CmaCh17G001010 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAGGGTAATTTCTATTCAGACCAAAATTTCCCCCAATTTCTTAAATTTTAATTGCATCTCATCTGAACGTCTCACTTTCTTCCTTCTTCTTCTCTCCCTTCAATTCTGAGAATCCGAAACCTTATTGTTCTGTAAGAACGAAATAGGAAAAAGGTATTCCAATGGTTTCTTGAGGCCTTTTTAGTAGCTGCGGGCAGGAAGGACGATGACGCCGAGCCGTCGTAACTTCTTGAACTCCAAGATCCTCCTTTCTTTTCAACTCGTTCATGGAACGCGGCAAACCCCTTTCTTCTTCTTCAGAATCCAGCAGATCATCGGATCCGGAAAATGCGAAGGTTATTGAATGGGAGGACTTCGAGCAGGAGCTTGCCAGGCTATGGAGTCTCTCTTCGGCGCTCGAGGAAGCCAAGCAACACAAAGAATCTCTCAAGCAAAAGCTCGACTCCCTAATTCAGGTTTCCTTTTCGCCTTATAGATTGCTTCCGTTGATTCGAAATTTGCGGCCTAGTACTTTTTTATTTTTTATTTTCTATCTTCTGATTAGGAATTTTGGCCGCCTGCATTTTTCGTGTCCTGTGTGAATTGGGTATTGGAAACTGGATCTATGAGCTTTTTAGTGATGTTGGAGAATTGCTCCGTTTGGTCTTTGTGGCAAAGGAATTTATGTATGCTAGACGAGGCTGAGGGTTTTAGACCTTTTGTTCTTATTTTCATTTAGGGCTCCCTGGCATTTGTCCTAAAATTTACAAGTTGAGTGCTTCGATGAGGTCGAATTTCTAGTCATTTACATTCTTGTAAATTTCTAGTCATTTACAAGTTGAATTAGAAGGCTAATTAGTGAAATTTCATTAAGAGAACAGTAAAATAGATCGCTGTTGGTTTTCTTGATTTGGTATTGGTGCTTTCCCTTTTTGGGGGGATTGAAAGGTTCTGATAAGTCTATGGACTTTTGGTTGTTATTCGCTGGGCAGGTTGATTCCGAGTCAGTTCGTCGATCAAATGAGCTTGCAGAAATGCGCGAAAAGCTTGAAGCAAGGAAATGTATTGTGGATAATATGGGCATGCGTTCTAAAATTGCATCAGAGGATGTTAAGAAGCAAGAGGAGAGTCTTAGCATTGAAGTTAGATCACTTTTGGTTGCTGGGACTGCTTTATCTAAAGCTAGGAAGCGATTGGAGGTAATTATCTACAGTATGATTATAACTAGAAGCCATATCAGAATTTTCGTTAATATTTCGCAAGATGTATGTTCGGCTCATCGGTAATCATATTACGAAGCTAGTAGAGGTGGAAATACCAATGATACATGTGCACACACACGTTAACAATACTTTGTAGAGAGGCCTAACTTGTTAATAACTAAAGAAAAGGATGACGACTCCGACAGAAAGTCTCGGAGATGCAATTTTAACATATATTATCCCACAGCGATTTTATCTTCTTTAAATGGCGAGTTGCATAAGATTTGGAGTTCTTGTAGTATTCTTCTGCTATTTAGGATGATTCGAAATCCAAGCTATATTAGGTACTCTACTAACTAGCTAGGCAATCGGCATGCTGTTACGATTCCCTATCTTTGACAGGAATCAAATAAGTTACTCTCTGGGGAAGAAGGCTATGATCGTCTTAAATGCTTACAGAAGATGCTGAGAAGAAGACAGCAACATATGATTTCACAAGTTTCATTTCTCTATCCTGTAAAGATCTCGACTAGTCCTGCTAAAGATCAGGAGCTCGAATCATTTCCCAACACTACTAGATTAGGTATGTGCTTGTAAGTTCGAGACAGTCGATAACTCTTGATATATGAGACTTAGTTTACTCCAGGTATTGCAAGATTGTTGGGGGAACTGTTTTTAAAAAACTTCAATATTTTGACCACTTTTTGAAGTGCTGCTAAAGTGATAAGAACTCACTAAAATATATTCACTTTGATACTACTATTTATGATACAAAACCTATCGATCTTCGACCAGCATCGAGAAAATATCAATTCTGTTAAGTTTTTGTAAATGGGATGATGCCAGACTATTGTAAGTTTTCTGTCATAATCTGTTAATACTATTGTTCTTGTCCAGACTATTGTAAGTTTTTGTATTGTTTTCATTCTTCCAGGGAATTCTTCTGGATCTAAACCTGTCAATCATGGATCCTTGACAATATTAGGTCTAAATTTGAATGTGCTTTCATTTAAAAAAATGGGCTTTTTCAGCGATAAGAAAGAGACTCAGAGGTCTGCATCTGCCCTGGGATTTGTAGCTCATGTATGTTCTCCCTCATTTTGACCTCTTTTTGAAGTTGCTTAATGTTGGATAGACTTTTTTTCTTATCTTGTTTGCAGGTGATATTGAATGTGTTTTGTCTGGATTGTTGTGTTAGTGATATATTATGATTTGGTTATGGTTAACCTGTTATGCTTTATGCTGGTTTAACAGTCAATTATTGTATTTTTTGCAGGCTGTTTCCCTCATATCTTCATATCTAAAAGTTCCTTTACGCTACCCTTTACGCTTGAGTGGTTCTCGTTCGTACATTTGTGATTATGCCCCTTCAATAGAACCCACATCATCTGTTTCCTTATCTACCACACTACCTGCCACAAATACGAAGCATGTCGAGTTCCCTCTGTTTTTAGATGGACAAGATACAACGAGAGCTGCTTACGCTGTATTTTTGTTAAACAAGGTATAGTTTCATTTCCTTCATTCCTCGTCTGGATTTTGTGATTCACCAGTTTCCAAGATAAGTAGTTGGTTTTTCGTGCTAAATAAGTAGTTAATAGTTTTTGTGTGAAGTGATCAGCTCAAACTCATTTCACTTTGATGTCGACCTTCTACCATTACTTATTGCATCTGTTAACAAGCCACAATGTGTTGGTCTTTGGAGCTCTACTTGTGTCATAGTTTTCCCCTGTTATCTGTGGCAGGACTTGGAGCAGCTTCTGAACTTTATTGGTGTGAAGAGTTTGGGTCCACGCCATATATTGGCCAACTTGAAGGAGCTTCTGAGGATCATCCAATCTGCAGATTATATTGATAAGTGATCAACATTTTCATATGAAGGTTAGGTTTGTAGGTTGAACAACATTGTAAATGGATCAGTTGCATATTCTTATACAGGTGCGAATTCACCTTTTTCATATCATTATATACATTGTTAGTTATTGCTGATACCAATGTCCAAAGGGAAGTGTCTGGTTTAGTTTGTCGTACCAGCATCCGATGTACCGATGTACCGAAGAAAAATGAAATCGAAATGCAGAAGAAAGATTTGAAAATGAACATACTGCAATGATCA AAAAAAGGGTAATTTCTATTCAGACCAAAATTTCCCCCAATTTCTTAAATTTTAATTGCATCTCATCTGAACGTCTCACTTTCTTCCTTCTTCTTCTCTCCCTTCAATTCTGAGAATCCGAAACCTTATTGTTCTGTAAGAACGAAATAGGAAAAAGGTATTCCAATGGTTTCTTGAGGCCTTTTTAGTAGCTGCGGGCAGGAAGGACGATGACGCCGAGCCGTCGTAACTTCTTGAACTCCAAGATCCTCCTTTCTTTTCAACTCGTTCATGGAACGCGGCAAACCCCTTTCTTCTTCTTCAGAATCCAGCAGATCATCGGATCCGGAAAATGCGAAGGTTATTGAATGGGAGGACTTCGAGCAGGAGCTTGCCAGGCTATGGAGTCTCTCTTCGGCGCTCGAGGAAGCCAAGCAACACAAAGAATCTCTCAAGCAAAAGCTCGACTCCCTAATTCAGGTTGATTCCGAGTCAGTTCGTCGATCAAATGAGCTTGCAGAAATGCGCGAAAAGCTTGAAGCAAGGAAATGTATTGTGGATAATATGGGCATGCGTTCTAAAATTGCATCAGAGGATGTTAAGAAGCAAGAGGAGAGTCTTAGCATTGAAGTTAGATCACTTTTGGTTGCTGGGACTGCTTTATCTAAAGCTAGGAAGCGATTGGAGGAATCAAATAAGTTACTCTCTGGGGAAGAAGGCTATGATCGTCTTAAATGCTTACAGAAGATGCTGAGAAGAAGACAGCAACATATGATTTCACAAGTTTCATTTCTCTATCCTGTAAAGATCTCGACTAGTCCTGCTAAAGATCAGGAGCTCGAATCATTTCCCAACACTACTAGATTAGGGAATTCTTCTGGATCTAAACCTGTCAATCATGGATCCTTGACAATATTAGGTCTAAATTTGAATGTGCTTTCATTTAAAAAAATGGGCTTTTTCAGCGATAAGAAAGAGACTCAGAGGTCTGCATCTGCCCTGGGATTTGTAGCTCATGCTGTTTCCCTCATATCTTCATATCTAAAAGTTCCTTTACGCTACCCTTTACGCTTGAGTGGTTCTCGTTCGTACATTTGTGATTATGCCCCTTCAATAGAACCCACATCATCTGTTTCCTTATCTACCACACTACCTGCCACAAATACGAAGCATGTCGAGTTCCCTCTGTTTTTAGATGGACAAGATACAACGAGAGCTGCTTACGCTGTATTTTTGTTAAACAAGGACTTGGAGCAGCTTCTGAACTTTATTGGTGTGAAGAGTTTGGGTCCACGCCATATATTGGCCAACTTGAAGGAGCTTCTGAGGATCATCCAATCTGCAGATTATATTGATAAGTGATCAACATTTTCATATGAAGGTTAGGTTTGTAGGTTGAACAACATTGTAAATGGATCAGTTGCATATTCTTATACAGGTGCGAATTCACCTTTTTCATATCATTATATACATTGTTAGTTATTGCTGATACCAATGTCCAAAGGGAAGTGTCTGGTTTAGTTTGTCGTACCAGCATCCGATGTACCGATGTACCGAAGAAAAATGAAATCGAAATGCAGAAGAAAGATTTGAAAATGAACATACTGCAATGATCA ATGGAACGCGGCAAACCCCTTTCTTCTTCTTCAGAATCCAGCAGATCATCGGATCCGGAAAATGCGAAGGTTATTGAATGGGAGGACTTCGAGCAGGAGCTTGCCAGGCTATGGAGTCTCTCTTCGGCGCTCGAGGAAGCCAAGCAACACAAAGAATCTCTCAAGCAAAAGCTCGACTCCCTAATTCAGGTTGATTCCGAGTCAGTTCGTCGATCAAATGAGCTTGCAGAAATGCGCGAAAAGCTTGAAGCAAGGAAATGTATTGTGGATAATATGGGCATGCGTTCTAAAATTGCATCAGAGGATGTTAAGAAGCAAGAGGAGAGTCTTAGCATTGAAGTTAGATCACTTTTGGTTGCTGGGACTGCTTTATCTAAAGCTAGGAAGCGATTGGAGGAATCAAATAAGTTACTCTCTGGGGAAGAAGGCTATGATCGTCTTAAATGCTTACAGAAGATGCTGAGAAGAAGACAGCAACATATGATTTCACAAGTTTCATTTCTCTATCCTGTAAAGATCTCGACTAGTCCTGCTAAAGATCAGGAGCTCGAATCATTTCCCAACACTACTAGATTAGGGAATTCTTCTGGATCTAAACCTGTCAATCATGGATCCTTGACAATATTAGGTCTAAATTTGAATGTGCTTTCATTTAAAAAAATGGGCTTTTTCAGCGATAAGAAAGAGACTCAGAGGTCTGCATCTGCCCTGGGATTTGTAGCTCATGCTGTTTCCCTCATATCTTCATATCTAAAAGTTCCTTTACGCTACCCTTTACGCTTGAGTGGTTCTCGTTCGTACATTTGTGATTATGCCCCTTCAATAGAACCCACATCATCTGTTTCCTTATCTACCACACTACCTGCCACAAATACGAAGCATGTCGAGTTCCCTCTGTTTTTAGATGGACAAGATACAACGAGAGCTGCTTACGCTGTATTTTTGTTAAACAAGGACTTGGAGCAGCTTCTGAACTTTATTGGTGTGAAGAGTTTGGGTCCACGCCATATATTGGCCAACTTGAAGGAGCTTCTGAGGATCATCCAATCTGCAGATTATATTGATAAGTGA MERGKPLSSSSESSRSSDPENAKVIEWEDFEQELARLWSLSSALEEAKQHKESLKQKLDSLIQVDSESVRRSNELAEMREKLEARKCIVDNMGMRSKIASEDVKKQEESLSIEVRSLLVAGTALSKARKRLEESNKLLSGEEGYDRLKCLQKMLRRRQQHMISQVSFLYPVKISTSPAKDQELESFPNTTRLGNSSGSKPVNHGSLTILGLNLNVLSFKKMGFFSDKKETQRSASALGFVAHAVSLISSYLKVPLRYPLRLSGSRSYICDYAPSIEPTSSVSLSTTLPATNTKHVEFPLFLDGQDTTRAAYAVFLLNKDLEQLLNFIGVKSLGPRHILANLKELLRIIQSADYIDK Homology
BLAST of CmaCh17G001010 vs. ExPASy Swiss-Prot
Match: Q9P2Y5 (UV radiation resistance-associated gene protein OS=Homo sapiens OX=9606 GN=UVRAG PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 2.2e-10 Identity = 82/324 (25.31%), Postives = 144/324 (44.44%), Query Frame = 0
BLAST of CmaCh17G001010 vs. ExPASy Swiss-Prot
Match: Q8K245 (UV radiation resistance-associated protein OS=Mus musculus OX=10090 GN=Uvrag PE=1 SV=2) HSP 1 Score: 67.4 bits (163), Expect = 3.7e-10 Identity = 80/323 (24.77%), Postives = 140/323 (43.34%), Query Frame = 0
BLAST of CmaCh17G001010 vs. ExPASy Swiss-Prot
Match: O60149 (Vacuolar protein sorting-associated protein 38 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vps38 PE=3 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 1.0e-07 Identity = 73/307 (23.78%), Postives = 123/307 (40.07%), Query Frame = 0
BLAST of CmaCh17G001010 vs. ExPASy TrEMBL
Match: A0A6J1KZX0 (UV radiation resistance-associated gene protein OS=Cucurbita maxima OX=3661 GN=LOC111499115 PE=4 SV=1) HSP 1 Score: 667.9 bits (1722), Expect = 2.3e-188 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0
BLAST of CmaCh17G001010 vs. ExPASy TrEMBL
Match: A0A6J1H683 (UV radiation resistance-associated gene protein OS=Cucurbita moschata OX=3662 GN=LOC111460405 PE=4 SV=1) HSP 1 Score: 663.3 bits (1710), Expect = 5.7e-187 Identity = 353/356 (99.16%), Postives = 355/356 (99.72%), Query Frame = 0
BLAST of CmaCh17G001010 vs. ExPASy TrEMBL
Match: A0A0A0LKB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G139810 PE=4 SV=1) HSP 1 Score: 606.7 bits (1563), Expect = 6.3e-170 Identity = 323/359 (89.97%), Postives = 339/359 (94.43%), Query Frame = 0
BLAST of CmaCh17G001010 vs. ExPASy TrEMBL
Match: A0A5D3DD46 (UV radiation resistance-associated gene protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G001010 PE=4 SV=1) HSP 1 Score: 605.9 bits (1561), Expect = 1.1e-169 Identity = 324/361 (89.75%), Postives = 338/361 (93.63%), Query Frame = 0
BLAST of CmaCh17G001010 vs. ExPASy TrEMBL
Match: A0A1S3C5Q3 (UV radiation resistance-associated gene protein OS=Cucumis melo OX=3656 GN=LOC103496961 PE=4 SV=1) HSP 1 Score: 605.9 bits (1561), Expect = 1.1e-169 Identity = 324/361 (89.75%), Postives = 338/361 (93.63%), Query Frame = 0
BLAST of CmaCh17G001010 vs. NCBI nr
Match: XP_023006360.1 (UV radiation resistance-associated gene protein [Cucurbita maxima]) HSP 1 Score: 667.9 bits (1722), Expect = 4.8e-188 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0
BLAST of CmaCh17G001010 vs. NCBI nr
Match: XP_023549233.1 (UV radiation resistance-associated gene protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 666.8 bits (1719), Expect = 1.1e-187 Identity = 355/356 (99.72%), Postives = 356/356 (100.00%), Query Frame = 0
BLAST of CmaCh17G001010 vs. NCBI nr
Match: KAG6574859.1 (UV radiation resistance-associated protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 665.2 bits (1715), Expect = 3.1e-187 Identity = 354/356 (99.44%), Postives = 356/356 (100.00%), Query Frame = 0
BLAST of CmaCh17G001010 vs. NCBI nr
Match: XP_022959420.1 (UV radiation resistance-associated gene protein [Cucurbita moschata]) HSP 1 Score: 663.3 bits (1710), Expect = 1.2e-186 Identity = 353/356 (99.16%), Postives = 355/356 (99.72%), Query Frame = 0
BLAST of CmaCh17G001010 vs. NCBI nr
Match: KAG7013433.1 (UV radiation resistance-associated gene protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 640.6 bits (1651), Expect = 8.2e-180 Identity = 354/398 (88.94%), Postives = 356/398 (89.45%), Query Frame = 0
BLAST of CmaCh17G001010 vs. TAIR 10
Match: AT2G32760.1 (unknown protein; Has 229 Blast hits to 229 proteins in 104 species: Archae - 0; Bacteria - 2; Metazoa - 79; Fungi - 90; Plants - 49; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 403.7 bits (1036), Expect = 1.6e-112 Identity = 215/347 (61.96%), Postives = 270/347 (77.81%), Query Frame = 0
BLAST of CmaCh17G001010 vs. TAIR 10
Match: AT2G32760.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 332.0 bits (850), Expect = 5.8e-91 Identity = 174/278 (62.59%), Postives = 215/278 (77.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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