CmaCh17G002670 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGGCCTATAAATAAGGGATCAGCTCCCTTTTGAGCTTAAAGTGCTTCTATCATTGTTTAATTTCTCAGATCGTGGCAAATATGTTGGGCGTATTTAGCAGTTCGATTATATCGCCGCCGGACGAACTGGTGGCTGCCGGCTGCCGGACTCCGTCGCCGAAGATATCGTCCACGGCGCTGACGAAGCGGTTCGCGGATTCCAATACTGCCGCCGTCTCCCTCCAGATCGGTGACCATGTCCACCTCGCCTTCACTCACCACAACGAGTCTCCCTTGCGCCCCAGGTACTGGAGATTTTCCGTTCAAAACGCCGTTCTACGGCGGCGCTCTGTTTTTTCCTAAAAATCTTCTCTCTCTCTCTCTCTCTATATATATATTATTTTTTAAATAAAAAAGTACTAATGTGTAAAATTTAAATTTATGTATACTAGATCGATTAATTTCTAAAAATTATAAAAATATAATATAATAAGAATTATAAAATTTAAAATGATCACTTAAATATTTTTAAATGTATTAAAGTCAATAATAATCCTTATAAATTATGTCAAACAATTTACTAAATACAAAATTAATTCAAATATTAAGGGCCTAATTAATATAGAAGTGACCGCAAGGGTGTTTTTGTCATTTCACAGATTTATTATAAAACCGCCAAACGATAATTCCAGCATCCAGTGTTCCCGTAGTTTCTGGAAAGTGAAGCCATATTTATTTTATATTTTAAACTTTTAAAAAAATAAAAACCATACTTATTATGCCTTAAATTAAAAAAAAAATTAATTTATAAATTATATTGCTTTGCTTTAATCTCGGCAATTACTTTACTTATTATTATTTTTACAATATATGAGATCGTAATAAGTGTAATAATATCGTCATTTTTTGTTTTTTTTTTTTAATTATCTAAGCATAATTAATTATTAATCGAAAAATTTGTATTCAATCAAATTCTAAAATTTTTACTTTCAAATATTTTAAATTAATGAATTTAAAAAAATCGAATAAATCTATATAGACTAAAAATTAAAAGATTTATTTGATATTACTAATCTGCCCTTCCTTCCTAGAGTGGTATATTTTATAAGTGATCCAAAAAAAGCTAAATTAAATATTTAAGTATTTTTAAACAATATTAAAATTTATTGAACACGAAATAAAAAATATATAATTTATTACACTATTTTTAAAAAGGATAAAGATAAATATATACAAAATTTTAAGGTTGCAACTTAAGAAATAATTTTTTAAAGATAATATGCATTAAAAATCCAGTATTTTTCGATTTTTTTGAAAATGAAAATCCAAAAAAAAAACGCCATTGTAGATCGCTGGCAGTGAAGGAGGAGATCTTCTGCTTGTTCGAAGGAGCTCTAGACAATTTGGGGAGCTTGAGGAACCAATACGGCCTTCCCAAATCCACCAATGAAGTCATCCTGGTAATCGAAGCTTACAAAGCTCTTCGTGATCGAGCTCCATATCCGGTCGACCATGTCGTCGGCCATTTCAGCGGCAGCTTCGCATTCATCCTCTTCGACAACTCCACCTCCACCCTCTTCGTCGCCTCTGTAAGTCACTTCTCAGATTCTAATCTCCAAAATCGAAGTTAGAAAGTACTGATTTCTTGTTGATTTTGGTTTTTGCAGGATCAGTTCGGGAAGGTGCCTTTGTATTGGGGAATCACCGCTGATGGATACGTCGCGTTTGCCGATGATGCAGGTTTACTCAAAGGCGCTTGTGGAAAATCCCTTGCGTCGTTTCCACAAGGTACTTCGAAACTCGGCGCGATTTTCATGGATTAGAAAAATTAGGGCACGGATTCATCTGAATCGTTGTTTCAATTGCAGGCTGTTTCTACTCCACGGCGGTGGGAGAATTGAGATGCTACGAGAATCCGAAGAACAAGATAACTGCTGAACCTGCTCCTGAAGAAGAGATCTGGGGTGCAAAATTCAAGGTATGCGATTATTATACTCTCTTTTAATTGAATTAGAAAATGGGCGCAAAATTAGGCTTGGAAATTTGCTGATAGCGTCATTGTTCGAGTCAGTATGAGTATGAGTATGTGTGTCAAAATTCTTCCTCTGAGTGATGAACACAGCTGAAGATTCAAATTTTATGATTTAACATTGCACTTGATTACACCACAAAAAGGTAGAGAAAAATCACGCCCATAACCATGATCTTATCTCAATGGAACTGGAAAGTATTTTAGCCATAATAAAGAATTCACTATCTTTTGGACTGTGGATATCATAAAGTAGTGGATAAAGAACTAAATTCTATACCATACATAACATGATGAGACATTCACTTTGTAGGTCCTCACCCATTGAACAATTCTTCTAGCATCGATCTTCTTTTCCTTACTCTTCTTTCATATTCTGACTCTGTTTTGATCCAAAATAATGTTCTTTGAACCTTACATGATGAGTGATCCATCAAAATAATCGGATTTGGTATATGAAATTACATCCGAAGGAGTGAAAATGGACATTAAAAAGGTTAGTTCGTGCTTTTTTGAGAAACCCCACCAAGCTCATAATGTAGAACCTAATTTTAGATTTGCAAGTCAAGATCAATGAGAAAGATAATCACTGCAAGTTGGTTCAAATCATAGCGGTCAACTAGGATTCAATCTTCTAAGGATTAGGTAAAAAAGTTGTTAGGATGTGGATCCTGTTGTTTACTTATGGGTTAAGTAGTTTAAGTCTAAGATAGAATCTTATCTTATATTATTTATTCTCCTATCCCATGTAGTTTTCAAGATGGATTGTTGGTTTCTTATTTAGTTTTCATGGTAGAATACGTGTAACTACTGGAAGTCGTCTATAAATAAACCCTAGCTACTGTGAAGTTTTATATTTCGGTGTCTCCTTGCGTCTTCTCTCTTCTGTTGCCACCGTGAAGTTTTGCATTTCGGTGTCTCTATATTTCTCTTTGCGTCTTCTCTTTTTTGTTGCTACCGTGAAGTTTTGCATTTCAGTGTTTCCATAAGTCTCCTTGTGTCTTCTCTCTTTTGTTGCCATAGTGAACTTTTACATTTCGATGTCTCCATATTCTTCCTTGCGTCTTCTCTCGTGAAGTTTTACATTTCGGTGTTTCCATATTCCTCCTTGCGTCTTCTATCTTTTGTTCTCATGTTATTCGTCTAGATCGAGTGTGTAAGTTTTGCAAGCATAACATAAATTTCAACTAAAGAAGTAAAAACGGAACATTATATAAGTTGATTCTATCACTTTTGAGAAACCCCACCAAGCTCATAAAATCATTCTTATCGATTGTGTTATGATGGATGCTTGACTTTTCAGGTGGAGGGGCCAGCGGCTGTATCAGCCACAGGGTTCGGGTATCACAATTTCCCAATGGAGATTTCATAGAACTATGCTGTATCAGGCATAGCGCAGTAACTTACACGGGGGAAGGTAAGAATGGTGTGCTTATTTTACTGTGCCGAATGGTTTGTTTGATTTCAAGGGGACTGTAAAACTGTAAATACGAGTCTTTGTGGTAGAAATTTGCTTGCTTTAGTTCTATAAAAGTGTCTACGATGTGTTCAAATAGTTTGTTCATTAAAAACCCTTTTGGAGTTCTGAAATCTTCTCTCTTTCCTTCGATTTCCATATGCCTTTCAACTATATAATTGTTGGGCCTTAGCTCATCTCAATGGGCTTATTGGGCCTCAATATGGGCCGAG CCGGCCTATAAATAAGGGATCAGCTCCCTTTTGAGCTTAAAGTGCTTCTATCATTGTTTAATTTCTCAGATCGTGGCAAATATGTTGGGCGTATTTAGCAGTTCGATTATATCGCCGCCGGACGAACTGGTGGCTGCCGGCTGCCGGACTCCGTCGCCGAAGATATCGTCCACGGCGCTGACGAAGCGGTTCGCGGATTCCAATACTGCCGCCGTCTCCCTCCAGATCGGTGACCATGTCCACCTCGCCTTCACTCACCACAACGAGTCTCCCTTGCGCCCCAGATCGCTGGCAGTGAAGGAGGAGATCTTCTGCTTGTTCGAAGGAGCTCTAGACAATTTGGGGAGCTTGAGGAACCAATACGGCCTTCCCAAATCCACCAATGAAGTCATCCTGGTAATCGAAGCTTACAAAGCTCTTCGTGATCGAGCTCCATATCCGGTCGACCATGTCGTCGGCCATTTCAGCGGCAGCTTCGCATTCATCCTCTTCGACAACTCCACCTCCACCCTCTTCGTCGCCTCTGATCAGTTCGGGAAGGTGCCTTTGTATTGGGGAATCACCGCTGATGGATACGTCGCGTTTGCCGATGATGCAGGTTTACTCAAAGGCGCTTGTGGAAAATCCCTTGCGTCGTTTCCACAAGGCTGTTTCTACTCCACGGCGGTGGGAGAATTGAGATGCTACGAGAATCCGAAGAACAAGATAACTGCTGAACCTGCTCCTGAAGAAGAGATCTGGGGTGCAAAATTCAAGGTGGAGGGGCCAGCGGCTGTATCAGCCACAGGGTTCGGGTATCACAATTTCCCAATGGAGATTTCATAGAACTATGCTGTATCAGGCATAGCGCAGTAACTTACACGGGGGAAGGTAAGAATGGTGTGCTTATTTTACTGTGCCGAATGGTTTGTTTGATTTCAAGGGGACTGTAAAACTGTAAATACGAGTCTTTGTGGTAGAAATTTGCTTGCTTTAGTTCTATAAAAGTGTCTACGATGTGTTCAAATAGTTTGTTCATTAAAAACCCTTTTGGAGTTCTGAAATCTTCTCTCTTTCCTTCGATTTCCATATGCCTTTCAACTATATAATTGTTGGGCCTTAGCTCATCTCAATGGGCTTATTGGGCCTCAATATGGGCCGAG ATGTTGGGCGTATTTAGCAGTTCGATTATATCGCCGCCGGACGAACTGGTGGCTGCCGGCTGCCGGACTCCGTCGCCGAAGATATCGTCCACGGCGCTGACGAAGCGGTTCGCGGATTCCAATACTGCCGCCGTCTCCCTCCAGATCGGTGACCATGTCCACCTCGCCTTCACTCACCACAACGAGTCTCCCTTGCGCCCCAGATCGCTGGCAGTGAAGGAGGAGATCTTCTGCTTGTTCGAAGGAGCTCTAGACAATTTGGGGAGCTTGAGGAACCAATACGGCCTTCCCAAATCCACCAATGAAGTCATCCTGGTAATCGAAGCTTACAAAGCTCTTCGTGATCGAGCTCCATATCCGGTCGACCATGTCGTCGGCCATTTCAGCGGCAGCTTCGCATTCATCCTCTTCGACAACTCCACCTCCACCCTCTTCGTCGCCTCTGATCAGTTCGGGAAGGTGCCTTTGTATTGGGGAATCACCGCTGATGGATACGTCGCGTTTGCCGATGATGCAGGTTTACTCAAAGGCGCTTGTGGAAAATCCCTTGCGTCGTTTCCACAAGGCTGTTTCTACTCCACGGCGGTGGGAGAATTGAGATGCTACGAGAATCCGAAGAACAAGATAACTGCTGAACCTGCTCCTGAAGAAGAGATCTGGGGTGCAAAATTCAAGGTGGAGGGGCCAGCGGCTGTATCAGCCACAGGGTTCGGGTATCACAATTTCCCAATGGAGATTTCATAG MLGVFSSSIISPPDELVAAGCRTPSPKISSTALTKRFADSNTAAVSLQIGDHVHLAFTHHNESPLRPRSLAVKEEIFCLFEGALDNLGSLRNQYGLPKSTNEVILVIEAYKALRDRAPYPVDHVVGHFSGSFAFILFDNSTSTLFVASDQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQGCFYSTAVGELRCYENPKNKITAEPAPEEEIWGAKFKVEGPAAVSATGFGYHNFPMEIS Homology
BLAST of CmaCh17G002670 vs. ExPASy Swiss-Prot
Match: P24805 (Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.1e-28 Identity = 66/149 (44.30%), Postives = 90/149 (60.40%), Query Frame = 0
BLAST of CmaCh17G002670 vs. ExPASy Swiss-Prot
Match: Q5ZJU3 (Asparagine synthetase [glutamine-hydrolyzing] OS=Gallus gallus OX=9031 GN=ASNS PE=2 SV=3) HSP 1 Score: 45.8 bits (107), Expect = 8.1e-04 Identity = 29/100 (29.00%), Postives = 47/100 (47.00%), Query Frame = 0
BLAST of CmaCh17G002670 vs. ExPASy TrEMBL
Match: A0A6J1L4X9 (stem-specific protein TSJT1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499168 PE=4 SV=1) HSP 1 Score: 505.4 bits (1300), Expect = 1.4e-139 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
BLAST of CmaCh17G002670 vs. ExPASy TrEMBL
Match: A0A6J1H4E0 (stem-specific protein TSJT1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460374 PE=4 SV=1) HSP 1 Score: 499.2 bits (1284), Expect = 9.9e-138 Identity = 243/247 (98.38%), Postives = 245/247 (99.19%), Query Frame = 0
BLAST of CmaCh17G002670 vs. ExPASy TrEMBL
Match: A0A1S3C892 (stem-specific protein TSJT1-like OS=Cucumis melo OX=3656 GN=LOC103497929 PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.3e-129 Identity = 227/247 (91.90%), Postives = 236/247 (95.55%), Query Frame = 0
BLAST of CmaCh17G002670 vs. ExPASy TrEMBL
Match: A0A0A0KDR1 (Glutamine amidotransferase type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G154500 PE=4 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 3.2e-128 Identity = 225/247 (91.09%), Postives = 234/247 (94.74%), Query Frame = 0
BLAST of CmaCh17G002670 vs. ExPASy TrEMBL
Match: A0A6J1CAR8 (stem-specific protein TSJT1-like OS=Momordica charantia OX=3673 GN=LOC111009531 PE=4 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 2.1e-127 Identity = 222/247 (89.88%), Postives = 235/247 (95.14%), Query Frame = 0
BLAST of CmaCh17G002670 vs. NCBI nr
Match: XP_023006443.1 (stem-specific protein TSJT1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 505.4 bits (1300), Expect = 2.8e-139 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
BLAST of CmaCh17G002670 vs. NCBI nr
Match: XP_022959387.1 (stem-specific protein TSJT1-like isoform X2 [Cucurbita moschata] >KAG6575011.1 Stem-specific protein TSJT1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013582.1 Stem-specific protein TSJT1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 499.2 bits (1284), Expect = 2.0e-137 Identity = 243/247 (98.38%), Postives = 245/247 (99.19%), Query Frame = 0
BLAST of CmaCh17G002670 vs. NCBI nr
Match: XP_023548563.1 (stem-specific protein TSJT1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 492.3 bits (1266), Expect = 2.5e-135 Identity = 243/248 (97.98%), Postives = 244/248 (98.39%), Query Frame = 0
BLAST of CmaCh17G002670 vs. NCBI nr
Match: XP_008458563.1 (PREDICTED: stem-specific protein TSJT1-like [Cucumis melo]) HSP 1 Score: 472.2 bits (1214), Expect = 2.7e-129 Identity = 227/247 (91.90%), Postives = 236/247 (95.55%), Query Frame = 0
BLAST of CmaCh17G002670 vs. NCBI nr
Match: XP_038874749.1 (stem-specific protein TSJT1-like [Benincasa hispida]) HSP 1 Score: 471.1 bits (1211), Expect = 5.9e-129 Identity = 227/247 (91.90%), Postives = 237/247 (95.95%), Query Frame = 0
BLAST of CmaCh17G002670 vs. TAIR 10
Match: AT5G19140.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 365.9 bits (938), Expect = 2.5e-101 Identity = 171/233 (73.39%), Postives = 198/233 (84.98%), Query Frame = 0
BLAST of CmaCh17G002670 vs. TAIR 10
Match: AT5G19140.2 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 332.8 bits (852), Expect = 2.4e-91 Identity = 159/233 (68.24%), Postives = 186/233 (79.83%), Query Frame = 0
BLAST of CmaCh17G002670 vs. TAIR 10
Match: AT5G43830.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 197.6 bits (501), Expect = 1.2e-50 Identity = 99/229 (43.23%), Postives = 142/229 (62.01%), Query Frame = 0
BLAST of CmaCh17G002670 vs. TAIR 10
Match: AT3G22850.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 181.0 bits (458), Expect = 1.1e-45 Identity = 92/236 (38.98%), Postives = 137/236 (58.05%), Query Frame = 0
BLAST of CmaCh17G002670 vs. TAIR 10
Match: AT3G15450.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 168.7 bits (426), Expect = 5.9e-42 Identity = 92/239 (38.49%), Postives = 136/239 (56.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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