CmaCh17G001480 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G001480
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	heterogeneous nuclear ribonucleoprotein 1-like
Location	Cma_Chr17: 726965 .. 730456 (+)
RNA-Seq Expression	CmaCh17G001480
Synteny	CmaCh17G001480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCTCTCTCTCTCTCTCCTCATTCCTCTCTCTCTCTCTCCTCTCTTTGTTCTTCCTTGAAGCCCCCAGTCGGCTACAAACCCTCTTCTCTCTCCATTTCCCCCCTCCGAAATCCTTTCCCCATAACCCAGAAAACGAATTTCAATTTTCAGACCGAAGCTGAGGAAGAACACCCGAATCGATTTCTCCATTCATTTGGGTATCTCGTGAAAACCAGGGAAAGGGGCAATGGATTCGGATCAGGGGAAGCTTTTCATTGGTGGAATTTCATGGGAAACCTCCGAGGATAAGCTTAAGGACTACTTTAGCAACTATGGTGAAGTGATGCATACGGTGGTGATGAGGGATAAGATCACTAGCAGACCTAGAGGGTTTGGGTTCGTCGTTTTCTCAGATCCCTCTGTTCTCGATCGAGTTCTTCAGGATAAGCACACCATCGATGGTAAAACGGTGCGTCAGATTCCCTTTTTTTACTTTCTTCTTTCCATATTTGGAGTTTTGGCCTTTTTGATTTCTGATTTGGCCCTTTTTACGATGATTCTGGTTGGTGCATTGTTTTGTTCATCAGGCGAGGGATTGACAAAAGGGTCCGAGTTGTTCTGTAATTTCATTTCAGCGTAGTTTATGTTTCCAATATGATCTTGAAACATCAGAAATGGGTTGCTATGAATCTGTGGAGTTTATACTTTAATCTTCTGTAGTCATATTTGTTTAGTTACATTTTAGCATTTGTATTTATATTCTTTTATAGGTTGAGGCCAAGAGGGCCTTATCACGGGAAGAACAGCAGACCCCTGCTAGAGCAAGCAATTCTAATGCTACTAGGAATTCTGGTGGTGGTGGTGGAGGAAACATGAGGACTAAAAAAATTTTTGTTGGGGGATTGCCTCCAACATTAACTGAAGAAGGATTTAAAGAGTACTTTGAGGCGTATGGCCATGTAACCGATGTCGTAGTCATGTATGATCAAAATACTAGGCGTCCACGGGGATTTGGATTTATATCGTTTGATACTGAAGAAGCTGTTGACAGGGTTTTGCATAAGACATTTCATGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCTAAAGATGCTAATCCAGGTGCGGGTGGTCATTCAATGGGTGGCAGTGGTTATCAAGGTTATGGGTCTTCTGGTGGTGTTAATTCGAATTCTTATGATAGTCGTATGGATTCGAGTAGGTATATGCAATCTCAGGGCTCTGGTGGAGGGTTCCCACCTTATGGTTCCTCTGGATATAGTAATCCTGGGTATGGGTATGGTTCATCGAACAATGGCATGGGATATGGTGGTTATGGAAGTTACAGCAGTTCGAATACTGGGTATGGCGCCCCTGCAGCTGTAGCCTACGGTAACCCGAATGCTGCTAATGCTGGTTATGGGAGTGGTCCTCAAGGTGGACCGAGAAGTTCATGGTCCACTCAAGCTCCCTCTGGGTATGGAGCCATGGGTTATGGTAATGCTGCTCCTTGGGGTGGTGCTCCTGGAGGCAATGCTGGAGCTGGCAGTGGAGGACCTGGATCTGCACCCACTGGTCATTCTCCTGGTGGAGCTGCTGGGTATGGAAACCAGGGTTATGGATATGGTGGGCTTGGAAATCAAGGTTATGGTTACGGTGGAGGCGATGGCTCGTATGGGAGTCAATCTGGTTATGGTGCAGGTGGAGGACGGTCTGGTAGTGCCTCAAATAGCAACGTCGGGGGTGCTCCAAGTGGGGGAGAGTTACAAGGGAACAGTGGTGGTTACATGGGAAATGGCTATGGGGATGCTAATGGAAACAACACTGGTTATGGAAATGCTGCATGGAGATCTGATGGAGGACAAGTAGGTTATACAGGTGGTTATGCTGGTGGACAAGCTCGGCAAGCCCAACAACAGTAATTCAATGATCAAAAGTAAACTGGATCGTGCCATGTTCTGTGTATCCGTGTTTGTTTTATGAGATCGATGTTTTCAAGTTGCTTATGGAAAAAAAGAGGTTTTCTTGCTGCTGACTGAAACGGTGGCCCGATTTGTAACACAATGAGCCTGGTGGGGTTGCTTGAATCCAAGTAGCTTGCAGTATTAATTTTTCTAGTCTAAAATAAGTAGCTGTTTTAGAAGTTTATTCGATGATGCTTCGGTTATTTAGTATTTTGTTGCGGAACGTAGTTAAATTTGGTCTCTTTATGAATGTCTTTTTTAGCTATCTGTGATCGATTTTCATCTTTTCACTTTGTTTGAGTTGTAACAATTTGTTTCCTACTTATATATTCAGATATTTTTTATGTTTTTCTTGTCCTTTAGATCGTCTAGATCATCTGTCGTAGACGGTATGAAGAACTAGGTGATAGATGTTTCATTCTTTATCTTACATTTGAAGTAGGAATACAAAAGGTGTAGTGTAGTGTAGAGTAGAGAGAGTTGTAGTGATAGATGATAGTGTTGGAGGCCTCGCTATTGGGTCTATCATTTGTATGGTTAGACCTAATCGTAGTCGTAGTTGGCTCTTTAACAATGGCATAATCATTTTCCCCCTCTATTTCCCCTTGTGTTACAGGAGGGATGCCCGGAGTTGTAAAAGTGGAGTCGAGAGAGTCCACTCATGACTGAACACAGGCTTCGTAGTGAAGGACCGTGTTCGGGATGTGTGTGTTCAGCATTTATGGAACTCAAGGGAGGACCTCTAATCGGTTGAAATATTGGATTTACCCCCCCTGGAACCGAATATGTTCTTCTGCAAGGCCTTGCCAACACTATCAAGTATTCCAAATCTCTGGCATTGTGAGTCATTAGTTTATAGTTATTCTTCTCAAGGTTATTGAATCCATTCCTTCAAGACTTGGTTATGTAGGCTACTTGGTATTAACTTGGTATTAACTATGAGTAGGTATTGATTTAAAGCTTCTTAGCCATTTCTCTTCTGTCAATAATTAGCTAACAATAGCCTGTGTAGATTAGCCTGTATAGAATTGCTTCTGCTCTTACCTTTTCTTGTTGGTAAAGTAGCAACTGGTTCAATATATTCCTTTGCTATTTTGCTTCAAGGTCGACGATTTGTCGTAAAGATCTCGGTTTTAGAACTGCTATTAGGTGAATATAATGGTCTTTCTGCTGTTCCTTTGAAGTTTTTTTAACTGCTTTTCGATCCTGTTGGGGGGCGATTATGAATCTAATCTTTCTTTTGTAGATGCCAGTTAATGTTCTTTTCTAGTTGGAGGAAAAATTAGCATTGGTATCAAGTTGGCAGGTCATTGGTATCAAGTTCAATCTTTCTGACCTCTTAAGTAGATATCAAAAAGGGAACACTTCCTTCAGAAATTGAATCAAAAGTTACAATGAAATGTTGAGCTTAATGCATGCAAATTTTAGCTGCTGTCTAGCTGAATTAATTGACAAATGCAATTTTGTTCATTGACCAAATTGAAAAGAATGATCAAATCAATTTAAAAAGCTGGGTTACCTTCGTATGGATTGCTGAA

mRNA sequence

AAGCTCTCTCTCTCTCTCCTCATTCCTCTCTCTCTCTCTCCTCTCTTTGTTCTTCCTTGAAGCCCCCAGTCGGCTACAAACCCTCTTCTCTCTCCATTTCCCCCCTCCGAAATCCTTTCCCCATAACCCAGAAAACGAATTTCAATTTTCAGACCGAAGCTGAGGAAGAACACCCGAATCGATTTCTCCATTCATTTGGGTATCTCGTGAAAACCAGGGAAAGGGGCAATGGATTCGGATCAGGGGAAGCTTTTCATTGGTGGAATTTCATGGGAAACCTCCGAGGATAAGCTTAAGGACTACTTTAGCAACTATGGTGAAGTGATGCATACGGTGGTGATGAGGGATAAGATCACTAGCAGACCTAGAGGGTTTGGGTTCGTCGTTTTCTCAGATCCCTCTGTTCTCGATCGAGTTCTTCAGGATAAGCACACCATCGATGGTAAAACGGTTGAGGCCAAGAGGGCCTTATCACGGGAAGAACAGCAGACCCCTGCTAGAGCAAGCAATTCTAATGCTACTAGGAATTCTGGTGGTGGTGGTGGAGGAAACATGAGGACTAAAAAAATTTTTGTTGGGGGATTGCCTCCAACATTAACTGAAGAAGGATTTAAAGAGTACTTTGAGGCGTATGGCCATGTAACCGATGTCGTAGTCATGTATGATCAAAATACTAGGCGTCCACGGGGATTTGGATTTATATCGTTTGATACTGAAGAAGCTGTTGACAGGGTTTTGCATAAGACATTTCATGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCTAAAGATGCTAATCCAGGTGCGGGTGGTCATTCAATGGGTGGCAGTGGTTATCAAGGTTATGGGTCTTCTGGTGGTGTTAATTCGAATTCTTATGATAGTCGTATGGATTCGAGTAGGTATATGCAATCTCAGGGCTCTGGTGGAGGGTTCCCACCTTATGGTTCCTCTGGATATAGTAATCCTGGGTATGGGTATGGTTCATCGAACAATGGCATGGGATATGGTGGTTATGGAAGTTACAGCAGTTCGAATACTGGGTATGGCGCCCCTGCAGCTGTAGCCTACGGTAACCCGAATGCTGCTAATGCTGGTTATGGGAGTGGTCCTCAAGGTGGACCGAGAAGTTCATGGTCCACTCAAGCTCCCTCTGGGTATGGAGCCATGGGTTATGGTAATGCTGCTCCTTGGGGTGGTGCTCCTGGAGGCAATGCTGGAGCTGGCAGTGGAGGACCTGGATCTGCACCCACTGGTCATTCTCCTGGTGGAGCTGCTGGGTATGGAAACCAGGGTTATGGATATGGTGGGCTTGGAAATCAAGGTTATGGTTACGGTGGAGGCGATGGCTCGTATGGGAGTCAATCTGGTTATGGTGCAGGTGGAGGACGGTCTGGTAGTGCCTCAAATAGCAACGTCGGGGGTGCTCCAAGTGGGGGAGAGTTACAAGGGAACAGTGGTGGTTACATGGGAAATGGCTATGGGGATGCTAATGGAAACAACACTGGTTATGGAAATGCTGCATGGAGATCTGATGGAGGACAAGTAGGTTATACAGGTGGTTATGCTGGTGGACAAGCTCGGCAAGCCCAACAACAGTAATTCAATGATCAAAAGTAAACTGGATCGTGCCATGTTCTGTGTATCCGTGTTTGTTTTATGAGATCGATGTTTTCAAGTTGCTTATGGAAAAAAAGAGGTTTTCTTGCTGCTGACTGAAACGGTGGCCCGATTTGTAACACAATGAGCCTGGAGGGATGCCCGGAGTTGTAAAAGTGGAGTCGAGAGAGTCCACTCATGACTGAACACAGGCTTCGTAGTGAAGGACCGTGTTCGGGATGTGTGTGTTCAGCATTTATGGAACTCAAGGGAGGACCTCTAATCGGTTGAAATATTGGATTTACCCCCCCTGGAACCGAATATGTTCTTCTGCAAGGCCTTGCCAACACTATCAAGTATTCCAAATCTCTGGCATTGTGAGTCATTAGTTTATAGTTATTCTTCTCAAGGTTATTGAATCCATTCCTTCAAGACTTGGTTATGTAGGCTACTTGGTATTAACTTGGTATTAACTATGAGTAGGTATTGATTTAAAGCTTCTTAGCCATTTCTCTTCTGTCAATAATTAGCTAACAATAGCCTGTGTAGATTAGCCTGTATAGAATTGCTTCTGCTCTTACCTTTTCTTGTTGGTAAAGTAGCAACTGGTTCAATATATTCCTTTGCTATTTTGCTTCAAGGTCGACGATTTGTCGTAAAGATCTCGGTTTTAGAACTGCTATTAGGTGAATATAATGGTCTTTCTGCTGTTCCTTTGAAGTTTTTTTAACTGCTTTTCGATCCTGTTGGGGGGCGATTATGAATCTAATCTTTCTTTTGTAGATGCCAGTTAATGTTCTTTTCTAGTTGGAGGAAAAATTAGCATTGGTATCAAGTTGGCAGGTCATTGGTATCAAGTTCAATCTTTCTGACCTCTTAAGTAGATATCAAAAAGGGAACACTTCCTTCAGAAATTGAATCAAAAGTTACAATGAAATGTTGAGCTTAATGCATGCAAATTTTAGCTGCTGTCTAGCTGAATTAATTGACAAATGCAATTTTGTTCATTGACCAAATTGAAAAGAATGATCAAATCAATTTAAAAAGCTGGGTTACCTTCGTATGGATTGCTGAA

Coding sequence (CDS)

ATGGATTCGGATCAGGGGAAGCTTTTCATTGGTGGAATTTCATGGGAAACCTCCGAGGATAAGCTTAAGGACTACTTTAGCAACTATGGTGAAGTGATGCATACGGTGGTGATGAGGGATAAGATCACTAGCAGACCTAGAGGGTTTGGGTTCGTCGTTTTCTCAGATCCCTCTGTTCTCGATCGAGTTCTTCAGGATAAGCACACCATCGATGGTAAAACGGTTGAGGCCAAGAGGGCCTTATCACGGGAAGAACAGCAGACCCCTGCTAGAGCAAGCAATTCTAATGCTACTAGGAATTCTGGTGGTGGTGGTGGAGGAAACATGAGGACTAAAAAAATTTTTGTTGGGGGATTGCCTCCAACATTAACTGAAGAAGGATTTAAAGAGTACTTTGAGGCGTATGGCCATGTAACCGATGTCGTAGTCATGTATGATCAAAATACTAGGCGTCCACGGGGATTTGGATTTATATCGTTTGATACTGAAGAAGCTGTTGACAGGGTTTTGCATAAGACATTTCATGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCTAAAGATGCTAATCCAGGTGCGGGTGGTCATTCAATGGGTGGCAGTGGTTATCAAGGTTATGGGTCTTCTGGTGGTGTTAATTCGAATTCTTATGATAGTCGTATGGATTCGAGTAGGTATATGCAATCTCAGGGCTCTGGTGGAGGGTTCCCACCTTATGGTTCCTCTGGATATAGTAATCCTGGGTATGGGTATGGTTCATCGAACAATGGCATGGGATATGGTGGTTATGGAAGTTACAGCAGTTCGAATACTGGGTATGGCGCCCCTGCAGCTGTAGCCTACGGTAACCCGAATGCTGCTAATGCTGGTTATGGGAGTGGTCCTCAAGGTGGACCGAGAAGTTCATGGTCCACTCAAGCTCCCTCTGGGTATGGAGCCATGGGTTATGGTAATGCTGCTCCTTGGGGTGGTGCTCCTGGAGGCAATGCTGGAGCTGGCAGTGGAGGACCTGGATCTGCACCCACTGGTCATTCTCCTGGTGGAGCTGCTGGGTATGGAAACCAGGGTTATGGATATGGTGGGCTTGGAAATCAAGGTTATGGTTACGGTGGAGGCGATGGCTCGTATGGGAGTCAATCTGGTTATGGTGCAGGTGGAGGACGGTCTGGTAGTGCCTCAAATAGCAACGTCGGGGGTGCTCCAAGTGGGGGAGAGTTACAAGGGAACAGTGGTGGTTACATGGGAAATGGCTATGGGGATGCTAATGGAAACAACACTGGTTATGGAAATGCTGCATGGAGATCTGATGGAGGACAAGTAGGTTATACAGGTGGTTATGCTGGTGGACAAGCTCGGCAAGCCCAACAACAGTAA

Protein sequence

MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGGGFPPYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSGPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGYMGNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ

Homology

[Close]

BLAST of CmaCh17G001480 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 1.2e-122
Identity = 271/458 (59.17%), Postives = 312/458 (68.12%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLF+GGISWET EDKL+++F+NYGEV   +VMRDK+T RPRGFGFV+FSDPSVL
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQ+KH+ID + V+ KRA+SREEQQ   R  N N +R+SGG      +TKKIFVGGLP
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYN--KTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLT+E F++YFE YG VTDV +MYDQ T RPRGFGF+SFD+E+AVD VLHKTFHDL+GK
Sbjct: 121 PTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGK 180

Query: 181 QVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGGGFP 240
           QVEVKRALPKDANPG GG SMGG G  GY   GG N +SYD RMDS+R++Q Q  G G P
Sbjct: 181 QVEVKRALPKDANPGGGGRSMGGGGSGGYQGYGG-NESSYDGRMDSNRFLQHQSVGNGLP 240

Query: 241 PYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSGPQG 300
            YGSSGY   G GYG+ +NG GYG YG Y+ S  GYGA A   YG  N   AGYGS    
Sbjct: 241 SYGSSGY---GAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGV 300

Query: 301 GPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGY 360
            PR+SW T A SGYG  GYG+         G A +G G PG+AP   SP   +GY NQGY
Sbjct: 301 APRNSWDTPASSGYGNPGYGS---------GAAHSGYGVPGAAPPTQSP---SGYSNQGY 360

Query: 361 GYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGYMGNG 420
           GYG       GY G D  YG+Q+ YG  GGR     ++N G           SGGYMG G
Sbjct: 361 GYG-------GYSGSDSGYGNQAAYGVVGGRPSGGGSNNPG-----------SGGYMGGG 411

Query: 421 YGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQ 459
           YGD           +WRSD  Q GY GGY  GQ RQ Q
Sbjct: 421 YGD----------GSWRSDPSQ-GYGGGYNDGQGRQGQ 411

[Close]

BLAST of CmaCh17G001480 vs. ExPASy Swiss-Prot
Match: O88569 (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 4.3e-35
Identity = 134/388 (34.54%), Postives = 187/388 (48.20%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD 66
           KLFIGG+S+ET+E+ L++Y+  +G++   VVMRD  + R RGFGFV FS  + +D  +  
Sbjct: 22  KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLPPTLTE 126
           + H+IDG+ VE KRA++REE   P                G ++  KK+FVGG+     E
Sbjct: 82  RPHSIDGRVVEPKRAVAREESGKP----------------GAHVTVKKLFVGGIKEDTEE 141

Query: 127 EGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVK 186
              ++YFE YG +  + ++ D+ + + RGFGF++FD  + VD+++ + +H +NG   EV+
Sbjct: 142 HHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVR 201

Query: 187 RALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGGGFPPYGSS 246
           +AL +           G  G  G+G                     S+G GG F P   S
Sbjct: 202 KALSRQEMQEVQSSRSGRGGNFGFG--------------------DSRGGGGNFGPGPGS 261

Query: 247 GYSNPGYGYGSSNN-GMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSGPQGGPRS 306
            +     GYGS    G GY GYG                 G P   N G GS   GG R 
Sbjct: 262 NFRGGSDGYGSGRGFGDGYNGYG-----------------GGPGGGNFG-GSPGYGGGRG 321

Query: 307 SWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGS----GGPGSAPTGHSP---GGAAGYGN 366
            +    P GYG  G G    +    GGN G+GS    G     P+ + P   G   G  N
Sbjct: 322 GYGGGGP-GYGNQGGGYGGGYDNYGGGNYGSGSYNDFGNYNQQPSNYGPMKSGNFGGSRN 353

Query: 367 QGYGYGGLGNQGYGYGGGDGSYGSQSGY 386
            G  YGG GN G G  GG G YG +S Y
Sbjct: 382 MGGPYGG-GNYGPGGSGGSGGYGGRSRY 353

[Close]

BLAST of CmaCh17G001480 vs. ExPASy Swiss-Prot
Match: Q2HJ60 (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Bos taurus OX=9913 GN=HNRNPA2B1 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 9.7e-35
Identity = 133/388 (34.28%), Postives = 187/388 (48.20%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD 66
           KLFIGG+S+ET+E+ L++Y+  +G++   VVMRD  + R RGFGFV FS  + +D  +  
Sbjct: 10  KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLPPTLTE 126
           + H+IDG+ VE KRA++REE   P                G ++  KK+FVGG+     E
Sbjct: 70  RPHSIDGRVVEPKRAVAREESGKP----------------GAHVTVKKLFVGGIKEDTEE 129

Query: 127 EGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVK 186
              ++YFE YG +  + ++ D+ + + RGFGF++FD  + VD+++ + +H +NG   EV+
Sbjct: 130 HHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVR 189

Query: 187 RALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGGGFPPYGSS 246
           +AL +           G  G  G+G                     S+G GG F P   S
Sbjct: 190 KALSRQEMQEVQSSRSGRGGNFGFG--------------------DSRGGGGNFGPGPGS 249

Query: 247 GYSNPGYGYGSSNN-GMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSGPQGGPRS 306
            +     GYGS    G GY GYG                 G P   N G GS   GG R 
Sbjct: 250 NFRGGSDGYGSGRGFGDGYNGYG-----------------GGPGGGNFG-GSPGYGGGRG 309

Query: 307 SWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGS----GGPGSAPTGHSP---GGAAGYGN 366
            +    P GYG  G G    +    GGN G+G+    G     P+ + P   G   G  N
Sbjct: 310 GYGGGGP-GYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGSRN 341

Query: 367 QGYGYGGLGNQGYGYGGGDGSYGSQSGY 386
            G  YGG GN G G  GG G YG +S Y
Sbjct: 370 MGGPYGG-GNYGPGGSGGSGGYGGRSRY 341

[Close]

BLAST of CmaCh17G001480 vs. ExPASy Swiss-Prot
Match: P22626 (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens OX=9606 GN=HNRNPA2B1 PE=1 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 9.7e-35
Identity = 133/388 (34.28%), Postives = 187/388 (48.20%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD 66
           KLFIGG+S+ET+E+ L++Y+  +G++   VVMRD  + R RGFGFV FS  + +D  +  
Sbjct: 22  KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLPPTLTE 126
           + H+IDG+ VE KRA++REE   P                G ++  KK+FVGG+     E
Sbjct: 82  RPHSIDGRVVEPKRAVAREESGKP----------------GAHVTVKKLFVGGIKEDTEE 141

Query: 127 EGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVK 186
              ++YFE YG +  + ++ D+ + + RGFGF++FD  + VD+++ + +H +NG   EV+
Sbjct: 142 HHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVR 201

Query: 187 RALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGGGFPPYGSS 246
           +AL +           G  G  G+G                     S+G GG F P   S
Sbjct: 202 KALSRQEMQEVQSSRSGRGGNFGFG--------------------DSRGGGGNFGPGPGS 261

Query: 247 GYSNPGYGYGSSNN-GMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSGPQGGPRS 306
            +     GYGS    G GY GYG                 G P   N G GS   GG R 
Sbjct: 262 NFRGGSDGYGSGRGFGDGYNGYG-----------------GGPGGGNFG-GSPGYGGGRG 321

Query: 307 SWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGS----GGPGSAPTGHSP---GGAAGYGN 366
            +    P GYG  G G    +    GGN G+G+    G     P+ + P   G   G  N
Sbjct: 322 GYGGGGP-GYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGSRN 353

Query: 367 QGYGYGGLGNQGYGYGGGDGSYGSQSGY 386
            G  YGG GN G G  GG G YG +S Y
Sbjct: 382 MGGPYGG-GNYGPGGSGGSGGYGGRSRY 353

[Close]

BLAST of CmaCh17G001480 vs. ExPASy Swiss-Prot
Match: P48809 (Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster OX=7227 GN=Hrb27C PE=1 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 1.3e-34
Identity = 147/422 (34.83%), Postives = 207/422 (49.05%), Query Frame = 0


Query: 2   DSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLD 61
           + ++GKLF+GG+SWET+++ L  YF  +G+++  VVM++  + R RGFGFV F+DP+ ++
Sbjct: 3   EDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVN 62

Query: 62  RVLQD-KHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 121
            VLQ+  HT+DG+T++ K    R  Q+              GGG        K+F+GGLP
Sbjct: 63  HVLQNGPHTLDGRTIDPKPCNPRTLQKP-----------KKGGG-------YKVFLGGLP 122

Query: 122 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 181
             +TE   + +F  YG VT+VV+MYDQ  ++ RGFGF+SF+ E +V+ V ++ + +LNGK
Sbjct: 123 SNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGK 182

Query: 182 QVEVKRALPKDANPGAGGHSMGGSGYQG-YGSSGGVNSNSYDSRMDSSRYMQSQGSGGGF 241
           QVE+K+A P+D   G+GG +   S   G YG  G   S+        +      G  GG 
Sbjct: 183 QVEIKKAEPRD---GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGP 242

Query: 242 PPYGSSGYSN--PGY-GYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAAN----- 301
           P     G  N  PGY G+G+S     YG   S   S  G+GAP       P  +N     
Sbjct: 243 PLNMPIGAPNMMPGYQGWGTSPQQQQYGYGNSGPGSYQGWGAPPGPQGPPPQWSNYAGPQ 302

Query: 302 --AGYGSGPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSG----------- 361
              GYG        S+ +   PSG G+    N  P    P G  GAG+G           
Sbjct: 303 QTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPNSAGPTGAPGAGAGTATDMYSRAQA 362

Query: 362 ---------GPGSAPTGHSPGGAAGYGNQGYGYGGLGNQGYGYGGGDGSYGSQSG---YG 389
                    GP        PG +A      Y YGG G+   GY     +Y  Q G   YG
Sbjct: 363 WATGGPSTTGPVGGMPRTGPGNSASKSGSEYDYGGYGS---GYDYDYSNYVKQEGASNYG 400

[Close]

BLAST of CmaCh17G001480 vs. ExPASy TrEMBL
Match: A0A6J1KWS0 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498928 PE=4 SV=1)

HSP 1 Score: 864.4 bits (2232), Expect = 2.2e-247
Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK
Sbjct: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180

Query: 181 QVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGGGFP 240
           QVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGGGFP
Sbjct: 181 QVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGGGFP 240

Query: 241 PYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSGPQG 300
           PYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSGPQG
Sbjct: 241 PYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSGPQG 300

Query: 301 GPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGY 360
           GPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGY
Sbjct: 301 GPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGY 360

Query: 361 GYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGYMGNG 420
           GYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGYMGNG
Sbjct: 361 GYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGYMGNG 420

Query: 421 YGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461
           YGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 YGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 460

[Close]

BLAST of CmaCh17G001480 vs. ExPASy TrEMBL
Match: A0A6J1H3Z2 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460283 PE=4 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 4.7e-242
Identity = 452/461 (98.05%), Postives = 454/461 (98.48%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNS-GGGGGGNMRTKKIFVGGL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNS GGGGGGNMRTKKIFVGGL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGGNMRTKKIFVGGL 120

Query: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180
           PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG
Sbjct: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180

Query: 181 KQVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGGGF 240
           KQVEVKRALPKDANPGAGG SMGG GYQGYGSSGGVNSNSYDS MDSSRYMQSQGSGGGF
Sbjct: 181 KQVEVKRALPKDANPGAGGRSMGGGGYQGYGSSGGVNSNSYDSHMDSSRYMQSQGSGGGF 240

Query: 241 PPYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSGPQ 300
           PPYGSSGYSNPGYGYGSSNNGMGYGGYG+YS SNTGYGAPAAVAYGNPNAANAGYGSGPQ
Sbjct: 241 PPYGSSGYSNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNAANAGYGSGPQ 300

Query: 301 GGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 301 GGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360

Query: 361 YGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGYMGN 420
           YGYGGLGNQGYGYGGGDGSYGSQSGYG GGGRSGSASNSNVGG PSGGE+QGNSGGYMGN
Sbjct: 361 YGYGGLGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGEIQGNSGGYMGN 420

Query: 421 GYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461
           GYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 GYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461

[Close]

BLAST of CmaCh17G001480 vs. ExPASy TrEMBL
Match: A0A6J1CDB1 (heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN=LOC111009685 PE=4 SV=1)

HSP 1 Score: 798.9 bits (2062), Expect = 1.1e-227
Identity = 430/465 (92.47%), Postives = 443/465 (95.27%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYF NYG+V+HTVVMRDKITSRPRGFGFVVF+DP++L
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFGNYGDVLHTVVMRDKITSRPRGFGFVVFADPAIL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGG-GGGNMRTKKIFVGGL 120
           DRVLQ+KHTIDGKTVEAKRALSREEQQTPARA NSNATRNSGGG GGG+MRTKKIFVGGL
Sbjct: 61  DRVLQEKHTIDGKTVEAKRALSREEQQTPARAGNSNATRNSGGGSGGGSMRTKKIFVGGL 120

Query: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180
           PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG
Sbjct: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180

Query: 181 KQVEVKRALPKDANPGAGGHSM----GGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGS 240
           KQVEVKRALPKDANPGAGG SM    GG GYQ YGSSGG NSNSYD+RMDS+RYMQSQGS
Sbjct: 181 KQVEVKRALPKDANPGAGGRSMGGGAGGGGYQSYGSSGGANSNSYDNRMDSNRYMQSQGS 240

Query: 241 GGGFPPYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYG 300
            GGFPPYGSSGY+NPGYGYGSSNNGMGYGGYG+YS SNTGYGAPAAVAYGNPN ANAGYG
Sbjct: 241 SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYG 300

Query: 301 SGPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGY 360
           SGPQGGPRS+WS QAPSGYGAMGYGNAAPWGGA G NAGAGSGGPGSAPTGHSPGGAAGY
Sbjct: 301 SGPQGGPRSTWSGQAPSGYGAMGYGNAAPWGGAAGNNAGAGSGGPGSAPTGHSPGGAAGY 360

Query: 361 GNQGYGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGG 420
           GNQGYGYGG GNQGYGYGGGDGSYGSQSGYGA GGRSGSASNSNVGG PSGGELQGNSGG
Sbjct: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGAAGGRSGSASNSNVGGGPSGGELQGNSGG 420

Query: 421 YMGNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461
           YMGNGYGDANG N+GYGNAAWRSDGGQVGYTGGYA GQARQAQQQ
Sbjct: 421 YMGNGYGDANG-NSGYGNAAWRSDGGQVGYTGGYAAGQARQAQQQ 464

[Close]

BLAST of CmaCh17G001480 vs. ExPASy TrEMBL
Match: A0A0A0LLG6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171930 PE=4 SV=1)

HSP 1 Score: 792.7 bits (2046), Expect = 8.0e-226
Identity = 433/465 (93.12%), Postives = 441/465 (94.84%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 107 MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 166

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSN  RNSGG GGGNMRTKKIFVGGLP
Sbjct: 167 DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNG-RNSGGSGGGNMRTKKIFVGGLP 226

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK
Sbjct: 227 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 286

Query: 181 QVEVKRALPKDANPGAGGHSM----GGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSG 240
           QVEVKRALPKDANPGAGG +M    G  GYQGYGSSGGVNSNSYD+RMDS+RYMQSQGS 
Sbjct: 287 QVEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSS 346

Query: 241 GGFPPYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGS 300
           GGFPPYGSSGY+NP YGYGSSNNGMGYGGYG+YS SNTG+GAP AVAYGNPN ANAGYGS
Sbjct: 347 GGFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGS 406

Query: 301 GPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGG-AAGY 360
           GPQGGPR+SWS QAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGG AAGY
Sbjct: 407 GPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGY 466

Query: 361 GNQGYGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGG 420
           GNQGYGYGG GNQGYGYGGGDGSYGSQSGYG  GGRSGSASNSNVGG PSGGELQGN+  
Sbjct: 467 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNN-A 526

Query: 421 YMGNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461
           YMGNGYGDANG NTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 527 YMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 568

[Close]

BLAST of CmaCh17G001480 vs. ExPASy TrEMBL
Match: A0A6J1KMT7 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111494753 PE=4 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 1.8e-225
Identity = 428/464 (92.24%), Postives = 439/464 (94.61%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKD+F++YGEVMHTVVMRDKITS+PRGFGFVVF+DPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARA N NATRNS   GGGNMRTKKIFVGGLP
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNS---GGGNMRTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLTEEGFKEYFE YG VTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK
Sbjct: 121 PTLTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180

Query: 181 QVEVKRALPKDANPGAGGHSMGGS----GYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSG 240
           QVEVKRALPKDANPGAGG SMGGS    GYQ YGSSGGVNSNSYDSRMDS+RYMQSQGS 
Sbjct: 181 QVEVKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSS 240

Query: 241 GGFPPYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGS 300
           GGFPPYGSSGY+NPGYGYGSSNNGMGYGGYG+YS SNTGYGAP+AVAYGNPN ANAGY S
Sbjct: 241 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYAS 300

Query: 301 GPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYG 360
           GPQGGPRSSWS QAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYG
Sbjct: 301 GPQGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYG 360

Query: 361 NQGYGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGY 420
           NQGYGYGG GNQGYGYGGGDGSYGSQSGYG GGGRSGSASNSNVGG PSGGELQGNSGGY
Sbjct: 361 NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGY 420

Query: 421 MGNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461
           M +GYGDANG NTGYGNA WRSDGGQVGYTGGY GGQARQ+QQQ
Sbjct: 421 MNSGYGDANG-NTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 460

[Close]

BLAST of CmaCh17G001480 vs. NCBI nr
Match: XP_023006071.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima])

HSP 1 Score: 864.4 bits (2232), Expect = 4.5e-247
Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK
Sbjct: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180

Query: 181 QVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGGGFP 240
           QVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGGGFP
Sbjct: 181 QVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGGGFP 240

Query: 241 PYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSGPQG 300
           PYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSGPQG
Sbjct: 241 PYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSGPQG 300

Query: 301 GPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGY 360
           GPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGY
Sbjct: 301 GPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGY 360

Query: 361 GYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGYMGNG 420
           GYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGYMGNG
Sbjct: 361 GYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGYMGNG 420

Query: 421 YGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461
           YGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 YGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 460

[Close]

BLAST of CmaCh17G001480 vs. NCBI nr
Match: KAG7013472.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 847.8 bits (2189), Expect = 4.3e-242
Identity = 453/463 (97.84%), Postives = 455/463 (98.27%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNS---GGGGGGNMRTKKIFVG 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNS   GGGGGGNMRTKKIFVG
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGGGGNMRTKKIFVG 120

Query: 121 GLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDL 180
           GLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDL
Sbjct: 121 GLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDL 180

Query: 181 NGKQVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGG 240
           NGKQVEVKRALPKDANPGAGG SMGG GYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGG
Sbjct: 181 NGKQVEVKRALPKDANPGAGGRSMGGGGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGG 240

Query: 241 GFPPYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSG 300
           GFPPYGSSGYSNPGYGYGSSNNGMGYGGYG+YS SNTGYGAPAAVAYGNPNAANAGYGSG
Sbjct: 241 GFPPYGSSGYSNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNAANAGYGSG 300

Query: 301 PQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGN 360
           PQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGN
Sbjct: 301 PQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGN 360

Query: 361 QGYGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGYM 420
           QGYGYGGLGNQGYGYGGGDGSYGSQSGYG GGGRSGSASNSNVGG PSGGE+QGNSGGYM
Sbjct: 361 QGYGYGGLGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGEIQGNSGGYM 420

Query: 421 GNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461
           GNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 GNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463

[Close]

BLAST of CmaCh17G001480 vs. NCBI nr
Match: XP_022959237.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata])

HSP 1 Score: 846.7 bits (2186), Expect = 9.7e-242
Identity = 452/461 (98.05%), Postives = 454/461 (98.48%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNS-GGGGGGNMRTKKIFVGGL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNS GGGGGGNMRTKKIFVGGL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGGNMRTKKIFVGGL 120

Query: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180
           PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG
Sbjct: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180

Query: 181 KQVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGGGF 240
           KQVEVKRALPKDANPGAGG SMGG GYQGYGSSGGVNSNSYDS MDSSRYMQSQGSGGGF
Sbjct: 181 KQVEVKRALPKDANPGAGGRSMGGGGYQGYGSSGGVNSNSYDSHMDSSRYMQSQGSGGGF 240

Query: 241 PPYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSGPQ 300
           PPYGSSGYSNPGYGYGSSNNGMGYGGYG+YS SNTGYGAPAAVAYGNPNAANAGYGSGPQ
Sbjct: 241 PPYGSSGYSNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNAANAGYGSGPQ 300

Query: 301 GGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 301 GGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360

Query: 361 YGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGYMGN 420
           YGYGGLGNQGYGYGGGDGSYGSQSGYG GGGRSGSASNSNVGG PSGGE+QGNSGGYMGN
Sbjct: 361 YGYGGLGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGEIQGNSGGYMGN 420

Query: 421 GYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461
           GYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 GYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461

[Close]

BLAST of CmaCh17G001480 vs. NCBI nr
Match: KAG6574899.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 846.3 bits (2185), Expect = 1.3e-241
Identity = 452/463 (97.62%), Postives = 454/463 (98.06%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNS---GGGGGGNMRTKKIFVG 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNS   GGGGGGNMRTKKIFVG
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGGGGNMRTKKIFVG 120

Query: 121 GLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDL 180
           GLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDL
Sbjct: 121 GLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDL 180

Query: 181 NGKQVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGG 240
           NGKQVEVKRALPKDANPGAGG SMGG GYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGG
Sbjct: 181 NGKQVEVKRALPKDANPGAGGRSMGGGGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGG 240

Query: 241 GFPPYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSG 300
           GFPPYGSSGYSNPGYGYGSSNNGMGYGGYG+YS SNTGYGAPAAVAYGNPNAANAGYGSG
Sbjct: 241 GFPPYGSSGYSNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNAANAGYGSG 300

Query: 301 PQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGN 360
           PQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAG GGPGSAPTGHSPGGAAGYGN
Sbjct: 301 PQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGGGGPGSAPTGHSPGGAAGYGN 360

Query: 361 QGYGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGYM 420
           QGYGYGGLGNQGYGYGGGDGSYGSQSGYG GGGRSGSASNSNVGG PSGGE+QGNSGGYM
Sbjct: 361 QGYGYGGLGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGEIQGNSGGYM 420

Query: 421 GNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461
           GNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 GNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463

[Close]

BLAST of CmaCh17G001480 vs. NCBI nr
Match: XP_023548146.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 844.7 bits (2181), Expect = 3.7e-241
Identity = 452/467 (96.79%), Postives = 455/467 (97.43%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNS-------GGGGGGNMRTKK 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNS       GGGGGGNMRTKK
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGGGGGGGGNMRTKK 120

Query: 121 IFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKT 180
           IFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKT
Sbjct: 121 IFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKT 180

Query: 181 FHDLNGKQVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQ 240
           FHDLNGKQVEVKRALPKDANPGAGG SMGG GYQGYGSSGGVNSNSYDSRMDSSRYMQSQ
Sbjct: 181 FHDLNGKQVEVKRALPKDANPGAGGRSMGGGGYQGYGSSGGVNSNSYDSRMDSSRYMQSQ 240

Query: 241 GSGGGFPPYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAG 300
           GSGGGFPPYGSSGYSNPGYGYGSSNNGMGYGGYG+YS SNTGYGAPAAVAYGNPNAANAG
Sbjct: 241 GSGGGFPPYGSSGYSNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNAANAG 300

Query: 301 YGSGPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAA 360
           YGSGPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAA
Sbjct: 301 YGSGPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAA 360

Query: 361 GYGNQGYGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNS 420
           GYGNQGYGYGGLGNQGYGYGGGDGSYGSQSGYG GGGRSGSASNSNVGG PSGGE+QGNS
Sbjct: 361 GYGNQGYGYGGLGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGEIQGNS 420

Query: 421 GGYMGNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461
           GGYMGNGYGDANGNN+GYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 GGYMGNGYGDANGNNSGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 467

[Close]

BLAST of CmaCh17G001480 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 441.4 bits (1134), Expect = 8.7e-124
Identity = 271/458 (59.17%), Postives = 312/458 (68.12%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLF+GGISWET EDKL+++F+NYGEV   +VMRDK+T RPRGFGFV+FSDPSVL
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQ+KH+ID + V+ KRA+SREEQQ   R  N N +R+SGG      +TKKIFVGGLP
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYN--KTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLT+E F++YFE YG VTDV +MYDQ T RPRGFGF+SFD+E+AVD VLHKTFHDL+GK
Sbjct: 121 PTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGK 180

Query: 181 QVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSGGGFP 240
           QVEVKRALPKDANPG GG SMGG G  GY   GG N +SYD RMDS+R++Q Q  G G P
Sbjct: 181 QVEVKRALPKDANPGGGGRSMGGGGSGGYQGYGG-NESSYDGRMDSNRFLQHQSVGNGLP 240

Query: 241 PYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGSGPQG 300
            YGSSGY   G GYG+ +NG GYG YG Y+ S  GYGA A   YG  N   AGYGS    
Sbjct: 241 SYGSSGY---GAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGV 300

Query: 301 GPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGY 360
            PR+SW T A SGYG  GYG+         G A +G G PG+AP   SP   +GY NQGY
Sbjct: 301 APRNSWDTPASSGYGNPGYGS---------GAAHSGYGVPGAAPPTQSP---SGYSNQGY 360

Query: 361 GYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGYMGNG 420
           GYG       GY G D  YG+Q+ YG  GGR     ++N G           SGGYMG G
Sbjct: 361 GYG-------GYSGSDSGYGNQAAYGVVGGRPSGGGSNNPG-----------SGGYMGGG 411

Query: 421 YGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQ 459
           YGD           +WRSD  Q GY GGY  GQ RQ Q
Sbjct: 421 YGD----------GSWRSDPSQ-GYGGGYNDGQGRQGQ 411

[Close]

BLAST of CmaCh17G001480 vs. TAIR 10
Match: AT2G33410.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 432.2 bits (1110), Expect = 5.3e-121
Identity = 271/464 (58.41%), Postives = 319/464 (68.75%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           M+SDQGKLFIGGISW+T E+ L++YFSN+GEV+   VMR+K T RPRGFGFV FSDP+V+
Sbjct: 1   MESDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVI 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQDKH ID + V+ KRA+SREEQ    R+   NA+RN     G N+RTKKIFVGGLP
Sbjct: 61  DRVLQDKHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNF--DSGANVRTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           P LT + F+ YFE YG V+D V+M DQ T+RPRGFGF+SFD+E++VD VLHKTFHDLNGK
Sbjct: 121 PALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGK 180

Query: 181 QVEVKRALPKDANPG---AGGHSMGGS-GYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSG 240
           QVEVKRALPKDANPG    GG   GG+ G+ GYG SGG   + Y+ R+DS+RYMQ Q +G
Sbjct: 181 QVEVKRALPKDANPGIASGGGRGSGGAGGFPGYGGSGG---SGYEGRVDSNRYMQPQNTG 240

Query: 241 GGFPPYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGS 300
            G+PPYG SGY   GYGYGS  NG+GYGG+G       GYG PA   YGNP+   AG+GS
Sbjct: 241 SGYPPYGGSGYGT-GYGYGS--NGVGYGGFG-------GYGNPAGAPYGNPSVPGAGFGS 300

Query: 301 GPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYG 360
               GPRSSW  QAPSGYG +GYGNAAPWG         GSGGPGSA  G + G +AGY 
Sbjct: 301 ----GPRSSWGAQAPSGYGNVGYGNAAPWG---------GSGGPGSAVMGQA-GASAGY- 360

Query: 361 NQGYGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGY 420
                    G+QGYGYGG D SYG+ S YGA GGRSG+  N++ GG              
Sbjct: 361 ---------GSQGYGYGGNDSSYGTPSAYGAVGGRSGNMPNNHGGG-------------- 404

Query: 421 MGNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461
              GY DA   + GYGN   + + GQ GY GGY  G  RQAQQQ
Sbjct: 421 ---GYADALDGSGGYGN--HQGNNGQAGYGGGY--GSGRQAQQQ 404

[Close]

BLAST of CmaCh17G001480 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 209.5 bits (532), Expect = 5.6e-54
Identity = 198/485 (40.82%), Postives = 266/485 (54.85%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           M SD GKLFIGGISW+T+E++LK+YFS++GEV+  V+++D+ T R RGFGFVVF+DP+V 
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           + V+ +KH IDG+ VEAK+A+ R++Q    R SNS++ + S GG G   RT+KIFVGGLP
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNR-SNSSSIQGSPGGPG---RTRKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
            ++TE  FK YFE +G  TDVVVMYD NT+RPRGFGFI++D+EEAV++VL KTFH+LNGK
Sbjct: 121 SSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGK 180

Query: 181 QVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVN--SNSYDSRMDSSRYMQSQGSG-- 240
            VEVKRA+PK+ +PG     +G       G S GVN  +N  +            G G  
Sbjct: 181 MVEVKRAVPKELSPGPSRSPLGA------GYSYGVNRVNNLLNGYAQGFNPAAVGGYGLR 240

Query: 241 --GGFPPYGS--SGYSNPGYGYGSSNN-----GMGYGGYGSYSSSNTGYGAPAAVAY-GN 300
             G F P G+  SG++N   GYG + N       G+ G G+  + N  YG   +  Y GN
Sbjct: 241 MDGRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTG-GTNYNGNVDYGRGMSPYYIGN 300

Query: 301 PN--AANAGYGSGPQGGPRSSWSTQAPSGYGAMG-----------YGNAAPWGGAPGGNA 360
            N      GY  G  GG  S +S+   + +G  G             N    G + G N 
Sbjct: 301 TNRFGPAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNT 360

Query: 361 GAGSGGPGSAPTGHSPGGAAGYGNQG--YGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGR 420
            +G  G      G   GG     N+   +GYGG G  G+G G G        GY A    
Sbjct: 361 LSGPFGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTG--------GYAARNPG 420

Query: 421 SGSASNSNVGGAPSGGELQGNSGGYMGNGYGDANGNNTGYGNAAWRS----DGGQVGYTG 453
           +  A+ S+   + S      N+ GY   G  +  GN   Y +  WRS      G   ++ 
Sbjct: 421 ANKAAPSSSFSSASA----TNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSY 462

[Close]

BLAST of CmaCh17G001480 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 209.5 bits (532), Expect = 5.6e-54
Identity = 198/485 (40.82%), Postives = 266/485 (54.85%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           M SD GKLFIGGISW+T+E++LK+YFS++GEV+  V+++D+ T R RGFGFVVF+DP+V 
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           + V+ +KH IDG+ VEAK+A+ R++Q    R SNS++ + S GG G   RT+KIFVGGLP
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNR-SNSSSIQGSPGGPG---RTRKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
            ++TE  FK YFE +G  TDVVVMYD NT+RPRGFGFI++D+EEAV++VL KTFH+LNGK
Sbjct: 121 SSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGK 180

Query: 181 QVEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGVN--SNSYDSRMDSSRYMQSQGSG-- 240
            VEVKRA+PK+ +PG     +G       G S GVN  +N  +            G G  
Sbjct: 181 MVEVKRAVPKELSPGPSRSPLGA------GYSYGVNRVNNLLNGYAQGFNPAAVGGYGLR 240

Query: 241 --GGFPPYGS--SGYSNPGYGYGSSNN-----GMGYGGYGSYSSSNTGYGAPAAVAY-GN 300
             G F P G+  SG++N   GYG + N       G+ G G+  + N  YG   +  Y GN
Sbjct: 241 MDGRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTG-GTNYNGNVDYGRGMSPYYIGN 300

Query: 301 PN--AANAGYGSGPQGGPRSSWSTQAPSGYGAMG-----------YGNAAPWGGAPGGNA 360
            N      GY  G  GG  S +S+   + +G  G             N    G + G N 
Sbjct: 301 TNRFGPAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNT 360

Query: 361 GAGSGGPGSAPTGHSPGGAAGYGNQG--YGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGR 420
            +G  G      G   GG     N+   +GYGG G  G+G G G        GY A    
Sbjct: 361 LSGPFGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTG--------GYAARNPG 420

Query: 421 SGSASNSNVGGAPSGGELQGNSGGYMGNGYGDANGNNTGYGNAAWRS----DGGQVGYTG 453
           +  A+ S+   + S      N+ GY   G  +  GN   Y +  WRS      G   ++ 
Sbjct: 421 ANKAAPSSSFSSASA----TNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSY 462

[Close]

BLAST of CmaCh17G001480 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 205.7 bits (522), Expect = 8.1e-53
Identity = 184/442 (41.63%), Postives = 243/442 (54.98%), Query Frame = 0


Query: 3   SDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDR 62
           SD GKLFIGGISW+T E++L++YF  YG+++  V+MRD+ T R RGFGF+VF+DPSV +R
Sbjct: 12  SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71

Query: 63  VLQDKHTIDGKTVEAKRALSREEQQTPAR-ASNSNATRNSGGGGGGNMRTKKIFVGGLPP 122
           V+ DKH IDG+TVEAK+A+ R++QQ   R AS  +    S GG GG  RTKKIFVGGLP 
Sbjct: 72  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 131

Query: 123 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 182
           ++TE  FK YF+ +G + DVVVMYD NT+RPRGFGFI+FD+EE+VD VLHKTFH+LNGK 
Sbjct: 132 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 191

Query: 183 VEVKRALPKDANPGAGGHSMGGSGYQGYGSSGGV-----NSNSYDSRMDSSRYMQSQGSG 242
           VEVKRA+PK+ +      +   S   GYG++ GV     ++NSY +         + GS 
Sbjct: 192 VEVKRAVPKELS----STTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLGSA 251

Query: 243 GGFPPYGSSGYSNPGYGYG-------SSN---NGMGY----GGYGSYSSSNTGYGAPAAV 302
           G F P GS   +   +G G       +SN   N +GY    G     S+S   Y +P   
Sbjct: 252 GRFSPIGSGRNAFSSFGLGLNQELNLNSNFDGNTLGYSRIPGNQYFNSASPNRYNSPIGY 311

Query: 303 AYG----NPNAANAGYGSGPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSG 362
             G    NP+  +         GP  +      +  G  G  +        G + GAGSG
Sbjct: 312 NRGDSAYNPSNRDLWGNRSDSSGPGWNLGVSVGNNRGNWGLSSVVSDNNGYGRSYGAGSG 371

Query: 363 GPGSAPTGHSPGGAAGYGNQGYGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNS 420
             G +  G++ G     G+ G  Y G              +   S    G  RS      
Sbjct: 372 LSGLSFAGNTNGFD---GSIGELYRGSSVYSDSTWQQSMPHHQSSNELDGLSRSYGFGID 431

The following BLAST results are available for this feature:

BLAST of CmaCh17G001480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	1.2e-122	59.17	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
O88569	4.3e-35	34.54	Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnp...	[more]
Q2HJ60	9.7e-35	34.28	Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Bos taurus OX=9913 GN=HNRNPA2B...	[more]
P22626	9.7e-35	34.28	Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens OX=9606 GN=HNRNPA...	[more]
P48809	1.3e-34	34.83	Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster OX=7227 G...	[more]

BLAST of CmaCh17G001480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KWS0	2.2e-247	100.00	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1H3Z2	4.7e-242	98.05	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1CDB1	1.1e-227	92.47	heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN...	[more]
A0A0A0LLG6	8.0e-226	93.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171930 PE=4 SV=1	[more]
A0A6J1KMT7	1.8e-225	92.24	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of CmaCh17G001480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006071.1	4.5e-247	100.00	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima]	[more]
KAG7013472.1	4.3e-242	97.84	Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp...	[more]
XP_022959237.1	9.7e-242	98.05	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata]	[more]
KAG6574899.1	1.3e-241	97.62	Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp...	[more]
XP_023548146.1	3.7e-241	96.79	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh17G001480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14300.1	8.7e-124	59.17	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G33410.1	5.3e-121	58.41	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	5.6e-54	40.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	5.6e-54	40.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	8.1e-53	41.63	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..78 e-value: 6.0E-20 score: 82.3 coord: 113..185 e-value: 6.0E-25 score: 98.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 8..75 e-value: 1.1E-14 score: 54.0 coord: 114..172 e-value: 5.2E-16 score: 58.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 112..189 score: 18.580891
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..82 score: 16.84124
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..85 e-value: 3.5E-24 score: 86.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 86..207 e-value: 3.4E-27 score: 97.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 385..406
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 331..350
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 381..422
None	No IPR available	PANTHER	PTHR48035	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1	coord: 1..458
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 8..78 e-value: 2.04222E-36 score: 126.546
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 110..189 e-value: 2.85031E-45 score: 150.594
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 111..215
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G001480.1	CmaCh17G001480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding