CmaCh17G003400 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G003400
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-H2 finger protein ATL2-like
Location	Cma_Chr17: 1854226 .. 1854978 (+)
RNA-Seq Expression	CmaCh17G003400
Synteny	CmaCh17G003400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGACGACGACGATGACGGCGGCGGACTCTTCTCTCCGTCGTCCTTCAAAAGCTACGCTCTCAGCGGCAAAATTATGCTTGGCACAGTCATTGTGTTGTTATTTGTCGTTATCCTCATGATTTGTCTTCATCTCTATGTTCGATTATATCTCCTGTCCTCCAGCCGCCGACAATCCCGTAGCCACCGCCGCCGTCGCCGCCGTGTGCAGTTTGAATTCACAACGGAGCCTCGAATTGCCGCCGCTTCATCGCGTGGTTTGCCGCACTCGATTCTCAAAACCCTACCCGTTTTCGTTCACTCGATGAAACCCGACCCGGATCCGGTTTATTGTGCGGTTTGTTTATCGGAGTTTGAAGAGAATGAAATCGGGCGGACTATTCCCAAATGTAACCATAGCTTTCACGTGGGGTGTATTGATATGTGGTTTTACTCGCACGTGACCTGCCCGCTTTGTAGATCCGAGGTCAAACCCGAACCTGGATCCGAATCCGGCCCATCTGATGACCCGGTGGAGATAGTTCTTGATGTTTGCGAACCGGGTTCGAGATCTAGCGAGGATGAACCGGATCGTGAGTGTCCGGTTGAGATGGCGGCATCGGTGGAGCTGGTGGATGACGCGTCGAGGCCAGTAGCCGACACGTCGGAGACAACGACGAGTTTTATGAAATCGTTGTCTTTGAAAAGGATTCTAAGTAGAGATGCAACGGAACGGGATCTGGAGAAGGAGGAATCGGCGGCCGTTCGTTGA

mRNA sequence

ATGGCCGACGACGACGATGACGGCGGCGGACTCTTCTCTCCGTCGTCCTTCAAAAGCTACGCTCTCAGCGGCAAAATTATGCTTGGCACAGTCATTGTGTTGTTATTTGTCGTTATCCTCATGATTTGTCTTCATCTCTATGTTCGATTATATCTCCTGTCCTCCAGCCGCCGACAATCCCGTAGCCACCGCCGCCGTCGCCGCCGTGTGCAGTTTGAATTCACAACGGAGCCTCGAATTGCCGCCGCTTCATCGCGTGGTTTGCCGCACTCGATTCTCAAAACCCTACCCGTTTTCGTTCACTCGATGAAACCCGACCCGGATCCGGTTTATTGTGCGGTTTGTTTATCGGAGTTTGAAGAGAATGAAATCGGGCGGACTATTCCCAAATGTAACCATAGCTTTCACGTGGGGTGTATTGATATGTGGTTTTACTCGCACGTGACCTGCCCGCTTTGTAGATCCGAGGTCAAACCCGAACCTGGATCCGAATCCGGCCCATCTGATGACCCGGTGGAGATAGTTCTTGATGTTTGCGAACCGGGTTCGAGATCTAGCGAGGATGAACCGGATCGTGAGTGTCCGGTTGAGATGGCGGCATCGGTGGAGCTGGTGGATGACGCGTCGAGGCCAGTAGCCGACACGTCGGAGACAACGACGAGTTTTATGAAATCGTTGTCTTTGAAAAGGATTCTAAGTAGAGATGCAACGGAACGGGATCTGGAGAAGGAGGAATCGGCGGCCGTTCGTTGA

Coding sequence (CDS)

ATGGCCGACGACGACGATGACGGCGGCGGACTCTTCTCTCCGTCGTCCTTCAAAAGCTACGCTCTCAGCGGCAAAATTATGCTTGGCACAGTCATTGTGTTGTTATTTGTCGTTATCCTCATGATTTGTCTTCATCTCTATGTTCGATTATATCTCCTGTCCTCCAGCCGCCGACAATCCCGTAGCCACCGCCGCCGTCGCCGCCGTGTGCAGTTTGAATTCACAACGGAGCCTCGAATTGCCGCCGCTTCATCGCGTGGTTTGCCGCACTCGATTCTCAAAACCCTACCCGTTTTCGTTCACTCGATGAAACCCGACCCGGATCCGGTTTATTGTGCGGTTTGTTTATCGGAGTTTGAAGAGAATGAAATCGGGCGGACTATTCCCAAATGTAACCATAGCTTTCACGTGGGGTGTATTGATATGTGGTTTTACTCGCACGTGACCTGCCCGCTTTGTAGATCCGAGGTCAAACCCGAACCTGGATCCGAATCCGGCCCATCTGATGACCCGGTGGAGATAGTTCTTGATGTTTGCGAACCGGGTTCGAGATCTAGCGAGGATGAACCGGATCGTGAGTGTCCGGTTGAGATGGCGGCATCGGTGGAGCTGGTGGATGACGCGTCGAGGCCAGTAGCCGACACGTCGGAGACAACGACGAGTTTTATGAAATCGTTGTCTTTGAAAAGGATTCTAAGTAGAGATGCAACGGAACGGGATCTGGAGAAGGAGGAATCGGCGGCCGTTCGTTGA

Protein sequence

MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSHRRRRRRVQFEFTTEPRIAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFEENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDVCEPGSRSSEDEPDRECPVEMAASVELVDDASRPVADTSETTTSFMKSLSLKRILSRDATERDLEKEESAAVR

Homology

[Close]

BLAST of CmaCh17G003400 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.3e-41
Identity = 113/249 (45.38%), Postives = 145/249 (58.23%), Query Frame = 0


Query: 15  SSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSHRRRRRRVQFEF 74
           S  K+YA+SGKIML  +++L FVVILM+ LHLY R YLL + RR  R   R RR     F
Sbjct: 19  SGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFF 78

Query: 75  TTEPRIAAAS---SRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFEENEIGRTIPKC 134
           T +P  AA S   SRGL  +++K+LPVF  S +   DP+ CAVCLSEFEE+E GR +P C
Sbjct: 79  TADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNC 138

Query: 135 NHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLD-------VCEPGSR 194
            H+FHV CIDMWF+SH TCPLCRS V+   G ES  +    E+V+        V EP S 
Sbjct: 139 QHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSS 198

Query: 195 SS-EDEPD--------RECPVEMAASVEL--------VDDASRPVADTSETTTSFM-KSL 236
           S   DEP         RE      A++E+         D+ +R  +  S++  S M + L
Sbjct: 199 SGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQSFRSPMSRML 258

[Close]

BLAST of CmaCh17G003400 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.1e-28
Identity = 80/192 (41.67%), Postives = 110/192 (57.29%), Query Frame = 0


Query: 20  YALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSHRRR--RRRVQFEFTTE 79
           Y+L+GKIML +VI+L   VIL++C H Y R       RRQ+R  RRR            +
Sbjct: 22  YSLNGKIMLASVIILFVAVILILCFHSYARWLF----RRQNRRIRRRISAHLRSLAAARD 81

Query: 80  PRIAAASSRGLPHSILKTLPVFVHSMKPDPDPV-YCAVCLSEFEENEIGRTIPKCNHSFH 139
           P  +++S   L  ++L+ +P+FV+S+K    P+  C+VCLSEFEE++ GR +PKC H FH
Sbjct: 82  PTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFH 141

Query: 140 VGCIDMWFYSHVTCPLCRSEV-------KPEPGSESGPSDDPVEIVLDVCEPGSRSSEDE 199
           V CID WF S  +CPLCR+ V       +PEP +   PS  P+E      E GS SS DE
Sbjct: 142 VDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDT----EAGSSSSSDE 201

Query: 200 PDRECPVEMAAS 202
            +   P   + S
Sbjct: 202 SESSTPSSSSGS 205

[Close]

BLAST of CmaCh17G003400 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-27
Identity = 77/169 (45.56%), Postives = 97/169 (57.40%), Query Frame = 0


Query: 20  YALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSHRRRRRRVQFEFTTEPR 79
           YAL+GKIML +VIVL   VI+++C H Y R       RR +R  RRR R      +  PR
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLF----RRHNRRIRRRIRSHLRTLSASPR 81

Query: 80  IAAASSRGLPHSILKTLPVFVHSMKPDPDP---VYCAVCLSEFEENEIGRTIPKCNHSFH 139
                 + L  ++L  +P+FV+S K  P P     C+VCLSEFEE + GR +PKC HSFH
Sbjct: 82  -----DQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFH 141

Query: 140 VGCIDMWFYSHVTCPLCRSEVKP-----EPGSESGPSDDPVEIVLDVCE 181
           V CID WF S  TCPLCR+ V+P     E GS S  S  P+    + CE
Sbjct: 142 VDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSS--SSSPLTFPTEGCE 179

[Close]

BLAST of CmaCh17G003400 vs. ExPASy Swiss-Prot
Match: Q8LF65 (RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26
Identity = 68/155 (43.87%), Postives = 94/155 (60.65%), Query Frame = 0


Query: 27  MLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSHRRRRRRVQFEFTTEPRIAAASSR 86
           ML T I++L +VILM+ LHLY R YLL       RS    R      F T+P   +++  
Sbjct: 1   MLTTTILILLIVILMVSLHLYYRWYLL-------RSSPFNRTTAASTFFTDP---SSTPG 60

Query: 87  GLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFEENEIGRTIPKCNHSFHVGCIDMWFYS 146
           GL  SI+K+LP+F  S       + C+VCLSEF++NE GR +P C H+FHV CIDMWF+S
Sbjct: 61  GLNPSIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHS 120

Query: 147 HVTCPLCRSEVKPEPGSESGPSDDPVEIVLDVCEP 182
           H +CPLCRS+++P  G      D   E+ + + +P
Sbjct: 121 HSSCPLCRSQIEPFAGGVKSSMD---EVAISISDP 142

[Close]

BLAST of CmaCh17G003400 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.7e-20
Identity = 80/285 (28.07%), Postives = 130/285 (45.61%), Query Frame = 0


Query: 5   DDDGGGLFSPSSFKSY-----ALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQ 64
           ++DGG +   SS  S+     + +  ++L  ++ LL VV+ ++ LH Y R +   S +  
Sbjct: 3   EEDGGSMSVKSSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDF 62

Query: 65  SRS--HRRRRRRVQFEFTTEPRI-------------------AAASSRGLPHSILKTLPV 124
           S +  HRRRRRR +    T  RI                   A    +GL  S++ ++P+
Sbjct: 63  SAAARHRRRRRRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPL 122

Query: 125 FVH--SMKPDPDPVYCAVCLSEFEENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRS- 184
           FV+  + + + +   C +CL  +E  + GR +  C H FHV CIDMW  SH TCPLCRS 
Sbjct: 123 FVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSP 182

Query: 185 --------------------------EVKPEPGSESGPSDD-PVEIVLDVCEPGSRSSED 228
                                     ++ P   +ES  S D  V + L V E   ++ +D
Sbjct: 183 VLAAVSDEENLKLAVNAVEEEAEVRLQMSPAGENESNVSGDRRVSLSLSVMEDDLKTGDD 242

[Close]

BLAST of CmaCh17G003400 vs. ExPASy TrEMBL
Match: A0A6J1L074 (RING-H2 finger protein ATL2-like OS=Cucurbita maxima OX=3661 GN=LOC111499181 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 6.7e-134
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQS 60
           MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQS
Sbjct: 1   MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQS 60

Query: 61  RSHRRRRRRVQFEFTTEPRIAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFE 120
           RSHRRRRRRVQFEFTTEPRIAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFE
Sbjct: 61  RSHRRRRRRVQFEFTTEPRIAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFE 120

Query: 121 ENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDVCE 180
           ENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDVCE
Sbjct: 121 ENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDVCE 180

Query: 181 PGSRSSEDEPDRECPVEMAASVELVDDASRPVADTSETTTSFMKSLSLKRILSRDATERD 240
           PGSRSSEDEPDRECPVEMAASVELVDDASRPVADTSETTTSFMKSLSLKRILSRDATERD
Sbjct: 181 PGSRSSEDEPDRECPVEMAASVELVDDASRPVADTSETTTSFMKSLSLKRILSRDATERD 240

Query: 241 LEKEESAAVR 251
           LEKEESAAVR
Sbjct: 241 LEKEESAAVR 250

[Close]

BLAST of CmaCh17G003400 vs. ExPASy TrEMBL
Match: A0A6J1H376 (RING-H2 finger protein ATL2-like OS=Cucurbita moschata OX=3662 GN=LOC111459976 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.3e-125
Identity = 236/249 (94.78%), Postives = 242/249 (97.19%), Query Frame = 0


Query: 2   ADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSR 61
           A+DDDDGGGLFSPSSFKSYALSGKIMLG VIVLLFVVILMICLHLYVRLYLLSSSRRQSR
Sbjct: 3   AEDDDDGGGLFSPSSFKSYALSGKIMLGAVIVLLFVVILMICLHLYVRLYLLSSSRRQSR 62

Query: 62  SHRRRRRRVQFEFTTEPRIAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFEE 121
           SHRRRRRRVQFEFTTEPRIAAASSRGLP SILK+LPVFVHSMKPDPDPVYCAVCLSEFEE
Sbjct: 63  SHRRRRRRVQFEFTTEPRIAAASSRGLPQSILKSLPVFVHSMKPDPDPVYCAVCLSEFEE 122

Query: 122 NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDVCEP 181
           NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPS+DPVE+VLDVCEP
Sbjct: 123 NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSNDPVELVLDVCEP 182

Query: 182 GSRSSEDEPDRECPVEMAASVELVDDASRPVADTSETTTSFMKSLSLKRILSRDATERDL 241
           GSRSSEDEP REC VEMAASVELVDD SRP AD SETTTSF+KSLSLKRILSRDAT+RDL
Sbjct: 183 GSRSSEDEPVRECLVEMAASVELVDDESRPAADMSETTTSFVKSLSLKRILSRDATKRDL 242

Query: 242 EKEESAAVR 251
           EKEESAAVR
Sbjct: 243 EKEESAAVR 251

[Close]

BLAST of CmaCh17G003400 vs. ExPASy TrEMBL
Match: A0A0A0KF25 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318710 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.3e-86
Identity = 179/246 (72.76%), Postives = 196/246 (79.67%), Query Frame = 0


Query: 1   MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQS 60
           MADDDDD   L+ P S+  YALSGKIMLG +I+LLFVVILMICLHLYVRL+LLSS+ R S
Sbjct: 1   MADDDDDASLLY-PPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPS 60

Query: 61  RSHRRRRRRVQFEFTTEPRIAAAS--SRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSE 120
           R  RRRRRR  F FT EPRIAAA   SRGLP SILK+LPVFVHS K DPDP+YCAVCLSE
Sbjct: 61  RI-RRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSE 120

Query: 121 FEENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDV 180
           FEENEIGR+IPKCNHSFHVGCIDMWFYSH TCPLCRSEVKPEP  ESGP DDP EI +DV
Sbjct: 121 FEENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDV 180

Query: 181 CEPGSRSSEDEPDRECPVEMAASVELVDDASRPVAD-----TSETTTSFMKSLSLKRILS 240
           CE GSRS E+E D  CPVEMAASVE+VDD SR V D     TS  T +F+KSLS+K  + 
Sbjct: 181 CELGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIE 240

[Close]

BLAST of CmaCh17G003400 vs. ExPASy TrEMBL
Match: A0A1S3C7X4 (RING-H2 finger protein ATL2-like OS=Cucumis melo OX=3656 GN=LOC103497834 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.7e-82
Identity = 178/248 (71.77%), Postives = 195/248 (78.63%), Query Frame = 0


Query: 1   MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSS-RRQ 60
           MADDDDD G LFSP S++ YALSGKIMLG +I+LLFVVILMICLHLYVRL+LLSSS  R 
Sbjct: 1   MADDDDD-GTLFSPPSYRRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSSTHRP 60

Query: 61  SRSH-RRRRRRVQFEFTTEPRIAAAS--SRGLPHSILKTLPVFVHSMKPDPDPVYCAVCL 120
           SRS  RRRRRR  F FT EPRIAAA   SRGLP SILK+LPVFVH  K DPDP+YCAVCL
Sbjct: 61  SRSRIRRRRRREHFVFTAEPRIAAAGAPSRGLPQSILKSLPVFVHLAKTDPDPIYCAVCL 120

Query: 121 SEFEENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVL 180
           SEFEENEIGR+IPKCNH FHVGCIDMWFYSHVTCPLCRSEVKPEPG  SGP     EI +
Sbjct: 121 SEFEENEIGRSIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPGCGSGPCG---EIAI 180

Query: 181 DVCEPGSRSSEDEPDRECPVEMAASVELVDDASRPVAD-----TSETTTSFMKSLSLKRI 240
           DV E GSRS E+E D  CPVEMAASVE+V+D SR V D     TS  T +F+KSLS+K  
Sbjct: 181 DVSEVGSRSGEEERDGGCPVEMAASVEVVEDESRHVNDMSDDGTSRATVNFVKSLSVKEE 240

[Close]

BLAST of CmaCh17G003400 vs. ExPASy TrEMBL
Match: A0A6J1CAT0 (RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111009784 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 4.1e-75
Identity = 176/282 (62.41%), Postives = 194/282 (68.79%), Query Frame = 0


Query: 1   MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQS 60
           MADDDDD  G FSP S+K YALSGKIMLG +IVLLFVVILMICLHLYVRLYLLSS+RRQ+
Sbjct: 1   MADDDDD--GFFSPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQA 60

Query: 61  RSHRRRRRRVQFEFTTEPR---IAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLS 120
              RRR RR  F FT EPR    AAA SRGLP SILK+LPVFVHS KPDPDP+ CAVCLS
Sbjct: 61  -PRRRRHRRAHFVFTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLS 120

Query: 121 EFEENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLD 180
           EFEENEIGR IPKC HSFHVGCIDMWFYSHVTCPLCRSEV+PE GS++ P         D
Sbjct: 121 EFEENEIGRIIPKCKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPD 180

Query: 181 VCEP----GSRSSEDEPDRECPVEMAASVELV---------DDASRPVAD-----TSETT 240
           + EP    GS  S +EP    P E+ + VELV         ++  R + D     TS TT
Sbjct: 181 IPEPGPSSGSTRSGEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTT 240

Query: 241 TSFMKSLSLKRILSRD-----------ATERDLEKEESAAVR 251
            +F+KSLS KRIL RD             ERDLEKEE  A R
Sbjct: 241 ANFVKSLSFKRILCRDKRDGVSPSENATEERDLEKEEIEAAR 279

[Close]

BLAST of CmaCh17G003400 vs. NCBI nr
Match: XP_023006465.1 (RING-H2 finger protein ATL2-like [Cucurbita maxima])

HSP 1 Score: 486.5 bits (1251), Expect = 1.4e-133
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQS 60
           MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQS
Sbjct: 1   MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQS 60

Query: 61  RSHRRRRRRVQFEFTTEPRIAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFE 120
           RSHRRRRRRVQFEFTTEPRIAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFE
Sbjct: 61  RSHRRRRRRVQFEFTTEPRIAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFE 120

Query: 121 ENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDVCE 180
           ENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDVCE
Sbjct: 121 ENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDVCE 180

Query: 181 PGSRSSEDEPDRECPVEMAASVELVDDASRPVADTSETTTSFMKSLSLKRILSRDATERD 240
           PGSRSSEDEPDRECPVEMAASVELVDDASRPVADTSETTTSFMKSLSLKRILSRDATERD
Sbjct: 181 PGSRSSEDEPDRECPVEMAASVELVDDASRPVADTSETTTSFMKSLSLKRILSRDATERD 240

Query: 241 LEKEESAAVR 251
           LEKEESAAVR
Sbjct: 241 LEKEESAAVR 250

[Close]

BLAST of CmaCh17G003400 vs. NCBI nr
Match: XP_022958821.1 (RING-H2 finger protein ATL2-like [Cucurbita moschata])

HSP 1 Score: 457.2 bits (1175), Expect = 9.0e-125
Identity = 236/249 (94.78%), Postives = 242/249 (97.19%), Query Frame = 0


Query: 2   ADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSR 61
           A+DDDDGGGLFSPSSFKSYALSGKIMLG VIVLLFVVILMICLHLYVRLYLLSSSRRQSR
Sbjct: 3   AEDDDDGGGLFSPSSFKSYALSGKIMLGAVIVLLFVVILMICLHLYVRLYLLSSSRRQSR 62

Query: 62  SHRRRRRRVQFEFTTEPRIAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFEE 121
           SHRRRRRRVQFEFTTEPRIAAASSRGLP SILK+LPVFVHSMKPDPDPVYCAVCLSEFEE
Sbjct: 63  SHRRRRRRVQFEFTTEPRIAAASSRGLPQSILKSLPVFVHSMKPDPDPVYCAVCLSEFEE 122

Query: 122 NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDVCEP 181
           NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPS+DPVE+VLDVCEP
Sbjct: 123 NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSNDPVELVLDVCEP 182

Query: 182 GSRSSEDEPDRECPVEMAASVELVDDASRPVADTSETTTSFMKSLSLKRILSRDATERDL 241
           GSRSSEDEP REC VEMAASVELVDD SRP AD SETTTSF+KSLSLKRILSRDAT+RDL
Sbjct: 183 GSRSSEDEPVRECLVEMAASVELVDDESRPAADMSETTTSFVKSLSLKRILSRDATKRDL 242

Query: 242 EKEESAAVR 251
           EKEESAAVR
Sbjct: 243 EKEESAAVR 251

[Close]

BLAST of CmaCh17G003400 vs. NCBI nr
Match: KAG7013653.1 (RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 453.0 bits (1164), Expect = 1.7e-123
Identity = 233/249 (93.57%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 2   ADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSR 61
           A+DDDDGGGLFSPSSFKSYALSGKIMLG VIVLLFVVILMICLHLYVRLYLLSSSRRQSR
Sbjct: 3   AEDDDDGGGLFSPSSFKSYALSGKIMLGAVIVLLFVVILMICLHLYVRLYLLSSSRRQSR 62

Query: 62  SHRRRRRRVQFEFTTEPRIAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFEE 121
           SHRRRRRRVQFEF  EPRIAAASSRGLP SILK+LPVFVHSMKPDPDPVYCAVCLSEFEE
Sbjct: 63  SHRRRRRRVQFEFPMEPRIAAASSRGLPQSILKSLPVFVHSMKPDPDPVYCAVCLSEFEE 122

Query: 122 NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDVCEP 181
           NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPS+DPVE+VLDVCEP
Sbjct: 123 NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSNDPVELVLDVCEP 182

Query: 182 GSRSSEDEPDRECPVEMAASVELVDDASRPVADTSETTTSFMKSLSLKRILSRDATERDL 241
           GSRSSEDEP RECPVEMAASVE+VDD SRPVA  SETTTSF+KSLSLKRILSRDAT+RDL
Sbjct: 183 GSRSSEDEPVRECPVEMAASVEMVDDESRPVAGMSETTTSFVKSLSLKRILSRDATKRDL 242

Query: 242 EKEESAAVR 251
           EKEESA VR
Sbjct: 243 EKEESAVVR 251

[Close]

BLAST of CmaCh17G003400 vs. NCBI nr
Match: KAG6575079.1 (RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 452.6 bits (1163), Expect = 2.2e-123
Identity = 234/249 (93.98%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 2   ADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSR 61
           A+DDDDGGGLFSPSSFKSYALSGKIMLG VIVLLFVVILMICLHLYVRLYLLSSSRRQSR
Sbjct: 3   AEDDDDGGGLFSPSSFKSYALSGKIMLGAVIVLLFVVILMICLHLYVRLYLLSSSRRQSR 62

Query: 62  SHRRRRRRVQFEFTTEPRIAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFEE 121
           SHRRRRRRVQFEF  EPRIAAASSRGLP SILK+LPVFVHSMKPDPDPVYCAVCLSEFEE
Sbjct: 63  SHRRRRRRVQFEFRMEPRIAAASSRGLPQSILKSLPVFVHSMKPDPDPVYCAVCLSEFEE 122

Query: 122 NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDVCEP 181
           NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPS+DPVE+VLDVCEP
Sbjct: 123 NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSNDPVELVLDVCEP 182

Query: 182 GSRSSEDEPDRECPVEMAASVELVDDASRPVADTSETTTSFMKSLSLKRILSRDATERDL 241
           GSRSSEDEP REC VEMAASVELVDD SRP AD SETTTSF+KSLSLKRILSRDAT+RDL
Sbjct: 183 GSRSSEDEPVRECLVEMAASVELVDDESRPAADMSETTTSFVKSLSLKRILSRDATKRDL 242

Query: 242 EKEESAAVR 251
           EKEESAAVR
Sbjct: 243 EKEESAAVR 251

[Close]

BLAST of CmaCh17G003400 vs. NCBI nr
Match: XP_023548720.1 (RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 449.9 bits (1156), Expect = 1.4e-122
Identity = 236/250 (94.40%), Postives = 241/250 (96.40%), Query Frame = 0


Query: 2   ADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSR 61
           A+DDDDGGGLFSPSSFKSYALSGKIMLG VIVLLFVVILMICLHLYVRLYLLSSSRRQSR
Sbjct: 3   AEDDDDGGGLFSPSSFKSYALSGKIMLGAVIVLLFVVILMICLHLYVRLYLLSSSRRQSR 62

Query: 62  SH-RRRRRRVQFEFTTEPRIAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFE 121
           SH RRRRRRVQFEFTTEPRIAAASSRGLP SILK+LPVFVHSMKPDPDPVYCAVCLSEFE
Sbjct: 63  SHRRRRRRRVQFEFTTEPRIAAASSRGLPQSILKSLPVFVHSMKPDPDPVYCAVCLSEFE 122

Query: 122 ENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDVCE 181
           E+EIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKP PGSESGPS+DPVEIVLDVCE
Sbjct: 123 ESEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPVPGSESGPSNDPVEIVLDVCE 182

Query: 182 PGSRSSEDEPDRECPVEMAASVELVDDASRPVADTSETTTSFMKSLSLKRILSRDATERD 241
           PGSRSSEDEP RECPVEMAASVELVD   RPVAD SETTTSF+KSLSLKRILSRDATERD
Sbjct: 183 PGSRSSEDEPVRECPVEMAASVELVDVELRPVADMSETTTSFVKSLSLKRILSRDATERD 242

Query: 242 LEKEESAAVR 251
           LEKEESAAVR
Sbjct: 243 LEKEESAAVR 252

[Close]

BLAST of CmaCh17G003400 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 171.4 bits (433), Expect = 9.2e-43
Identity = 113/249 (45.38%), Postives = 145/249 (58.23%), Query Frame = 0


Query: 15  SSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSHRRRRRRVQFEF 74
           S  K+YA+SGKIML  +++L FVVILM+ LHLY R YLL + RR  R   R RR     F
Sbjct: 19  SGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFF 78

Query: 75  TTEPRIAAAS---SRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFEENEIGRTIPKC 134
           T +P  AA S   SRGL  +++K+LPVF  S +   DP+ CAVCLSEFEE+E GR +P C
Sbjct: 79  TADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNC 138

Query: 135 NHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLD-------VCEPGSR 194
            H+FHV CIDMWF+SH TCPLCRS V+   G ES  +    E+V+        V EP S 
Sbjct: 139 QHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSS 198

Query: 195 SS-EDEPD--------RECPVEMAASVEL--------VDDASRPVADTSETTTSFM-KSL 236
           S   DEP         RE      A++E+         D+ +R  +  S++  S M + L
Sbjct: 199 SGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQSFRSPMSRML 258

[Close]

BLAST of CmaCh17G003400 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 125.6 bits (314), Expect = 5.8e-29
Identity = 80/192 (41.67%), Postives = 110/192 (57.29%), Query Frame = 0


Query: 20  YALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSHRRR--RRRVQFEFTTE 79
           Y+L+GKIML +VI+L   VIL++C H Y R       RRQ+R  RRR            +
Sbjct: 22  YSLNGKIMLASVIILFVAVILILCFHSYARWLF----RRQNRRIRRRISAHLRSLAAARD 81

Query: 80  PRIAAASSRGLPHSILKTLPVFVHSMKPDPDPV-YCAVCLSEFEENEIGRTIPKCNHSFH 139
           P  +++S   L  ++L+ +P+FV+S+K    P+  C+VCLSEFEE++ GR +PKC H FH
Sbjct: 82  PTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFH 141

Query: 140 VGCIDMWFYSHVTCPLCRSEV-------KPEPGSESGPSDDPVEIVLDVCEPGSRSSEDE 199
           V CID WF S  +CPLCR+ V       +PEP +   PS  P+E      E GS SS DE
Sbjct: 142 VDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDT----EAGSSSSSDE 201

Query: 200 PDRECPVEMAAS 202
            +   P   + S
Sbjct: 202 SESSTPSSSSGS 205

[Close]

BLAST of CmaCh17G003400 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 9.8e-29
Identity = 77/169 (45.56%), Postives = 97/169 (57.40%), Query Frame = 0


Query: 20  YALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSHRRRRRRVQFEFTTEPR 79
           YAL+GKIML +VIVL   VI+++C H Y R       RR +R  RRR R      +  PR
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLF----RRHNRRIRRRIRSHLRTLSASPR 81

Query: 80  IAAASSRGLPHSILKTLPVFVHSMKPDPDP---VYCAVCLSEFEENEIGRTIPKCNHSFH 139
                 + L  ++L  +P+FV+S K  P P     C+VCLSEFEE + GR +PKC HSFH
Sbjct: 82  -----DQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFH 141

Query: 140 VGCIDMWFYSHVTCPLCRSEVKP-----EPGSESGPSDDPVEIVLDVCE 181
           V CID WF S  TCPLCR+ V+P     E GS S  S  P+    + CE
Sbjct: 142 VDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSS--SSSPLTFPTEGCE 179

[Close]

BLAST of CmaCh17G003400 vs. TAIR 10
Match: AT4G15975.1 (RING/U-box superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 3.2e-27
Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = 0


Query: 27  MLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSHRRRRRRVQFEFTTEPRIAAASSR 86
           ML T I++L +VILM+ LHLY R YLL       RS    R      F T+P   +++  
Sbjct: 1   MLTTTILILLIVILMVSLHLYYRWYLL-------RSSPFNRTTAASTFFTDP---SSTPG 60

Query: 87  GLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFEENEIGRTIPKCNHSFHVGCIDMWFYS 146
           GL  SI+K+LP+F  S       + C+VCLSEF++NE GR +P C H+FHV CIDMWF+S
Sbjct: 61  GLNPSIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWFHS 120

Query: 147 HVTCPLCRSEVKPEPGSESGPSDDPVEIVLDVCEP 182
           H +CPLCRS ++P  G      D   E+ + + +P
Sbjct: 121 HSSCPLCRSLIEPFAGGVKSTMD---EVAISISDP 142

[Close]

BLAST of CmaCh17G003400 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 100.1 bits (248), Expect = 2.6e-21
Identity = 80/285 (28.07%), Postives = 130/285 (45.61%), Query Frame = 0


Query: 5   DDDGGGLFSPSSFKSY-----ALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQ 64
           ++DGG +   SS  S+     + +  ++L  ++ LL VV+ ++ LH Y R +   S +  
Sbjct: 3   EEDGGSMSVKSSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDF 62

Query: 65  SRS--HRRRRRRVQFEFTTEPRI-------------------AAASSRGLPHSILKTLPV 124
           S +  HRRRRRR +    T  RI                   A    +GL  S++ ++P+
Sbjct: 63  SAAARHRRRRRRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPL 122

Query: 125 FVH--SMKPDPDPVYCAVCLSEFEENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRS- 184
           FV+  + + + +   C +CL  +E  + GR +  C H FHV CIDMW  SH TCPLCRS 
Sbjct: 123 FVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSP 182

Query: 185 --------------------------EVKPEPGSESGPSDD-PVEIVLDVCEPGSRSSED 228
                                     ++ P   +ES  S D  V + L V E   ++ +D
Sbjct: 183 VLAAVSDEENLKLAVNAVEEEAEVRLQMSPAGENESNVSGDRRVSLSLSVMEDDLKTGDD 242

The following BLAST results are available for this feature:

BLAST of CmaCh17G003400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9T5	1.3e-41	45.38	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q9LZJ6	8.1e-28	41.67	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
O22255	1.4e-27	45.56	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q8LF65	1.5e-26	43.87	RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2	[more]
Q9LUZ9	3.7e-20	28.07	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]

BLAST of CmaCh17G003400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L074	6.7e-134	100.00	RING-H2 finger protein ATL2-like OS=Cucurbita maxima OX=3661 GN=LOC111499181 PE=...	[more]
A0A6J1H376	4.3e-125	94.78	RING-H2 finger protein ATL2-like OS=Cucurbita moschata OX=3662 GN=LOC111459976 P...	[more]
A0A0A0KF25	2.3e-86	72.76	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318710 P...	[more]
A0A1S3C7X4	2.7e-82	71.77	RING-H2 finger protein ATL2-like OS=Cucumis melo OX=3656 GN=LOC103497834 PE=4 SV...	[more]
A0A6J1CAT0	4.1e-75	62.41	RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111009784 ...	[more]

BLAST of CmaCh17G003400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006465.1	1.4e-133	100.00	RING-H2 finger protein ATL2-like [Cucurbita maxima]	[more]
XP_022958821.1	9.0e-125	94.78	RING-H2 finger protein ATL2-like [Cucurbita moschata]	[more]
KAG7013653.1	1.7e-123	93.57	RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6575079.1	2.2e-123	93.98	RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023548720.1	1.4e-122	94.40	RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh17G003400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16720.1	9.2e-43	45.38	TOXICOS EN LEVADURA 2	[more]
AT3G62690.1	5.8e-29	41.67	AtL5	[more]
AT2G47560.1	9.8e-29	45.56	RING/U-box superfamily protein	[more]
AT4G15975.1	3.2e-27	43.87	RING/U-box superfamily protein	[more]
AT5G58580.1	2.6e-21	28.07	TOXICOS EN LEVADURA 63	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 112..153 e-value: 5.2E-6 score: 36.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 112..154 e-value: 4.3E-11 score: 43.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 112..154 score: 12.430266
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 75..160 e-value: 1.0E-17 score: 65.5
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 18..219
None	No IPR available	PANTHER	PTHR45768:SF34	RING-H2 FINGER PROTEIN ATL64	coord: 18..219
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 112..154 e-value: 2.8253E-17 score: 71.1871
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 95..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G003400.1	CmaCh17G003400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane