CmaCh17G002530 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G002530
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Pentatricopeptide repeat (PPR) superfamily protein
Location	Cma_Chr17: 1302912 .. 1303661 (+)
RNA-Seq Expression	CmaCh17G002530
Synteny	CmaCh17G002530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCAATAGGCAGTGGTTGTAGTGTTCATGGATCAGCCTCATCAGAACCAAATTCCAGTCCTCGGATATCTTTCTCTTCTGAGTTTCTTGATGAAAACGACTTCATTTCCATCACTCCAAATTCACATCTAGAGAGAGAACAAGAGATTTCTGAGAGACAGAAGAAGGACAGATCAGAGAAGCTAGCATGGAGTGCTGATTTTGAGTTTCTTTCTAATAAAGTTAGTAGTCACTCCATGATTACAGCTGATGAGCTCTTCTATGAAGGGAAGCTTCTTCCCTTTTGGCACATGCAGCAAGCAGAGAGGCTTAACAAAATCAGTCTGAAATCTTCTAAAGATGTAGATAAACAAGGCTTGGTGGACATAGAGGTAAACAAGAAGGCAGAGAACAAAGTGAATTGGTTACTCGACGACGACCCGTCGCCGAGACCGCCAAAATGCACTGTTCTGTGGAAAGAATTGTTGAGGTTGAAGAAACAACGTGCGTCGTCTGCACTATCACCATCTTCTTCTTCGTCTTCGTCGTCATCTTCTTCCAAGTCGATGGCTGATGCACCCAAAACAGAGGAAGGGACAACAAGAAACAAAGAGAAGAACATTAAGAGGATAAAGAAGGGTTTGGAAAGGACAAGATCAGGCAGTATAAGAATAAGGCCTATGATTAATGTGCCAATCTGCACACAGCTGAAGAGCAGTGTTTTGCCACCCTTATTCCCACTTAAGAAAGGAAGATTTGATAGATAA

mRNA sequence

ATGGTTTCAATAGGCAGTGGTTGTAGTGTTCATGGATCAGCCTCATCAGAACCAAATTCCAGTCCTCGGATATCTTTCTCTTCTGAGTTTCTTGATGAAAACGACTTCATTTCCATCACTCCAAATTCACATCTAGAGAGAGAACAAGAGATTTCTGAGAGACAGAAGAAGGACAGATCAGAGAAGCTAGCATGGAGTGCTGATTTTGAGTTTCTTTCTAATAAAGTTAGTAGTCACTCCATGATTACAGCTGATGAGCTCTTCTATGAAGGGAAGCTTCTTCCCTTTTGGCACATGCAGCAAGCAGAGAGGCTTAACAAAATCAGTCTGAAATCTTCTAAAGATGTAGATAAACAAGGCTTGGTGGACATAGAGGTAAACAAGAAGGCAGAGAACAAAGTGAATTGGTTACTCGACGACGACCCGTCGCCGAGACCGCCAAAATGCACTGTTCTGTGGAAAGAATTGTTGAGGTTGAAGAAACAACGTGCGTCGTCTGCACTATCACCATCTTCTTCTTCGTCTTCGTCGTCATCTTCTTCCAAGTCGATGGCTGATGCACCCAAAACAGAGGAAGGGACAACAAGAAACAAAGAGAAGAACATTAAGAGGATAAAGAAGGGTTTGGAAAGGACAAGATCAGGCAGTATAAGAATAAGGCCTATGATTAATGTGCCAATCTGCACACAGCTGAAGAGCAGTGTTTTGCCACCCTTATTCCCACTTAAGAAAGGAAGATTTGATAGATAA

Coding sequence (CDS)

ATGGTTTCAATAGGCAGTGGTTGTAGTGTTCATGGATCAGCCTCATCAGAACCAAATTCCAGTCCTCGGATATCTTTCTCTTCTGAGTTTCTTGATGAAAACGACTTCATTTCCATCACTCCAAATTCACATCTAGAGAGAGAACAAGAGATTTCTGAGAGACAGAAGAAGGACAGATCAGAGAAGCTAGCATGGAGTGCTGATTTTGAGTTTCTTTCTAATAAAGTTAGTAGTCACTCCATGATTACAGCTGATGAGCTCTTCTATGAAGGGAAGCTTCTTCCCTTTTGGCACATGCAGCAAGCAGAGAGGCTTAACAAAATCAGTCTGAAATCTTCTAAAGATGTAGATAAACAAGGCTTGGTGGACATAGAGGTAAACAAGAAGGCAGAGAACAAAGTGAATTGGTTACTCGACGACGACCCGTCGCCGAGACCGCCAAAATGCACTGTTCTGTGGAAAGAATTGTTGAGGTTGAAGAAACAACGTGCGTCGTCTGCACTATCACCATCTTCTTCTTCGTCTTCGTCGTCATCTTCTTCCAAGTCGATGGCTGATGCACCCAAAACAGAGGAAGGGACAACAAGAAACAAAGAGAAGAACATTAAGAGGATAAAGAAGGGTTTGGAAAGGACAAGATCAGGCAGTATAAGAATAAGGCCTATGATTAATGTGCCAATCTGCACACAGCTGAAGAGCAGTGTTTTGCCACCCTTATTCCCACTTAAGAAAGGAAGATTTGATAGATAA

Protein sequence

MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQGLVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSSSKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPPLFPLKKGRFDR

Homology

[Close]

BLAST of CmaCh17G002530 vs. ExPASy TrEMBL
Match: A0A6J1L4Y8 (uncharacterized protein LOC111499176 OS=Cucurbita maxima OX=3661 GN=LOC111499176 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 6.5e-129
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS 60
           MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS
Sbjct: 1   MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS 60

Query: 61  EKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQG 120
           EKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQG
Sbjct: 61  EKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQG 120

Query: 121 LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSS 180
           LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSS
Sbjct: 121 LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSS 180

Query: 181 SKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPPLF 240
           SKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPPLF
Sbjct: 181 SKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPPLF 240

Query: 241 PLKKGRFDR 250
           PLKKGRFDR
Sbjct: 241 PLKKGRFDR 249

[Close]

BLAST of CmaCh17G002530 vs. ExPASy TrEMBL
Match: A0A6J1H4I1 (uncharacterized protein LOC111459965 OS=Cucurbita moschata OX=3662 GN=LOC111459965 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 3.7e-124
Identity = 243/249 (97.59%), Postives = 246/249 (98.80%), Query Frame = 0


Query: 1   MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS 60
           MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQK+DRS
Sbjct: 1   MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKEDRS 60

Query: 61  EKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQG 120
           EKLAWSADFEFLSNKVSSHSMITADELF++GKLLPFW MQQAERLNKISLKSSKDVDKQG
Sbjct: 61  EKLAWSADFEFLSNKVSSHSMITADELFFDGKLLPFWQMQQAERLNKISLKSSKDVDKQG 120

Query: 121 LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSS 180
           LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSP SSSSSSSSS
Sbjct: 121 LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSP-SSSSSSSSS 180

Query: 181 SKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPPLF 240
           SKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRI PMINVPICTQLKSSVLPPLF
Sbjct: 181 SKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIGPMINVPICTQLKSSVLPPLF 240

Query: 241 PLKKGRFDR 250
           PLKKGRFDR
Sbjct: 241 PLKKGRFDR 248

[Close]

BLAST of CmaCh17G002530 vs. ExPASy TrEMBL
Match: A0A5D3DC08 (SEY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00530 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 8.5e-105
Identity = 215/258 (83.33%), Postives = 231/258 (89.53%), Query Frame = 0


Query: 2   VSIGSGCSVHGS-------ASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISER 61
           + IG G SV  S        ++EPNSSPRISFSSEFLDE++FISITPNS +ER+QEI ER
Sbjct: 4   IGIGGGSSVQASPPPSSPPPATEPNSSPRISFSSEFLDESNFISITPNSQIERDQEICER 63

Query: 62  QKKDRSEKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSK 121
           QKKDRSEKLAWSADFEFLSNKVSSHSMITADELF+EGKLLPFW MQQAERLNKISLKS K
Sbjct: 64  QKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLKSPK 123

Query: 122 DVDKQGLVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSS 181
           DVD++ LV+IEVNK+AENKVNW LDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSS
Sbjct: 124 DVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSS 183

Query: 182 SSSSSSSKSMADAPKTE---EGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQL 241
           SSSSSSS+SMADA  TE   EGTT NKEKN++RIKK LERTRS SIRIRPMINVPICTQ+
Sbjct: 184 SSSSSSSRSMADAATTEEGKEGTTGNKEKNVRRIKK-LERTRSASIRIRPMINVPICTQV 243

Query: 242 KSSVLPPLFPLKKGRFDR 250
           KSSVLPPLFPLKKGRFDR
Sbjct: 244 KSSVLPPLFPLKKGRFDR 260

[Close]

BLAST of CmaCh17G002530 vs. ExPASy TrEMBL
Match: A0A6J1KCD5 (uncharacterized protein LOC111494331 OS=Cucurbita maxima OX=3661 GN=LOC111494331 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 8.5e-105
Identity = 211/249 (84.74%), Postives = 230/249 (92.37%), Query Frame = 0


Query: 1   MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS 60
           MVSI S  +   S+S EPNSSPRISFSSEFLDE++FISITP+S +ER+QEI ERQKK+RS
Sbjct: 1   MVSIDSVQTSPPSSSIEPNSSPRISFSSEFLDESNFISITPHSQIERDQEICERQKKERS 60

Query: 61  EKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQG 120
           E+LA SADFEFLSN+VSSHSM+TADELF+EGKLLPFW MQQAERLNKISLKS KDVD++ 
Sbjct: 61  ERLARSADFEFLSNQVSSHSMLTADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEED 120

Query: 121 LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSS 180
           LV+IEVNK+AENKVNW LDDDPSPRPPKCTVLWKELLRLKKQR SSALSPSSSSSSSSSS
Sbjct: 121 LVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRTSSALSPSSSSSSSSSS 180

Query: 181 SKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPPLF 240
           S+SMADA  +EEGTT NKEKNIKRIKKGLERTRS SIRIRPMINVPICTQ+KSSVLPPLF
Sbjct: 181 SRSMADAATSEEGTTGNKEKNIKRIKKGLERTRSASIRIRPMINVPICTQVKSSVLPPLF 240

Query: 241 PLKKGRFDR 250
           PLKKGRFDR
Sbjct: 241 PLKKGRFDR 249

[Close]

BLAST of CmaCh17G002530 vs. ExPASy TrEMBL
Match: A0A6J1EQC3 (uncharacterized protein LOC111436849 OS=Cucurbita moschata OX=3662 GN=LOC111436849 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 8.5e-105
Identity = 211/249 (84.74%), Postives = 230/249 (92.37%), Query Frame = 0


Query: 1   MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS 60
           MVSI S  +   S+S EPNSSPRISFSSEFLDE++FISITP+S +ER+QEI ERQKK+RS
Sbjct: 1   MVSIDSVQTSPPSSSIEPNSSPRISFSSEFLDESNFISITPHSQIERDQEICERQKKERS 60

Query: 61  EKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQG 120
           E+LA SADFEFLSN+VSSHSM+TADELF+EGKLLPFW MQQAERLNKISLKS KDVD++ 
Sbjct: 61  ERLARSADFEFLSNQVSSHSMLTADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEED 120

Query: 121 LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSS 180
           LV+IEVNK+AENKVNW LDDDPSPRPPKCTVLWKELLRLKKQR SSALSPSSSSSSSSSS
Sbjct: 121 LVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRTSSALSPSSSSSSSSSS 180

Query: 181 SKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPPLF 240
           S+SMADA  +EEGTT NKEKNIKRIKKGLERTRS SIRIRPMINVPICTQ+KSSVLPPLF
Sbjct: 181 SRSMADAATSEEGTTGNKEKNIKRIKKGLERTRSASIRIRPMINVPICTQVKSSVLPPLF 240

Query: 241 PLKKGRFDR 250
           PLKKGRFDR
Sbjct: 241 PLKKGRFDR 249

[Close]

BLAST of CmaCh17G002530 vs. NCBI nr
Match: XP_023006453.1 (uncharacterized protein LOC111499176 [Cucurbita maxima])

HSP 1 Score: 469.9 bits (1208), Expect = 1.3e-128
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS 60
           MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS
Sbjct: 1   MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS 60

Query: 61  EKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQG 120
           EKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQG
Sbjct: 61  EKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQG 120

Query: 121 LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSS 180
           LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSS
Sbjct: 121 LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSS 180

Query: 181 SKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPPLF 240
           SKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPPLF
Sbjct: 181 SKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPPLF 240

Query: 241 PLKKGRFDR 250
           PLKKGRFDR
Sbjct: 241 PLKKGRFDR 249

[Close]

BLAST of CmaCh17G002530 vs. NCBI nr
Match: KAG6574997.1 (hypothetical protein SDJN03_25636, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 458.0 bits (1177), Expect = 5.2e-125
Identity = 245/251 (97.61%), Postives = 248/251 (98.80%), Query Frame = 0


Query: 1   MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS 60
           MVSIG+GCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS
Sbjct: 1   MVSIGNGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS 60

Query: 61  EKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQG 120
           EKLAWSADFEFLSNKVSSHSMITADELF++GKLLPFW MQQAERLNKISLKSSKDVDKQG
Sbjct: 61  EKLAWSADFEFLSNKVSSHSMITADELFFDGKLLPFWQMQQAERLNKISLKSSKDVDKQG 120

Query: 121 LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSP--SSSSSSSS 180
           LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSP  SSSSSSSS
Sbjct: 121 LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSS 180

Query: 181 SSSKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPP 240
           SSSKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPP
Sbjct: 181 SSSKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPP 240

Query: 241 LFPLKKGRFDR 250
           LFPLKKGRFDR
Sbjct: 241 LFPLKKGRFDR 251

[Close]

BLAST of CmaCh17G002530 vs. NCBI nr
Match: XP_023547494.1 (uncharacterized protein LOC111806416 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 455.7 bits (1171), Expect = 2.6e-124
Identity = 247/252 (98.02%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 1   MVSIGSGCS-VHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDR 60
           MVSIGSGCS VHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDR
Sbjct: 1   MVSIGSGCSVVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDR 60

Query: 61  SEKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQ 120
           SEKLAWSADFEFLSNKVSSHSMITADELF+EGKLLPFW MQQAERLNKISLKSSKDVDKQ
Sbjct: 61  SEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLKSSKDVDKQ 120

Query: 121 GLVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSP--SSSSSSS 180
           GLVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSP  SSSSSSS
Sbjct: 121 GLVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSS 180

Query: 181 SSSSKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLP 240
           SSSSKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLP
Sbjct: 181 SSSSKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLP 240

Query: 241 PLFPLKKGRFDR 250
           PLFPLKKGRFDR
Sbjct: 241 PLFPLKKGRFDR 252

[Close]

BLAST of CmaCh17G002530 vs. NCBI nr
Match: XP_022958805.1 (uncharacterized protein LOC111459965 [Cucurbita moschata])

HSP 1 Score: 454.1 bits (1167), Expect = 7.6e-124
Identity = 243/249 (97.59%), Postives = 246/249 (98.80%), Query Frame = 0


Query: 1   MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS 60
           MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQK+DRS
Sbjct: 1   MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKEDRS 60

Query: 61  EKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQG 120
           EKLAWSADFEFLSNKVSSHSMITADELF++GKLLPFW MQQAERLNKISLKSSKDVDKQG
Sbjct: 61  EKLAWSADFEFLSNKVSSHSMITADELFFDGKLLPFWQMQQAERLNKISLKSSKDVDKQG 120

Query: 121 LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSS 180
           LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSP SSSSSSSSS
Sbjct: 121 LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSP-SSSSSSSSS 180

Query: 181 SKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPPLF 240
           SKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRI PMINVPICTQLKSSVLPPLF
Sbjct: 181 SKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIGPMINVPICTQLKSSVLPPLF 240

Query: 241 PLKKGRFDR 250
           PLKKGRFDR
Sbjct: 241 PLKKGRFDR 248

[Close]

BLAST of CmaCh17G002530 vs. NCBI nr
Match: KAG7013568.1 (hypothetical protein SDJN02_23735, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 450.7 bits (1158), Expect = 8.4e-123
Identity = 242/251 (96.41%), Postives = 245/251 (97.61%), Query Frame = 0


Query: 1   MVSIGSGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS 60
           MVSIG+GCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS
Sbjct: 1   MVSIGNGCSVHGSASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRS 60

Query: 61  EKLAWSADFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQG 120
           EKLAWSADFEFLSNKVSSHSMITADELF++GKLLPFW MQQAERLNKISLKSSKDVDKQG
Sbjct: 61  EKLAWSADFEFLSNKVSSHSMITADELFFDGKLLPFWQMQQAERLNKISLKSSKDVDKQG 120

Query: 121 LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSP--SSSSSSSS 180
           LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSP  SSSSSSSS
Sbjct: 121 LVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSS 180

Query: 181 SSSKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSVLPP 240
           SSSKSMADAPKTEEGTTRNKEKNIKRIKK LERTRSGSIRIRPMINV ICTQLK SVLPP
Sbjct: 181 SSSKSMADAPKTEEGTTRNKEKNIKRIKKDLERTRSGSIRIRPMINVSICTQLKGSVLPP 240

Query: 241 LFPLKKGRFDR 250
           LFPLKKGRFDR
Sbjct: 241 LFPLKKGRFDR 251

[Close]

BLAST of CmaCh17G002530 vs. TAIR 10
Match: AT3G05980.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits to 202 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). )

HSP 1 Score: 191.4 bits (485), Expect = 8.5e-49
Identity = 133/249 (53.41%), Postives = 163/249 (65.46%), Query Frame = 0


Query: 18  PNSSPRISFSSEFLDENDFISITPNSHLEREQEISERQKKDRSEKLAWSADFEFLSNK-V 77
           P   PRISFSS+  D  DFI ITP              K+D  +     +DFEFLS++ V
Sbjct: 13  PLLGPRISFSSDLSDGGDFICITP-----------VMCKEDVVKGSVKVSDFEFLSSENV 72

Query: 78  SSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQGLVDIEVNKK------A 137
           S   M+TADELF EGKLLPFW ++ +E+L  I+LK++++ + +    +EV KK       
Sbjct: 73  SPQRMLTADELFSEGKLLPFWQVKHSEKLKNITLKTNEEEEAEKR-KVEVKKKDQEINNR 132

Query: 138 ENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASSALSP-------SSSSSSSSSSSKS 197
           +N+V W +D+DPSPRPPKCTVLWKELLRLKKQR  S+ SP       S S SSS+SSS S
Sbjct: 133 DNRVTWFIDEDPSPRPPKCTVLWKELLRLKKQRNPSS-SPVTARTVSSLSPSSSTSSSSS 192

Query: 198 MADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIRPMINVPICTQLKSSV-LPPLFP- 250
           + DA K EE     KEK  KR KKGLERTRS S+RIRPMI+VPICT  KSS+ LPPLFP 
Sbjct: 193 LEDAAKREE-----KEKEGKRGKKGLERTRSASMRIRPMIHVPICTPSKSSLPLPPLFPL 243

[Close]

BLAST of CmaCh17G002530 vs. TAIR 10
Match: AT5G19340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05980.1); Has 1000 Blast hits to 906 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 36; Plants - 128; Viruses - 4; Other Eukaryotes - 766 (source: NCBI BLink). )

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-47
Identity = 137/272 (50.37%), Postives = 172/272 (63.24%), Query Frame = 0


Query: 14  ASSEPNSS-PRISFSSEFL---DENDFISITPNSHLEREQEISERQKKDRSEKLAWSADF 73
           A +EP+++ PRISFS++      + DFI I P  +L     I  R++KD+S   A   DF
Sbjct: 10  AEAEPSTTGPRISFSADLSSSDSDGDFICINPVMNL-----IVGREEKDKSSVKA--GDF 69

Query: 74  EFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLK----------SSKDVDKQ 133
           EFLS      +M++ADELF EGKLLPFW ++ +E+L  ++LK            K V+++
Sbjct: 70  EFLSENA---TMLSADELFSEGKLLPFWQVKHSEKLKNVTLKPKVEVQQEEEDHKVVNEE 129

Query: 134 GLVDIEVNKKAENKVN----------WLLDDDPSPRPPKCTVLWKELLRLKKQRAS---- 193
           G V    NK+ EN  N          W LDDDPSPRPPKCTVLWKELLRLKKQR +    
Sbjct: 130 GFVH---NKEQENNNNNNNNNNNRGSWFLDDDPSPRPPKCTVLWKELLRLKKQRTTTTTT 189

Query: 194 -----SALSPSSSSSSSSSSSKSMADAPKTEEGTTRNKEKNIKRIKKGLERTRSGSIRIR 250
                S+LSPSSSSSS+SSSS S+ DA K EE     +EK  KR KKGLERTRS ++RIR
Sbjct: 190 ASTRVSSLSPSSSSSSTSSSSSSIGDAVKKEE-----REKEGKRGKKGLERTRSVTMRIR 249

[Close]

BLAST of CmaCh17G002530 vs. TAIR 10
Match: AT3G12970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56020.1); Has 2408 Blast hits to 418 proteins in 91 species: Archae - 0; Bacteria - 41; Metazoa - 198; Fungi - 63; Plants - 125; Viruses - 13; Other Eukaryotes - 1968 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05
Identity = 42/124 (33.87%), Postives = 68/124 (54.84%), Query Frame = 0


Query: 68  DFEFLSNKVSSHSMITADELFYEGKLLPFWHMQQAERLNKISLKSSKDVDKQGLVDIEVN 127
           DFEFL       +M++ADELF +GKL+P        + + ++    K +       ++  
Sbjct: 43  DFEFLLE--DPVTMLSADELFSDGKLVPL-------KFSGVTYPEEKPITSVVHTAVKPC 102

Query: 128 KKAENKVNWLLDDDP-SPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSSSKSMAD 187
           ++ E +++ ++D    SPR P+CTV W+ELL LK+   +   + +SSSS  SSSS +   
Sbjct: 103 RRLEMEISGVVDPYLFSPRAPRCTVRWRELLGLKRLAKTQQEASASSSSRLSSSSPN--- 153

Query: 188 APKT 191
            PKT
Sbjct: 163 -PKT 153

The following BLAST results are available for this feature:

BLAST of CmaCh17G002530 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh17G002530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L4Y8	6.5e-129	100.00	uncharacterized protein LOC111499176 OS=Cucurbita maxima OX=3661 GN=LOC111499176...	[more]
A0A6J1H4I1	3.7e-124	97.59	uncharacterized protein LOC111459965 OS=Cucurbita moschata OX=3662 GN=LOC1114599...	[more]
A0A5D3DC08	8.5e-105	83.33	SEY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00530 PE=4 SV...	[more]
A0A6J1KCD5	8.5e-105	84.74	uncharacterized protein LOC111494331 OS=Cucurbita maxima OX=3661 GN=LOC111494331...	[more]
A0A6J1EQC3	8.5e-105	84.74	uncharacterized protein LOC111436849 OS=Cucurbita moschata OX=3662 GN=LOC1114368...	[more]

BLAST of CmaCh17G002530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006453.1	1.3e-128	100.00	uncharacterized protein LOC111499176 [Cucurbita maxima]	[more]
KAG6574997.1	5.2e-125	97.61	hypothetical protein SDJN03_25636, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023547494.1	2.6e-124	98.02	uncharacterized protein LOC111806416 [Cucurbita pepo subsp. pepo]	[more]
XP_022958805.1	7.6e-124	97.59	uncharacterized protein LOC111459965 [Cucurbita moschata]	[more]
KAG7013568.1	8.4e-123	96.41	hypothetical protein SDJN02_23735, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmaCh17G002530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05980.1	8.5e-49	53.41	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G19340.1	1.2e-47	50.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G12970.1	1.2e-05	33.87	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..213
None	No IPR available	PANTHER	PTHR31722	OS06G0675200 PROTEIN	coord: 13..249
None	No IPR available	PANTHER	PTHR31722:SF2	HISTONE-LYSINE N-METHYLTRANSFERASE SETD1A-LIKE	coord: 13..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G002530.1	CmaCh17G002530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity