CmaCh17G000980 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G000980
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	PLASMODESMATA CALLOSE-BINDING PROTEIN 3
Location	Cma_Chr17: 480734 .. 482723 (+)
RNA-Seq Expression	CmaCh17G000980
Synteny	CmaCh17G000980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCACTGCCATTCCGTCCCAATCCCTCTCTTCCTCTCCCTTTTCCTTTCCCGATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCAACCTCCGCTGTCGACGGCGCGTACTGGTGCGTGGCCCGCAGCGAGGCGAGCTACGAAGCCCTTCAAACCGCCCTCGACTACGCCTGCGCCACCGGCGCCGACTGCACTCCGCTTCTGTCGAACGGACTCTGCTTCCTCCCGAACACCATCCAGGCCCACGCCTCCTACGCTTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCCCCTGGCTCCTGTGACTTCGCCGGCTCCGCCACCGTCGCTCAGACTGACCCCAGTCCGTCTCCTTTTTTTTTTATTAATTTTTTAGAAATAAATAAATAAATACATTATCGATAGATTTTTATTATTAATACTCTTGACATTGGTGTTCTATGCAGGTTATGGATCTTGTGTTTATCCATCTTCAATCAGGTACGCTAATTTTTTTTTTTTGTTTTTTCTTTCTATTTTAAAAATAAAATATTTTAATTTTCCAATTTATTAAAATGTGCATAGAAAAACCCTTTATCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGTATGTATTTTGGTGGAGATTTCTTCATGTTCAAGTAAATGGGTTCACTTTTTAGAGTGTTATATTAATAATTAATTCTGAAAATCATATTTATTTGGCTTCTTTTCTTTTATTTCCCACTAATTTATTAATTTAAGATTCTTTTAAAAAATGTAATAAAATTTTCCGCCATTATTTTTAAAATTCTCGATTCTCTCGATATATATTTTTTTTCTAGCCAAGAAAATAGACATTTCTCTTTATTCTATCTTTTTGGTACAATTTTTTTACAGTATTTTGAAAATAAAAAATAACTTTTTTTTTTTTTTGCTAAAATAAACTATTTTCATTTTAAATTTAGGGGGAAAAGGGAATGTAGTAACTTCTTCTACATCTTTCTGTGGGGTTCATCTAGGTTAGACACCGTTGGATCAGTCTGGCTGGGGCCCAGTGAGTGGTCAGATCCAACGGTGAGGATGGCATGGATTTACTTTCAAATTGTAAATCAGCTTTTTCCTGAAACGGTGCGTTTTGGGGAGTCTTGAAAGCTGGTCAAGAATGGTACATGTCAGATTCTGGTTGGTCATGATTACTGCAGTTGTCAGACCCCAACCAGCCTTCTTTTTAAATAAATTCTTTTGTTTTAAAAAAAACAATTGTATTTTTAAAATAATTCAATAGAAAATAAAAATAAGCTAATGAAACAAATTTATTTCCATTTATATACCTTATTTTCGTAGTTTCATTTTTAGTCATTATTGCAAAATCAATAAAATTGATATATATATATATACATACACATGTATGTATAGATCAATCGGTCGCTCAAAATTTTTAAAATTTATATAAAGAGGAGAATAAGAATTATGTAACACAATATAGTACTCTAAATCTTGTGTTATTTGGGATGATTATCCAGTGCTGCAGGAGGAGCAATCACGCCGAGCCCTCCGGCTAACACTAGCCCAACCCCGACAATAACGGTACCAGCTACGACCACCACACCGAGCTTCAACAATGGCAATTCCGGTGACATTAATGGTCTAGATCCAGTATACAACCCGGCATCAACTTCAACTCCAACCAACTCGAAAGCCTCTTCGAGTTTTAGGATCCCGAAATTCTTGTTTTCAATTGCTATCTCACTCACTTCACTAACACTATAGGAGGAGGGCTATGGAGGGTTCATTCAGTTTTGTTAGAAACAACATGTTCTTTTTGTGAAAACTAAATGACATAGGCAATATCAGTTAGGGTTTAGTTCAGCCTTCACAAATCTCCCTCTTTCTTCACAGGATTTGCTCATTGAATTCAATGCTTCAATTTCATTCTTCTAT

mRNA sequence

TTCCACTGCCATTCCGTCCCAATCCCTCTCTTCCTCTCCCTTTTCCTTTCCCGATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCAACCTCCGCTGTCGACGGCGCGTACTGGTGCGTGGCCCGCAGCGAGGCGAGCTACGAAGCCCTTCAAACCGCCCTCGACTACGCCTGCGCCACCGGCGCCGACTGCACTCCGCTTCTGTCGAACGGACTCTGCTTCCTCCCGAACACCATCCAGGCCCACGCCTCCTACGCTTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCCCCTGGCTCCTGTGACTTCGCCGGCTCCGCCACCGTCGCTCAGACTGACCCCAGTTATGGATCTTGTGTTTATCCATCTTCAATCAGTGCTGCAGGAGGAGCAATCACGCCGAGCCCTCCGGCTAACACTAGCCCAACCCCGACAATAACGGTACCAGCTACGACCACCACACCGAGCTTCAACAATGGCAATTCCGGTGACATTAATGGTCTAGATCCAGTATACAACCCGGCATCAACTTCAACTCCAACCAACTCGAAAGCCTCTTCGAGTTTTAGGATCCCGAAATTCTTGTTTTCAATTGCTATCTCACTCACTTCACTAACACTATAGGAGGAGGGCTATGGAGGGTTCATTCAGTTTTGTTAGAAACAACATGTTCTTTTTGTGAAAACTAAATGACATAGGCAATATCAGTTAGGGTTTAGTTCAGCCTTCACAAATCTCCCTCTTTCTTCACAGGATTTGCTCATTGAATTCAATGCTTCAATTTCATTCTTCTAT

Coding sequence (CDS)

ATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCAACCTCCGCTGTCGACGGCGCGTACTGGTGCGTGGCCCGCAGCGAGGCGAGCTACGAAGCCCTTCAAACCGCCCTCGACTACGCCTGCGCCACCGGCGCCGACTGCACTCCGCTTCTGTCGAACGGACTCTGCTTCCTCCCGAACACCATCCAGGCCCACGCCTCCTACGCTTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCCCCTGGCTCCTGTGACTTCGCCGGCTCCGCCACCGTCGCTCAGACTGACCCCAGTTATGGATCTTGTGTTTATCCATCTTCAATCAGTGCTGCAGGAGGAGCAATCACGCCGAGCCCTCCGGCTAACACTAGCCCAACCCCGACAATAACGGTACCAGCTACGACCACCACACCGAGCTTCAACAATGGCAATTCCGGTGACATTAATGGTCTAGATCCAGTATACAACCCGGCATCAACTTCAACTCCAACCAACTCGAAAGCCTCTTCGAGTTTTAGGATCCCGAAATTCTTGTTTTCAATTGCTATCTCACTCACTTCACTAACACTATAG

Protein sequence

MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSFRIPKFLFSIAISLTSLTL

Homology

[Close]

BLAST of CmaCh17G000980 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.6e-24
Identity = 74/185 (40.00%), Postives = 104/185 (56.22%), Query Frame = 0


Query: 11  LLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTI 70
           + +L++ LL  +      WCV +   S   LQ  LDYAC  GADC P+   G CF PNT+
Sbjct: 3   VFVLVMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPNTV 62

Query: 71  QAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITP--SPP 130
           ++H SYA NSFFQ+K  + G+CDFAG+AT + +DPSY +C +P+S S + G  TP  + P
Sbjct: 63  KSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTTCPFPASASGS-GTTTPVTTTP 122

Query: 131 ANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSFRIPKFLFS 190
           +   PT T T P  T TPS   G  G  +G++P Y        T+       + P+F F 
Sbjct: 123 STRVPTTTNTRP-YTITPS-TGGGLGIPSGINPDY--------TDPSFGFKLQSPRFGFI 176

Query: 191 IAISL 194
           +  +L
Sbjct: 183 VLFTL 176

[Close]

BLAST of CmaCh17G000980 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.2e-23
Identity = 66/174 (37.93%), Postives = 92/174 (52.87%), Query Frame = 0


Query: 12  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQ 71
           L+L L LL  +    A WCV ++  S   LQ  LDYAC  GADC P      CF P+ ++
Sbjct: 4   LVLSLLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVR 63

Query: 72  AHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITPSPPANT 131
           +H +YA NSFFQ+K  +PGSC+F G+AT   +DPSY  C +P+S S + G+ T +P    
Sbjct: 64  SHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPTSASGSSGSTTVTPGTTN 123

Query: 132 ---SPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSFRI 183
              SPT T    + T +P   N  +G   G        +   P  +  SS+F +
Sbjct: 124 PKGSPTTTTLPGSGTNSPYSGNPTNGVFGGNSTGGTTGTGINPDYTTDSSAFAL 177

[Close]

BLAST of CmaCh17G000980 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.0e-22
Identity = 63/144 (43.75%), Postives = 82/144 (56.94%), Query Frame = 0


Query: 12  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQ 71
           L+L L  L  +    A WCV ++  S   LQ  LDYAC  GADC P    G CF P+ ++
Sbjct: 4   LVLYLLTLLMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVR 63

Query: 72  AHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSIS-AAGGAITPSPPAN 131
           AH +YA NSFFQ+K  A  SC+F G+AT+  TDPSY  C +PSS S ++G   T   P  
Sbjct: 64  AHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAFPSSASGSSGSGSTTVTPGK 123

Query: 132 TSPTPTITVPATTTTPSFNNGNSG 155
            SP  + ++   TT P  N+  SG
Sbjct: 124 NSPKGSNSI---TTFPGGNSPYSG 144

[Close]

BLAST of CmaCh17G000980 vs. ExPASy Swiss-Prot
Match: Q9M069 (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-19
Identity = 44/102 (43.14%), Postives = 60/102 (58.82%), Query Frame = 0


Query: 20  PTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFN 79
           P+  V  + WCV +  A+ E LQ +LD+AC  G DC  +   G CF PN + +HA+YA N
Sbjct: 355 PSGKVTSSGWCVPKKGATNEELQASLDWACGHGIDCGAIQPGGACFEPNNVVSHAAYAMN 414

Query: 80  SFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGG 122
            +FQ+    P  CDF+ +ATV   +PSY +CVYP      GG
Sbjct: 415 MYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYPGGGGGGGG 456

[Close]

BLAST of CmaCh17G000980 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-16
Identity = 64/177 (36.16%), Postives = 91/177 (51.41%), Query Frame = 0


Query: 11  LLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTI 70
           +LL L  ++       A +C+ + E + + LQ A+DYAC  GADCT +   G C+ PNT+
Sbjct: 3   VLLPLCLIISMFTYSNAAYCLCK-EGNEQVLQKAIDYACGNGADCTQIQPTGACYQPNTV 62

Query: 71  QAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGS-CVYPSSISAAGGAITPSPPA 130
           + H   A NS++Q+KA +  +CDF G+A+ + T PS  S C+  SS S      TP+   
Sbjct: 63  KNHCDVAVNSYYQKKASSGATCDFNGAASPSTTPPSTASNCLTGSSSSGTPTTGTPTTGT 122

Query: 131 NTSPTPTITVPATTT---------TPSFNNGNSGDINGLDPVYNPASTSTPTNSKAS 178
            TS TPT   P T T         TP+    N+G  N       P S   PT+S +S
Sbjct: 123 PTSGTPTTGTPTTGTPTTGTPTSGTPTSGFPNTGTPNTGTNTGMPNSNGMPTSSSSS 178

[Close]

BLAST of CmaCh17G000980 vs. ExPASy TrEMBL
Match: A0A6J1KVB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucurbita maxima OX=3661 GN=LOC111499021 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.7e-100
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS
Sbjct: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAG 120
           NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAG
Sbjct: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAG 120

Query: 121 GAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSF 180
           GAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSF
Sbjct: 121 GAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSF 180

Query: 181 RIPKFLFSIAISLTSLTL 199
           RIPKFLFSIAISLTSLTL
Sbjct: 181 RIPKFLFSIAISLTSLTL 198

[Close]

BLAST of CmaCh17G000980 vs. ExPASy TrEMBL
Match: A0A6J1H812 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111460407 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.1e-98
Identity = 193/198 (97.47%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS
Sbjct: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAG 120
           NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT+AQTDPSYGSCVYPSSISAAG
Sbjct: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSISAAG 120

Query: 121 GAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSF 180
           GAITPSPPANTSPTPTITVPATTTTPSFNNGN+GD+NGLDPVYNPASTSTPTNSKASSSF
Sbjct: 121 GAITPSPPANTSPTPTITVPATTTTPSFNNGNTGDMNGLDPVYNPASTSTPTNSKASSSF 180

Query: 181 RIPKFLFSIAISLTSLTL 199
           RIPK LFSIAISL SLTL
Sbjct: 181 RIPKLLFSIAISLASLTL 198

[Close]

BLAST of CmaCh17G000980 vs. ExPASy TrEMBL
Match: A0A1S3C4M3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo OX=3656 GN=LOC103496965 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.3e-73
Identity = 156/205 (76.10%), Postives = 172/205 (83.90%), Query Frame = 0


Query: 1   MATLVLSH---SFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTP 60
           MAT + SH    FL   L FL+ TSAVDGAYWCVARS+A+YE+LQ A+DYACATGADCTP
Sbjct: 1   MATFLPSHYYSFFLFFFLFFLIGTSAVDGAYWCVARSDATYESLQAAIDYACATGADCTP 60

Query: 61  LLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSIS 120
           +L NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDF GSAT+AQ+DPSYGSCVYPSS+S
Sbjct: 61  ILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFGGSATIAQSDPSYGSCVYPSSLS 120

Query: 121 AAGGAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKAS 180
           +AGGAITPSPPANTS  PTITVP  T TPSFNNG +GD NG++PVYNP STS PTNS+AS
Sbjct: 121 SAGGAITPSPPANTS--PTITVPG-TATPSFNNGGTGDTNGVNPVYNPTSTSNPTNSEAS 180

Query: 181 SSFRIPK----FLFSIAISLTSLTL 199
           SSF  PK     LFSIAISL   T+
Sbjct: 181 SSFTTPKLVILILFSIAISLPLQTM 202

[Close]

BLAST of CmaCh17G000980 vs. ExPASy TrEMBL
Match: A0A0A0LND4 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G139290 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 9.2e-70
Identity = 150/203 (73.89%), Postives = 166/203 (81.77%), Query Frame = 0


Query: 1   MATLVLSH-SFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLL 60
           MAT +LSH SF      FL  TS VDGAYWCVARS+A+YE+LQ ALDYACATGA+CTP++
Sbjct: 1   MATFLLSHYSFFFFFFFFLFGTSTVDGAYWCVARSDATYESLQAALDYACATGAECTPIM 60

Query: 61  SNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAA 120
            NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT+AQ+DPSYGSCVYPSS+S+A
Sbjct: 61  LNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPSSLSSA 120

Query: 121 GGAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSS 180
           GGAITPSPPAN S  PTITVP  T TP+FNNG + D NGL+P YNP STS PTNS+AS S
Sbjct: 121 GGAITPSPPANAS--PTITVPG-TATPNFNNGGTSDTNGLNPDYNPTSTSNPTNSEASLS 180

Query: 181 FRIPK----FLFSIAISLTSLTL 199
              PK     LFSIAISL   T+
Sbjct: 181 STTPKLVILILFSIAISLPLQTM 200

[Close]

BLAST of CmaCh17G000980 vs. ExPASy TrEMBL
Match: A0A6J1HKA9 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like OS=Cucurbita moschata OX=3662 GN=LOC111464333 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 4.4e-64
Identity = 143/197 (72.59%), Postives = 159/197 (80.71%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLL-LFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLL 60
           MATL LSHSFLLLL+      TSA+   YWCVARS+ S EALQTAL+YACATGADCTP+L
Sbjct: 1   MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPIL 60

Query: 61  SNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAA 120
            NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSC+FAGSAT+A ++PSYGSCVYPSSIS A
Sbjct: 61  PNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSATIAHSNPSYGSCVYPSSISTA 120

Query: 121 GGAITPSPPANTSPTPTITVPATT-TTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASS 180
           GGAITPS P NTS  PTIT P TT TTPSFNNG + D NGL+PVYNP ST+   +S  ++
Sbjct: 121 GGAITPSLPGNTS--PTITTPTTTPTTPSFNNGGTDDTNGLNPVYNPTSTNAKASSSLTT 180

Query: 181 SFRIPKFLFSIAISLTS 196
           S  +   L SIAISL S
Sbjct: 181 SKLLILILLSIAISLGS 195

[Close]

BLAST of CmaCh17G000980 vs. NCBI nr
Match: XP_023006227.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita maxima])

HSP 1 Score: 375.2 bits (962), Expect = 3.6e-100
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS
Sbjct: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAG 120
           NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAG
Sbjct: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAG 120

Query: 121 GAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSF 180
           GAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSF
Sbjct: 121 GAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSF 180

Query: 181 RIPKFLFSIAISLTSLTL 199
           RIPKFLFSIAISLTSLTL
Sbjct: 181 RIPKFLFSIAISLTSLTL 198

[Close]

BLAST of CmaCh17G000980 vs. NCBI nr
Match: XP_022959424.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata] >XP_023548894.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.2 bits (944), Expect = 4.3e-98
Identity = 193/198 (97.47%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS
Sbjct: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAG 120
           NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT+AQTDPSYGSCVYPSSISAAG
Sbjct: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSISAAG 120

Query: 121 GAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSF 180
           GAITPSPPANTSPTPTITVPATTTTPSFNNGN+GD+NGLDPVYNPASTSTPTNSKASSSF
Sbjct: 121 GAITPSPPANTSPTPTITVPATTTTPSFNNGNTGDMNGLDPVYNPASTSTPTNSKASSSF 180

Query: 181 RIPKFLFSIAISLTSLTL 199
           RIPK LFSIAISL SLTL
Sbjct: 181 RIPKLLFSIAISLASLTL 198

[Close]

BLAST of CmaCh17G000980 vs. NCBI nr
Match: XP_038875835.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Benincasa hispida])

HSP 1 Score: 299.7 bits (766), Expect = 1.9e-77
Identity = 164/199 (82.41%), Postives = 174/199 (87.44%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MATLV SHSF  LL  FL+ TSAVDGAYWCVARS+ASYEALQ ALDYACATGADC P+L 
Sbjct: 23  MATLVFSHSF--LLFFFLIGTSAVDGAYWCVARSDASYEALQAALDYACATGADCNPILL 82

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAG 120
           NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT+AQ+DPSYGSCVYPSS SAAG
Sbjct: 83  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPSSTSAAG 142

Query: 121 GAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSF 180
           GAITPSPP NTS  PTITVPA TTTPSFNNG + D NGL+PVYNP STS+PTNS+ASSSF
Sbjct: 143 GAITPSPPTNTS--PTITVPA-TTTPSFNNGGTSDTNGLNPVYNPTSTSSPTNSRASSSF 202

Query: 181 RIPKF----LFSIAISLTS 196
            +PK     LFSIAISL S
Sbjct: 203 TVPKLLVLVLFSIAISLPS 216

[Close]

BLAST of CmaCh17G000980 vs. NCBI nr
Match: XP_008457240.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 4.8e-73
Identity = 156/205 (76.10%), Postives = 172/205 (83.90%), Query Frame = 0


Query: 1   MATLVLSH---SFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTP 60
           MAT + SH    FL   L FL+ TSAVDGAYWCVARS+A+YE+LQ A+DYACATGADCTP
Sbjct: 1   MATFLPSHYYSFFLFFFLFFLIGTSAVDGAYWCVARSDATYESLQAAIDYACATGADCTP 60

Query: 61  LLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSIS 120
           +L NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDF GSAT+AQ+DPSYGSCVYPSS+S
Sbjct: 61  ILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFGGSATIAQSDPSYGSCVYPSSLS 120

Query: 121 AAGGAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKAS 180
           +AGGAITPSPPANTS  PTITVP  T TPSFNNG +GD NG++PVYNP STS PTNS+AS
Sbjct: 121 SAGGAITPSPPANTS--PTITVPG-TATPSFNNGGTGDTNGVNPVYNPTSTSNPTNSEAS 180

Query: 181 SSFRIPK----FLFSIAISLTSLTL 199
           SSF  PK     LFSIAISL   T+
Sbjct: 181 SSFTTPKLVILILFSIAISLPLQTM 202

[Close]

BLAST of CmaCh17G000980 vs. NCBI nr
Match: KAE8651770.1 (hypothetical protein Csa_006265 [Cucumis sativus])

HSP 1 Score: 273.1 bits (697), Expect = 1.9e-69
Identity = 150/203 (73.89%), Postives = 166/203 (81.77%), Query Frame = 0


Query: 1   MATLVLSH-SFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLL 60
           MAT +LSH SF      FL  TS VDGAYWCVARS+A+YE+LQ ALDYACATGA+CTP++
Sbjct: 29  MATFLLSHYSFFFFFFFFLFGTSTVDGAYWCVARSDATYESLQAALDYACATGAECTPIM 88

Query: 61  SNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAA 120
            NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT+AQ+DPSYGSCVYPSS+S+A
Sbjct: 89  LNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPSSLSSA 148

Query: 121 GGAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSS 180
           GGAITPSPPAN S  PTITVP  T TP+FNNG + D NGL+P YNP STS PTNS+AS S
Sbjct: 149 GGAITPSPPANAS--PTITVPG-TATPNFNNGGTSDTNGLNPDYNPTSTSNPTNSEASLS 208

Query: 181 FRIPK----FLFSIAISLTSLTL 199
              PK     LFSIAISL   T+
Sbjct: 209 STTPKLVILILFSIAISLPLQTM 228

[Close]

BLAST of CmaCh17G000980 vs. TAIR 10
Match: AT4G13600.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 174.5 bits (441), Expect = 8.6e-44
Identity = 106/203 (52.22%), Postives = 129/203 (63.55%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MA  + + SFLLLLL           A WCVAR + + +ALQ ALDYACA GADC P+  
Sbjct: 39  MALCLQTLSFLLLLLF------RSSAAMWCVARFDVTSQALQAALDYACAAGADCAPIQP 98

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAG 120
           NGLCFLPNT+QAHASYAFNS+FQR AMAPGSC+FAG++T+A+TDPSYGSCVYP+S+  AG
Sbjct: 99  NGLCFLPNTVQAHASYAFNSYFQRAAMAPGSCNFAGTSTIAKTDPSYGSCVYPNSVRNAG 158

Query: 121 GAI-------TPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTN 180
           G+        TPS     SP  T+  P+ TTT  F  G  G         NP  T+T TN
Sbjct: 159 GSASTTTVGGTPSTTVGNSPMTTLRPPSGTTTSPFGIGGGG--------LNPQGTTTTTN 218

Query: 181 SKASSSFRIPKFLFSIAISLTSL 197
           +  S S+ I K   SIA+ +  L
Sbjct: 219 TDESGSYIINKSTVSIALFVALL 227

[Close]

BLAST of CmaCh17G000980 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 )

HSP 1 Score: 112.5 bits (280), Expect = 4.0e-25
Identity = 74/185 (40.00%), Postives = 104/185 (56.22%), Query Frame = 0


Query: 11  LLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTI 70
           + +L++ LL  +      WCV +   S   LQ  LDYAC  GADC P+   G CF PNT+
Sbjct: 3   VFVLVMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPNTV 62

Query: 71  QAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITP--SPP 130
           ++H SYA NSFFQ+K  + G+CDFAG+AT + +DPSY +C +P+S S + G  TP  + P
Sbjct: 63  KSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTTCPFPASASGS-GTTTPVTTTP 122

Query: 131 ANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSFRIPKFLFS 190
           +   PT T T P  T TPS   G  G  +G++P Y        T+       + P+F F 
Sbjct: 123 STRVPTTTNTRP-YTITPS-TGGGLGIPSGINPDY--------TDPSFGFKLQSPRFGFI 176

Query: 191 IAISL 194
           +  +L
Sbjct: 183 VLFTL 176

[Close]

BLAST of CmaCh17G000980 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 )

HSP 1 Score: 109.0 bits (271), Expect = 4.4e-24
Identity = 66/174 (37.93%), Postives = 92/174 (52.87%), Query Frame = 0


Query: 12  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQ 71
           L+L L LL  +    A WCV ++  S   LQ  LDYAC  GADC P      CF P+ ++
Sbjct: 4   LVLSLLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVR 63

Query: 72  AHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITPSPPANT 131
           +H +YA NSFFQ+K  +PGSC+F G+AT   +DPSY  C +P+S S + G+ T +P    
Sbjct: 64  SHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPTSASGSSGSTTVTPGTTN 123

Query: 132 ---SPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSFRI 183
              SPT T    + T +P   N  +G   G        +   P  +  SS+F +
Sbjct: 124 PKGSPTTTTLPGSGTNSPYSGNPTNGVFGGNSTGGTTGTGINPDYTTDSSAFAL 177

[Close]

BLAST of CmaCh17G000980 vs. TAIR 10
Match: AT1G09460.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 4.9e-23
Identity = 68/160 (42.50%), Postives = 96/160 (60.00%), Query Frame = 0


Query: 23  AVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFF 82
           +V G  WCVA+  AS  +LQ ALDYAC   ADC+ L   G C+ P ++Q+HAS+AFNS++
Sbjct: 131 SVSGQSWCVAKPGASQVSLQQALDYACGI-ADCSQLQQGGNCYSPISLQSHASFAFNSYY 190

Query: 83  QRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITPSPPANTSPTP---TITV 142
           Q K  +P SCDF G+A++  T+PS GSC+Y +  S +    TP     T+PTP   T+  
Sbjct: 191 Q-KNPSPQSCDFGGAASLVNTNPSTGSCIYQTGSSTS----TPMTAGTTTPTPSTQTVNQ 250

Query: 143 PATTTTPSFNNGNSGDINGLDP-VYNPASTSTPTNSKASS 179
           P  T+TP    G      G  P ++NPA+ ++ T +  SS
Sbjct: 251 PPVTSTPIIPTGGGIIGVGTPPAIFNPANPTSNTLNNPSS 284

[Close]

BLAST of CmaCh17G000980 vs. TAIR 10
Match: AT5G08000.1 (glucan endo-1,3-beta-glucosidase-like protein 3 )

HSP 1 Score: 105.1 bits (261), Expect = 6.4e-23
Identity = 63/144 (43.75%), Postives = 82/144 (56.94%), Query Frame = 0


Query: 12  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQ 71
           L+L L  L  +    A WCV ++  S   LQ  LDYAC  GADC P    G CF P+ ++
Sbjct: 4   LVLYLLTLLMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVR 63

Query: 72  AHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSIS-AAGGAITPSPPAN 131
           AH +YA NSFFQ+K  A  SC+F G+AT+  TDPSY  C +PSS S ++G   T   P  
Sbjct: 64  AHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAFPSSASGSSGSGSTTVTPGK 123

Query: 132 TSPTPTITVPATTTTPSFNNGNSG 155
            SP  + ++   TT P  N+  SG
Sbjct: 124 NSPKGSNSI---TTFPGGNSPYSG 144

The following BLAST results are available for this feature:

BLAST of CmaCh17G000980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ86	5.6e-24	40.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3...	[more]
Q9FNQ2	6.2e-23	37.93	PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1...	[more]
Q9SD84	9.0e-22	43.75	PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2...	[more]
Q9M069	1.1e-19	43.14	Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 ...	[more]
Q93V72	1.5e-16	36.16	PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4...	[more]

BLAST of CmaCh17G000980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KVB1	1.7e-100	100.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucurbita maxima OX=3661 GN=LOC111499...	[more]
A0A6J1H812	2.1e-98	97.47	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A1S3C4M3	2.3e-73	76.10	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo OX=3656 GN=LOC103496965 ...	[more]
A0A0A0LND4	9.2e-70	73.89	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G139290 PE=4 SV=...	[more]
A0A6J1HKA9	4.4e-64	72.59	PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of CmaCh17G000980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006227.1	3.6e-100	100.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita maxima]	[more]
XP_022959424.1	4.3e-98	97.47	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata] >XP_023548894....	[more]
XP_038875835.1	1.9e-77	82.41	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Benincasa hispida]	[more]
XP_008457240.1	4.8e-73	76.10	PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo]	[more]
KAE8651770.1	1.9e-69	73.89	hypothetical protein Csa_006265 [Cucumis sativus]	[more]

BLAST of CmaCh17G000980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13600.1	8.6e-44	52.22	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G18650.1	4.0e-25	40.00	plasmodesmata callose-binding protein 3	[more]
AT5G61130.1	4.4e-24	37.93	plasmodesmata callose-binding protein 1	[more]
AT1G09460.1	4.9e-23	42.50	Carbohydrate-binding X8 domain superfamily protein	[more]
AT5G08000.1	6.4e-23	43.75	glucan endo-1,3-beta-glucosidase-like protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 28..112 e-value: 4.1E-42 score: 155.9
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 29..99 e-value: 2.0E-19 score: 70.1
None	No IPR available	GENE3D	1.20.58.1040		coord: 22..118 e-value: 7.6E-10 score: 41.0
None	No IPR available	PANTHER	PTHR31044:SF47	CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN	coord: 11..187
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 11..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G000980.1	CmaCh17G000980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
cellular_component	GO:0009506	plasmodesma