CmaCh16G012700 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCTTTGCCCCCACGTCCGCGCCATTCGCCTCTTCCGCCCAATGATCTGGAGTCCCTTTTAATCCTCTCCCGATCATCTTTATTTCTTCATTTATTTTCCAAATCTCATCCTCCAATTCCGTTCTCCACCAAAATCCCTTCACTCCCTCCTTATCCCTAACCATCCTCTCAACGCTACTCGCTTTTTCCTTCTGATTCTACTTGGAATTCTTCTCATATGGCCGCTCAGGTTCAGCCTCCTCCGCCGGAGCAAAACCAACTCGAAAACCTCGACGTCTTCAAGATTAAAGGCAGAGACAAACAAGGCCGCCGGATTCTCCGCATTACCGGAAAGTTCTTTCCAGGTTCCCTCTCTCTCTCTCTCTTTCTCTCATTCTTTATCGGTGAAATTAATTTTTTGTCGTTTCTTTTGACCATTGAGTTTGAATGTGCTCAAGAAACATCTGTATGTTTTCCTTACCATGATCTGTTTCTGTTTTCTTGCTCTTTTCATAGATGAAATTAAATTTCTCTCGTTGTCATCCGCGCGAACTGTACATTTGAATGTGCTCAAGAAGAATATGAAATTTTCCTTAATTTGCTCTGATTCGATTTTCTTGCTCTGGTCTGCTTTTTTTTTTTTTTTAAATTGAATTTTCACAGTGAAGCATATATAGATTTGCCTTGCTATGCTCTGATTCGGTTTTCTTGCTCTGTTCTGTTTCTGTTTTCTTGTTCTTGACTGTGCTTAAGAAGTATCTGCATATTTGCACTGCTGTGCTCTGATTAAATTTCTAGCTGTTTTGAGCGATGAGATTGATGTTTTCTTTTTTTGAAAATCAGCACGGATTGTGAGTTTGGATGTGGTGAAGAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTTCACACCGACGTTCAAAGGAGCCAAAATTTCCCCGGAATCGCCGCCCTCCGATCAATCTATGAAGCAATTCCGGCCACCGTCAAGGCTAATCTCGAGGCCGTGTACTTCGTTCACCCAGACCTCCAGGCCAGGCTCTTCCTCGCCACACTCGGCCGCATTTTCTTCACTAGCGAGTATATTTTCTAACCCTTCTTCTTCAATCAATTTCAGGTTTTCCCTATATTCTTATTCCCAATATTTTCCTTTTTGAATCCTAGAAAATAATGTAATTTTTATGAATTTTTCTGTATTTTTCTAAATTAAGAAAAACACTGATAATATACTATAAAAGCACTTTTTAATTTATTTCAAATATCTTAATTTATTAGATCCAATAACAAATATACTCTGAATTTTGAATTTAGTTTTATTGTGGTCCTCCATCTTTTTTTTTTTTTTTTCTAATATGTAATTGCATTTTTAAAATTTATAAATGTATTAGAAATAAAATTGAAAAGTTTAATTAAATATTTACCTTTTTTTTTTAATGCACTCAAAGACATTATTTTATACACCTTACCCAATAAAGGGATAATGATAAAAAATAAAATTAAAATATTAAAAAGGAAAAGTAGGAATAATTTTATGATGTTTTGTTGATAATATTACGTTATGGTTCATAATGAGAGGGAATGTTTGGATGTGGTAGGATGTATGGGAAGATAAAGTACGTGAGTAGAATTGATCTGCTGTGGGAGCACGTACGGAGGAACGAGATCGAGGTTCCAGAGTTCATATACGATCACGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGTCTGGAGAGTGACCATCCTAGGGTTTACGGTGCACCCTCAATTGATTCGCACGTGTACTCGATGAGGTGCATTTCCTAGATTCCTTTCTTCTTTGTTTTAAAGAAAGGGTGGCCTTTGTTTAA ATCTTTGCCCCCACGTCCGCGCCATTCGCCTCTTCCGCCCAATGATCTGGAGTCCCTTTTAATCCTCTCCCGATCATCTTTATTTCTTCATTTATTTTCCAAATCTCATCCTCCAATTCCGTTCTCCACCAAAATCCCTTCACTCCCTCCTTATCCCTAACCATCCTCTCAACGCTACTCGCTTTTTCCTTCTGATTCTACTTGGAATTCTTCTCATATGGCCGCTCAGGTTCAGCCTCCTCCGCCGGAGCAAAACCAACTCGAAAACCTCGACGTCTTCAAGATTAAAGGCAGAGACAAACAAGGCCGCCGGATTCTCCGCATTACCGGAAAGTTCTTTCCAGCACGGATTGTGAGTTTGGATGTGGTGAAGAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTTCACACCGACGTTCAAAGGAGCCAAAATTTCCCCGGAATCGCCGCCCTCCGATCAATCTATGAAGCAATTCCGGCCACCGTCAAGGCTAATCTCGAGGCCGTGTACTTCGTTCACCCAGACCTCCAGGCCAGGCTCTTCCTCGCCACACTCGGCCGCATTTTCTTCACTAGCGAGATGTATGGGAAGATAAAGTACGTGAGTAGAATTGATCTGCTGTGGGAGCACGTACGGAGGAACGAGATCGAGGTTCCAGAGTTCATATACGATCACGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGTCTGGAGAGTGACCATCCTAGGGTTTACGGTGCACCCTCAATTGATTCGCACGTGTACTCGATGAGGGTGGCCTTTGTTTAA ATGGCCGCTCAGGTTCAGCCTCCTCCGCCGGAGCAAAACCAACTCGAAAACCTCGACGTCTTCAAGATTAAAGGCAGAGACAAACAAGGCCGCCGGATTCTCCGCATTACCGGAAAGTTCTTTCCAGCACGGATTGTGAGTTTGGATGTGGTGAAGAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTTCACACCGACGTTCAAAGGAGCCAAAATTTCCCCGGAATCGCCGCCCTCCGATCAATCTATGAAGCAATTCCGGCCACCGTCAAGGCTAATCTCGAGGCCGTGTACTTCGTTCACCCAGACCTCCAGGCCAGGCTCTTCCTCGCCACACTCGGCCGCATTTTCTTCACTAGCGAGATGTATGGGAAGATAAAGTACGTGAGTAGAATTGATCTGCTGTGGGAGCACGTACGGAGGAACGAGATCGAGGTTCCAGAGTTCATATACGATCACGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGTCTGGAGAGTGACCATCCTAGGGTTTACGGTGCACCCTCAATTGATTCGCACGTGTACTCGATGAGGGTGGCCTTTGTTTAA MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFLATLGRIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSIDSHVYSMRVAFV Homology
BLAST of CmaCh16G012700 vs. ExPASy Swiss-Prot
Match: Q7JUR6 (Protein GDAP2 homolog OS=Drosophila melanogaster OX=7227 GN=Gdap2 PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.0e-12 Identity = 39/140 (27.86%), Postives = 76/140 (54.29%), Query Frame = 0
BLAST of CmaCh16G012700 vs. ExPASy Swiss-Prot
Match: Q292F9 (Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA15091 PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.0e-12 Identity = 39/140 (27.86%), Postives = 76/140 (54.29%), Query Frame = 0
BLAST of CmaCh16G012700 vs. ExPASy Swiss-Prot
Match: A7T167 (Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.2e-09 Identity = 33/140 (23.57%), Postives = 72/140 (51.43%), Query Frame = 0
BLAST of CmaCh16G012700 vs. ExPASy Swiss-Prot
Match: Q0IHU9 (Protein prune homolog 2 OS=Xenopus tropicalis OX=8364 GN=Prune2 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 9.2e-06 Identity = 32/100 (32.00%), Postives = 52/100 (52.00%), Query Frame = 0
BLAST of CmaCh16G012700 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein ) HSP 1 Score: 275.0 bits (702), Expect = 4.8e-74 Identity = 131/200 (65.50%), Postives = 164/200 (82.00%), Query Frame = 0
BLAST of CmaCh16G012700 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein ) HSP 1 Score: 174.9 bits (442), Expect = 6.7e-44 Identity = 77/168 (45.83%), Postives = 117/168 (69.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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