CmaCh17G001690 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G001690
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-H2 finger protein ATL16-like
Location	Cma_Chr17: 877257 .. 878147 (+)
RNA-Seq Expression	CmaCh17G001690
Synteny	CmaCh17G001690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAACCCCTCATCTCTCCGTCGGCCACTCCGCTTCACTCCTCCACCTCCGTTTCAAGTTTTCCAATCATCGCCGTTGCCGTCATCGGAATCTGCGCCACTGCGTTCTTACTCGTCGGCTATTACATCTTCGTCATCAAATGCTGCCTCAACTGGCAACGAATTGAAATCCTCCGCCGGTTTTCCCTTTCCCGCCGCCGTGAAGAGACATTAATACTCCGGCAGCCAGCGGATCCACGTGGGTTAGACCCATCAACGATTCAATCAATCCCATTGATTAATTACAAGAAACCCATTAAGGAAACAGCCAGTGGTGGCGAATGCGCCGTTTGCCTGACGGAGTTTCGGCCGGAGGAGCAATTGAGAAAGATTCCGATTTGTAGCCATCTCTTTCATATTGATTGCATTGACATTTGGCTTCAGAATAATCCCAATTGCCCACTTTGTAGAACCTCAATCTCCGCCCAAAATTGGCTGATTCCGGTCGATCAAGCCCCTTCCCCTCGAGATTTGGCTCTCAATTCCGGCAGCTCCGTCGATGCCACCACCGCCGATGAGAATTTCGTTGTGATTGAACTTGGTCGGAATCCCGACCGCCGCCGTCCTCCACCGTTTGGAAAGGTTACGAGTATGGGGGATGAGTGTATTGACATGAGGGAGAAGGATAAGGAGTTTTTAGTGCAGCCCATTAGGAGGTCGTTTTCGATGGATTCTTCCGGCGACCGGCAGCTGTACATGGCGGTGCAGGCGGCGGTGCGGCAGAGCGGCGGCGGTGAGAGTAGGGTTGAGGCAGAGGGTTGCAGTAACAGAGTACGAAGATCTTTCTTTTCTTTTGGAAGTGGCAGAGGATCTAGAAATGGAGTTTTGCCCATTCAGCTTCAACCTTAA

mRNA sequence

ATGGAAAAACCCCTCATCTCTCCGTCGGCCACTCCGCTTCACTCCTCCACCTCCGTTTCAAGTTTTCCAATCATCGCCGTTGCCGTCATCGGAATCTGCGCCACTGCGTTCTTACTCGTCGGCTATTACATCTTCGTCATCAAATGCTGCCTCAACTGGCAACGAATTGAAATCCTCCGCCGGTTTTCCCTTTCCCGCCGCCGTGAAGAGACATTAATACTCCGGCAGCCAGCGGATCCACGTGGGTTAGACCCATCAACGATTCAATCAATCCCATTGATTAATTACAAGAAACCCATTAAGGAAACAGCCAGTGGTGGCGAATGCGCCGTTTGCCTGACGGAGTTTCGGCCGGAGGAGCAATTGAGAAAGATTCCGATTTGTAGCCATCTCTTTCATATTGATTGCATTGACATTTGGCTTCAGAATAATCCCAATTGCCCACTTTGTAGAACCTCAATCTCCGCCCAAAATTGGCTGATTCCGGTCGATCAAGCCCCTTCCCCTCGAGATTTGGCTCTCAATTCCGGCAGCTCCGTCGATGCCACCACCGCCGATGAGAATTTCGTTGTGATTGAACTTGGTCGGAATCCCGACCGCCGCCGTCCTCCACCGTTTGGAAAGGTTACGAGTATGGGGGATGAGTGTATTGACATGAGGGAGAAGGATAAGGAGTTTTTAGTGCAGCCCATTAGGAGGTCGTTTTCGATGGATTCTTCCGGCGACCGGCAGCTGTACATGGCGGTGCAGGCGGCGGTGCGGCAGAGCGGCGGCGGTGAGAGTAGGGTTGAGGCAGAGGGTTGCAGTAACAGAGTACGAAGATCTTTCTTTTCTTTTGGAAGTGGCAGAGGATCTAGAAATGGAGTTTTGCCCATTCAGCTTCAACCTTAA

Coding sequence (CDS)

ATGGAAAAACCCCTCATCTCTCCGTCGGCCACTCCGCTTCACTCCTCCACCTCCGTTTCAAGTTTTCCAATCATCGCCGTTGCCGTCATCGGAATCTGCGCCACTGCGTTCTTACTCGTCGGCTATTACATCTTCGTCATCAAATGCTGCCTCAACTGGCAACGAATTGAAATCCTCCGCCGGTTTTCCCTTTCCCGCCGCCGTGAAGAGACATTAATACTCCGGCAGCCAGCGGATCCACGTGGGTTAGACCCATCAACGATTCAATCAATCCCATTGATTAATTACAAGAAACCCATTAAGGAAACAGCCAGTGGTGGCGAATGCGCCGTTTGCCTGACGGAGTTTCGGCCGGAGGAGCAATTGAGAAAGATTCCGATTTGTAGCCATCTCTTTCATATTGATTGCATTGACATTTGGCTTCAGAATAATCCCAATTGCCCACTTTGTAGAACCTCAATCTCCGCCCAAAATTGGCTGATTCCGGTCGATCAAGCCCCTTCCCCTCGAGATTTGGCTCTCAATTCCGGCAGCTCCGTCGATGCCACCACCGCCGATGAGAATTTCGTTGTGATTGAACTTGGTCGGAATCCCGACCGCCGCCGTCCTCCACCGTTTGGAAAGGTTACGAGTATGGGGGATGAGTGTATTGACATGAGGGAGAAGGATAAGGAGTTTTTAGTGCAGCCCATTAGGAGGTCGTTTTCGATGGATTCTTCCGGCGACCGGCAGCTGTACATGGCGGTGCAGGCGGCGGTGCGGCAGAGCGGCGGCGGTGAGAGTAGGGTTGAGGCAGAGGGTTGCAGTAACAGAGTACGAAGATCTTTCTTTTCTTTTGGAAGTGGCAGAGGATCTAGAAATGGAGTTTTGCCCATTCAGCTTCAACCTTAA

Protein sequence

MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEEQLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSVDATTADENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP

Homology

[Close]

BLAST of CmaCh17G001690 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.4e-65
Identity = 158/354 (44.63%), Postives = 203/354 (57.34%), Query Frame = 0


Query: 15  SSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSRRR---EET 74
           +S++ +SFPI+AVAVIGI ATAFLLV YY+FVIKCCLNW RI+IL RFSLSRRR   ++ 
Sbjct: 27  ASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDP 86

Query: 75  LILRQP-ADPRGLDPSTIQSIPLINYKKPI-------------KETASGGECAVCLTEFR 134
           L++  P    RGLD S I++IP+  +KK               +E     EC+VCL+EF+
Sbjct: 87  LMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQ 146

Query: 135 PEEQLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSG 194
            EE+LR IP CSHLFHIDCID+WLQNN NCPLCRT +S      P D+  +P      S 
Sbjct: 147 DEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDT-SFPPDRVSAPS----TSP 206

Query: 195 SSVDATTADENFVVIELGRNPDRRRPPP-------------------------------- 254
            ++     +  +VVIELG +    R  P                                
Sbjct: 207 ENLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKK 266

Query: 255 ------------FGKVTSMGDECIDMRE-KDKEF-LVQPIRRSFSMDSSGDRQLYMAVQA 297
                         K+TSMGDECID+R  KD++F  +QPIRRS SMDSS DRQLY+AVQ 
Sbjct: 267 LDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQE 326

[Close]

BLAST of CmaCh17G001690 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-60
Identity = 154/351 (43.87%), Postives = 201/351 (57.26%), Query Frame = 0


Query: 15  SSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSRRREETLIL 74
           +S+S ++FPI+A+AVIGI ATAFLLV YYIFVIKCCLNW +I+I RR   S  +   +I 
Sbjct: 34  TSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIY 93

Query: 75  RQPADPRGLDPSTIQSIPLINYKK------PIKETASGGECAVCLTEFRPEEQLRKIPIC 134
                 RGLD S I++IP+  +KK         ++ +  EC+VCL EF+ +E+LR IP C
Sbjct: 94  SPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNC 153

Query: 135 SHLFHIDCIDIWLQNNPNCPLCRTSISAQ-NWLIPVDQAP-SPRDLALNSGSSVDATT-- 194
            H+FHIDCIDIWLQ N NCPLCRTS+S + ++ + +  AP SPR+   NS  S +     
Sbjct: 154 CHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRE---NSPHSRNRNLEP 213

Query: 195 -----ADENFVVIEL------------------------------GRNPDRRRPPP---- 254
                 D++FVVIEL                              G +P    P P    
Sbjct: 214 GLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSPLPIKFG 273

Query: 255 ----------FGKVTSMGDECIDMREKDKEF-LVQPIRRSFSMDSSGDRQLYMAVQAAVR 297
                     F KVTSMGDECID R KD  F  +QPIRRS SMDSS DRQLY+AVQ  + 
Sbjct: 274 NRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAVQEEIS 333

[Close]

BLAST of CmaCh17G001690 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-20
Identity = 84/279 (30.11%), Postives = 128/279 (45.88%), Query Frame = 0


Query: 15  SSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSRRREE--TL 74
           SS+S SSF  + +A+IGI  +A +LV YY  + K C    +       +L+   E   + 
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 75  ILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEEQLRKIPICSHLF 134
             R   +  GL+ S I+SI +  YK        G +C+VCL+EF   E LR +P C+H F
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKSG-DGFVDGSDCSVCLSEFEENESLRLLPKCNHAF 166

Query: 135 HIDCIDIWLQNNPNCPLCR----------------TSISAQNWLIPVDQAPSPRDLALNS 194
           H+ CID WL+++ NCPLCR                 S+   N      Q  S  ++ LN 
Sbjct: 167 HLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNL 226

Query: 195 GSSVDATTADENFVVI---ELG-RNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIR 254
                 T   ++ VVI   E+G RN D R          + +E  + +++D      PIR
Sbjct: 227 AGYESQTGDFDSVVVIEDLEIGSRNSDAR------SELQLPEERRETKDEDS----LPIR 286

Query: 255 RSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNR 272
           RS S++S     + +++   +R+    E      G S R
Sbjct: 287 RSVSLNSG----VVVSIADVLREIEDEEGESGGVGTSQR 310

[Close]

BLAST of CmaCh17G001690 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 3.7e-19
Identity = 77/256 (30.08%), Postives = 118/256 (46.09%), Query Frame = 0


Query: 25  IAVAVIGICATAFLLVGYYIFVIKCCLN---------WQRIEILRRFSLSRRREETLILR 84
           + +A+ GI ATAFLL  YY  V K C N           R +I+   +   R ++     
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 85  QPADPRGLDPSTIQSIPLINYKKPIKE-TASGGECAVCLTEFRPEEQLRKIPICSHLFHI 144
             +   GLD + I+ I     KK       +G +C++CL EF  +E LR +P C+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 145 DCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSVDATTADENFVVI-- 204
            CID WL+++ NCPLCR  I     ++P  Q P    + +N         + E  VV+  
Sbjct: 181 VCIDRWLKSHSNCPLCRAKI-----IVPTTQQPEHHVVVMNLDRFTSNVGSAEGNVVVDD 240

Query: 205 ---ELGRNPDRRRPPPFG------KVTSMGDE---CIDMREKDKEFLVQPIRRSFSMDSS 257
              E+  +     P  F       +++  G+E     D+   ++E LV  ++RSFS  S 
Sbjct: 241 HREEVSVSISSHHPSWFSAADIVLRISRDGEEEEGNYDLENGNREKLVD-LKRSFS--SG 300

[Close]

BLAST of CmaCh17G001690 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 8.2e-19
Identity = 84/281 (29.89%), Postives = 122/281 (43.42%), Query Frame = 0


Query: 17  TSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSRRREETLILRQ 76
           +S S F  + +A+IGI A+AF+LV YY  + K C         RR   S       I R 
Sbjct: 51  SSSSDFSPLLIALIGILASAFILVSYYTLISKYC--------HRRRHNSSSTSAAAINRI 110

Query: 77  PAD-------------------------PRGLDPSTIQSIPLINYKKPIKETASGGECAV 136
            +D                           GLD S I+SI +  Y+K +       +C+V
Sbjct: 111 SSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRK-MDGFVESSDCSV 170

Query: 137 CLTEFRPEEQLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRD 196
           CL+EF+  E LR +P C+H FH+ CID WL+++ NCPLCR  I   + +  VD       
Sbjct: 171 CLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIV 230

Query: 197 LALNSGSSVDATTADENFVVIELGRNPDRRRPPPFGK-VTSMGDECIDMREKDKEFLVQP 256
              NS      +T D++ VV+ L     R R     +  T    E  D R+ ++      
Sbjct: 231 TENNS-----ISTGDDSVVVVNLDLENSRSRNETVNEGSTPKPPEMQDSRDGEE------ 290

Query: 257 IRRSFSMDSSGD----RQLYMAVQAAVRQSGGGESRVEAEG 268
            RRS S++S G       +   ++     +G G SR   EG
Sbjct: 291 -RRSASLNSGGGVVSIADILREIEDDEESAGVGTSRWVEEG 310

[Close]

BLAST of CmaCh17G001690 vs. ExPASy TrEMBL
Match: A0A6J1L4L0 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499094 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 2.7e-166
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60
           MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120
           RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE
Sbjct: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180
           QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180

Query: 181 DATTADENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS 240
           DATTADENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS
Sbjct: 181 DATTADENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS 240

Query: 241 GDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP 297
           GDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP
Sbjct: 241 GDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP 296

[Close]

BLAST of CmaCh17G001690 vs. ExPASy TrEMBL
Match: A0A6J1H640 (RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111459948 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 5.8e-161
Identity = 285/296 (96.28%), Postives = 292/296 (98.65%), Query Frame = 0


Query: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60
           MEKPLISPSATP HSST+VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPPHSSTAVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120
           RFSLSRRREETLILRQP +PRGLDPSTIQSIPLINYKKPIKET+SGGECAVCLTEF+PEE
Sbjct: 61  RFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETSSGGECAVCLTEFQPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180
           QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIP+DQAPSPRDL LNSGSSV
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPIDQAPSPRDLPLNSGSSV 180

Query: 181 DATTADENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS 240
            ATT+DENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS
Sbjct: 181 AATTSDENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS 240

Query: 241 GDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP 297
           GDRQLYMAVQAAV+QSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP
Sbjct: 241 GDRQLYMAVQAAVQQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP 296

[Close]

BLAST of CmaCh17G001690 vs. ExPASy TrEMBL
Match: A0A5A7VEZ8 (RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00490 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 9.4e-135
Identity = 250/308 (81.17%), Postives = 266/308 (86.36%), Query Frame = 0


Query: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60
           M +PLISPS +PLHSS  VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120
           RFSLSRRRE+TLILRQ A+PRGLDPS IQSIPLINYKKPI ET +GGECAVCLTEF+ EE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180
           QLRKIPICSHLFHIDCIDIWLQNN NCPLCRTSIS QNWLIP DQAPS RDLALN+G  +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 DATTADENFVVIELGRNPDRRRPP------------PFGKVTSMGDECIDMREKDKEFLV 240
            A   DENFVVIELG N DRR+PP             F KVTSMGDECI+MREKD+EF+V
Sbjct: 181 SA--GDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 297
           QPIRRSFSMDSSGDRQLYMAVQAAVR+  GGE+ VE EGCS+RV+RSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNA 300

[Close]

BLAST of CmaCh17G001690 vs. ExPASy TrEMBL
Match: A0A1S3CD01 (RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103499411 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 9.4e-135
Identity = 250/308 (81.17%), Postives = 266/308 (86.36%), Query Frame = 0


Query: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60
           M +PLISPS +PLHSS  VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120
           RFSLSRRRE+TLILRQ A+PRGLDPS IQSIPLINYKKPI ET +GGECAVCLTEF+ EE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180
           QLRKIPICSHLFHIDCIDIWLQNN NCPLCRTSIS QNWLIP DQAPS RDLALN+G  +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 DATTADENFVVIELGRNPDRRRPP------------PFGKVTSMGDECIDMREKDKEFLV 240
            A   DENFVVIELG N DRR+PP             F KVTSMGDECI+MREKD+EF+V
Sbjct: 181 SA--GDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 297
           QPIRRSFSMDSSGDRQLYMAVQAAVR+  GGE+ VE EGCS+RV+RSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNA 300

[Close]

BLAST of CmaCh17G001690 vs. ExPASy TrEMBL
Match: A0A0A0LNP5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G178720 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.0e-133
Identity = 251/309 (81.23%), Postives = 266/309 (86.08%), Query Frame = 0


Query: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60
           M +PLISPS TPLHSS  VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTTPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKE-TASGGECAVCLTEFRPE 120
           RFSLSRRRE+TLILRQ A+PRGLDPSTIQSIPLINYKKPI E T +GGECAVCLTEF+ E
Sbjct: 61  RFSLSRRREQTLILRQQAEPRGLDPSTIQSIPLINYKKPINETTTTGGECAVCLTEFQTE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSS 180
           EQLRKIPICSHLFHIDCIDIWLQNN NCPLCRTSIS QNWLIP +QAPS RDLALN  +S
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTNQAPSARDLALN--TS 180

Query: 181 VDATTADENFVVIELGRNPDRRRPP------------PFGKVTSMGDECIDMREKDKEFL 240
           +  +  DENFVVIELG N DR RPP             F KVTSMGDECI+MREKD+EF+
Sbjct: 181 IPISAGDENFVVIELGGNLDRCRPPELVSGEVAKSERKFKKVTSMGDECINMREKDEEFI 240

Query: 241 VQPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRN 297
           VQPIRRSFSMDSSGDRQLYMAVQAAVR+  GGES VE EGCS+RV+RSFFSFGSGRGSRN
Sbjct: 241 VQPIRRSFSMDSSGDRQLYMAVQAAVREKSGGESGVEVEGCSSRVKRSFFSFGSGRGSRN 300

[Close]

BLAST of CmaCh17G001690 vs. NCBI nr
Match: XP_023006323.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 594.3 bits (1531), Expect = 5.6e-166
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60
           MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120
           RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE
Sbjct: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180
           QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180

Query: 181 DATTADENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS 240
           DATTADENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS
Sbjct: 181 DATTADENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS 240

Query: 241 GDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP 297
           GDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP
Sbjct: 241 GDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP 296

[Close]

BLAST of CmaCh17G001690 vs. NCBI nr
Match: XP_022958779.1 (RING-H2 finger protein ATL16-like [Cucurbita moschata])

HSP 1 Score: 576.6 bits (1485), Expect = 1.2e-160
Identity = 285/296 (96.28%), Postives = 292/296 (98.65%), Query Frame = 0


Query: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60
           MEKPLISPSATP HSST+VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPPHSSTAVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120
           RFSLSRRREETLILRQP +PRGLDPSTIQSIPLINYKKPIKET+SGGECAVCLTEF+PEE
Sbjct: 61  RFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETSSGGECAVCLTEFQPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180
           QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIP+DQAPSPRDL LNSGSSV
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPIDQAPSPRDLPLNSGSSV 180

Query: 181 DATTADENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS 240
            ATT+DENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS
Sbjct: 181 AATTSDENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS 240

Query: 241 GDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP 297
           GDRQLYMAVQAAV+QSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP
Sbjct: 241 GDRQLYMAVQAAVQQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP 296

[Close]

BLAST of CmaCh17G001690 vs. NCBI nr
Match: KAG7013490.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 574.3 bits (1479), Expect = 6.0e-160
Identity = 284/296 (95.95%), Postives = 290/296 (97.97%), Query Frame = 0


Query: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60
           MEKP+ISPSATP HSST+VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPVISPSATPPHSSTAVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120
           RFSLSRRREETLILRQP +PRGLDPSTIQSIPLINYKKPIKET SGGECAVCLTEF+PEE
Sbjct: 61  RFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETTSGGECAVCLTEFQPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180
           QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIP+DQAPSPRDL LNSGSSV
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPIDQAPSPRDLPLNSGSSV 180

Query: 181 DATTADENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS 240
            ATT+DENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS
Sbjct: 181 AATTSDENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS 240

Query: 241 GDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP 297
           GDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGS RGSRNGVLPIQLQP
Sbjct: 241 GDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSSRGSRNGVLPIQLQP 296

[Close]

BLAST of CmaCh17G001690 vs. NCBI nr
Match: KAG6574922.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 574.3 bits (1479), Expect = 6.0e-160
Identity = 285/296 (96.28%), Postives = 290/296 (97.97%), Query Frame = 0


Query: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60
           MEKPLISPSATP HSST+VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPPHSSTAVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120
           RFSLSRRREETLILRQP +PRGLDPSTIQSIPLINYKKPIKET SGGECAVCLTEF+PEE
Sbjct: 61  RFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETTSGGECAVCLTEFQPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180
           QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIP+DQAPSPRDL LNS SSV
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPIDQAPSPRDLPLNSCSSV 180

Query: 181 DATTADENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS 240
            ATT+DENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS
Sbjct: 181 AATTSDENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS 240

Query: 241 GDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP 297
           GDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP
Sbjct: 241 GDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP 296

[Close]

BLAST of CmaCh17G001690 vs. NCBI nr
Match: XP_023548943.1 (RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 573.5 bits (1477), Expect = 1.0e-159
Identity = 287/297 (96.63%), Postives = 291/297 (97.98%), Query Frame = 0


Query: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60
           MEKPLISPSATPLHSST+VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPLHSSTAVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120
           RFSLSRRREETLILRQP +PRGLDPSTIQSIPLINYKKPIKET SGGECAVCLTEF+PEE
Sbjct: 61  RFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETTSGGECAVCLTEFQPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180
           QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQ+PSPRDL LNSGSSV
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQSPSPRDLPLNSGSSV 180

Query: 181 DATTADENFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS 240
            ATTAD NFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS
Sbjct: 181 AATTADMNFVVIELGRNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIRRSFSMDSS 240

Query: 241 GDRQLYMAVQAAVRQS-GGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP 297
           GDRQLYMAVQAAVRQS GGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP
Sbjct: 241 GDRQLYMAVQAAVRQSGGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNGVLPIQLQP 297

[Close]

BLAST of CmaCh17G001690 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 249.6 bits (636), Expect = 3.1e-66
Identity = 158/354 (44.63%), Postives = 203/354 (57.34%), Query Frame = 0


Query: 15  SSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSRRR---EET 74
           +S++ +SFPI+AVAVIGI ATAFLLV YY+FVIKCCLNW RI+IL RFSLSRRR   ++ 
Sbjct: 27  ASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDP 86

Query: 75  LILRQP-ADPRGLDPSTIQSIPLINYKKPI-------------KETASGGECAVCLTEFR 134
           L++  P    RGLD S I++IP+  +KK               +E     EC+VCL+EF+
Sbjct: 87  LMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQ 146

Query: 135 PEEQLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSG 194
            EE+LR IP CSHLFHIDCID+WLQNN NCPLCRT +S      P D+  +P      S 
Sbjct: 147 DEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDT-SFPPDRVSAPS----TSP 206

Query: 195 SSVDATTADENFVVIELGRNPDRRRPPP-------------------------------- 254
            ++     +  +VVIELG +    R  P                                
Sbjct: 207 ENLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKK 266

Query: 255 ------------FGKVTSMGDECIDMRE-KDKEF-LVQPIRRSFSMDSSGDRQLYMAVQA 297
                         K+TSMGDECID+R  KD++F  +QPIRRS SMDSS DRQLY+AVQ 
Sbjct: 267 LDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQE 326

[Close]

BLAST of CmaCh17G001690 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 235.0 bits (598), Expect = 8.0e-62
Identity = 154/351 (43.87%), Postives = 201/351 (57.26%), Query Frame = 0


Query: 15  SSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSRRREETLIL 74
           +S+S ++FPI+A+AVIGI ATAFLLV YYIFVIKCCLNW +I+I RR   S  +   +I 
Sbjct: 34  TSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIY 93

Query: 75  RQPADPRGLDPSTIQSIPLINYKK------PIKETASGGECAVCLTEFRPEEQLRKIPIC 134
                 RGLD S I++IP+  +KK         ++ +  EC+VCL EF+ +E+LR IP C
Sbjct: 94  SPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNC 153

Query: 135 SHLFHIDCIDIWLQNNPNCPLCRTSISAQ-NWLIPVDQAP-SPRDLALNSGSSVDATT-- 194
            H+FHIDCIDIWLQ N NCPLCRTS+S + ++ + +  AP SPR+   NS  S +     
Sbjct: 154 CHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRE---NSPHSRNRNLEP 213

Query: 195 -----ADENFVVIEL------------------------------GRNPDRRRPPP---- 254
                 D++FVVIEL                              G +P    P P    
Sbjct: 214 GLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSPLPIKFG 273

Query: 255 ----------FGKVTSMGDECIDMREKDKEF-LVQPIRRSFSMDSSGDRQLYMAVQAAVR 297
                     F KVTSMGDECID R KD  F  +QPIRRS SMDSS DRQLY+AVQ  + 
Sbjct: 274 NRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAVQEEIS 333

[Close]

BLAST of CmaCh17G001690 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-21
Identity = 84/279 (30.11%), Postives = 128/279 (45.88%), Query Frame = 0


Query: 15  SSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSRRREE--TL 74
           SS+S SSF  + +A+IGI  +A +LV YY  + K C    +       +L+   E   + 
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 75  ILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEEQLRKIPICSHLF 134
             R   +  GL+ S I+SI +  YK        G +C+VCL+EF   E LR +P C+H F
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKSG-DGFVDGSDCSVCLSEFEENESLRLLPKCNHAF 166

Query: 135 HIDCIDIWLQNNPNCPLCR----------------TSISAQNWLIPVDQAPSPRDLALNS 194
           H+ CID WL+++ NCPLCR                 S+   N      Q  S  ++ LN 
Sbjct: 167 HLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNL 226

Query: 195 GSSVDATTADENFVVI---ELG-RNPDRRRPPPFGKVTSMGDECIDMREKDKEFLVQPIR 254
                 T   ++ VVI   E+G RN D R          + +E  + +++D      PIR
Sbjct: 227 AGYESQTGDFDSVVVIEDLEIGSRNSDAR------SELQLPEERRETKDEDS----LPIR 286

Query: 255 RSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNR 272
           RS S++S     + +++   +R+    E      G S R
Sbjct: 287 RSVSLNSG----VVVSIADVLREIEDEEGESGGVGTSQR 310

[Close]

BLAST of CmaCh17G001690 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 2.6e-20
Identity = 77/256 (30.08%), Postives = 118/256 (46.09%), Query Frame = 0


Query: 25  IAVAVIGICATAFLLVGYYIFVIKCCLN---------WQRIEILRRFSLSRRREETLILR 84
           + +A+ GI ATAFLL  YY  V K C N           R +I+   +   R ++     
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 85  QPADPRGLDPSTIQSIPLINYKKPIKE-TASGGECAVCLTEFRPEEQLRKIPICSHLFHI 144
             +   GLD + I+ I     KK       +G +C++CL EF  +E LR +P C+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 145 DCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSVDATTADENFVVI-- 204
            CID WL+++ NCPLCR  I     ++P  Q P    + +N         + E  VV+  
Sbjct: 181 VCIDRWLKSHSNCPLCRAKI-----IVPTTQQPEHHVVVMNLDRFTSNVGSAEGNVVVDD 240

Query: 205 ---ELGRNPDRRRPPPFG------KVTSMGDE---CIDMREKDKEFLVQPIRRSFSMDSS 257
              E+  +     P  F       +++  G+E     D+   ++E LV  ++RSFS  S 
Sbjct: 241 HREEVSVSISSHHPSWFSAADIVLRISRDGEEEEGNYDLENGNREKLVD-LKRSFS--SG 300

[Close]

BLAST of CmaCh17G001690 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 5.8e-20
Identity = 84/281 (29.89%), Postives = 122/281 (43.42%), Query Frame = 0


Query: 17  TSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILRRFSLSRRREETLILRQ 76
           +S S F  + +A+IGI A+AF+LV YY  + K C         RR   S       I R 
Sbjct: 51  SSSSDFSPLLIALIGILASAFILVSYYTLISKYC--------HRRRHNSSSTSAAAINRI 110

Query: 77  PAD-------------------------PRGLDPSTIQSIPLINYKKPIKETASGGECAV 136
            +D                           GLD S I+SI +  Y+K +       +C+V
Sbjct: 111 SSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRK-MDGFVESSDCSV 170

Query: 137 CLTEFRPEEQLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRD 196
           CL+EF+  E LR +P C+H FH+ CID WL+++ NCPLCR  I   + +  VD       
Sbjct: 171 CLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIV 230

Query: 197 LALNSGSSVDATTADENFVVIELGRNPDRRRPPPFGK-VTSMGDECIDMREKDKEFLVQP 256
              NS      +T D++ VV+ L     R R     +  T    E  D R+ ++      
Sbjct: 231 TENNS-----ISTGDDSVVVVNLDLENSRSRNETVNEGSTPKPPEMQDSRDGEE------ 290

Query: 257 IRRSFSMDSSGD----RQLYMAVQAAVRQSGGGESRVEAEG 268
            RRS S++S G       +   ++     +G G SR   EG
Sbjct: 291 -RRSASLNSGGGVVSIADILREIEDDEESAGVGTSRWVEEG 310

The following BLAST results are available for this feature:

BLAST of CmaCh17G001690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW9	4.4e-65	44.63	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	1.1e-60	43.87	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9LF64	1.9e-20	30.11	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
P0C041	3.7e-19	30.08	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]
Q9SRQ8	8.2e-19	29.89	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of CmaCh17G001690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L4L0	2.7e-166	100.00	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499094 PE...	[more]
A0A6J1H640	5.8e-161	96.28	RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111459948 ...	[more]
A0A5A7VEZ8	9.4e-135	81.17	RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CD01	9.4e-135	81.17	RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103499411 PE=4 SV=1	[more]
A0A0A0LNP5	1.0e-133	81.23	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G178720 P...	[more]

BLAST of CmaCh17G001690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006323.1	5.6e-166	100.00	RING-H2 finger protein ATL16-like [Cucurbita maxima]	[more]
XP_022958779.1	1.2e-160	96.28	RING-H2 finger protein ATL16-like [Cucurbita moschata]	[more]
KAG7013490.1	6.0e-160	95.95	RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6574922.1	6.0e-160	96.28	RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023548943.1	1.0e-159	96.63	RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh17G001690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43420.1	3.1e-66	44.63	RING/U-box superfamily protein	[more]
AT1G04360.1	8.0e-62	43.87	RING/U-box superfamily protein	[more]
AT5G17600.1	1.4e-21	30.11	RING/U-box superfamily protein	[more]
AT4G17905.1	2.6e-20	30.08	RING/U-box superfamily protein	[more]
AT3G03550.1	5.8e-20	29.89	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 109..150 e-value: 2.3E-5 score: 33.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 108..151 e-value: 9.0E-12 score: 45.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 109..151 score: 12.149959
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 72..157 e-value: 1.1E-21 score: 78.3
None	No IPR available	PANTHER	PTHR46913:SF1	RING-H2 FINGER PROTEIN ATL16	coord: 10..295
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 108..151 e-value: 1.29824E-16 score: 70.0233
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 103..158
IPR044600	RING-H2 finger protein ATL1/ATL16	PANTHER	PTHR46913	RING-H2 FINGER PROTEIN ATL16	coord: 10..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G001690.1	CmaCh17G001690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity