CmaCh16G012390 (gene) Cucurbita maxima (Rimu) v1.1

BLAST of CmaCh16G012390 vs. ExPASy Swiss-Prot
Match: Q94C69 (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.0e-56
Identity = 152/299 (50.84%), Postives = 180/299 (60.20%), Query Frame = 0

Query: 43  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 102
           R  G V WF+D KG+GFI PD  G +LFVHQSSI SDG+RSL +G+ VE++IA G DGK+
Sbjct: 10  RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGSDGKT 69

Query: 103 KAIEVVALDGSSGNRRDNF--GGGG-----GRGGR-----GGGGGGYGFGGWRGGDRRNG 162
           KAIEV A  G S N+++N   G GG     G  G       GG GG  FGG  GG RR+G
Sbjct: 70  KAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGG--GGGRRSG 129

Query: 163 SSGAGGGGCYQCGEQGHLARDCTRA--SNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGG 222
               G G CY CG+ GH ARDC ++   N GGGGGGG  C++CGEVGHLA+DC RG SGG
Sbjct: 130 ----GEGECYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDC-RGGSGG 189

Query: 223 ---------GAGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGSCFNCGEYGHLARDCQN 282
                    G+GG  CY CGG GH ARDC + G GG  GGGG +C+ CG  GH+A+ C +
Sbjct: 190 NRYGGGGGRGSGGDGCYMCGGVGHFARDCRQNG-GGNVGGGGSTCYTCGGVGHIAKVCTS 249

Query: 283 ESRGSGGGGGRF-----------------------GGGGANTCFNCGKSGHFARECPDV 296
           +    GGGGGR                        GGGG+N CF CGK GHFAREC  V
Sbjct: 250 KIPSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFARECTSV 300

BLAST of CmaCh16G012390 vs. ExPASy Swiss-Prot
Match: O65639 (Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.2e-51
Identity = 145/293 (49.49%), Postives = 165/293 (56.31%), Query Frame = 0

Query: 43  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 102
           R TG V WFN SKG+GFI PD    +LFVHQSSI S+GYRSL VGD VEF I  G DGK+
Sbjct: 10  RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69

Query: 103 KAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGY------------GFGGWRGGDRRNG 162
           KA+ V A  G S  + +N  G G R G GGG G Y            G GG  GG  R  
Sbjct: 70  KAVNVTAPGGGSLKKENNSRGNGARRG-GGGSGCYNCGELGHISKDCGIGGGGGGGERR- 129

Query: 163 SSGAGGGGCYQCGEQGHLARDCTRASN---RGGGGGGGGGCFTCGEVGHLARDCPRGNSG 222
               GG GCY CG+ GH ARDCT A N   RG   GG  GC+TCG+VGH+ARDC + + G
Sbjct: 130 --SRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVG 189

Query: 223 GG-------AGGGACYNCGGFGHLARDCNRGGAGG---GSGGGGGSCFNCGEYGHLARDC 282
            G        G   CY CG  GH ARDC +  A G     GGG G+C++CG  GH+ARDC
Sbjct: 190 NGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDC 249

Query: 283 ---QNESRG---SGGGG---------GRFGGGGANTCFNCGKSGHFARECPDV 296
              +  SRG    GG G         G  GGG  N C+ CGK GHFAREC  V
Sbjct: 250 ATKRQPSRGCYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFARECSSV 298

BLAST of CmaCh16G012390 vs. ExPASy Swiss-Prot
Match: P27484 (Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.6e-38
Identity = 127/263 (48.29%), Postives = 144/263 (54.75%), Query Frame = 0

Query: 39  MAEE---RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIA 98
           MAEE   R  G V+WF+D KGFGFI PD  G DLFVHQS I+S+G+RSL  G+ VEF++ 
Sbjct: 1   MAEESGQRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVE 60

Query: 99  PGDDGKSKAIEVVALDGSS--GNRRDNFGGGGGRGGRGGGGGGYGFGGWRGGDRRNGSSG 158
            G DG++KA++V   DG++  G R    GGGGG GGRGGGG G G GG+ GG  R GS G
Sbjct: 61  SGGDGRTKAVDVTGPDGAAVQGGR----GGGGGGGGRGGGGYGGGSGGY-GGGGRGGSRG 120

Query: 159 AGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGAGGG 218
            GGG                     GGGGG GGG                G  GGG GGG
Sbjct: 121 YGGGD-----------------GGYGGGGGYGGG-------------SRYGGGGGGYGGG 180

Query: 219 ACYNCGGFGHLARDCNRGGAGGGSGGGGGSCFNCGEYGHLARDCQNESRGSGGGGGRF-- 278
                            GG GGG  GGG  CF CGE GH ARDC     G GGGGGRF  
Sbjct: 181 -----------------GGYGGGGSGGGSGCFKCGESGHFARDCSQS--GGGGGGGRFGG 209

Query: 279 --GGGGANTCFNCGKSGHFAREC 293
             GGGG   C+ CG+ GHFAREC
Sbjct: 241 GGGGGGGGGCYKCGEDGHFAREC 209

BLAST of CmaCh16G012390 vs. ExPASy Swiss-Prot
Match: Q41188 (Cold shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=CSP2 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.7e-36
Identity = 108/223 (48.43%), Postives = 128/223 (57.40%), Query Frame = 0

Query: 42  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 101
           ER  G V+WF+  KGFGFI PD  G DLFVHQSSI+S+G+RSL   + VEF++   ++ +
Sbjct: 9   ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNR 68

Query: 102 SKAIEVVALDGS--SGNRRDNFGGGGGRGGRGGGGGGYGFGGWRGGDRRNGSSGAGGGGC 161
            KAI+V   DG+   GN      GGG  GGRG      GFGG RGG R +G    GGGG 
Sbjct: 69  PKAIDVSGPDGAPVQGN-----SGGGSSGGRG------GFGGGRGGGRGSGGGYGGGGGG 128

Query: 162 YQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGAGGGACYNCG 221
           Y                 RGGGG GG  C+ CGE GH+ARDC  G  G G GGG     G
Sbjct: 129 Y---------------GGRGGGGRGGSDCYKCGEPGHMARDCSEGGGGYGGGGGGYGGGG 188

Query: 222 GFGHLARDCNRGGAGGGSGGGGGSCFNCGEYGHLARDCQNESR 263
           G+G        GG G G GGGGGSC++CGE GH ARDC +  R
Sbjct: 189 GYG--GGGGGYGGGGRGGGGGGGSCYSCGESGHFARDCTSGGR 203

BLAST of CmaCh16G012390 vs. ExPASy Swiss-Prot
Match: Q38896 (Cold shock domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=CSP4 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.0e-33
Identity = 107/217 (49.31%), Postives = 124/217 (57.14%), Query Frame = 0

Query: 42  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 101
           +R  G V+WF+  KGFGFI P   G DLFVHQSSI+S+G+RSL   + VEF +   + G+
Sbjct: 13  DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72

Query: 102 SKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGYGFGGWRGGDRRNGSSGAGGGGCYQ 161
            KAIEV   DG+    + N GGGG  GGRGG GGG G GG RGG    GS G G GG   
Sbjct: 73  PKAIEVSGPDGAP--VQGNSGGGGSSGGRGGFGGGGGRGGGRGG----GSYGGGYGG--- 132

Query: 162 CGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSG-GGAGGGACYNCGG 221
                       R S   GGGGG   CF CGE GH+AR+C +G  G  G GGG  Y  GG
Sbjct: 133 ------------RGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGGGRYGSGG 192

Query: 222 FGHLARDCNRGGAGGGSGGGGGSCFNCGEYGHLARDC 258
                        GGG GGGG SC++CGE GH ARDC
Sbjct: 193 -------------GGGGGGGGLSCYSCGESGHFARDC 195

BLAST of CmaCh16G012390 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 )

HSP 1 Score: 219.5 bits (558), Expect = 3.5e-57
Identity = 152/299 (50.84%), Postives = 180/299 (60.20%), Query Frame = 0

Query: 43  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 102
           R  G V WF+D KG+GFI PD  G +LFVHQSSI SDG+RSL +G+ VE++IA G DGK+
Sbjct: 10  RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGSDGKT 69

Query: 103 KAIEVVALDGSSGNRRDNF--GGGG-----GRGGR-----GGGGGGYGFGGWRGGDRRNG 162
           KAIEV A  G S N+++N   G GG     G  G       GG GG  FGG  GG RR+G
Sbjct: 70  KAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGG--GGGRRSG 129

Query: 163 SSGAGGGGCYQCGEQGHLARDCTRA--SNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGG 222
               G G CY CG+ GH ARDC ++   N GGGGGGG  C++CGEVGHLA+DC RG SGG
Sbjct: 130 ----GEGECYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDC-RGGSGG 189

Query: 223 ---------GAGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGSCFNCGEYGHLARDCQN 282
                    G+GG  CY CGG GH ARDC + G GG  GGGG +C+ CG  GH+A+ C +
Sbjct: 190 NRYGGGGGRGSGGDGCYMCGGVGHFARDCRQNG-GGNVGGGGSTCYTCGGVGHIAKVCTS 249

Query: 283 ESRGSGGGGGRF-----------------------GGGGANTCFNCGKSGHFARECPDV 296
           +    GGGGGR                        GGGG+N CF CGK GHFAREC  V
Sbjct: 250 KIPSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFARECTSV 300

BLAST of CmaCh16G012390 vs. TAIR 10
Match: AT4G36020.1 (cold shock domain protein 1 )

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-52
Identity = 145/293 (49.49%), Postives = 165/293 (56.31%), Query Frame = 0

Query: 43  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 102
           R TG V WFN SKG+GFI PD    +LFVHQSSI S+GYRSL VGD VEF I  G DGK+
Sbjct: 10  RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69

Query: 103 KAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGY------------GFGGWRGGDRRNG 162
           KA+ V A  G S  + +N  G G R G GGG G Y            G GG  GG  R  
Sbjct: 70  KAVNVTAPGGGSLKKENNSRGNGARRG-GGGSGCYNCGELGHISKDCGIGGGGGGGERR- 129

Query: 163 SSGAGGGGCYQCGEQGHLARDCTRASN---RGGGGGGGGGCFTCGEVGHLARDCPRGNSG 222
               GG GCY CG+ GH ARDCT A N   RG   GG  GC+TCG+VGH+ARDC + + G
Sbjct: 130 --SRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVG 189

Query: 223 GG-------AGGGACYNCGGFGHLARDCNRGGAGG---GSGGGGGSCFNCGEYGHLARDC 282
            G        G   CY CG  GH ARDC +  A G     GGG G+C++CG  GH+ARDC
Sbjct: 190 NGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDC 249

Query: 283 ---QNESRG---SGGGG---------GRFGGGGANTCFNCGKSGHFARECPDV 296
              +  SRG    GG G         G  GGG  N C+ CGK GHFAREC  V
Sbjct: 250 ATKRQPSRGCYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFARECSSV 298

BLAST of CmaCh16G012390 vs. TAIR 10
Match: AT4G38680.1 (glycine rich protein 2 )

HSP 1 Score: 152.9 bits (385), Expect = 4.1e-37
Identity = 108/223 (48.43%), Postives = 128/223 (57.40%), Query Frame = 0

Query: 42  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 101
           ER  G V+WF+  KGFGFI PD  G DLFVHQSSI+S+G+RSL   + VEF++   ++ +
Sbjct: 9   ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNR 68

Query: 102 SKAIEVVALDGS--SGNRRDNFGGGGGRGGRGGGGGGYGFGGWRGGDRRNGSSGAGGGGC 161
            KAI+V   DG+   GN      GGG  GGRG      GFGG RGG R +G    GGGG 
Sbjct: 69  PKAIDVSGPDGAPVQGN-----SGGGSSGGRG------GFGGGRGGGRGSGGGYGGGGGG 128

Query: 162 YQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGAGGGACYNCG 221
           Y                 RGGGG GG  C+ CGE GH+ARDC  G  G G GGG     G
Sbjct: 129 Y---------------GGRGGGGRGGSDCYKCGEPGHMARDCSEGGGGYGGGGGGYGGGG 188

Query: 222 GFGHLARDCNRGGAGGGSGGGGGSCFNCGEYGHLARDCQNESR 263
           G+G        GG G G GGGGGSC++CGE GH ARDC +  R
Sbjct: 189 GYG--GGGGGYGGGGRGGGGGGGSCYSCGESGHFARDCTSGGR 203

BLAST of CmaCh16G012390 vs. TAIR 10
Match: AT2G21060.1 (glycine-rich protein 2B )

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-34
Identity = 107/217 (49.31%), Postives = 124/217 (57.14%), Query Frame = 0

Query: 42  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 101
           +R  G V+WF+  KGFGFI P   G DLFVHQSSI+S+G+RSL   + VEF +   + G+
Sbjct: 13  DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72

Query: 102 SKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGYGFGGWRGGDRRNGSSGAGGGGCYQ 161
            KAIEV   DG+    + N GGGG  GGRGG GGG G GG RGG    GS G G GG   
Sbjct: 73  PKAIEVSGPDGAP--VQGNSGGGGSSGGRGGFGGGGGRGGGRGG----GSYGGGYGG--- 132

Query: 162 CGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSG-GGAGGGACYNCGG 221
                       R S   GGGGG   CF CGE GH+AR+C +G  G  G GGG  Y  GG
Sbjct: 133 ------------RGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGGGRYGSGG 192

Query: 222 FGHLARDCNRGGAGGGSGGGGGSCFNCGEYGHLARDC 258
                        GGG GGGG SC++CGE GH ARDC
Sbjct: 193 -------------GGGGGGGGLSCYSCGESGHFARDC 195