAGAAAGAAACAAGCGGAAGGCAGGGTGGAGGGTTCTCTGTATTGTTCGTGGTGCTAATCGGTCTCATCGGAGTTCTGATCGGTTACTTGGTGAAGAAAACATAGAGGCAAGTCAGGCATTCCCCTTGTGTTACTGCATTTTGCTGCTATTATCTGTGTTTCTGTCCAGAATTTAACAAACCACCTTAAGTGGTGGGTTCAAAACATTTTTCTAAGTTGACTCTGGATAAGTTGTTTTTCAAAGAGTACTTTTGGAATGGATTCATTTTAGCTGCTTTTCTTCTTCATCTCTACCTGGTTTCCATTTGCTACTTGTAGAAATCTTTTAAGTTCTTGTGTTCTTCGTAAAATATACGAACATTTAAAGTTGCTTCTAATAGGTCTCTAAACTTGAATTCATAGTGCAGTACCTATGTGGCGTGATAGACTATATATAATACAAATACAAGGCATTAACCCGTCAAAATAAACATGGGTTTAGATGCCGATCTTAAATCACTTGAAACAAACGAGCGTAGCAAATACAAGGCATTAACCCTTCATTTATATTTAACCTTATTCCAATTACAGCAACATCGCCACTATTACAAAATACACAAAGCAACACAAAAATATTCAATTACAAAAACATAATAATGTCACAAACTCGAAAGCAAAGCTAATTAATCAACACTCTTAATCTCTCCCCCACTTGCTTGCTTCTTCAAACTCCGTTCACCACCACGGCTGAAGCAGCGGCGGAGCTGCTGCTGCTGGTGGTGGCCGCAGCGGCGAAAGCCTCGTGTCAGCAGCGAACCAAACATGGCTCCTGCTACAAACACAAGTGCTGGCCTGACACTCACCATTTTCATGCGCTATATAATAATTCCTCTGCCTTGGCCCAGCAGAGTTGTAAGACTTCTTATACCAAGTGGCCCGTGGGGTGCGGTGGGCTGCTCAGGGGTAGCGGCTGCCGTGGTGCCCAAGTCGGCGACTTTTAATAATTCGACTGTTTTGGTTTGCTTCTCCCCCAAGTATATTCAACTTCAACCACCATCTTGGAAAAATTATTGAATATTAAATTTAACCATTTTTATTTTTATTTTTTTTCCTCTCATAATTCTAAGTCTTTGTTTCATTCAATGAATTTTGGAATCTTGGTTTATTTATTTATTTTTATTATTATTATTATTATTTGCTTGGAAATATATTGATTTTTTATTTCAATATTAAAGAAAGTAAAGACAGAAATAATTAAATGGGTATATATATATATATATATATATTTATTTATTTATTGAATAATCAATGTTTTTGAACTTTTATTGTTGATCATTTAATAAATTAAAATATTATTTTCTCTTGAAATTTCCGAATGGTTCATTTAAAAAAAACGACATGATCAAAACAATATTTAAATATATTATAAATAATTAAATAAATAAATAAAAAGAGAAAAGATTCTCTCCCCTTTTAGCCGCACTCTTTTTCTTAAAAATTATATTAAATTAATAAAAACAAATAAAATGGTAATATTAAATGTGGTCAAATTATTATATAATAGAAAAAATATATAGAAATATGATGAAATGTTATCTAAATAAATGCTGGGGACATGTGCATGTGAACGGCTGGTTGATCATAGAACAAATTTGACAATTGTCTCTATGTTTATCAACTCACCCTTTTATTTAATATAAATTAACTACTTAAAAAAAATATTAATTTCATCCTATTTCGGTCTTATTAAAAACATATAATTACATATCTAACCTATACCGTCCGACTCTACCCTAAGTCGAACTTGGAGAAGATTTTCTGTTGAGAATCCCCATTTAAATAAAAAAAAACGAGCGAATATGACAGATCATATTCCCCTCTCAACTCCGCTCGACCCACCTTACTATACATACACATACATTATATTCTCCTCTCCAACTCTACTTCGACCCTAAATTATATTGAAAAATGAAAAATTATCTTTTTTTTTTAATTATGAATTTATTTAAGTTGGATTGAGTTAACCTAACCCACTTTAAACTTATTACTAATTTTATTTATTTATTTATTTTTTAACCCTATTTAAAAGATAATTTTTTTAAAAAATATATATATTAGAATTGAATGGTAAATTTTAATTAAAAATTTTAAAATATATAAATATTTAACCAACTAACTTATTACTTTGATTTTAAAAAATTGAGTAAATGACCAAACAACTTGAACCATTGATTTAGATCTAAAAATGTCTCAATCTGACACGTGAACATCATTAATAAATATTGTAACGACATTATGAAAAAACAACGAAATGCTGTAAATAATAATAATGTAAATTTATTTAATAAAAAATTAAAATTAAAATTTTTATTTTTATTTTTTAAAATTCTATAAAAATATTATGGACATTTTCGTAAAATTGTCAAACTTTGTTTTTTTGGAAGAAAAAAAATGATTACAAAAAATAGGTGGAAGCTTTGAACAGAAGCTGAGTCATCCCGTGATCATCCCGTCTTATCTGATTGCCATTAAAAGAGCGTACAAATTCCAATTCACTTTTGTCAACACACAACTTTTTGATAATTTCAACAGATTAGCATCGCAATTCCCGACTTCATCTCATTTTCTCTCGATTTTTCGCTTTTGATTTTTTCGCTTGCTTGCCGGAGATACAGATTTCAGCCAAGAAATCGAACGAAACTTCAGTTTTGGTCTCCTCCTTCCCTGCCGGCGACTCTCAGGTTCGTATTTCTTTACCGATGATTCGATTTTGTGTTTAATCTTAGTTGACTAAATTCGTGGATTGTTGGCTTGATCGATTACTATTCCGAACTTGGAGATATTGCGCTACTTGTCTTTGTTTTATTTCTGTTCTATGCTTCAATTCCTAAAATAGTGGCTTATGGTATTGATTATTGTCTTAAAATTTGTGATTCCAGCTTCGGTCTATGAGTTTTATTGGTTCAGTTATGAATATAATATGGATTACGACTGATTGTTAGTTCAATCTCTCTCTCTCTCTCAGTTTTTTCGTGACTATAATGTCTACGAGCTCGTTCAAGCAAGAGCATGATTTTGGTATATTCTTGAGCTTTCTTATGGAATCCTGTATTTTTATTAGTTTTTCAAATTAGAATCATCTTTGAATTGTTCTGATTCTTTGATTTGTTCATTTTTTTGCAGAAAAGAGACACGCTGAGGCTGCCCGGATTAGAGAGAAGTACCCAGACAGAATTCCAGTAAGATTTATGACTTTTCTTGAGCTTTATTTTTTTGTTGTTCTGGATATATATTTTCAAATTGGATATTCATGCTTTTTATGTACTGAAATAAGGTTTATTTGACCTTTAACTGCGCAATATGTCATTCTTTGTCTGTCAGTTTATATGTATTTATGTGTGAGTATTTATATTCATGTCAAATGATATTTTTCTCAACGGATCAAAACAATTTCACGATTGCTATTAATGGCTTATGCTTATTGACTCTCTTTCCTATCCATTCCTGGCATATTCCATTTATGAACATTGCTTGCTTGACCTCTCTTATTATCTTAAGCTTAACATCTGTCCGGAAAGAAGAGCTATGTAATACATAAATTTTGGTTGTAAAGTAAAGATTAGTTGTCGATACTATTTCTATCTCGACTCGTTGAGCATGCATGTTTAGATGCTATATAAGGTACGTCTTGCTATGGAAAATTTTCATTAATGGCGTCGCCGTATTGAATACTGTATTACTATCTTTCACCCCGTGAATTTTTATGATTTCATTCCTGCTCACCCAATTTGTTTTTTCAAATATGAGATAGTTGACAGTGAGAGATTAGTGAAAGGGGATCCAGTTATGCAAGGATCATCTTTCATGTTTCTATATTCTTATATATTATTGTTATTATTATTACTATTATTAATCTTTTTTTTTTTTATTATTGAGAAATTAACCTTTCAGACCTGTCAAAAAAAAAAAAAAAAAAAAAAAAGCTCCCATCTGAAAGAATGAAAGCTTGAGGGCAATTTTAAGGGTCCCTAGTCATAGAAGCCTGAAGTCAATGAGCAGTTGCTAAAGAATAGTATATTTACTGAAACTTTCTTTATCTTCAATTACATATACATGCCAATCAAAATGTTCATGATATAAACAGTACTACTACACGTTTTTATTTTTCATGCTGTTCTGGGATGCATTCTTTATTTTTCAAATTTCTCTCTCATGTCGTTATGGTTTCATGTTTTCTTCTTGTTAGTATCATTCTCTTTTGTGTTGATCAGGTAATTGTGGAGAAGGCAGAGAGAAGTGATATTCCCAACATTGACAAAAAAAAGTAAGAGAGTTTACTTTTAGCAGTTTTACATTAGTTTCTTTACATTTTTTATTAACAAATGATAAAAAGGGGGAAAAAAAAAAGTTCCTTAACATTGAAGCCTTTTCATTTTATAGACAAACTTACTCTCTTATTCATAAGTGCTTCTTCCGCATCTCATATTTCTTCCTCCCTCCCATTTCTTTTTCCATAGTCCTTTAATGGGAGTAATGCTGGTTATGTAATTAGGACAGTATAATTGTAGAAAGATGCTGATAACTCTTGTCGACCTTCCAAGCAGTGCATTGATTGAATGGTTTAGGAATTTATTCTTCTCATTTCTTGCACTGTAATTGCAACAAGGCTTTGGTTGTAGCTTTAATATCCAATTTTTAGTGCTTGATTTTCAAACTTAACAAAGAGAGGTTTTCAGTTTCTTAATAACCTGAATACAATTTTTTCGCAGGTATTTAGTGCCTGCTGACCTGACTGTTGGTCAGTTCGTTTATGTTATTCGGAAGAGAATAAAACTGAGTGCAGAAAAAGCAATTTTCATATTCGTGGACAATGTGCTACCGCCAACAGGTTAACCACCCTTTTTCTTTTTAGGTCAAGATCTGTTGAAAATGGAAAATCAGGATCGTTCTGTTTAATAGGATGGATAATCTTTCGTTTTTTTTTCTTAATATCTTTACCTAGAAGCATAAAATTGATTAATAGATGAGATCCATGAATTGTCCCGATTCATTTAACTTCATTCTCAGTCTTGACCGTTTTTTCTGTGGTATTGTTATCATCATATTTATCATTTTATTAGGCAAATTATGTCATAACTAATTGGTTTTAACTTTAATGGTTGTGTATCTATTTAGTCCTTAAAACTCCAATTTTCTTTTTAATTCATTTTCATTCTATTAAGTTCTCATCATTAGTATCGTTAATTTAAATATTTTCACATTGCGGATTAGTGTGTTGATGACTGATGATGATTTGGTGAAACATGACACAAATGAGTTACAAGTTGGATAAAGTAAGGAAGAAGGCCCAAAAAAAAAACAAATAGTTGGCAGGTGAAATTCATTTTTAACTCGATCTTTTGATCTGCCTATCATTCTTTTACCCAATTGGCACACTACCTTGTGCCACTTTTGTTATGGAGGATGTAAGGAGCAGACAGGATTTGGGGTGTGAGAATGCCTCGCTCAAAACACATTGAACAGAGGCCAACGTTGTATATATGGATTGTCAACATGTGCGTGATGTTTAAGGGGAAACTATAAACAATAAATGAGCTGGAAAATACTAAAAATGCGTATATTCTCTCAGCTGTAACGTGGGTTTCTTACTTGTCATAGGTTTTAGATGTTAAGTATTTCTGTAGTCTAGGAGTTGTTTCTCATATTTTTGTATTTAAGCATTGGGAACCAATGGAAAAGGATGGACATTTGGGTTCCTTGGGACTCAATTTCAAAAGTCTCTACTATCTTTGCTTACTTTAGTGACAGCAATCTCTTCTTTGCTGTATACATGACGCAGAGTTTTTGTATCGACACTTTCAAACGAGAGACATCAGAAACATCTCTAATTATTGATTTCATGCTTCTGATTTTACAGGGTCTCTCATGTCTGCAATCTACGATGAGAGGAAGGATGAGGATGGCTTTCTCTATGTTACGTACAGTGGAGAGAACACATTTGGGTGACACCCACAAAAGTATGCAGTTTCCTGCTCTCTCTCCTTGTTTATTATTGTCTTTATCAGTCTCCCGCAACCCATTGTTAATCTTTGTTACTGTTTGTGCCAAACGTATGCCAAATTGCGTCTGTAAATACATTGTATAGTCGATGACAGACTTCTTATAGATATATATATATATATCCTCTGATAAACTTCGAGACCATAGTCATTATTTCAACTTGTAATCCAGTTGAATTGTACCTAATGAAGTGCTAAAAGTTGTAAACTGTAAAGCTTTGATGGCCTTGATTCAGATTTGAAGTTCGAAATGAACATATTGAACTGATCAAACCAGATTTTAGTTAGGAATTAATTATCTCGACTAAGTTGTATATATTGGACACTCTCACTTCGTTGCTTA

mRNA sequence

ATGCATAAGCGTCTGTACACTGCCACTGGCGCCACCGCCAGGCACAGCACAGGCACGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGCGCAGCGCCTACCATCCACACTTCCACTCCCTACCCATCTGGCTCCAAGCGCTCCTCACCCACAAGTTCTTCAACGCCTGTGTTCTTCACGAACACGCCAAAAAGAACGAAAAAAACATCTTCTGTTTCGACTGCTCTCTCGGCATTTGCCCTCACTGCCTCTCCTCCCATTCGTCCCACAAACTCCTCCAGATTAGGCGTTATGTGTATCACGATGTGATTCGATTGGATGATGCTACTAAACTCATCGACTGCGCTTCTGTTCAATCTTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAAACAAAGGCCACAGACCAGAAACTTCCGAGGCTCCTCCGGCAACCTCTGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTTCCTGCAAGATTGATTATCTGATGAAGACGGAAGGTGGCGTTTCGAGGAATGTTTTGGAGTGTAATTTCTCGGCATGGGACGACGGGCTCATGATGACGCCGGACTCTGTTCTAGAATTCGGTGGTTCGAACCAGACCTCCTCCGGTTCCGACGGCAGCGGTGTAGAAGAAGGAGGGAGGAGTGTAGTAGCGTCGACGGCAACGACGGATTTCGTGAAGAAAAAGAGAAGTAGCTTGACGGCGGCGTATAGGGCAGCGTGCCGGCCGGCTTGCTGGCCAGGGACGATTTCCGAGACGTCTGGGAGTTTATTGAGCCGGAGAAAAGTTGAACTGAAGAAGCAAAGTTCTTGTTCGTTGCACTTGACAAACAAAACCGACAAATATGTGGCCTTCAAGGTTAAAACCACGAATCCGAAGAAGTACTGTGTTCGTCCTAATGCTGGAATCATTTTGCCGAGTAGTATAAGCGATATTACGGTTACCATGCAAGCTCCAAAGGAGATGCCTTCTGATATGCAATGCAAGGATAAGTTCCTAATTCAAAGTGCTATAGCACCAGATGGTACAACAGCAAAGGACATTAGTGCAGAATTGTTTAACAAGGGAGATGGTAAGGTGGTAGATGACTTTAAGATGAGGGTCGTTTACATTTTTGCAAATCCTCCGTCGCCTGTCCCGGAAGGATCTGAAGAAGGATCCCCTTCCAGGACCAATGCAGTTGAAGATGGGAACCAAAATTTTGCATTGTTTGATGCTGTTTCGAGATCTCTGGATGAGCCTAAAGAGATATCATCTCAGGTGTCGTCTAACATTTCTAAGTTGACTGAAGAGAAAGCTGCTGCTTTGCAACAGAATCAGAAACTACGCCAGGAGCTGGAACTTCTGAAGAAAGAAACAAGCGGAAGGCAGGGTGGAGGGTTCTCTGTATTGTTCGTGGTGCTAATCGGTCTCATCGGAGTTCTGATCGGTTACTTGCGGCGGAGCTGCTGCTGCTGGTGGTGGCCGCAGCGGCGAAAGCCTCGTGTCAGCAGCGAACCAAACATGGCTCCTGCTACAAACACAAGTGCTGGCCTGACACTCACCATTTTCATGCGCTATATAATAATTCCTCTGCCTTGGCCCAGCAGAGTTGTAAGACTTCTTATACCAAGTGGCCCGTGGGGTGCGGTGGGCTGCTCAGGGGTAGCGGCTGCCGTGGTGCCCAAGTCGGCGACTTTTAATAATTCGACTGTTTTGATTTCAGCCAAGAAATCGAACGAAACTTCAGTTTTGGTCTCCTCCTTCCCTGCCGGCGACTCTCAGCTTCGGTCTATGAGTTTTATTGGTTCAGTTATGAATATAATATGGATTACGACTGATTAAAAGAGACACGCTGAGGCTGCCCGGATTAGAGAGAAGTACCCAGACAGAATTCCAGTAATTGTGGAGAAGGCAGAGAGAAGTGATATTCCCAACATTGACAAAAAAAAGTATTTAGTGCCTGCTGACCTGACTGTTGGTCAGTTCGTTTATGTTATTCGGAAGAGAATAAAACTGAGTGCAGAAAAAGCAATTTTCATATTCGTGGACAATGTGCTACCGCCAACAGGGTCTCTCATGTCTGCAATCTACGATGAGAGGAAGGATGAGGATGGCTTTCTCTATGTTACGTACAGTGGAGAGAACACATTTGGGTGACACCCACAAAAGTATGCAGTTTCCTGCTCTCTCTCCTTGTTTATTATTGTCTTTATCAGTCTCCCGCAACCCATTGTTAATCTTTGTTACTGTTTGTGCCAAACGTATGCCAAATTGCGTCTGTAAATACATTGTATAGTCGATGACAGACTTCTTATAGATATATATATATATATCCTCTGATAAACTTCGAGACCATAGTCATTATTTCAACTTGTAATCCAGTTGAATTGTACCTAATGAAGTGCTAAAAGTTGTAAACTGTAAAGCTTTGATGGCCTTGATTCAGATTTGAAGTTCGAAATGAACATATTGAACTGATCAAACCAGATTTTAGTTAGGAATTAATTATCTCGACTAAGTTGTATATATTGGACACTCTCACTTCGTTGCTTA

Coding sequence (CDS)

ATGCATAAGCGTCTGTACACTGCCACTGGCGCCACCGCCAGGCACAGCACAGGCACGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGCGCAGCGCCTACCATCCACACTTCCACTCCCTACCCATCTGGCTCCAAGCGCTCCTCACCCACAAGTTCTTCAACGCCTGTGTTCTTCACGAACACGCCAAAAAGAACGAAAAAAACATCTTCTGTTTCGACTGCTCTCTCGGCATTTGCCCTCACTGCCTCTCCTCCCATTCGTCCCACAAACTCCTCCAGATTAGGCGTTATGTGTATCACGATGTGATTCGATTGGATGATGCTACTAAACTCATCGACTGCGCTTCTGTTCAATCTTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAAACAAAGGCCACAGACCAGAAACTTCCGAGGCTCCTCCGGCAACCTCTGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTTCCTGCAAGATTGATTATCTGATGAAGACGGAAGGTGGCGTTTCGAGGAATGTTTTGGAGTGTAATTTCTCGGCATGGGACGACGGGCTCATGATGACGCCGGACTCTGTTCTAGAATTCGGTGGTTCGAACCAGACCTCCTCCGGTTCCGACGGCAGCGGTGTAGAAGAAGGAGGGAGGAGTGTAGTAGCGTCGACGGCAACGACGGATTTCGTGAAGAAAAAGAGAAGTAGCTTGACGGCGGCGTATAGGGCAGCGTGCCGGCCGGCTTGCTGGCCAGGGACGATTTCCGAGACGTCTGGGAGTTTATTGAGCCGGAGAAAAGTTGAACTGAAGAAGCAAAGTTCTTGTTCGTTGCACTTGACAAACAAAACCGACAAATATGTGGCCTTCAAGGTTAAAACCACGAATCCGAAGAAGTACTGTGTTCGTCCTAATGCTGGAATCATTTTGCCGAGTAGTATAAGCGATATTACGGTTACCATGCAAGCTCCAAAGGAGATGCCTTCTGATATGCAATGCAAGGATAAGTTCCTAATTCAAAGTGCTATAGCACCAGATGGTACAACAGCAAAGGACATTAGTGCAGAATTGTTTAACAAGGGAGATGGTAAGGTGGTAGATGACTTTAAGATGAGGGTCGTTTACATTTTTGCAAATCCTCCGTCGCCTGTCCCGGAAGGATCTGAAGAAGGATCCCCTTCCAGGACCAATGCAGTTGAAGATGGGAACCAAAATTTTGCATTGTTTGATGCTGTTTCGAGATCTCTGGATGAGCCTAAAGAGATATCATCTCAGGTGTCGTCTAACATTTCTAAGTTGACTGAAGAGAAAGCTGCTGCTTTGCAACAGAATCAGAAACTACGCCAGGAGCTGGAACTTCTGAAGAAAGAAACAAGCGGAAGGCAGGGTGGAGGGTTCTCTGTATTGTTCGTGGTGCTAATCGGTCTCATCGGAGTTCTGATCGGTTACTTGCGGCGGAGCTGCTGCTGCTGGTGGTGGCCGCAGCGGCGAAAGCCTCGTGTCAGCAGCGAACCAAACATGGCTCCTGCTACAAACACAAGTGCTGGCCTGACACTCACCATTTTCATGCGCTATATAATAATTCCTCTGCCTTGGCCCAGCAGAGTTGTAAGACTTCTTATACCAAGTGGCCCGTGGGGTGCGGTGGGCTGCTCAGGGGTAGCGGCTGCCGTGGTGCCCAAGTCGGCGACTTTTAATAATTCGACTGTTTTGATTTCAGCCAAGAAATCGAACGAAACTTCAGTTTTGGTCTCCTCCTTCCCTGCCGGCGACTCTCAGCTTCGGTCTATGAGTTTTATTGGTTCAGTTATGAATATAATATGGATTACGACTGATTAA

Protein sequence

MHKRLYTATGATARHSTGTAQAQAQAQAQAQRSAYHPHFHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPYLFCSLSCKIDYLMKTEGGVSRNVLECNFSAWDDGLMMTPDSVLEFGGSNQTSSGSDGSGVEEGGRSVVASTATTDFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKVELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMPSDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEGSEEGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKLRQELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYLRRSCCCWWWPQRRKPRVSSEPNMAPATNTSAGLTLTIFMRYIIIPLPWPSRVVRLLIPSGPWGAVGCSGVAAAVVPKSATFNNSTVLISAKKSNETSVLVSSFPAGDSQLRSMSFIGSVMNIIWITTD

Homology

[Close]

BLAST of CmaCh17G004760 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.8e-69
Identity = 135/217 (62.21%), Postives = 173/217 (79.72%), Query Frame = 0


Query: 275 ELKKQSSCSLHLTNK-TDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEM 334
           ELKKQSSCS+ LTNK T + VAFKVKTTNP+KYCVRPN G++LP    ++TVTMQA KE 
Sbjct: 19  ELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDSCNVTVTMQAQKEA 78

Query: 335 PSDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEG 394
           P DMQCKDKFL+Q+ +  DGTT+K++ AE+FNK  G+V++DFK+RVVYI ANPPSPVPEG
Sbjct: 79  PLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVYIPANPPSPVPEG 138

Query: 395 SEEGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKL 454
           SEEG+    +  +  +Q+ +LFD VSR+ +E  E SS+  S ISKLTEEK +A QQ+QKL
Sbjct: 139 SEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSMISKLTEEKTSATQQSQKL 198

Query: 455 RQELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYL 491
           R ELE+L+KETS +Q GG S+L ++L+GL+G +IGYL
Sbjct: 199 RLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYL 235

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BLAST of CmaCh17G004760 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.0e-55
Identity = 113/220 (51.36%), Postives = 159/220 (72.27%), Query Frame = 0


Query: 275 ELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMP 334
           ELKKQ SCSL+L NKTD YVAFKVKTTNPKKYCVRPN G++ P S S++ VTMQA KE P
Sbjct: 18  ELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPRSSSEVLVTMQAQKEAP 77

Query: 335 SDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIF-ANPPSPVPEG 394
           +D+QCKDKFL+Q  +A  G T KD++ E+F+K  G  V++ K+RVVY+    PPSPV EG
Sbjct: 78  ADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLRVVYVAPPRPPSPVREG 137

Query: 395 SEEGSPSRTNAVEDGN-QNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQK 454
           SEEGS  R +  ++GN  +F      S    + ++ SS+  + ++KLTEEK +A+Q N +
Sbjct: 138 SEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSEARALVTKLTEEKNSAVQLNNR 197

Query: 455 LRQELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYLRR 493
           L+QEL+ L++E+   + GG   ++V+L+GLIG+++GY+ +
Sbjct: 198 LQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMK 237

[Close]

BLAST of CmaCh17G004760 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.3e-55
Identity = 114/220 (51.82%), Postives = 159/220 (72.27%), Query Frame = 0


Query: 275 ELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMP 334
           ELKKQ SCSL+LTNKTD  VAFKVKTTNPKKYCVRPN G++LP S  ++ VTMQA KE P
Sbjct: 35  ELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVTMQAQKEAP 94

Query: 335 SDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIF-ANPPSPVPEG 394
           SDMQCKDKFL+Q  IA  G TAK+++ E+F+K  G  V++ K+RV Y+    PPSPV EG
Sbjct: 95  SDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRVTYVAPPRPPSPVHEG 154

Query: 395 SEEGSPSRTNAVEDGN-QNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQK 454
           SEEGS  R +  ++G+   F+    +  +    +E +S+  + I+KLTEEK +A+Q N +
Sbjct: 155 SEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARALITKLTEEKQSAIQLNNR 214

Query: 455 LRQELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYLRR 493
           L++EL+ L++E+   Q GG   ++V+L+GLIG+++GY+ +
Sbjct: 215 LQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYIMK 254

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BLAST of CmaCh17G004760 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.2e-49
Identity = 100/222 (45.05%), Postives = 137/222 (61.71%), Query Frame = 0


Query: 43  PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYH 102
           P WL AL   KFF  C  HE AKKNE+N+ C DC   +CPHC+ SH  H+LLQ+RRYVYH
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVYH 65

Query: 103 DVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPYLF 162
           DV+RL+D  KLIDC++VQ+YT NSAKVVF+K+RPQ R F+G +GN C++CDRSLQ+PY+ 
Sbjct: 66  DVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKG-AGNYCTSCDRSLQEPYIH 125

Query: 163 CSLSCKIDYLMKTEGGVSRNVLECN-FSAWDDGL----MMTPDSVLEF--------GGSN 222
           CSL CK+D++MK    ++  +  C+  +   D +    ++T D V  +         G  
Sbjct: 126 CSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVDGDE 185

Query: 223 QTSSGSDGSGVEEGGRSVVASTATTDFVKKKRSSLTAAYRAA 252
             S  S  S     G +   +  TT  V+KKR+      ++A
Sbjct: 186 SMSWSSASSDNNNAGAAAAYAATTTHVVRKKRTGFCLCAKSA 226

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BLAST of CmaCh17G004760 vs. ExPASy Swiss-Prot
Match: Q9SYC9 (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.5e-35
Identity = 84/179 (46.93%), Postives = 117/179 (65.36%), Query Frame = 0


Query: 274 VELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEM 333
           +EL K+ SCSL+LTNKT+ YVAFK KTTN KKY VRPN G++LP S  ++ V MQA KE 
Sbjct: 188 IELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPRSSCEVLVIMQALKEA 247

Query: 334 PSDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIF-ANPPSPVPE 393
           P+DMQC+DK L Q  +    TTAKD+++E+F+K  G   ++ +++V+Y+    PPSPV E
Sbjct: 248 PADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLKVMYVTPPQPPSPVQE 307

Query: 394 GSEEGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQ 452
           G+EEGS  R +  ++GN + A  D + RSL  P      + SN +  T++    L Q Q
Sbjct: 308 GTEEGSSPRASVSDNGNASEAFVDML-RSLLVP------LFSNAASSTDDHGITLPQYQ 359

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BLAST of CmaCh17G004760 vs. ExPASy TrEMBL
Match: A0A6J1L0Q7 (uncharacterized protein LOC111499311 OS=Cucurbita maxima OX=3661 GN=LOC111499311 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 1.5e-131
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 40  HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY 99
           HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY
Sbjct: 2   HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY 61

Query: 100 VYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 159
           VYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP
Sbjct: 62  VYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 121

Query: 160 YLFCSLSCKIDYLMKTEGGVSRNVLECNFSAWDDGLMMTPDSVLEFGGSNQTSSGSDGSG 219
           YLFCSLSCKIDYLMKTEGGVSRNVLECNFSAWDDGLMMTPDSVLEFGGSNQTSSGSDGSG
Sbjct: 122 YLFCSLSCKIDYLMKTEGGVSRNVLECNFSAWDDGLMMTPDSVLEFGGSNQTSSGSDGSG 181

Query: 220 VEEGGRSVVASTATTDFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK 274
           VEEGGRSVVASTATTDFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK
Sbjct: 182 VEEGGRSVVASTATTDFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK 235

[Close]

BLAST of CmaCh17G004760 vs. ExPASy TrEMBL
Match: A0A6J1H7K0 (uncharacterized protein LOC111460295 OS=Cucurbita moschata OX=3662 GN=LOC111460295 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 2.6e-126
Identity = 227/234 (97.01%), Postives = 229/234 (97.86%), Query Frame = 0


Query: 40  HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY 99
           HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY
Sbjct: 2   HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY 61

Query: 100 VYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 159
           VYHDVIRLDDATKLIDCA VQSYTTNSAKVVFL QRPQTRNFRGSSGNLCSTCDRSLQDP
Sbjct: 62  VYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQDP 121

Query: 160 YLFCSLSCKIDYLMKTEGGVSRNVLECNFSAWDDGLMMTPDSVLEFGGSNQTSSGSDGSG 219
           YLFCSLSCKIDYLMKTEGGVSRN+LECNFSAWDDGLMMTPDSVLE GGSNQTSSGSDG G
Sbjct: 122 YLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGG 181

Query: 220 VEEGGRSVVASTATTDFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK 274
           V EGGRSVVASTATT+FVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK
Sbjct: 182 V-EGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK 234

[Close]

BLAST of CmaCh17G004760 vs. ExPASy TrEMBL
Match: A0A6J1KWF7 (vesicle-associated protein 1-3-like OS=Cucurbita maxima OX=3661 GN=LOC111499313 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 4.7e-112
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 275 ELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMP 334
           ELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMP
Sbjct: 19  ELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMP 78

Query: 335 SDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEGS 394
           SDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEGS
Sbjct: 79  SDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEGS 138

Query: 395 EEGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKLR 454
           EEGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKLR
Sbjct: 139 EEGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKLR 198

Query: 455 QELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYL 491
           QELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYL
Sbjct: 199 QELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYL 234

[Close]

BLAST of CmaCh17G004760 vs. ExPASy TrEMBL
Match: A0A6J1H696 (vesicle-associated protein 1-3-like OS=Cucurbita moschata OX=3662 GN=LOC111459985 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 4.7e-112
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 275 ELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMP 334
           ELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMP
Sbjct: 19  ELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMP 78

Query: 335 SDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEGS 394
           SDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEGS
Sbjct: 79  SDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEGS 138

Query: 395 EEGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKLR 454
           EEGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKLR
Sbjct: 139 EEGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKLR 198

Query: 455 QELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYL 491
           QELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYL
Sbjct: 199 QELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYL 234

[Close]

BLAST of CmaCh17G004760 vs. ExPASy TrEMBL
Match: A0A0A0KCM1 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109690 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 7.5e-110
Identity = 205/241 (85.06%), Postives = 220/241 (91.29%), Query Frame = 0


Query: 41  SLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYV 100
           SLPIWLQALLT KFFNACV+HE AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYV
Sbjct: 3   SLPIWLQALLTEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYV 62

Query: 101 YHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPY 160
           YHDVIRLDDATKLIDCA VQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPY
Sbjct: 63  YHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPY 122

Query: 161 LFCSLSCKIDYLMKTEGGVSRNVLECNF-----SAWDDGLMMTPDSVLEFGGSNQTSSGS 220
           LFCS+SCKIDYL+KT+GG+S+++LECNF       WDDGLMMTPDSVLE  GSN++SSGS
Sbjct: 123 LFCSVSCKIDYLVKTQGGISKHLLECNFLPLPEPGWDDGLMMTPDSVLEPVGSNRSSSGS 182

Query: 221 DGSGVEEGGRSVVASTATTDFVKKKRSSLT---AAYRAACRPACWPGTISETSGSLLSRR 274
           DG G E  G+++V STATT+FVKKKRSSLT   AAYRAACRP CWPGTISETSGSL+SRR
Sbjct: 183 DGGGTE--GKTLV-STATTEFVKKKRSSLTAAAAAYRAACRPVCWPGTISETSGSLMSRR 240

[Close]

BLAST of CmaCh17G004760 vs. NCBI nr
Match: KAG6575216.1 (Vesicle-associated protein 1-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 763.5 bits (1970), Expect = 1.4e-216
Identity = 401/455 (88.13%), Postives = 414/455 (90.99%), Query Frame = 0


Query: 40  HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY 99
           HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY
Sbjct: 2   HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY 61

Query: 100 VYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 159
           VYHDVIRLDDATKLIDCA VQSYTTNSAKVVFL QRPQTRNFRGSSGNLCSTCDRSLQDP
Sbjct: 62  VYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQDP 121

Query: 160 YLFCSLSCKIDYLMKTEGGVSRNVLECNFSAWDDGLMMTPDSVLEFGGSNQTSSGSDGSG 219
           YLFCSLSCKID+LMKTEGGVSRN+LECNFSAWDDGLMMTPDSVLE GGSNQTSSGSDG G
Sbjct: 122 YLFCSLSCKIDFLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGG 181

Query: 220 VEE----GGRSVVASTATTDFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKVE 279
           VE+    G  + V      +F++ ++  L +  RA    +   G       S L + + E
Sbjct: 182 VEDSVPAGLLARVDFRDVWEFIEPEKRLLGS--RATKMNS---GDYINIQPSEL-KFQFE 241

Query: 280 LKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMPS 339
           LKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMPS
Sbjct: 242 LKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMPS 301

Query: 340 DMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEGSE 399
           DMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEGSE
Sbjct: 302 DMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEGSE 361

Query: 400 EGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKLRQ 459
           EGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKLRQ
Sbjct: 362 EGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKLRQ 421

Query: 460 ELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYL 491
           ELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYL
Sbjct: 422 ELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYL 450

[Close]

BLAST of CmaCh17G004760 vs. NCBI nr
Match: XP_023006650.1 (uncharacterized protein LOC111499311 [Cucurbita maxima])

HSP 1 Score: 479.9 bits (1234), Expect = 3.2e-131
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 40  HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY 99
           HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY
Sbjct: 2   HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY 61

Query: 100 VYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 159
           VYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP
Sbjct: 62  VYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 121

Query: 160 YLFCSLSCKIDYLMKTEGGVSRNVLECNFSAWDDGLMMTPDSVLEFGGSNQTSSGSDGSG 219
           YLFCSLSCKIDYLMKTEGGVSRNVLECNFSAWDDGLMMTPDSVLEFGGSNQTSSGSDGSG
Sbjct: 122 YLFCSLSCKIDYLMKTEGGVSRNVLECNFSAWDDGLMMTPDSVLEFGGSNQTSSGSDGSG 181

Query: 220 VEEGGRSVVASTATTDFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK 274
           VEEGGRSVVASTATTDFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK
Sbjct: 182 VEEGGRSVVASTATTDFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK 235

[Close]

BLAST of CmaCh17G004760 vs. NCBI nr
Match: XP_023548824.1 (uncharacterized protein LOC111807359 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.1 bits (1211), Expect = 1.5e-128
Identity = 229/234 (97.86%), Postives = 231/234 (98.72%), Query Frame = 0


Query: 40  HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY 99
           HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY
Sbjct: 2   HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY 61

Query: 100 VYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 159
           VYHDVIRLDDATKLIDCA VQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP
Sbjct: 62  VYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 121

Query: 160 YLFCSLSCKIDYLMKTEGGVSRNVLECNFSAWDDGLMMTPDSVLEFGGSNQTSSGSDGSG 219
           YLFCSLSCKIDYLMKTEGGVSRN+LECNFSAWDDGLMMTPDSVLE GGSNQTSSGSDG G
Sbjct: 122 YLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGG 181

Query: 220 VEEGGRSVVASTATTDFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK 274
           VEEGGRSVVASTATT+FVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK
Sbjct: 182 VEEGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK 235

[Close]

BLAST of CmaCh17G004760 vs. NCBI nr
Match: XP_022959264.1 (uncharacterized protein LOC111460295 [Cucurbita moschata])

HSP 1 Score: 462.6 bits (1189), Expect = 5.3e-126
Identity = 227/234 (97.01%), Postives = 229/234 (97.86%), Query Frame = 0


Query: 40  HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY 99
           HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY
Sbjct: 2   HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY 61

Query: 100 VYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 159
           VYHDVIRLDDATKLIDCA VQSYTTNSAKVVFL QRPQTRNFRGSSGNLCSTCDRSLQDP
Sbjct: 62  VYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQDP 121

Query: 160 YLFCSLSCKIDYLMKTEGGVSRNVLECNFSAWDDGLMMTPDSVLEFGGSNQTSSGSDGSG 219
           YLFCSLSCKIDYLMKTEGGVSRN+LECNFSAWDDGLMMTPDSVLE GGSNQTSSGSDG G
Sbjct: 122 YLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGG 181

Query: 220 VEEGGRSVVASTATTDFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK 274
           V EGGRSVVASTATT+FVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK
Sbjct: 182 V-EGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK 234

[Close]

BLAST of CmaCh17G004760 vs. NCBI nr
Match: XP_022958834.1 (vesicle-associated protein 1-3-like [Cucurbita moschata] >XP_023006652.1 vesicle-associated protein 1-3-like [Cucurbita maxima] >XP_023547648.1 vesicle-associated protein 1-3-like [Cucurbita pepo subsp. pepo] >KAG7013783.1 Vesicle-associated protein 1-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 415.2 bits (1066), Expect = 9.7e-112
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 275 ELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMP 334
           ELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMP
Sbjct: 19  ELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMP 78

Query: 335 SDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEGS 394
           SDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEGS
Sbjct: 79  SDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEGS 138

Query: 395 EEGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKLR 454
           EEGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKLR
Sbjct: 139 EEGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKLR 198

Query: 455 QELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYL 491
           QELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYL
Sbjct: 199 QELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYL 234

[Close]

BLAST of CmaCh17G004760 vs. TAIR 10
Match: AT4G00170.1 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 264.6 bits (675), Expect = 2.0e-70
Identity = 135/217 (62.21%), Postives = 173/217 (79.72%), Query Frame = 0


Query: 275 ELKKQSSCSLHLTNK-TDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEM 334
           ELKKQSSCS+ LTNK T + VAFKVKTTNP+KYCVRPN G++LP    ++TVTMQA KE 
Sbjct: 19  ELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDSCNVTVTMQAQKEA 78

Query: 335 PSDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIFANPPSPVPEG 394
           P DMQCKDKFL+Q+ +  DGTT+K++ AE+FNK  G+V++DFK+RVVYI ANPPSPVPEG
Sbjct: 79  PLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVYIPANPPSPVPEG 138

Query: 395 SEEGSPSRTNAVEDGNQNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQKL 454
           SEEG+    +  +  +Q+ +LFD VSR+ +E  E SS+  S ISKLTEEK +A QQ+QKL
Sbjct: 139 SEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSMISKLTEEKTSATQQSQKL 198

Query: 455 RQELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYL 491
           R ELE+L+KETS +Q GG S+L ++L+GL+G +IGYL
Sbjct: 199 RLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYL 235

[Close]

BLAST of CmaCh17G004760 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein )

HSP 1 Score: 238.0 bits (606), Expect = 2.0e-62
Identity = 128/233 (54.94%), Postives = 159/233 (68.24%), Query Frame = 0


Query: 43  PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYH 102
           P WL+ LL  KFFNAC+ HE  KKNEKNI C DC L ICPHCLSSH+SH+LLQIRRYVY 
Sbjct: 7   PAWLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYR 66

Query: 103 DVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPYLF 162
           DV+R++D +KL+DC+ +Q YTTNS+KVVF+ +RPQ+R FRG SGN+C TCDRSLQ PYLF
Sbjct: 67  DVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRG-SGNICITCDRSLQSPYLF 126

Query: 163 CSLSCKIDYLMKTEGGVSRNVLECN-FSAWDDGLMMTPDSVLEFGGSNQTSSGSDGS-GV 222
           C LSCKI  ++  + G+S  +  CN     D+    TP S LE  GSN+TSS S G+ G 
Sbjct: 127 CCLSCKISDVIMRQRGLSGFLRVCNVLDLTDEVTTTTPSSTLEPTGSNRTSSESSGNEGE 186

Query: 223 EEGGRSVVASTATTDFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK 274
           +      +A TATT+ V+KKRSSL+   R          T  E   + L+RRK
Sbjct: 187 DMFWCQALACTATTEIVRKKRSSLSTTCRRVTEVVSTTNT--EAPVNFLNRRK 236

[Close]

BLAST of CmaCh17G004760 vs. TAIR 10
Match: AT2G45140.1 (plant VAP homolog 12 )

HSP 1 Score: 219.5 bits (558), Expect = 7.3e-57
Identity = 113/220 (51.36%), Postives = 159/220 (72.27%), Query Frame = 0


Query: 275 ELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMP 334
           ELKKQ SCSL+L NKTD YVAFKVKTTNPKKYCVRPN G++ P S S++ VTMQA KE P
Sbjct: 18  ELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPRSSSEVLVTMQAQKEAP 77

Query: 335 SDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIF-ANPPSPVPEG 394
           +D+QCKDKFL+Q  +A  G T KD++ E+F+K  G  V++ K+RVVY+    PPSPV EG
Sbjct: 78  ADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLRVVYVAPPRPPSPVREG 137

Query: 395 SEEGSPSRTNAVEDGN-QNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQK 454
           SEEGS  R +  ++GN  +F      S    + ++ SS+  + ++KLTEEK +A+Q N +
Sbjct: 138 SEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSEARALVTKLTEEKNSAVQLNNR 197

Query: 455 LRQELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYLRR 493
           L+QEL+ L++E+   + GG   ++V+L+GLIG+++GY+ +
Sbjct: 198 LQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMK 237

[Close]

BLAST of CmaCh17G004760 vs. TAIR 10
Match: AT3G60600.1 (vesicle associated protein )

HSP 1 Score: 218.4 bits (555), Expect = 1.6e-56
Identity = 114/220 (51.82%), Postives = 159/220 (72.27%), Query Frame = 0


Query: 275 ELKKQSSCSLHLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSISDITVTMQAPKEMP 334
           ELKKQ SCSL+LTNKTD  VAFKVKTTNPKKYCVRPN G++LP S  ++ VTMQA KE P
Sbjct: 35  ELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVTMQAQKEAP 94

Query: 335 SDMQCKDKFLIQSAIAPDGTTAKDISAELFNKGDGKVVDDFKMRVVYIF-ANPPSPVPEG 394
           SDMQCKDKFL+Q  IA  G TAK+++ E+F+K  G  V++ K+RV Y+    PPSPV EG
Sbjct: 95  SDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRVTYVAPPRPPSPVHEG 154

Query: 395 SEEGSPSRTNAVEDGN-QNFALFDAVSRSLDEPKEISSQVSSNISKLTEEKAAALQQNQK 454
           SEEGS  R +  ++G+   F+    +  +    +E +S+  + I+KLTEEK +A+Q N +
Sbjct: 155 SEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARALITKLTEEKQSAIQLNNR 214

Query: 455 LRQELELLKKETSGRQGGGFSVLFVVLIGLIGVLIGYLRR 493
           L++EL+ L++E+   Q GG   ++V+L+GLIG+++GY+ +
Sbjct: 215 LQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYIMK 254

[Close]

BLAST of CmaCh17G004760 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein )

HSP 1 Score: 198.0 bits (502), Expect = 2.3e-50
Identity = 100/222 (45.05%), Postives = 137/222 (61.71%), Query Frame = 0


Query: 43  PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYH 102
           P WL AL   KFF  C  HE AKKNE+N+ C DC   +CPHC+ SH  H+LLQ+RRYVYH
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVYH 65

Query: 103 DVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPYLF 162
           DV+RL+D  KLIDC++VQ+YT NSAKVVF+K+RPQ R F+G +GN C++CDRSLQ+PY+ 
Sbjct: 66  DVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKG-AGNYCTSCDRSLQEPYIH 125

Query: 163 CSLSCKIDYLMKTEGGVSRNVLECN-FSAWDDGL----MMTPDSVLEF--------GGSN 222
           CSL CK+D++MK    ++  +  C+  +   D +    ++T D V  +         G  
Sbjct: 126 CSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVDGDE 185

Query: 223 QTSSGSDGSGVEEGGRSVVASTATTDFVKKKRSSLTAAYRAA 252
             S  S  S     G +   +  TT  V+KKR+      ++A
Sbjct: 186 SMSWSSASSDNNNAGAAAAYAATTTHVVRKKRTGFCLCAKSA 226

The following BLAST results are available for this feature:

BLAST of CmaCh17G004760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WW5	2.8e-69	62.21	Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=...	[more]
Q9SHC8	1.0e-55	51.36	Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=...	[more]
Q8VZ95	2.3e-55	51.82	Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=...	[more]
Q1G3Q4	3.2e-49	45.05	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9SYC9	1.5e-35	46.93	Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=...	[more]

BLAST of CmaCh17G004760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0Q7	1.5e-131	100.00	uncharacterized protein LOC111499311 OS=Cucurbita maxima OX=3661 GN=LOC111499311...	[more]
A0A6J1H7K0	2.6e-126	97.01	uncharacterized protein LOC111460295 OS=Cucurbita moschata OX=3662 GN=LOC1114602...	[more]
A0A6J1KWF7	4.7e-112	100.00	vesicle-associated protein 1-3-like OS=Cucurbita maxima OX=3661 GN=LOC111499313 ...	[more]
A0A6J1H696	4.7e-112	100.00	vesicle-associated protein 1-3-like OS=Cucurbita moschata OX=3662 GN=LOC11145998...	[more]
A0A0A0KCM1	7.5e-110	85.06	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109690 ...	[more]

BLAST of CmaCh17G004760 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6575216.1	1.4e-216	88.13	Vesicle-associated protein 1-3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023006650.1	3.2e-131	100.00	uncharacterized protein LOC111499311 [Cucurbita maxima]	[more]
XP_023548824.1	1.5e-128	97.86	uncharacterized protein LOC111807359 [Cucurbita pepo subsp. pepo]	[more]
XP_022959264.1	5.3e-126	97.01	uncharacterized protein LOC111460295 [Cucurbita moschata]	[more]
XP_022958834.1	9.7e-112	100.00	vesicle-associated protein 1-3-like [Cucurbita moschata] >XP_023006652.1 vesicle...	[more]

BLAST of CmaCh17G004760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00170.1	2.0e-70	62.21	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT3G60670.1	2.0e-62	54.94	PLATZ transcription factor family protein	[more]
AT2G45140.1	7.3e-57	51.36	plant VAP homolog 12	[more]
AT3G60600.1	1.6e-56	51.82	vesicle associated protein	[more]
AT2G12646.1	2.3e-50	45.05	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 436..463
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR10809:SF111	VESICLE-ASSOCIATED PROTEIN 1-3	coord: 274..490
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 97..169 e-value: 6.3E-26 score: 90.8
IPR000535	Major sperm protein (MSP) domain	PFAM	PF00635	Motile_Sperm	coord: 273..365 e-value: 6.8E-29 score: 99.9
IPR000535	Major sperm protein (MSP) domain	PROSITE	PS50202	MSP	coord: 249..382 score: 26.012217
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 268..384 e-value: 2.0E-38 score: 133.2
IPR016763	Vesicle-associated membrane-protein-associated protein	PANTHER	PTHR10809	VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN	coord: 274..490
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 58..96 score: 9.10072
IPR008962	PapD-like superfamily	SUPERFAMILY	49354	PapD-like	coord: 275..394

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G004760.1	CmaCh17G004760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090158	endoplasmic reticulum membrane organization
biological_process	GO:0061817	endoplasmic reticulum-plasma membrane tethering
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008270	zinc ion binding