CmaCh17G004300 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G004300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr17: 2532731 .. 2536352 (+)
RNA-Seq Expression	CmaCh17G004300
Synteny	CmaCh17G004300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCTCCACCAGTAGAAAGAAACCACGTGTCTAGATCCTCAAACAGTTGATTCCTTCGAAAATTTCACCTACAAATCTCAGCACCAAATTCTGCAAGAACGACTACTTCAAAAAAAAAATCCGTATGAACAAATACCTAAATCTTCAACAATACCATAAAAGTTTCTCGCGGAGATGACGGAACCTTTCCGGCGAAAGGCAAGGTACTCCAGAGACAACTTTCCGTCGATCAGTCTGGCTCCGGCCGGAGAAGAATCAAGGAGCATGGATTCTAGAATTCACCGGCGACTCGCTAGTCCGGCGACAGAGGAGAGAGGGAGAAGGAGAGAGAGAGATTGATTCTCAAGCGTGCGAGCATGCGAGGGGAAGGGTTTCGCACGCGCGCGCGTGTGGAGGTGATTCAGAATTGGGAAAATTGGCACGCACGAAGGAGGCGTGTAAGGGTATAACCGAGTGAACGTGAAGCGGGTGGATGGGACGTGTTCCCGTGTGGGTCACACGTGTTTTTGTAGGATTGGGGATAACGGTTCGGTTTGGTTTTAGATCCCCTCAGACCGAGCCAGACCGAACCGCTCCAATGAACTAAAACGTTGAACTCCATTGTAGTTGCTTTAAGCTCCGTCTTCCACAGGTCTCGCCGGCCAAGGATATCGCTGTTCTTGATTTTCAAACCCCTTTTCTACGATGATCAACGACCAGGCGCATCCGTCTGGTCTTGTCATAGCTCACACCGAAGCTATTCGCACATTTCTGACCTCGGCGTCCATAGACTCACGAATTTCTGAGGAACTCCGGCAGCTTGCTTCAAATCTCGCTTCACAAGACAATGTTCCGTATAAGCCGCTGAGAGCTATCTGGTTTGCTACGGAATCGTCCACCCGGCCGGATTTGCTCCGTCTTTTGTATGGATCGGAGTTCGTCTTTACAAGCCCTAAACCAAGGGAGAAGGTATGTATAATAATTTAATCTTGGATCTTATTTATCTAGTTCTATATTAGTCGGAGTGATGATTTGATGACAAAATTGAAGATGTGAAATCCAAATCCAAATTAATAGATGGACTCTTTGAAATTTCTGAAAATTAGGGTATAATTAACATGCAAATTAGGTTATCTAATTAGAATTCCTCTAGCTTGAAGAGAGAAGGGGGAAGAAATGAGTGCAATGTTTGGTTTCATGCTGATTTGGTGTTGAACACTGCTCTAACCAGTTGAATATTATCTCCAAAGAACTTGACATGGATATGAACTATACTCAGAACACACAATTTTTAGAACGAGAATGAGCATATGTTGAGGATTGTTGGGAGGGAGCCCACGTTGGCTACTTCAGGGAATGATGATGGGTTTATAAGTAAGGAATACATCTCCTATTAGGACTTTTGGGGAAGCCCAAAACAAAGCCACGAGAGCTTATGCTCAAAGTGAACAATATCATATCATTGTGGAGATCCGTGATTCCTAACAGCTAATATCAGATTCCTAACAGCGTAGTCAATACTTCTACGACCATGCTAATAATGATATCATTCATGTCGTGAATCCCTTCAATCTAGACATGATTTGGGCCAAGTTGTACTGGAAGATTGAGCCTTTGAACAACGTTTATGGGAATCCAAACTGACTTTTTATGCTGAAATGATAAAATTTCCAAGTTTCAGTACTTTTGGTAACATATAATTTTTCTTGTGGGCTATGTGTATACAGAGTGAGGAGTTAAAGGCTAGATTGAAGAATCTTGCGGATGTAGCAGAGAGGAAGGCCTATCAGGAACTAGTGAAGGATATTGCACCTAAGAAACCAATTGATGAGCCTTTCTCTTCCTACAAGGATCAGCTGGGGTTCGGTATGTATGCAACCTTGTCGTTTTACGTTGCCGATATATGCCAATTTACTTCTTATGATATACTCAAATACGAGCGGATTTTTTGTATAAGATAAAATTGTATGTAGTTTTATGAATTAATATGGTCTTGTCATATTTTACAAAACAGAGATTTATCATCAAGAAAATCTTTATTAAATTTTAATATGGTATTACAAGATCGTCGGAATCGGTACATCTCATGAACGTTTTACTTGAACTCTTGCAGTTTGATGAAATAATATGGTCTTGTCATATTTTAGAAAACAGAGATTTATCATCAATAAAATCTTTATTATGTGATTTGTTGATAATTTTTAATATGGGTATTACAAGATTGTCTGAATCGGTACATCTCATGAACGTTTTACTTGAACTGTTGCAGTTTTATGAAATAATATGGTCTTGTCATATTTTACAAAACAGAGATTTATCATCAATAAATATTTATTATGTGATTTGTTGATAATTTTTAATATCTGTATTACAAGATTGTTTGAATCGGTACATCTCATGAACGTTTTACTTCAACTCTTGCAGTTTTATGGAATAGTATGGTCTTGTCATATTTTACACAACAGAGATTTATCATCAACAAAATCTTTATTATGTGATTTGTTGATAATTTTTAATGTGGGTATTACAAGATCGTCTGAATTGGTACATCTCATGAACGTTTTACTTGAACTCTTGGAATTCTGAACTTCTTTTGTAACCTTTGAAATCTGTCGTATCATATGGTTCTTTCTTGTTTTCTGTTGCCTTCTGAACAACAATATTTAACAAGCCACGAGGTTGTTGCAGGTTTACACGTCGTGTTGATAATGTTTACGGGCTATCTTGTTGGATATACTTTATTCCGAGCATTGTTTAGGCATGATCCAATCATGGTATTTATTGAATATCTGTTTAATCTTCAAGCAAACTTGTTAATTTCTGATTCTCATGGTACTGTTATTTACTGGCCATCAATTTTTGTTTCTCAGAGTGCTGCTGGAGGTATCCTTGGATTGGTTTTTGGCATGCTCGTAGAAACACTTCTTTTCATTATTCGAGCATCCAGTTACGATAATCGATCTTCATCGTCTTCCCGTTCTAAGCTAAAGAAGAATCAGTAGAGTTACTTCTCTTGAGGTTTGCTTTCTTTCTACTTAAATTGAACCTATTAAGTTAGCTTTTACCCTATGTTGTGGATCCAAGCATAATAGGCAAGTAAGTAATAAGGGCCTTGCTAATGTGCTTGCTGTAATTTGTTTGTATAAAGACGTGTTCTTCTGGTGAAGAACATCAAAAGAATTGAGATCCGATTGTTCATCTCAGGAGATGAAGAAATGATTTTCTTGCCACAGAAAAATGGAAGTGCTCTTCAAATAATATTCTTTTGAAAAAGAAACCTTAATGTAAGGATACAAAGAACAATCCGTTTGAAATTTCAAGGTCCGTCTCGGTCTCGGATCGACAAAGAGTCTCTACTATATGATTTTAAACTCTTGTACATATATGGTTTTTCGGTTCGATTCGGTTCGATTTGGTTCGGTTGCTTTGACCCTAAACTCCAACATGAGATTCTGAAGCCCTCCGTCCCCCTTCCTTCGTAATTCGACTAATTATGTGACGTGGACATATTATGTCGAGGTTGGATTGTTCTCCAATTCGGACTTTTGGTATATAATGTTTTATCAAGTTGTTAATAGGCAGAAGTTATTGTTTTTTGTGATGTATTTCAGTGTTTTCACGTGTTTATTTGGTCATTTGGTA

mRNA sequence

TTATCTCCACCAGTAGAAAGAAACCACGTGTCTAGATCCTCAAACAGTTGATTCCTTCGAAAATTTCACCTACAAATCTCAGCACCAAATTCTGCAAGAACGACTACTTCAAAAAAAAAATCCGTATGAACAAATACCTAAATCTTCAACAATACCATAAAAGTTTCTCGCGGAGATGACGGAACCTTTCCGGCGAAAGGCAAGGTACTCCAGAGACAACTTTCCGTCGATCAGTCTGGCTCCGGCCGGAGAAGAATCAAGGAGCATGGATTCTAGAATTCACCGGCGACTCGCTAGTCCGGCGACAGAGGAGAGAGGGAGAAGGAGAGAGAGAGATTGATTCTCAAGCGTGCGAGCATGCGAGGGGAAGGGTTTCGCACGCGCGCGCGTGTGGAGGTGATTCAGAATTGGGAAAATTGGCACGCACGAAGGAGGCGTGTAAGGGTATAACCGAGTGAACGTGAAGCGGGTGGATGGGACGTGTTCCCGTGTGGGTCACACGTGTTTTTGTAGGATTGGGGATAACGGTTCGGTTTGGTTTTAGATCCCCTCAGACCGAGCCAGACCGAACCGCTCCAATGAACTAAAACGTTGAACTCCATTGTAGTTGCTTTAAGCTCCGTCTTCCACAGGTCTCGCCGGCCAAGGATATCGCTGTTCTTGATTTTCAAACCCCTTTTCTACGATGATCAACGACCAGGCGCATCCGTCTGGTCTTGTCATAGCTCACACCGAAGCTATTCGCACATTTCTGACCTCGGCGTCCATAGACTCACGAATTTCTGAGGAACTCCGGCAGCTTGCTTCAAATCTCGCTTCACAAGACAATGTTCCGTATAAGCCGCTGAGAGCTATCTGGTTTGCTACGGAATCGTCCACCCGGCCGGATTTGCTCCGTCTTTTGTATGGATCGGAGTTCGTCTTTACAAGCCCTAAACCAAGGGAGAAGAGTGAGGAGTTAAAGGCTAGATTGAAGAATCTTGCGGATGTAGCAGAGAGGAAGGCCTATCAGGAACTAGTGAAGGATATTGCACCTAAGAAACCAATTGATGAGCCTTTCTCTTCCTACAAGGATCAGCTGGGGTTCGGTTTACACGTCGTGTTGATAATGTTTACGGGCTATCTTGTTGGATATACTTTATTCCGAGCATTGTTTAGGCATGATCCAATCATGAGTGCTGCTGGAGGTATCCTTGGATTGGTTTTTGGCATGCTCGTAGAAACACTTCTTTTCATTATTCGAGCATCCAGTTACGATAATCGATCTTCATCGTCTTCCCGTTCTAAGCTAAAGAAGAATCAGTAGAGTTACTTCTCTTGAGGTTTGCTTTCTTTCTACTTAAATTGAACCTATTAAGTTAGCTTTTACCCTATGTTGTGGATCCAAGCATAATAGGCAAGTAAGTAATAAGGGCCTTGCTAATGTGCTTGCTGTAATTTGTTTGTATAAAGACGTGTTCTTCTGGTGAAGAACATCAAAAGAATTGAGATCCGATTGTTCATCTCAGGAGATGAAGAAATGATTTTCTTGCCACAGAAAAATGGAAGTGCTCTTCAAATAATATTCTTTTGAAAAAGAAACCTTAATGTAAGGATACAAAGAACAATCCGTTTGAAATTTCAAGGTCCGTCTCGGTCTCGGATCGACAAAGAGTCTCTACTATATGATTTTAAACTCTTGTACATATATGGTTTTTCGGTTCGATTCGGTTCGATTTGGTTCGGTTGCTTTGACCCTAAACTCCAACATGAGATTCTGAAGCCCTCCGTCCCCCTTCCTTCGTAATTCGACTAATTATGTGACGTGGACATATTATGTCGAGGTTGGATTGTTCTCCAATTCGGACTTTTGGTATATAATGTTTTATCAAGTTGTTAATAGGCAGAAGTTATTGTTTTTTGTGATGTATTTCAGTGTTTTCACGTGTTTATTTGGTCATTTGGTA

Coding sequence (CDS)

ATGATCAACGACCAGGCGCATCCGTCTGGTCTTGTCATAGCTCACACCGAAGCTATTCGCACATTTCTGACCTCGGCGTCCATAGACTCACGAATTTCTGAGGAACTCCGGCAGCTTGCTTCAAATCTCGCTTCACAAGACAATGTTCCGTATAAGCCGCTGAGAGCTATCTGGTTTGCTACGGAATCGTCCACCCGGCCGGATTTGCTCCGTCTTTTGTATGGATCGGAGTTCGTCTTTACAAGCCCTAAACCAAGGGAGAAGAGTGAGGAGTTAAAGGCTAGATTGAAGAATCTTGCGGATGTAGCAGAGAGGAAGGCCTATCAGGAACTAGTGAAGGATATTGCACCTAAGAAACCAATTGATGAGCCTTTCTCTTCCTACAAGGATCAGCTGGGGTTCGGTTTACACGTCGTGTTGATAATGTTTACGGGCTATCTTGTTGGATATACTTTATTCCGAGCATTGTTTAGGCATGATCCAATCATGAGTGCTGCTGGAGGTATCCTTGGATTGGTTTTTGGCATGCTCGTAGAAACACTTCTTTTCATTATTCGAGCATCCAGTTACGATAATCGATCTTCATCGTCTTCCCGTTCTAAGCTAAAGAAGAATCAGTAG

Protein sequence

MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFATESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKKNQ

Homology

[Close]

BLAST of CmaCh17G004300 vs. ExPASy TrEMBL
Match: A0A6J1L0S3 (uncharacterized protein LOC111499322 OS=Cucurbita maxima OX=3661 GN=LOC111499322 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.2e-106
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60
           MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA
Sbjct: 1   MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60

Query: 61  TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP 120

Query: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET 180
           IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 207
           LLFIIRASSYDNRSSSSSRSKLKKNQ
Sbjct: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 206

[Close]

BLAST of CmaCh17G004300 vs. ExPASy TrEMBL
Match: A0A6J1H4N6 (uncharacterized protein LOC111460360 OS=Cucurbita moschata OX=3662 GN=LOC111460360 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 202/206 (98.06%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60
           MINDQAHPSGLVIAHTEAIR+FLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA
Sbjct: 1   MINDQAHPSGLVIAHTEAIRSFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60

Query: 61  TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLK LADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLNGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET 180
           IDEPFSSYKDQLGFGLHVVLIMFTGYLVGY LFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 207
           LLFIIRASSYDNRSSSSSRSKLKKNQ
Sbjct: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 206

[Close]

BLAST of CmaCh17G004300 vs. ExPASy TrEMBL
Match: A0A0A0K7F5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003470 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.3e-95
Identity = 186/206 (90.29%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60
           MIND A PSGLV++HTEAIR+FLTSASIDS++S+ELRQ+AS+L SQ N+PYK LRAIWFA
Sbjct: 1   MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFA 60

Query: 61  TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLK LADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET 180
           IDEPFSSYKDQLGFGLHVVLIMFTGYLVGY LFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 207
           LLFIIR+S+YDNRSSSSSRSKLKK+Q
Sbjct: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 206

[Close]

BLAST of CmaCh17G004300 vs. ExPASy TrEMBL
Match: A0A1S3C6X8 (uncharacterized protein LOC103497719 OS=Cucumis melo OX=3656 GN=LOC103497719 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 5.0e-95
Identity = 185/206 (89.81%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60
           MIND   PSGLV++HTEAIR+FLTSASIDS++S+ELRQ+AS+LASQ N+PYK LRAIWFA
Sbjct: 1   MINDHGLPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLASQRNIPYKLLRAIWFA 60

Query: 61  TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLK LADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET 180
           IDEPFSSYKDQLGFGLHVVLIMFTGYL+GY LFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLLGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 207
           LLFIIR+S+YDNRSSSSSRSKLKK+Q
Sbjct: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 206

[Close]

BLAST of CmaCh17G004300 vs. ExPASy TrEMBL
Match: A0A5D3BV73 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001050 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 5.0e-95
Identity = 185/206 (89.81%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60
           MIND   PSGLV++HTEAIR+FLTSASIDS++S+ELRQ+AS+LASQ N+PYK LRAIWFA
Sbjct: 1   MINDHGLPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLASQRNIPYKLLRAIWFA 60

Query: 61  TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLK LADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET 180
           IDEPFSSYKDQLGFGLHVVLIMFTGYL+GY LFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLLGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 207
           LLFIIR+S+YDNRSSSSSRSKLKK+Q
Sbjct: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 206

[Close]

BLAST of CmaCh17G004300 vs. NCBI nr
Match: XP_023006665.1 (uncharacterized protein LOC111499322 [Cucurbita maxima])

HSP 1 Score: 394.8 bits (1013), Expect = 4.5e-106
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60
           MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA
Sbjct: 1   MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60

Query: 61  TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP 120

Query: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET 180
           IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 207
           LLFIIRASSYDNRSSSSSRSKLKKNQ
Sbjct: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 206

[Close]

BLAST of CmaCh17G004300 vs. NCBI nr
Match: XP_022959366.1 (uncharacterized protein LOC111460360 [Cucurbita moschata])

HSP 1 Score: 385.6 bits (989), Expect = 2.7e-103
Identity = 202/206 (98.06%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60
           MINDQAHPSGLVIAHTEAIR+FLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA
Sbjct: 1   MINDQAHPSGLVIAHTEAIRSFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60

Query: 61  TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLK LADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLNGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET 180
           IDEPFSSYKDQLGFGLHVVLIMFTGYLVGY LFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 207
           LLFIIRASSYDNRSSSSSRSKLKKNQ
Sbjct: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 206

[Close]

BLAST of CmaCh17G004300 vs. NCBI nr
Match: XP_023548168.1 (uncharacterized protein LOC111806888 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385.2 bits (988), Expect = 3.6e-103
Identity = 201/206 (97.57%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60
           MINDQAHPSGLVIAHTEAIR+FLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA
Sbjct: 1   MINDQAHPSGLVIAHTEAIRSFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60

Query: 61  TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLK LADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLNGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET 180
           +DEPFSSYKDQLGFGLHVVLIMFTGYLVGY LFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 VDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 207
           LLFIIRASSYDNRSSSSSRSKLKKNQ
Sbjct: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 206

[Close]

BLAST of CmaCh17G004300 vs. NCBI nr
Match: XP_004138504.1 (uncharacterized protein LOC101222938 [Cucumis sativus] >XP_031743185.1 uncharacterized protein LOC101222938 [Cucumis sativus] >KGN45655.1 hypothetical protein Csa_005323 [Cucumis sativus])

HSP 1 Score: 358.2 bits (918), Expect = 4.7e-95
Identity = 186/206 (90.29%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60
           MIND A PSGLV++HTEAIR+FLTSASIDS++S+ELRQ+AS+L SQ N+PYK LRAIWFA
Sbjct: 1   MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFA 60

Query: 61  TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLK LADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET 180
           IDEPFSSYKDQLGFGLHVVLIMFTGYLVGY LFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 207
           LLFIIR+S+YDNRSSSSSRSKLKK+Q
Sbjct: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 206

[Close]

BLAST of CmaCh17G004300 vs. NCBI nr
Match: XP_008458236.1 (PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo] >XP_008458237.1 PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo] >XP_008458238.1 PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo] >XP_008458239.1 PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo] >TYK03010.1 uncharacterized protein E5676_scaffold46G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 357.1 bits (915), Expect = 1.0e-94
Identity = 185/206 (89.81%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60
           MIND   PSGLV++HTEAIR+FLTSASIDS++S+ELRQ+AS+LASQ N+PYK LRAIWFA
Sbjct: 1   MINDHGLPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLASQRNIPYKLLRAIWFA 60

Query: 61  TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLK LADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET 180
           IDEPFSSYKDQLGFGLHVVLIMFTGYL+GY LFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLLGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 207
           LLFIIR+S+YDNRSSSSSRSKLKK+Q
Sbjct: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 206

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BLAST of CmaCh17G004300 vs. TAIR 10
Match: AT5G52980.1 (CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-65
Identity = 129/195 (66.15%), Postives = 151/195 (77.44%), Query Frame = 0


Query: 4   DQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFATES 63
           D  + SGL+++ TE +R+FL  AS D R+S+ELR +AS+L S++ +PYK LRAIW  ++ 
Sbjct: 5   DPKNGSGLILSATEPLRSFLALASGDRRLSDELRGIASDLRSKNTIPYKLLRAIWTGSDP 64

Query: 64  STRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKPIDE 123
           STRPDLL L  GS FVFTSPKPREKSEELK RL  L ++AERK Y ELVKDI PKK ++E
Sbjct: 65  STRPDLLGLFSGSNFVFTSPKPREKSEELKLRLVKLREIAERKEYAELVKDITPKKQVEE 124

Query: 124 PFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVETLLF 183
           PFSSYKDQLGFGLHV L MFTGYLVGY  FRALF  +P +SAAGGILGLV  MLVETLLF
Sbjct: 125 PFSSYKDQLGFGLHVGLTMFTGYLVGYASFRALFNRNPALSAAGGILGLVLAMLVETLLF 184

Query: 184 IIRASSYDNRSSSSS 199
           II+ S  D   SS S
Sbjct: 185 IIKTSKDDQIQSSKS 199

The following BLAST results are available for this feature:

BLAST of CmaCh17G004300 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh17G004300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0S3	2.2e-106	100.00	uncharacterized protein LOC111499322 OS=Cucurbita maxima OX=3661 GN=LOC111499322...	[more]
A0A6J1H4N6	1.3e-103	98.06	uncharacterized protein LOC111460360 OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]
A0A0A0K7F5	2.3e-95	90.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003470 PE=4 SV=1	[more]
A0A1S3C6X8	5.0e-95	89.81	uncharacterized protein LOC103497719 OS=Cucumis melo OX=3656 GN=LOC103497719 PE=...	[more]
A0A5D3BV73	5.0e-95	89.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmaCh17G004300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006665.1	4.5e-106	100.00	uncharacterized protein LOC111499322 [Cucurbita maxima]	[more]
XP_022959366.1	2.7e-103	98.06	uncharacterized protein LOC111460360 [Cucurbita moschata]	[more]
XP_023548168.1	3.6e-103	97.57	uncharacterized protein LOC111806888 [Cucurbita pepo subsp. pepo]	[more]
XP_004138504.1	4.7e-95	90.29	uncharacterized protein LOC101222938 [Cucumis sativus] >XP_031743185.1 uncharact...	[more]
XP_008458236.1	1.0e-94	89.81	PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo] >XP_008458237.1 P...	[more]

BLAST of CmaCh17G004300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52980.1	2.4e-65	66.15	CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..106
None	No IPR available	PANTHER	PTHR31394:SF2	BNAA02G10570D PROTEIN	coord: 4..202
IPR021013	ATPase, vacuolar ER assembly factor, Vma12	PANTHER	PTHR31394	TRANSMEMBRANE PROTEIN 199	coord: 4..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G004300.1	CmaCh17G004300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070072	vacuolar proton-transporting V-type ATPase complex assembly
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane