CmaCh17G001320 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G001320
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Auxin-responsive protein
Location	Cma_Chr17: 688600 .. 692266 (-)
RNA-Seq Expression	CmaCh17G001320
Synteny	CmaCh17G001320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTATGAGTGGTAGGCGCACCACCAGACATCCTGACCCCATCGCTTCTTCTCTCTGTGCTCTGTTTTTCATCCTTTCCTCTGTTTTTCAATACCTTCTTAATCCCCTCCCCTTCTTCCATTCTCTCTAACCTTCCCTTTCTAATTCTCTGTTTCTTCAATGGAATGTACTTTGGGCCTTTTCCGCACTTCTGGCGTTGGTGGGTCTGTTTCTGGGTCCGCCATTAACGACCCCAATGAGCCTAGAATGAAGATTTTTGAGAAAGATTTTGTGGGTAAGATTCCGATTGAGCCGTCTCCTTGTCCTGCCTCCTCTGGCCTTGAATTGGGCCTTGGTTTAGCCGTTGGCGGCTGCGGGAAGGTTAGCGGTGGTACTTGGGGTGAGCGTGGTCGGATTTTGACTGCTCGGGATTTCCCTGTTCTTGGTGGCTCTTCTGTTTCTTCTTGTTCTTCCTCTTCTTGTTTCCATGGAAGAGAGGGTAATGGTTCTGTTGCTGTTTCTGGGACTAAACGAGCTGCTGATTCTGCTCCTAATGATGGAGGATCCCCCACTGCTCTCAAGTTAGTTCTGATTATCCCCTTTTGTTTGTTCTTATAGCTATAAATTTACTGAAATTAAGATTGCTGTAAGAGAGTACGCGTTAGCTAATTTAGGGAATGATTATACGTTTATAAGGAATACTATCTCCATTGGTATGAGACCTTTTGGGGAAGCCTTAAGCAAACCCATGAGAGCTTATGCTCAAAGTGAACAATATTATGCCATTGTGGAGGTTCGTGATTACTAACATAGTATTAGAATCATGCCCTTAACTTAGATATGTCAATAGAATCCTCAAATGTCAGAACAAAGAAATTGCTAGCCTCGAAAGTGTAGTCAAAAGTTCGAACAAATGGTGTACTTTGTCAGAGTGCTCCAAAGAAAGGAGTCGAGCCTCAATTAAGGGGAGGTTGTTCGAGGGCTACATAGACCTCAGGGGAGGCACTATGGTGTACTTTGTTCGAGGGGAGGATTGTTGAGGATGGTTAGGAATGCATCTCCAATAGTATGAGGCATTTTGGGGAAACCAAAAGCAAAACCATGAGAGCTATTGCTCAAAGTGGACAATATCATGTCATTGTAGAGGTTTGTGATTCCTAACATGGTATCAAACTTAGCCATGTCAACAGAATTCTCAAGTGTCGAACAAAGAAATTGCTAGCCTCGAAGGTGTAGTCAAGAGTGACTCTGTGTCGAACAAATGGTGTACTTTGTTCGAGGGCTCTAGAGAAAGGAGTCGAGTCTCAACTAAGGGGAGGCTGTTCGAGGGCTACATAGACTTCAGGAGAGGCTCTATAGTGTACTTTGTTCGAGAGGAGGATTGTTGAGGATGATTAGGAATATATCTCTATTGATATGAGGCCTTTTGGGGAAACCAGAAGCAAAACCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGAAGAGCCGTGATTCCTAACTGGAAAAACGATGGATTAATTTAGACTTTTGAGTCCTTTTCTGATGAGCTTGTTGTAAATGTTTGTTTGAAAATGGAAGCAGTCAGGTTGTGGGATGGCCACCCATTAGGACATACAGGATGAACAGCTTGGTGAACCAAGCAAAGACAGCCAGGGCTGAGGAAGATGAGCAGTCCAAGGACAACAAAGCATGTGATGTTGATGGAAAAGGGCACCTAGGATTTGTCAAAGTGAATGTCGATGGGGTTGTCATAGGGAGGAAAGTGGATATCAATGCCCATTCTTGCTATGAGACCTTGGCCCTTATGCTGGAGGACATGTTTTTCAAGTCCAATGGTTAGCTCTTGAAATTTCCAGGAACAAATATCTTCATTTTTTGCTTTGATTTATTTGTATGGTCATGGTGTTCTTCAGGGAAAAGTGGAGACAAAGAACAAGGACAGAAACTGTCTAAGCTTTTGGATGGATCCTCTGAGTTTGTGCTTACATATGAAGATAGAGAGGGGGATTGGATGCTTGTTGGAGATGTCCCTTGGAGGTATGTTTCTTTGTAGTCTAGATCTAATATCTATGTTGAGTTATGATCAGCTGTATCGATGCCCGGATGCACGGTTTTGACTCTTGGTTCTAAAATCTTGCTAACTTTTTTAAGAACGGAGAAAAAAGTTGAGCTAGTTTGATGAAAATTGGCATACTTAAGTTCCCTTTTAGTTCATGGAGTTCAGTCTATTGTGTCTTACGAACGAGGAAGATAACTTACTAAATGGTTCGAGATTTGAGAGGAACGTTTATGTATCTGATCTCAATTGTCTAGATCAATGCATTGTTGGCTCTTGTTTCTAAAAGTCTTGTTATGTTTTAAACATTTGAACTGTGTCCCTGTGATGTCCCACATTGGTTGGAGAGGAGAACAAAACACCTTTTATAAGGATGTGGAAACCTTCCCCTAACATACGCGTTTTAAAGCTTTGAGGGAAAGCTCAAAAAGGACAATATCGGCTAGTGGTGGGTCTGGGTTGTTAGAGTTCCACTTTTATGTTGTTCTTACAATAAGTTCATGACTTTCATTGATTAGGATGTTTTTGAGCTCTGTTCGAAGGCTTCGTATAATGAGGACGTCCGAAGCCAATGGACTAGGTATTCAATAAGCTCTTCCTGCACTCGATTTCCTATCTTGTGCTCGTTTTACATGTTTCCTAAATCTAGCTTCATTGCAGCACCAAGATCTCAAGATAAGAAAGCGAAACAAAGGAGCAAGCCTATCTGAAAAACGCTACTATATGGCTCGGCTCGGGTACGTCCTAGATATACCCGAACGTGAAAAATGCACAGTTTGACTAGAGAAAAGAAGTAGAGAAGAGAATGAGAAATGGATTGCTGTGGTTTTTTGTTTCCTTGTTGGCTTTAGTTTTGGTGTTTTGGGGTTTTCTTTTGGGAGGCTTTATAGGCCATATGATTTAAGCCTGTAAAAGCTCTTACTATAGAGTGGTTACCATACAAAAGTGTATACTCTGGGTGGATGCTTTCTCATACTGTACATAAGGGAAAAACACTTTGATTGATATCTATGGAGCTTTGTTTGTTGCAATCTGCTGCTAAATGAGAAGTTTGTGGCTTTCAAGTTATTATTGTTGATAAGTTTGGGTTTGTTTTCGATAATGATATGTAATTGTTTACGATTGGTTGTGACAGGTGGTGTATACAAGGGCCTAGGTACATATTCACCACTGGCTGAGACGGGTGGTGTGTATAAGGATTTGGGTACATATTCACTACAACATGCTGATACGTGATTTCAATGATTCAAACTTTATATTCTTGAGTTGTAGAAAACAATTAGATCAGAGACAATCTCTCTGGATTCGCTCCACCTTACAACCTTTCTTTCCATTGTAATTGTCATTGTAGCATGCATCCGGCCCATAAAGGCCATACGTACTTGATGTCGATCTCCAACTTCCTCCCGTTTGAAAGACTATTCTGTATGGTTGGAGATGATGAAAACAAGAGAAAAAAGAGTCAATTCAATCCCAAGAGACTGTGCCAATATGATCTTTAATGAGGTGCGGGATTTTGCATCCCGAGACCCCATGTCCTCTCTTTCCTGACTGCAACCCAAGAAGTTGACTTTGCCAACACAACATTAGGGTCGTCCCTTTCATTCTATACTAACTAGGC

mRNA sequence

TGGTATGAGTGGTAGGCGCACCACCAGACATCCTGACCCCATCGCTTCTTCTCTCTGTGCTCTGTTTTTCATCCTTTCCTCTGTTTTTCAATACCTTCTTAATCCCCTCCCCTTCTTCCATTCTCTCTAACCTTCCCTTTCTAATTCTCTGTTTCTTCAATGGAATGTACTTTGGGCCTTTTCCGCACTTCTGGCGTTGGTGGGTCTGTTTCTGGGTCCGCCATTAACGACCCCAATGAGCCTAGAATGAAGATTTTTGAGAAAGATTTTGTGGGTAAGATTCCGATTGAGCCGTCTCCTTGTCCTGCCTCCTCTGGCCTTGAATTGGGCCTTGGTTTAGCCGTTGGCGGCTGCGGGAAGGTTAGCGGTGGTACTTGGGGTGAGCGTGGTCGGATTTTGACTGCTCGGGATTTCCCTGTTCTTGGTGGCTCTTCTGTTTCTTCTTGTTCTTCCTCTTCTTGTTTCCATGGAAGAGAGGGTAATGGTTCTGTTGCTGTTTCTGGGACTAAACGAGCTGCTGATTCTGCTCCTAATGATGGAGGATCCCCCACTGCTCTCAATCAGGTTGTGGGATGGCCACCCATTAGGACATACAGGATGAACAGCTTGGTGAACCAAGCAAAGACAGCCAGGGCTGAGGAAGATGAGCAGTCCAAGGACAACAAAGCATGTGATGTTGATGGAAAAGGGCACCTAGGATTTGTCAAAGTGAATGTCGATGGGGTTGTCATAGGGAGGAAAGTGGATATCAATGCCCATTCTTGCTATGAGACCTTGGCCCTTATGCTGGAGGACATGTTTTTCAAGTCCAATGGGAAAAGTGGAGACAAAGAACAAGGACAGAAACTGTCTAAGCTTTTGGATGGATCCTCTGAGTTTGTGCTTACATATGAAGATAGAGAGGGGGATTGGATGCTTGTTGGAGATGTCCCTTGGAGGATGTTTTTGAGCTCTGTTCGAAGGCTTCGTATAATGAGGACGTCCGAAGCCAATGGACTAGCACCAAGATCTCAAGATAAGAAAGCGAAACAAAGGAGCAAGCCTATCTGAAAAACGCTACTATATGGCTCGGCTCGGGTGGTGTATACAAGGGCCTAGGTACATATTCACCACTGGCTGAGACGGGTGGTGTGTATAAGGATTTGGGTACATATTCACTACAACATGCTGATACGTGATTTCAATGATTCAAACTTTATATTCTTGAGTTGTAGAAAACAATTAGATCAGAGACAATCTCTCTGGATTCGCTCCACCTTACAACCTTTCTTTCCATTGTAATTGTCATTGTAGCATGCATCCGGCCCATAAAGGCCATACGTACTTGATGTCGATCTCCAACTTCCTCCCGTTTGAAAGACTATTCTGTATGGTTGGAGATGATGAAAACAAGAGAAAAAAGAGTCAATTCAATCCCAAGAGACTGTGCCAATATGATCTTTAATGAGGTGCGGGATTTTGCATCCCGAGACCCCATGTCCTCTCTTTCCTGACTGCAACCCAAGAAGTTGACTTTGCCAACACAACATTAGGGTCGTCCCTTTCATTCTATACTAACTAGGC

Coding sequence (CDS)

ATGGAATGTACTTTGGGCCTTTTCCGCACTTCTGGCGTTGGTGGGTCTGTTTCTGGGTCCGCCATTAACGACCCCAATGAGCCTAGAATGAAGATTTTTGAGAAAGATTTTGTGGGTAAGATTCCGATTGAGCCGTCTCCTTGTCCTGCCTCCTCTGGCCTTGAATTGGGCCTTGGTTTAGCCGTTGGCGGCTGCGGGAAGGTTAGCGGTGGTACTTGGGGTGAGCGTGGTCGGATTTTGACTGCTCGGGATTTCCCTGTTCTTGGTGGCTCTTCTGTTTCTTCTTGTTCTTCCTCTTCTTGTTTCCATGGAAGAGAGGGTAATGGTTCTGTTGCTGTTTCTGGGACTAAACGAGCTGCTGATTCTGCTCCTAATGATGGAGGATCCCCCACTGCTCTCAATCAGGTTGTGGGATGGCCACCCATTAGGACATACAGGATGAACAGCTTGGTGAACCAAGCAAAGACAGCCAGGGCTGAGGAAGATGAGCAGTCCAAGGACAACAAAGCATGTGATGTTGATGGAAAAGGGCACCTAGGATTTGTCAAAGTGAATGTCGATGGGGTTGTCATAGGGAGGAAAGTGGATATCAATGCCCATTCTTGCTATGAGACCTTGGCCCTTATGCTGGAGGACATGTTTTTCAAGTCCAATGGGAAAAGTGGAGACAAAGAACAAGGACAGAAACTGTCTAAGCTTTTGGATGGATCCTCTGAGTTTGTGCTTACATATGAAGATAGAGAGGGGGATTGGATGCTTGTTGGAGATGTCCCTTGGAGGATGTTTTTGAGCTCTGTTCGAAGGCTTCGTATAATGAGGACGTCCGAAGCCAATGGACTAGCACCAAGATCTCAAGATAAGAAAGCGAAACAAAGGAGCAAGCCTATCTGA

Protein sequence

MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGLAVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAADSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHLGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI

Homology

[Close]

BLAST of CmaCh17G001320 vs. ExPASy Swiss-Prot
Match: Q38831 (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 246.9 bits (629), Expect = 2.9e-64
Identity = 142/262 (54.20%), Postives = 175/262 (66.79%), Query Frame = 0


Query: 52  SGLELGLGLAVGG-----CGKV-SGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGR 111
           S LELGLGL++GG      GK   GG WGERGR+LTA+DFP +                 
Sbjct: 12  SELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSV----------------- 71

Query: 112 EGNGSVAVSGTKRAADSAPNDGGS-PTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQ 171
                    G+KRAADSA + G S P + +QVVGWPPI ++RMNSLVN   T  A E+E+
Sbjct: 72  ---------GSKRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEE 131

Query: 172 SKDNKACD---------VDGKGHLGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFF 231
           +   K  D         V+GK  +GF+KVN+DGV IGRKVD+NAHS YE LA  LEDMFF
Sbjct: 132 AGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFF 191

Query: 232 KSN-GKSGDKEQGQKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRT 291
           ++N G  G   Q  K  +LLDGSSEFVLTYED+EGDWMLVGDVPWRMF++SV+RLR+M+T
Sbjct: 192 RTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKT 247

Query: 292 SEANGLAPRSQDKKAKQRSKPI 297
           SEANGLA R+Q+   +QR +P+
Sbjct: 252 SEANGLAARNQEPNERQRKQPV 247

[Close]

BLAST of CmaCh17G001320 vs. ExPASy Swiss-Prot
Match: Q38830 (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 7.3e-60
Identity = 139/270 (51.48%), Postives = 175/270 (64.81%), Query Frame = 0


Query: 38  VGKIPIEPSPCPASSGLELGLGLAVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCS 97
           V ++ +  S  PA S LELGLGL++G      GG W ERGRILTA+DFP +         
Sbjct: 4   VSELEVGKSNLPAESELELGLGLSLG------GGAWKERGRILTAKDFPSV--------- 63

Query: 98  SSSCFHGREGNGSVAVSGTKRAADSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQ--AK 157
                            G+KR+A+S+ + G SP   +QVVGWPPI  +RMNSLVN    K
Sbjct: 64  -----------------GSKRSAESSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMK 123

Query: 158 TARAEEDEQS----KDNKACDVDGKGH-----LGFVKVNVDGVVIGRKVDINAHSCYETL 217
            ARAEE +      K+++  DV  K +     LGFVKVN+DGV IGRKVD+ AHS YE L
Sbjct: 124 AARAEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENL 183

Query: 218 ALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWRMFLSSV 277
           A  LE+MFF   G +    +  K  +LLDGSS+FVLTYED+EGDWMLVGDVPWRMF++SV
Sbjct: 184 AQTLEEMFFGMTGTT--CREKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSV 239

Query: 278 RRLRIMRTSEANGLAPRSQDKKAKQRSKPI 297
           +RLRIM TSEA+GLAPR Q++K +QR+ P+
Sbjct: 244 KRLRIMGTSEASGLAPRRQEQKDRQRNNPV 239

[Close]

BLAST of CmaCh17G001320 vs. ExPASy Swiss-Prot
Match: Q38829 (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.9e-44
Identity = 124/276 (44.93%), Postives = 150/276 (54.35%), Query Frame = 0


Query: 14  GGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGLAVGGCGKVSGGTW 73
           GGS SGSA    N+  +          +  E S  P  + LELGL L++G  G       
Sbjct: 3   GGSASGSASALSNDENL---------VVSCEDSSSPIGNELELGLTLSLGRKG------- 62

Query: 74  GERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAADSAPNDGGSPTAL 133
                    RD  V    S SS SSSS       + +  ++G KR ADS     G     
Sbjct: 63  --------YRDCRVYADDSSSSSSSSSL------SRASVIAGIKRTADSMAATSG----- 122

Query: 134 NQVVGWPPIRTYRMNSLVNQAKTARAE----EDEQSKDNKACDVDGKGHLGFVKVNVDGV 193
            QVVGWPPIRTYRMNS+VNQAK +  E    E  Q+ +    D     +  FVKV +DG+
Sbjct: 123 -QVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGI 182

Query: 194 VIGRKVDINAHSCYETLALMLEDMFFK----SNGKSGDKEQGQKLSKLLDGSSEFVLTYE 253
            IGRK+D+NAH CYE+L+  LE+MF K    S     D      +  L DGSS  VLTYE
Sbjct: 183 PIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYE 242

Query: 254 DREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLA 282
           D+EGDWMLVGDVPW MF+ SVRRLRIM+TSEA G A
Sbjct: 243 DKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242

[Close]

BLAST of CmaCh17G001320 vs. ExPASy Swiss-Prot
Match: Q0DWF2 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 4.8e-43
Identity = 131/286 (45.80%), Postives = 156/286 (54.55%), Query Frame = 0


Query: 15  GSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGLAVGGCGKVSGGTWG 74
           G V+G    +P     +  E        +E S       LELGL L      K       
Sbjct: 3   GGVAGPTAGEPPGTEAEAEE--------VEESSAGDDEELELGLSLG----SKKQQQQQH 62

Query: 75  ERGRILTARDF-PVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRA----ADSAPND--G 134
              RILTARD  P    S  SS SSSS         + A +G KRA    A ++P     
Sbjct: 63  APCRILTARDLQPAAALSPDSSVSSSS-------PAAAAAAGGKRAEGPTATTSPGTVAS 122

Query: 135 GSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDV-------DGKGHL- 194
           G P +   VVGWPPIR +RMNSL NQAK   +E D +       DV       + KG + 
Sbjct: 123 GHPHSSFGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVA 182

Query: 195 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSE 254
           G+VKVN+DG VIGRKVD+NAH  Y+TLAL LE MF K +           L KLLD S+E
Sbjct: 183 GWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSL-KLLDNSAE 242

Query: 255 FVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQ 286
           + LTYEDR+GDWMLVGDVPW MF+SSV+RLRIMRTS+ANGL  R Q
Sbjct: 243 YQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQRYQ 268

[Close]

BLAST of CmaCh17G001320 vs. ExPASy Swiss-Prot
Match: A2XB18 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-42
Identity = 124/246 (50.41%), Postives = 147/246 (59.76%), Query Frame = 0


Query: 55  ELGLGLAVGGCGKVSGGTWGERGRILTARDF-PVLGGSSVSSCSSSSCFHGREGNGSVAV 114
           EL LGL++G   K          RILTARD  P    S  SS SSSS         + A 
Sbjct: 33  ELELGLSLG--SKKQQQQQHAPCRILTARDLQPAAALSPDSSVSSSS-------PAAAAA 92

Query: 115 SGTKRA----ADSAPND--GGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKD 174
           +G KRA    A ++P     G P +   VVGWPPIR +RMNSL NQAK   +E D +   
Sbjct: 93  AGGKRAEGPTATTSPGTVASGHPHSSFGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTA 152

Query: 175 NKACDV-------DGKGHL-GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNG 234
               DV       + KG + G+VKVN+DG VIGRKVD+NAH  Y+TLAL LE MF K + 
Sbjct: 153 TNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSI 212

Query: 235 KSGDKEQGQKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANG 286
                     L KLLD S+E+ LTYEDR+GDWMLVGDVPW MF+SSV+RLRIMRTS+ANG
Sbjct: 213 GLCASHNTNSL-KLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANG 268

[Close]

BLAST of CmaCh17G001320 vs. ExPASy TrEMBL
Match: A0A6J1L3Y4 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498932 PE=3 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.0e-165
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120

Query: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHLG 180
           DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHLG
Sbjct: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHLG 180

Query: 181 FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEF 240
           FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEF
Sbjct: 181 FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEF 240

Query: 241 VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 297
           VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI
Sbjct: 241 VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 296

[Close]

BLAST of CmaCh17G001320 vs. ExPASy TrEMBL
Match: A0A6J1KUY3 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498932 PE=3 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 7.3e-164
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120

Query: 121 DSAPNDGGSPTALN-QVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHL 180
           DSAPNDGGSPTALN QVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHL
Sbjct: 121 DSAPNDGGSPTALNSQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHL 180

Query: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSE 240
           GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSE
Sbjct: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSE 240

Query: 241 FVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 297
           FVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI
Sbjct: 241 FVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 297

[Close]

BLAST of CmaCh17G001320 vs. ExPASy TrEMBL
Match: A0A6J1H4Z9 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460198 PE=3 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 4.0e-162
Identity = 291/296 (98.31%), Postives = 293/296 (98.99%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNE RM+IFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE NGSVAVSGTKRAA
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRESNGSVAVSGTKRAA 120

Query: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHLG 180
           DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNK CDVDGKGHLG
Sbjct: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKTCDVDGKGHLG 180

Query: 181 FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEF 240
           FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKS+GKSGDKEQGQKLSKLLDGSSEF
Sbjct: 181 FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSEF 240

Query: 241 VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 297
           VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI
Sbjct: 241 VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 296

[Close]

BLAST of CmaCh17G001320 vs. ExPASy TrEMBL
Match: A0A6J1H3M4 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460198 PE=3 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 9.9e-161
Identity = 291/297 (97.98%), Postives = 293/297 (98.65%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNE RM+IFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE NGSVAVSGTKRAA
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRESNGSVAVSGTKRAA 120

Query: 121 DSAPNDGGSPTALN-QVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHL 180
           DSAPNDGGSPTALN QVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNK CDVDGKGHL
Sbjct: 121 DSAPNDGGSPTALNSQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKTCDVDGKGHL 180

Query: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSE 240
           GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKS+GKSGDKEQGQKLSKLLDGSSE
Sbjct: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSE 240

Query: 241 FVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 297
           FVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI
Sbjct: 241 FVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 297

[Close]

BLAST of CmaCh17G001320 vs. ExPASy TrEMBL
Match: A0A1S3CCK6 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103499461 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 7.4e-124
Identity = 250/320 (78.12%), Postives = 264/320 (82.50%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           ME TLGLFR S + GSVSGSAIND N   M I +KDFVG +PI  S  PASS LELGLGL
Sbjct: 1   MESTLGLFRPSPLCGSVSGSAINDSNASTMDILQKDFVGNVPIHSSTSPASSDLELGLGL 60

Query: 61  AV-GGCGKVSGGTWGERGRILTARDFPVLGGS------SVSSCSSSSCFHGREGNGSVAV 120
           A+ GG GKV+G TWGERGRILTA+DFPV  GS      S SS SSSS FHGRE   SV+V
Sbjct: 61  ALGGGGGKVTGATWGERGRILTAQDFPVHCGSSSTSSTSSSSSSSSSRFHGREVTCSVSV 120

Query: 121 SGTKRAADSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEED--------EQS 180
           SGTKRAADSAPN+GGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEE+        +QS
Sbjct: 121 SGTKRAADSAPNEGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEEDAGCEEKKDQS 180

Query: 181 KD---NKACDVDGKGHLGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKS----- 240
           KD   NK CDVDGKGHLGFVKVNVDGVVIGRKVD+NAHSCYETLALMLEDMFF+S     
Sbjct: 181 KDTLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSCYETLALMLEDMFFRSAGASI 240

Query: 241 -NGKSGDKEQGQKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSE 297
            NGKSGDKEQ +K SKLLDGSSEFVLTYEDREGDWMLVGDVPW MF+SSVRRLRIMRTSE
Sbjct: 241 PNGKSGDKEQAKKQSKLLDGSSEFVLTYEDREGDWMLVGDVPWGMFVSSVRRLRIMRTSE 300

[Close]

BLAST of CmaCh17G001320 vs. NCBI nr
Match: XP_023006083.1 (auxin-responsive protein IAA13-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 590.9 bits (1522), Expect = 6.2e-165
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120

Query: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHLG 180
           DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHLG
Sbjct: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHLG 180

Query: 181 FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEF 240
           FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEF
Sbjct: 181 FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEF 240

Query: 241 VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 297
           VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI
Sbjct: 241 VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 296

[Close]

BLAST of CmaCh17G001320 vs. NCBI nr
Match: XP_023006082.1 (auxin-responsive protein IAA13-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 586.3 bits (1510), Expect = 1.5e-163
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120

Query: 121 DSAPNDGGSPTALN-QVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHL 180
           DSAPNDGGSPTALN QVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHL
Sbjct: 121 DSAPNDGGSPTALNSQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHL 180

Query: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSE 240
           GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSE
Sbjct: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSE 240

Query: 241 FVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 297
           FVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI
Sbjct: 241 FVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 297

[Close]

BLAST of CmaCh17G001320 vs. NCBI nr
Match: KAG6574888.1 (Auxin-responsive protein IAA13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 582.8 bits (1501), Expect = 1.7e-162
Identity = 292/296 (98.65%), Postives = 294/296 (99.32%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNE RM+IFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120

Query: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHLG 180
           DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNK CDVDGKGHLG
Sbjct: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKTCDVDGKGHLG 180

Query: 181 FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEF 240
           FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKS+GKSGDKEQGQKLSKLLDGSSEF
Sbjct: 181 FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSEF 240

Query: 241 VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 297
           VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI
Sbjct: 241 VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 296

[Close]

BLAST of CmaCh17G001320 vs. NCBI nr
Match: XP_022959103.1 (auxin-responsive protein IAA13-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 580.5 bits (1495), Expect = 8.3e-162
Identity = 291/296 (98.31%), Postives = 293/296 (98.99%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNE RM+IFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE NGSVAVSGTKRAA
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRESNGSVAVSGTKRAA 120

Query: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHLG 180
           DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNK CDVDGKGHLG
Sbjct: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKTCDVDGKGHLG 180

Query: 181 FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEF 240
           FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKS+GKSGDKEQGQKLSKLLDGSSEF
Sbjct: 181 FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSEF 240

Query: 241 VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 297
           VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI
Sbjct: 241 VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 296

[Close]

BLAST of CmaCh17G001320 vs. NCBI nr
Match: XP_023548751.1 (auxin-responsive protein IAA13-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 578.2 bits (1489), Expect = 4.1e-161
Identity = 290/296 (97.97%), Postives = 292/296 (98.65%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNE RM+I E+DFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEICERDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120

Query: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKACDVDGKGHLG 180
           DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNK CDVDGKGHLG
Sbjct: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKTCDVDGKGHLG 180

Query: 181 FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEF 240
           FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEF
Sbjct: 181 FVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEF 240

Query: 241 VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 297
           VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEA GLAPRSQDKKAKQRSKPI
Sbjct: 241 VLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEAKGLAPRSQDKKAKQRSKPI 296

[Close]

BLAST of CmaCh17G001320 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-66
Identity = 142/261 (54.41%), Postives = 174/261 (66.67%), Query Frame = 0


Query: 52  SGLELGLGLAVGG-----CGKV-SGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGR 111
           S LELGLGL++GG      GK   GG WGERGR+LTA+DFP +                 
Sbjct: 12  SELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSV----------------- 71

Query: 112 EGNGSVAVSGTKRAADSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQS 171
                    G+KRAADSA + G SP   +QVVGWPPI ++RMNSLVN   T  A E+E++
Sbjct: 72  ---------GSKRAADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEA 131

Query: 172 KDNKACD---------VDGKGHLGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFK 231
              K  D         V+GK  +GF+KVN+DGV IGRKVD+NAHS YE LA  LEDMFF+
Sbjct: 132 GKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFR 191

Query: 232 SN-GKSGDKEQGQKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTS 291
           +N G  G   Q  K  +LLDGSSEFVLTYED+EGDWMLVGDVPWRMF++SV+RLR+M+TS
Sbjct: 192 TNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTS 246

Query: 292 EANGLAPRSQDKKAKQRSKPI 297
           EANGLA R+Q+   +QR +P+
Sbjct: 252 EANGLAARNQEPNERQRKQPV 246

[Close]

BLAST of CmaCh17G001320 vs. TAIR 10
Match: AT2G33310.3 (auxin-induced protein 13 )

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-66
Identity = 142/261 (54.41%), Postives = 174/261 (66.67%), Query Frame = 0


Query: 52  SGLELGLGLAVGG-----CGKV-SGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGR 111
           S LELGLGL++GG      GK   GG WGERGR+LTA+DFP +                 
Sbjct: 12  SELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSV----------------- 71

Query: 112 EGNGSVAVSGTKRAADSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQS 171
                    G+KRAADSA + G SP   +QVVGWPPI ++RMNSLVN   T  A E+E++
Sbjct: 72  ---------GSKRAADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEA 131

Query: 172 KDNKACD---------VDGKGHLGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFK 231
              K  D         V+GK  +GF+KVN+DGV IGRKVD+NAHS YE LA  LEDMFF+
Sbjct: 132 GKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFR 191

Query: 232 SN-GKSGDKEQGQKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTS 291
           +N G  G   Q  K  +LLDGSSEFVLTYED+EGDWMLVGDVPWRMF++SV+RLR+M+TS
Sbjct: 192 TNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTS 246

Query: 292 EANGLAPRSQDKKAKQRSKPI 297
           EANGLA R+Q+   +QR +P+
Sbjct: 252 EANGLAARNQEPNERQRKQPV 246

[Close]

BLAST of CmaCh17G001320 vs. TAIR 10
Match: AT2G33310.2 (auxin-induced protein 13 )

HSP 1 Score: 246.9 bits (629), Expect = 2.0e-65
Identity = 142/262 (54.20%), Postives = 175/262 (66.79%), Query Frame = 0


Query: 52  SGLELGLGLAVGG-----CGKV-SGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGR 111
           S LELGLGL++GG      GK   GG WGERGR+LTA+DFP +                 
Sbjct: 12  SELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSV----------------- 71

Query: 112 EGNGSVAVSGTKRAADSAPNDGGS-PTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQ 171
                    G+KRAADSA + G S P + +QVVGWPPI ++RMNSLVN   T  A E+E+
Sbjct: 72  ---------GSKRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEE 131

Query: 172 SKDNKACD---------VDGKGHLGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFF 231
           +   K  D         V+GK  +GF+KVN+DGV IGRKVD+NAHS YE LA  LEDMFF
Sbjct: 132 AGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFF 191

Query: 232 KSN-GKSGDKEQGQKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRT 291
           ++N G  G   Q  K  +LLDGSSEFVLTYED+EGDWMLVGDVPWRMF++SV+RLR+M+T
Sbjct: 192 RTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKT 247

Query: 292 SEANGLAPRSQDKKAKQRSKPI 297
           SEANGLA R+Q+   +QR +P+
Sbjct: 252 SEANGLAARNQEPNERQRKQPV 247

[Close]

BLAST of CmaCh17G001320 vs. TAIR 10
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 232.3 bits (591), Expect = 5.2e-61
Identity = 139/270 (51.48%), Postives = 175/270 (64.81%), Query Frame = 0


Query: 38  VGKIPIEPSPCPASSGLELGLGLAVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCS 97
           V ++ +  S  PA S LELGLGL++G      GG W ERGRILTA+DFP +         
Sbjct: 4   VSELEVGKSNLPAESELELGLGLSLG------GGAWKERGRILTAKDFPSV--------- 63

Query: 98  SSSCFHGREGNGSVAVSGTKRAADSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQ--AK 157
                            G+KR+A+S+ + G SP   +QVVGWPPI  +RMNSLVN    K
Sbjct: 64  -----------------GSKRSAESSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMK 123

Query: 158 TARAEEDEQS----KDNKACDVDGKGH-----LGFVKVNVDGVVIGRKVDINAHSCYETL 217
            ARAEE +      K+++  DV  K +     LGFVKVN+DGV IGRKVD+ AHS YE L
Sbjct: 124 AARAEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENL 183

Query: 218 ALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWRMFLSSV 277
           A  LE+MFF   G +    +  K  +LLDGSS+FVLTYED+EGDWMLVGDVPWRMF++SV
Sbjct: 184 AQTLEEMFFGMTGTT--CREKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSV 239

Query: 278 RRLRIMRTSEANGLAPRSQDKKAKQRSKPI 297
           +RLRIM TSEA+GLAPR Q++K +QR+ P+
Sbjct: 244 KRLRIMGTSEASGLAPRRQEQKDRQRNNPV 239

[Close]

BLAST of CmaCh17G001320 vs. TAIR 10
Match: AT4G28640.1 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-45
Identity = 124/276 (44.93%), Postives = 150/276 (54.35%), Query Frame = 0


Query: 14  GGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGLAVGGCGKVSGGTW 73
           GGS SGSA    N+  +          +  E S  P  + LELGL L++G  G       
Sbjct: 3   GGSASGSASALSNDENL---------VVSCEDSSSPIGNELELGLTLSLGRKG------- 62

Query: 74  GERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAADSAPNDGGSPTAL 133
                    RD  V    S SS SSSS       + +  ++G KR ADS     G     
Sbjct: 63  --------YRDCRVYADDSSSSSSSSSL------SRASVIAGIKRTADSMAATSG----- 122

Query: 134 NQVVGWPPIRTYRMNSLVNQAKTARAE----EDEQSKDNKACDVDGKGHLGFVKVNVDGV 193
            QVVGWPPIRTYRMNS+VNQAK +  E    E  Q+ +    D     +  FVKV +DG+
Sbjct: 123 -QVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGI 182

Query: 194 VIGRKVDINAHSCYETLALMLEDMFFK----SNGKSGDKEQGQKLSKLLDGSSEFVLTYE 253
            IGRK+D+NAH CYE+L+  LE+MF K    S     D      +  L DGSS  VLTYE
Sbjct: 183 PIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYE 242

Query: 254 DREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLA 282
           D+EGDWMLVGDVPW MF+ SVRRLRIM+TSEA G A
Sbjct: 243 DKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242

The following BLAST results are available for this feature:

BLAST of CmaCh17G001320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38831	2.9e-64	54.20	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=...	[more]
Q38830	7.3e-60	51.48	Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=...	[more]
Q38829	1.9e-44	44.93	Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=...	[more]
Q0DWF2	4.8e-43	45.80	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10...	[more]
A2XB18	1.1e-42	50.41	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 P...	[more]

BLAST of CmaCh17G001320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L3Y4	3.0e-165	100.00	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498932 PE=3 SV=1	[more]
A0A6J1KUY3	7.3e-164	99.66	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498932 PE=3 SV=1	[more]
A0A6J1H4Z9	4.0e-162	98.31	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460198 PE=3 SV=1	[more]
A0A6J1H3M4	9.9e-161	97.98	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460198 PE=3 SV=1	[more]
A0A1S3CCK6	7.4e-124	78.13	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103499461 PE=3 SV=1	[more]

BLAST of CmaCh17G001320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006083.1	6.2e-165	100.00	auxin-responsive protein IAA13-like isoform X2 [Cucurbita maxima]	[more]
XP_023006082.1	1.5e-163	99.66	auxin-responsive protein IAA13-like isoform X1 [Cucurbita maxima]	[more]
KAG6574888.1	1.7e-162	98.65	Auxin-responsive protein IAA13, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022959103.1	8.3e-162	98.31	auxin-responsive protein IAA13-like isoform X2 [Cucurbita moschata]	[more]
XP_023548751.1	4.1e-161	97.97	auxin-responsive protein IAA13-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh17G001320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33310.1	1.4e-66	54.41	auxin-induced protein 13	[more]
AT2G33310.3	1.4e-66	54.41	auxin-induced protein 13	[more]
AT2G33310.2	2.0e-65	54.20	auxin-induced protein 13	[more]
AT1G04550.2	5.2e-61	51.48	AUX/IAA transcriptional regulator family protein	[more]
AT4G28640.1	1.4e-45	44.93	indole-3-acetic acid inducible 11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 117..283 e-value: 6.7E-61 score: 206.2
None	No IPR available	GENE3D	3.10.20.90		coord: 175..286 e-value: 1.8E-37 score: 129.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..135
None	No IPR available	PANTHER	PTHR31734:SF187	AUXIN-RESPONSIVE PROTEIN	coord: 24..287
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 181..272
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 24..287
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 179..276 score: 25.301107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G001320.1	CmaCh17G001320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding