CmaCh17G003530 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G003530
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	GATA transcription factor 16-like
Location	Cma_Chr17: 1943280 .. 1944501 (+)
RNA-Seq Expression	CmaCh17G003530
Synteny	CmaCh17G003530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTTATCCGGTTGTATATTAAGTCGGTTTTTTTCTAACCTAAAGCGGCTGCTAAACCGCGAGCTTCTGTCGGTTCGATTCTTCATCATCATCTTCTTCCTGATCTCGATCTTCTTCTTCTCTCTTTCTTCGTGTCACTGATTGTTCTCACTCTGTTCTTTCTCTCTCTCCCTGCATGTCGGTTTCATCTTTTTCGTCTTGCAGATTTCGATTATCTCCTTTTTCACTGTTGTAGTAGTTTCTGTTCATCACATTTTCTGTTCCAGTATTGATTGTCGACTGCCTTTGTTCGTCTGATCTTCTGTTCAAGCTATCATTTACTTCGTTCGAATTCGATTTTATGACTCCAATTCGTCTCCACCGCTTTCAATCGTCAATATCCACTTTCCACTTCGAGTTTCCGTGCTTATTTTCTCGTTTCATCTCAGATCTCTGAGATTTCTACTGAGAATGATGGATCCGATGGAGGAAGTGAGTGATCGCGATTCTCGAGCCTGTTCTTGAGTTGATTTTATTTCTGATCTTGAAATTAAAGAGTACTGATTCTACTGTACTGTACTGGAAAATAGGGATCGGAGTTCAAGGACGCCGAAAACTCTTCGAGGATGTCTTCGCCAGCGGAAAGTGAGCAGAATAAGAAAACCTGCGCCGATTGCGGTACGACGAAGACTCCTCTCTGGCGTGGAGGTCCAGCCGGCCCTAAGGTGATTTGTTCATCTCCATCTCTCTATTTGTTCGAATCTTTTGTTTAGTTCTTCATTTCTGTTACTCGATTACTACGATCAGAGCTTCATTTTTCCTTTTTTTTTTTTTTTTTTTCAGTCTCTTTGCAATGCGTGTGGGATCAGAAGCAGGAAAAAGAGAAGATCGCTTCTAGGTTTAAACAGAGGAAGCGAAGCGGAGAGAAAAAGCAAGGGGAGCAGTAACAGAAACAGTAATGGCGGTGGAAATCAAGCAAAATTGGGCGGAGATAGCTTGAAATGGAGATCAACAGCGTTTGGTAGAAAAGATTTAATGCAAAGGAGACAGTTGGGTGAGGAAGAACAAGCTGCTGTTTTACTAATGGCTCTTTCTTATGGATCTGTTTATGCCTGAAATTCTCATATATTGGAATAGCCTTTTTTTTTAGCTTTATGATTTCTAGAGTCCTTAACCTTCAACTGTAATGTAGCATTTGCTTCTTCAATGGGTTGATTCTCTCTTTTTTTTCTGTAATTGCTTT

mRNA sequence

TCGTTATCCGGTTGTATATTAAGTCGGTTTTTTTCTAACCTAAAGCGGCTGCTAAACCGCGAGCTTCTGTCGGTTCGATTCTTCATCATCATCTTCTTCCTGATCTCGATCTTCTTCTTCTCTCTTTCTTCGTGTCACTGATTGTTCTCACTCTGTTCTTTCTCTCTCTCCCTGCATGTCGGTTTCATCTTTTTCGTCTTGCAGATTTCGATTATCTCCTTTTTCACTGTTGTAGTAGTTTCTGTTCATCACATTTTCTGTTCCAGTATTGATTGTCGACTGCCTTTGTTCGTCTGATCTTCTGTTCAAGCTATCATTTACTTCGTTCGAATTCGATTTTATGACTCCAATTCGTCTCCACCGCTTTCAATCGTCAATATCCACTTTCCACTTCGAGTTTCCGTGCTTATTTTCTCGTTTCATCTCAGATCTCTGAGATTTCTACTGAGAATGATGGATCCGATGGAGGAAGGATCGGAGTTCAAGGACGCCGAAAACTCTTCGAGGATGTCTTCGCCAGCGGAAAGTGAGCAGAATAAGAAAACCTGCGCCGATTGCGGTACGACGAAGACTCCTCTCTGGCGTGGAGGTCCAGCCGGCCCTAAGTCTCTTTGCAATGCGTGTGGGATCAGAAGCAGGAAAAAGAGAAGATCGCTTCTAGGTTTAAACAGAGGAAGCGAAGCGGAGAGAAAAAGCAAGGGGAGCAGTAACAGAAACAGTAATGGCGGTGGAAATCAAGCAAAATTGGGCGGAGATAGCTTGAAATGGAGATCAACAGCGTTTGGTAGAAAAGATTTAATGCAAAGGAGACAGTTGGGTGAGGAAGAACAAGCTGCTGTTTTACTAATGGCTCTTTCTTATGGATCTGTTTATGCCTGAAATTCTCATATATTGGAATAGCCTTTTTTTTTAGCTTTATGATTTCTAGAGTCCTTAACCTTCAACTGTAATGTAGCATTTGCTTCTTCAATGGGTTGATTCTCTCTTTTTTTTCTGTAATTGCTTT

Coding sequence (CDS)

ATGATGGATCCGATGGAGGAAGGATCGGAGTTCAAGGACGCCGAAAACTCTTCGAGGATGTCTTCGCCAGCGGAAAGTGAGCAGAATAAGAAAACCTGCGCCGATTGCGGTACGACGAAGACTCCTCTCTGGCGTGGAGGTCCAGCCGGCCCTAAGTCTCTTTGCAATGCGTGTGGGATCAGAAGCAGGAAAAAGAGAAGATCGCTTCTAGGTTTAAACAGAGGAAGCGAAGCGGAGAGAAAAAGCAAGGGGAGCAGTAACAGAAACAGTAATGGCGGTGGAAATCAAGCAAAATTGGGCGGAGATAGCTTGAAATGGAGATCAACAGCGTTTGGTAGAAAAGATTTAATGCAAAGGAGACAGTTGGGTGAGGAAGAACAAGCTGCTGTTTTACTAATGGCTCTTTCTTATGGATCTGTTTATGCCTGA

Protein sequence

MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRRQLGEEEQAAVLLMALSYGSVYA

Homology

[Close]

BLAST of CmaCh17G003530 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.7e-25
Identity = 79/140 (56.43%), Postives = 93/140 (66.43%), Query Frame = 0


Query: 16  NSSRMSSPAES--EQN-------KKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKR 75
           +S  M + AE   EQN       KKTCADCGT+KTPLWRGGP GPKSLCNACGIR+RKKR
Sbjct: 12  DSETMKTRAEDMIEQNNTSVNDKKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKR 71

Query: 76  RSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDL----MQRRQL 135
           R       G+E  +K K    ++S+GGGN  +  G+SLK      G +       QR++L
Sbjct: 72  RG------GTEDNKKLK----KSSSGGGN--RKFGESLKQSLMDLGIRKRSTVEKQRQKL 131

Query: 136 GEEEQAAVLLMALSYGSVYA 143
           GEEEQAAVLLMALSYGSVYA
Sbjct: 132 GEEEQAAVLLMALSYGSVYA 139

[Close]

BLAST of CmaCh17G003530 vs. ExPASy Swiss-Prot
Match: Q8LG10 (GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 4.8e-25
Identity = 88/162 (54.32%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 1   MMDPME-----EGSEFK----DA--ENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPA 60
           M+DP E     E  E K    DA  E+SS  S+ A S + KK+CA CGT+KTPLWRGGPA
Sbjct: 1   MLDPTEKVIDSESMESKLTSVDAIEEHSSSSSNEAISNE-KKSCAICGTSKTPLWRGGPA 60

Query: 61  GPKSLCNACGIRSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRST 120
           GPKSLCNACGIR+RKKRR+L+     + +E K K S NRN           GDSLK R  
Sbjct: 61  GPKSLCNACGIRNRKKRRTLI----SNRSEDKKKKSHNRNPK--------FGDSLKQRLM 120

Query: 121 AFGRKDLMQ--------RRQLGEEEQAAVLLMALSY-GSVYA 143
             GR+ +MQ        R +LGEEEQAAVLLMALSY  SVYA
Sbjct: 121 ELGREVMMQRSTAENQRRNKLGEEEQAAVLLMALSYASSVYA 149

[Close]

BLAST of CmaCh17G003530 vs. ExPASy Swiss-Prot
Match: Q9LIB5 (GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 7.4e-18
Identity = 71/182 (39.01%), Postives = 90/182 (49.45%), Query Frame = 0


Query: 5   MEEGSEFKDAEN----SSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 64
           ++   E  D +N    SS     + S   K+TC DCGT +TPLWRGGPAGPKSLCNACGI
Sbjct: 12  LDSAGELSDVDNENCSSSGSGGGSSSGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGI 71

Query: 65  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAK---------------------- 124
           +SRKKR++ LG+ R  E ++  K + N + N     AK                      
Sbjct: 72  KSRKKRQAALGM-RSEEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICN 131

Query: 125 ------------------LGGDSLKWRSTAFGRKDLMQRRQLGEEEQAAVLLMALSYGSV 143
                             LG      + +A  +K L   R+LGEEE+AAVLLMALS  SV
Sbjct: 132 NKRSSSSSSNKGVSKFLDLGFKVPVMKRSAVEKKRLW--RKLGEEERAAVLLMALSCSSV 190

[Close]

BLAST of CmaCh17G003530 vs. ExPASy Swiss-Prot
Match: Q8LC59 (GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 2.9e-14
Identity = 53/119 (44.54%), Postives = 70/119 (58.82%), Query Frame = 0


Query: 25  ESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRS-LLGLNRGSEAERKSK 84
           E +   + C++C TTKTP+WRGGP GPKSLCNACGIR RK+RRS LLG++      R  K
Sbjct: 20  EEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSELLGIH----IIRSHK 79

Query: 85  GSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRRQLGEEEQAAVLLMALSYGSVYA 143
             +++  N                S++ G   + +RR L EEEQAA+ L+ LS  SV A
Sbjct: 80  SLASKKIN--------------LLSSSHGGVAVKKRRSLKEEEQAALCLLLLSCSSVLA 120

[Close]

BLAST of CmaCh17G003530 vs. ExPASy Swiss-Prot
Match: Q6YW48 (Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CGA1 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.3e-10
Identity = 36/74 (48.65%), Postives = 45/74 (60.81%), Query Frame = 0


Query: 31  KTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRG--SEAERKSKGSSNR 90
           + C+DC TTKTPLWR GP GPKSLCNACGIR RK RR++     G  + A  KS  ++  
Sbjct: 176 RVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARRAMAAAANGGAAVAPAKSVAAAPV 235

Query: 91  NSNGGGNQAKLGGD 103
           N+     + K   D
Sbjct: 236 NNKPAAKKEKRAAD 249

[Close]

BLAST of CmaCh17G003530 vs. ExPASy TrEMBL
Match: A0A6J1KXU7 (GATA transcription factor 16-like OS=Cucurbita maxima OX=3661 GN=LOC111499182 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.5e-69
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60
           MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI
Sbjct: 1   MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60

Query: 61  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR 120
           RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR
Sbjct: 61  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR 120

Query: 121 QLGEEEQAAVLLMALSYGSVYA 143
           QLGEEEQAAVLLMALSYGSVYA
Sbjct: 121 QLGEEEQAAVLLMALSYGSVYA 142

[Close]

BLAST of CmaCh17G003530 vs. ExPASy TrEMBL
Match: A0A6J1H3T1 (GATA transcription factor 16-like OS=Cucurbita moschata OX=3662 GN=LOC111460239 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.3e-67
Identity = 139/142 (97.89%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60
           MMD +EEGSEFKDAENS RMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI
Sbjct: 1   MMDLIEEGSEFKDAENSPRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60

Query: 61  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR 120
           RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR
Sbjct: 61  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR 120

Query: 121 QLGEEEQAAVLLMALSYGSVYA 143
           QLGEEEQAAVLLMALSYGSVYA
Sbjct: 121 QLGEEEQAAVLLMALSYGSVYA 142

[Close]

BLAST of CmaCh17G003530 vs. ExPASy TrEMBL
Match: A0A6J1CD73 (GATA transcription factor 16-like OS=Momordica charantia OX=3673 GN=LOC111009666 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.3e-61
Identity = 126/142 (88.73%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60
           MMDP+EEGSEFKDA  S R +SPAESEQN+KTCADCGTTKTPLWRGGPAGPKSLCNACGI
Sbjct: 1   MMDPIEEGSEFKDAGRSPRKASPAESEQNRKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60

Query: 61  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR 120
           RSRKKRRSLLGLNRGSE ERK+KGSSNR SNGGGNQAK+GGD+LKWR  AFGR++LMQRR
Sbjct: 61  RSRKKRRSLLGLNRGSEVERKNKGSSNRTSNGGGNQAKIGGDNLKWRLMAFGREELMQRR 120

Query: 121 QLGEEEQAAVLLMALSYGSVYA 143
           QLGEEEQAAVLLMALSYGSVYA
Sbjct: 121 QLGEEEQAAVLLMALSYGSVYA 142

[Close]

BLAST of CmaCh17G003530 vs. ExPASy TrEMBL
Match: A0A0A0KG76 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G312540 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 9.9e-58
Identity = 124/143 (86.71%), Postives = 131/143 (91.61%), Query Frame = 0


Query: 1   MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60
           MMDP+EEGSEFKDA      +SP ESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI
Sbjct: 1   MMDPIEEGSEFKDAGK----TSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60

Query: 61  RSRKKRRSLLGLNRGSEAERKSKGSS-NRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQR 120
           RSRKKRRSLLGLNRG E ERK+KGSS NRN+NGGGNQ K+GG+SLKWRS AFGRK+LMQR
Sbjct: 61  RSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGESLKWRSMAFGRKELMQR 120

Query: 121 RQLGEEEQAAVLLMALSYGSVYA 143
           RQLGEEEQAAVLLMALSYGSVYA
Sbjct: 121 RQLGEEEQAAVLLMALSYGSVYA 139

[Close]

BLAST of CmaCh17G003530 vs. ExPASy TrEMBL
Match: A0A5D3BXI1 (GATA transcription factor 16-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00160 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.9e-57
Identity = 123/143 (86.01%), Postives = 130/143 (90.91%), Query Frame = 0


Query: 1   MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60
           MMDP+EEGSEFKDA      +SP ESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI
Sbjct: 1   MMDPIEEGSEFKDAGK----TSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60

Query: 61  RSRKKRRSLLGLNRGSEAERKSKGSS-NRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQR 120
           RSRKKRRSLLGLNRG E ERK+KGSS NRN+NGGGNQ K+GG+SLKWRS AFGRK+LMQR
Sbjct: 61  RSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGESLKWRSMAFGRKELMQR 120

Query: 121 RQLGEEEQAAVLLMALSYGSVYA 143
            QLGEEEQAAVLLMALSYGSVYA
Sbjct: 121 TQLGEEEQAAVLLMALSYGSVYA 139

[Close]

BLAST of CmaCh17G003530 vs. NCBI nr
Match: XP_023006466.1 (GATA transcription factor 16-like [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 3.0e-69
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60
           MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI
Sbjct: 1   MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60

Query: 61  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR 120
           RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR
Sbjct: 61  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR 120

Query: 121 QLGEEEQAAVLLMALSYGSVYA 143
           QLGEEEQAAVLLMALSYGSVYA
Sbjct: 121 QLGEEEQAAVLLMALSYGSVYA 142

[Close]

BLAST of CmaCh17G003530 vs. NCBI nr
Match: KAG6575092.1 (GATA transcription factor 15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268.5 bits (685), Expect = 3.4e-68
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60
           MMDP+EEGSEFKDAENS RMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI
Sbjct: 1   MMDPIEEGSEFKDAENSPRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60

Query: 61  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR 120
           RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR
Sbjct: 61  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR 120

Query: 121 QLGEEEQAAVLLMALSYGSVYA 143
           QLGEEEQAAVLLMALSYGSVYA
Sbjct: 121 QLGEEEQAAVLLMALSYGSVYA 142

[Close]

BLAST of CmaCh17G003530 vs. NCBI nr
Match: XP_023548663.1 (GATA transcription factor 16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.8 bits (678), Expect = 2.2e-67
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60
           MMDP+EEGSEFKDAENS RMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI
Sbjct: 1   MMDPIEEGSEFKDAENSPRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60

Query: 61  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR 120
           RSRKKRRSLLGLNRGSE ERKSKGSSNRNSNGGGNQAKLGGD+LKWRSTAFGRKDLMQRR
Sbjct: 61  RSRKKRRSLLGLNRGSEVERKSKGSSNRNSNGGGNQAKLGGDNLKWRSTAFGRKDLMQRR 120

Query: 121 QLGEEEQAAVLLMALSYGSVYA 143
           QLGEEEQAAVLLMALSYGSVYA
Sbjct: 121 QLGEEEQAAVLLMALSYGSVYA 142

[Close]

BLAST of CmaCh17G003530 vs. NCBI nr
Match: XP_022959167.1 (GATA transcription factor 16-like [Cucurbita moschata] >KAG7013665.1 GATA transcription factor 15 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264.6 bits (675), Expect = 4.9e-67
Identity = 139/142 (97.89%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60
           MMD +EEGSEFKDAENS RMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI
Sbjct: 1   MMDLIEEGSEFKDAENSPRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60

Query: 61  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR 120
           RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR
Sbjct: 61  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR 120

Query: 121 QLGEEEQAAVLLMALSYGSVYA 143
           QLGEEEQAAVLLMALSYGSVYA
Sbjct: 121 QLGEEEQAAVLLMALSYGSVYA 142

[Close]

BLAST of CmaCh17G003530 vs. NCBI nr
Match: XP_022138518.1 (GATA transcription factor 16-like [Momordica charantia])

HSP 1 Score: 244.2 bits (622), Expect = 6.8e-61
Identity = 126/142 (88.73%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MMDPMEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60
           MMDP+EEGSEFKDA  S R +SPAESEQN+KTCADCGTTKTPLWRGGPAGPKSLCNACGI
Sbjct: 1   MMDPIEEGSEFKDAGRSPRKASPAESEQNRKTCADCGTTKTPLWRGGPAGPKSLCNACGI 60

Query: 61  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRR 120
           RSRKKRRSLLGLNRGSE ERK+KGSSNR SNGGGNQAK+GGD+LKWR  AFGR++LMQRR
Sbjct: 61  RSRKKRRSLLGLNRGSEVERKNKGSSNRTSNGGGNQAKIGGDNLKWRLMAFGREELMQRR 120

Query: 121 QLGEEEQAAVLLMALSYGSVYA 143
           QLGEEEQAAVLLMALSYGSVYA
Sbjct: 121 QLGEEEQAAVLLMALSYGSVYA 142

[Close]

BLAST of CmaCh17G003530 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 )

HSP 1 Score: 115.9 bits (289), Expect = 2.6e-26
Identity = 79/140 (56.43%), Postives = 93/140 (66.43%), Query Frame = 0


Query: 16  NSSRMSSPAES--EQN-------KKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKR 75
           +S  M + AE   EQN       KKTCADCGT+KTPLWRGGP GPKSLCNACGIR+RKKR
Sbjct: 12  DSETMKTRAEDMIEQNNTSVNDKKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKR 71

Query: 76  RSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDL----MQRRQL 135
           R       G+E  +K K    ++S+GGGN  +  G+SLK      G +       QR++L
Sbjct: 72  RG------GTEDNKKLK----KSSSGGGN--RKFGESLKQSLMDLGIRKRSTVEKQRQKL 131

Query: 136 GEEEQAAVLLMALSYGSVYA 143
           GEEEQAAVLLMALSYGSVYA
Sbjct: 132 GEEEQAAVLLMALSYGSVYA 139

[Close]

BLAST of CmaCh17G003530 vs. TAIR 10
Match: AT3G06740.1 (GATA transcription factor 15 )

HSP 1 Score: 115.5 bits (288), Expect = 3.4e-26
Identity = 88/162 (54.32%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 1   MMDPME-----EGSEFK----DA--ENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPA 60
           M+DP E     E  E K    DA  E+SS  S+ A S + KK+CA CGT+KTPLWRGGPA
Sbjct: 1   MLDPTEKVIDSESMESKLTSVDAIEEHSSSSSNEAISNE-KKSCAICGTSKTPLWRGGPA 60

Query: 61  GPKSLCNACGIRSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAKLGGDSLKWRST 120
           GPKSLCNACGIR+RKKRR+L+     + +E K K S NRN           GDSLK R  
Sbjct: 61  GPKSLCNACGIRNRKKRRTLI----SNRSEDKKKKSHNRNPK--------FGDSLKQRLM 120

Query: 121 AFGRKDLMQ--------RRQLGEEEQAAVLLMALSY-GSVYA 143
             GR+ +MQ        R +LGEEEQAAVLLMALSY  SVYA
Sbjct: 121 ELGREVMMQRSTAENQRRNKLGEEEQAAVLLMALSYASSVYA 149

[Close]

BLAST of CmaCh17G003530 vs. TAIR 10
Match: AT3G16870.1 (GATA transcription factor 17 )

HSP 1 Score: 91.7 bits (226), Expect = 5.2e-19
Identity = 71/182 (39.01%), Postives = 90/182 (49.45%), Query Frame = 0


Query: 5   MEEGSEFKDAEN----SSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGI 64
           ++   E  D +N    SS     + S   K+TC DCGT +TPLWRGGPAGPKSLCNACGI
Sbjct: 12  LDSAGELSDVDNENCSSSGSGGGSSSGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGI 71

Query: 65  RSRKKRRSLLGLNRGSEAERKSKGSSNRNSNGGGNQAK---------------------- 124
           +SRKKR++ LG+ R  E ++  K + N + N     AK                      
Sbjct: 72  KSRKKRQAALGM-RSEEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICN 131

Query: 125 ------------------LGGDSLKWRSTAFGRKDLMQRRQLGEEEQAAVLLMALSYGSV 143
                             LG      + +A  +K L   R+LGEEE+AAVLLMALS  SV
Sbjct: 132 NKRSSSSSSNKGVSKFLDLGFKVPVMKRSAVEKKRLW--RKLGEEERAAVLLMALSCSSV 190

[Close]

BLAST of CmaCh17G003530 vs. TAIR 10
Match: AT4G16141.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.4e-16
Identity = 69/190 (36.32%), Postives = 89/190 (46.84%), Query Frame = 0


Query: 5   MEEGSEFKDAENSSRMSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRK 64
           +E   +  D +N +  SS       KKTC DCGT++TPLWRGGPAGPKSLCNACGI+SRK
Sbjct: 12  LESAGDSSDVDNGN-CSSSGSGGDTKKTCVDCGTSRTPLWRGGPAGPKSLCNACGIKSRK 71

Query: 65  KRRSLLGLNRGSEAERKSKGSSN------------------------------------- 124
           KR++ LG+ R  + + KSK ++N                                     
Sbjct: 72  KRQAALGI-RQDDIKIKSKSNNNLGLESRNVKTGKGEPVNVKIAKCEPGIVKIAKGEPGN 131

Query: 125 ---------RNSNGGGNQAK----------LGGDSLKWRSTAFGRKDLMQRRQLGEEEQA 139
                     NS+   N  K           G      + +A  +K L   R+LGEEE+A
Sbjct: 132 VKNKIKRDPENSSSSNNNKKNVKRVGRFLDFGFKVPAMKRSAVEKKRLW--RKLGEEERA 191

[Close]

BLAST of CmaCh17G003530 vs. TAIR 10
Match: AT5G26930.1 (GATA transcription factor 23 )

HSP 1 Score: 79.7 bits (195), Expect = 2.1e-15
Identity = 53/119 (44.54%), Postives = 70/119 (58.82%), Query Frame = 0


Query: 25  ESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRS-LLGLNRGSEAERKSK 84
           E +   + C++C TTKTP+WRGGP GPKSLCNACGIR RK+RRS LLG++      R  K
Sbjct: 20  EEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSELLGIH----IIRSHK 79

Query: 85  GSSNRNSNGGGNQAKLGGDSLKWRSTAFGRKDLMQRRQLGEEEQAAVLLMALSYGSVYA 143
             +++  N                S++ G   + +RR L EEEQAA+ L+ LS  SV A
Sbjct: 80  SLASKKIN--------------LLSSSHGGVAVKKRRSLKEEEQAALCLLLLSCSSVLA 120

The following BLAST results are available for this feature:

BLAST of CmaCh17G003530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ10	3.7e-25	56.43	GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1	[more]
Q8LG10	4.8e-25	54.32	GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2	[more]
Q9LIB5	7.4e-18	39.01	GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1	[more]
Q8LC59	2.9e-14	44.54	GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2	[more]
Q6YW48	4.3e-10	48.65	Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. ...	[more]

BLAST of CmaCh17G003530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KXU7	1.5e-69	100.00	GATA transcription factor 16-like OS=Cucurbita maxima OX=3661 GN=LOC111499182 PE...	[more]
A0A6J1H3T1	2.3e-67	97.89	GATA transcription factor 16-like OS=Cucurbita moschata OX=3662 GN=LOC111460239 ...	[more]
A0A6J1CD73	3.3e-61	88.73	GATA transcription factor 16-like OS=Momordica charantia OX=3673 GN=LOC111009666...	[more]
A0A0A0KG76	9.9e-58	86.71	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G312540 P...	[more]
A0A5D3BXI1	4.9e-57	86.01	GATA transcription factor 16-like isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of CmaCh17G003530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006466.1	3.0e-69	100.00	GATA transcription factor 16-like [Cucurbita maxima]	[more]
KAG6575092.1	3.4e-68	98.59	GATA transcription factor 15, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023548663.1	2.2e-67	97.18	GATA transcription factor 16-like [Cucurbita pepo subsp. pepo]	[more]
XP_022959167.1	4.9e-67	97.89	GATA transcription factor 16-like [Cucurbita moschata] >KAG7013665.1 GATA transc...	[more]
XP_022138518.1	6.8e-61	88.73	GATA transcription factor 16-like [Momordica charantia]	[more]

BLAST of CmaCh17G003530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49300.1	2.6e-26	56.43	GATA transcription factor 16	[more]
AT3G06740.1	3.4e-26	54.32	GATA transcription factor 15	[more]
AT3G16870.1	5.2e-19	39.01	GATA transcription factor 17	[more]
AT4G16141.1	1.4e-16	36.32	GATA type zinc finger transcription factor family protein	[more]
AT5G26930.1	2.1e-15	44.54	GATA transcription factor 23	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 27..85 e-value: 5.5E-13 score: 59.2
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 33..67 e-value: 4.6E-17 score: 61.3
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 33..58
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 27..63 score: 12.545015
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 32..67 e-value: 2.95238E-13 score: 58.5382
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 27..96 e-value: 4.2E-17 score: 64.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..84
None	No IPR available	PANTHER	PTHR47172	OS01G0976800 PROTEIN	coord: 1..142
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 29..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G003530.1	CmaCh17G003530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding