CmaCh16G011690 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGAACCCATTCTCCCCCTCACCGCCTTCACTCTTCTGAAAGATTCATCCTTCTCTCTCTCTCCTCTTTTTCTCTCTCTAGAACCGGCCAAAAACTCTCTCTCTCTCTCTCTCTCTGTTTTCATTTTTTTCCCGATAAATTTCAAGCTGGCGATCGAAAACCACGATAATACTGTCCGTGAAATCAAGCCCAAGAGCAGAAGAATCATGGTATGACGCTTTTTAGGCAGTTTTTTTTCTACTATTTCACTTTCCCGCATTCATTTTCCCTCGCTTTTCTTCATCGGGTTGTTGAATTTTTTCTGTTTAATCTTCTGGGTTTTGCTTCGTTTTCGATTTTTTCATTTGGGTATTGCTTAGTTTTTGATTTTCTCATATGGATTTCGAATTTTCTGGCTTCACTTTCCCGCATTCTGTTCTTCATTCACTGTTCCTCTGTTCTTGTCATCTGGGTTTGCGTTTTAGATCGATTCTCCCTTTTGGGTATTGATTTTTTTCTGTTTTCTCATCTGGGTTTTGCTTAGTTTAACACTTTTTCATTTGGGTATTGCTTGTTTTTCGATTTCGGGCTTCGATTTTTCTGATTTGACTTCCCGCATTTTGTTCTTCCTTCACTGTTCCTCTGTTCTTGTCATCTGGGTTTGTGTTTTAGTTCGATTCTCCCTTCTGGGTATTGGTTTTCTGATATTTTCTCATCTGGGCTTCGATTTGTCTGATTTGACTTTCCCGCATTCTGTTTTTCTTTCACGGTTTCTTTGTTTTTCTCATATGGGTATGGCTTTACCCTCGATTTTCGCATCTGGGTATTGATTTTCTTCTGTTTTCTCATCTGGGTTTTGCTTATTATCCTGTTTTTTCATTTGGGTATTGCTTAGTTTTCGATTTTCTCATCTGGGTTTTCGATTGTTTTCCTCTGTTCTTGATGAGTTCTGTTTCAACAGGGTGCTGGAGGTCCTGATGATGAAGACAACCGATGGCCGCCATGGCTAAAACCTCTACTAAGAGAAACCTTCTTCGTTCAATGCAAACACCACATCGATTCCCACAAAAGCGAATGCAATATGTACTGTTTAGATTGTATGAACGGCGCTCTCTGTTCTCTTTGCCTCAACTTTCACAAAGATCATCGCGCCATTCAGGTCTTGAACTCTCTCCCCATTTTTTCACCTAAATTCAAACCCTAATTTCCCCGTTTTTCTAATCAAATTCTTTGTTTCTTACAGATTCGAAGGTCTTCTTACCATGATGTGATCAGAGTTTCTGAGATTCAAAAGGTTTTGGACATTTCTGGTGTTCAAACTTACATTATCAACAGCGCTAGAGTTGTGTTCTTGAACGAAAGGCCTCAGCCGCGTCCTGGCAAAGGCGTTACGAACACTTGTGAAGTCTGTGAACGCAGCCTCCTTGATTCCTTCCGATTCTGTTCCCTTGGTTGTAAGGTATTGTTCTGTTTGGTTTCCTGGAAAATCAGTGGGAAAATTTAGGAAAAACCCATTTGAAATTGCCCCCAATGAATGCGTTTCGTTAGGATTTGCATTAGTTTCTTTCTTGTTTGGATGCTGAGAAAATTGGTGGGAAAATGAAGGAAAATCCAAATGGAAATTCGTGTCATCAATGTGTTTGTTTGACTGCTTCAAATTCTATTGGACTCTTAATTTTCTCGGAAACCAAACAAGTCAGAAAGGCTTCCCATTTGTCAATCCTCTGTAACCTGATTTTGATTTTGCAGATAGTCGGGACATCGAGGAATTTCCAGAAGAAGAGAGTGGCGGGAGAGGCGGGGGTCGCCGCCACAATGGCGGTATCCGACTCGGAGGACTCGTACAGTAGTAGCAATCATAGGCGGAGCAAGAGCAACAACAGCCACAACAGCCACAACAGCCACAGCAGCAACAAGTTTCAGAGTTTTAGTCCTTCGACGCCGCCTCCAACTTCGGTTAACTATAGGACAGCTAAACGGAGGAAGGGAATCCCACATCGAGCTCCGATGGGAGGGCTAGTTTTAGAATATTAGTATTATTACTTTCTCTTAATTACTTTAAGACCCCTGAAATGTAATGTAATTGCCACGATGCTCCTCTCCGATGCCTGAAGCTTTGTGAAAGAGGCCGGTGTTGGAGGCTTACTCTTAGAGCTTTGTATATAGAAGAAGCATAGATATGGGGGAAGAAGAAGAAGGGAAAAAGAAATAAGGCAAATGTGAAAATATGTGAAATTTAGAGGACTAAAAGGAAAAATAAGTTTGGTAGGTTTGAGTAATTATATGAAATAGGTTGGAGTTATAGGGAATTATACTAAGTTTTGGGGTGAAGTTGTAAATATTGGGTGGGATTTTTCTCTTTCTTATGCTTATTAGATGTCTTGATGAGGATATAATGTAATCCTTGGAATAATGGAATTTGGAAAATGATGTTTATATGTAAAATTAAATGAAAATAAAATATATTGTATTATTTATTTTCTCTATTTATTATTATTATTTTTTTATTAATTATCCCTCTAAAAAATTATATTTTTAGTTTTTGAATTTTTAATATTTGG CAAGAACCCATTCTCCCCCTCACCGCCTTCACTCTTCTGAAAGATTCATCCTTCTCTCTCTCTCCTCTTTTTCTCTCTCTAGAACCGGCCAAAAACTCTCTCTCTCTCTCTCTCTCTGTTTTCATTTTTTTCCCGATAAATTTCAAGCTGGCGATCGAAAACCACGATAATACTGTCCGTGAAATCAAGCCCAAGAGCAGAAGAATCATGGGTGCTGGAGGTCCTGATGATGAAGACAACCGATGGCCGCCATGGCTAAAACCTCTACTAAGAGAAACCTTCTTCGTTCAATGCAAACACCACATCGATTCCCACAAAAGCGAATGCAATATGTACTGTTTAGATTGTATGAACGGCGCTCTCTGTTCTCTTTGCCTCAACTTTCACAAAGATCATCGCGCCATTCAGATTCGAAGGTCTTCTTACCATGATGTGATCAGAGTTTCTGAGATTCAAAAGGTTTTGGACATTTCTGGTGTTCAAACTTACATTATCAACAGCGCTAGAGTTGTGTTCTTGAACGAAAGGCCTCAGCCGCGTCCTGGCAAAGGCGTTACGAACACTTGTGAAGTCTGTGAACGCAGCCTCCTTGATTCCTTCCGATTCTGTTCCCTTGGTTGTAAGATAGTCGGGACATCGAGGAATTTCCAGAAGAAGAGAGTGGCGGGAGAGGCGGGGGTCGCCGCCACAATGGCGGTATCCGACTCGGAGGACTCGTACAGTAGTAGCAATCATAGGCGGAGCAAGAGCAACAACAGCCACAACAGCCACAACAGCCACAGCAGCAACAAGTTTCAGAGTTTTAGTCCTTCGACGCCGCCTCCAACTTCGGTTAACTATAGGACAGCTAAACGGAGGAAGGGAATCCCACATCGAGCTCCGATGGGAGGGCTAGTTTTAGAATATTAGTATTATTACTTTCTCTTAATTACTTTAAGACCCCTGAAATGTAATGTAATTGCCACGATGCTCCTCTCCGATGCCTGAAGCTTTGTGAAAGAGGCCGGTGTTGGAGGCTTACTCTTAGAGCTTTGTATATAGAAGAAGCATAGATATGGGGGAAGAAGAAGAAGGGAAAAAGAAATAAGGCAAATGTGAAAATATGTGAAATTTAGAGGACTAAAAGGAAAAATAAGTTTGGTAGGTTTGAGTAATTATATGAAATAGGTTGGAGTTATAGGGAATTATACTAAGTTTTGGGGTGAAGTTGTAAATATTGGGTGGGATTTTTCTCTTTCTTATGCTTATTAGATGTCTTGATGAGGATATAATGTAATCCTTGGAATAATGGAATTTGGAAAATGATGTTTATATGTAAAATTAAATGAAAATAAAATATATTGTATTATTTATTTTCTCTATTTATTATTATTATTTTTTTATTAATTATCCCTCTAAAAAATTATATTTTTAGTTTTTGAATTTTTAATATTTGG ATGGGTGCTGGAGGTCCTGATGATGAAGACAACCGATGGCCGCCATGGCTAAAACCTCTACTAAGAGAAACCTTCTTCGTTCAATGCAAACACCACATCGATTCCCACAAAAGCGAATGCAATATGTACTGTTTAGATTGTATGAACGGCGCTCTCTGTTCTCTTTGCCTCAACTTTCACAAAGATCATCGCGCCATTCAGATTCGAAGGTCTTCTTACCATGATGTGATCAGAGTTTCTGAGATTCAAAAGGTTTTGGACATTTCTGGTGTTCAAACTTACATTATCAACAGCGCTAGAGTTGTGTTCTTGAACGAAAGGCCTCAGCCGCGTCCTGGCAAAGGCGTTACGAACACTTGTGAAGTCTGTGAACGCAGCCTCCTTGATTCCTTCCGATTCTGTTCCCTTGGTTGTAAGATAGTCGGGACATCGAGGAATTTCCAGAAGAAGAGAGTGGCGGGAGAGGCGGGGGTCGCCGCCACAATGGCGGTATCCGACTCGGAGGACTCGTACAGTAGTAGCAATCATAGGCGGAGCAAGAGCAACAACAGCCACAACAGCCACAACAGCCACAGCAGCAACAAGTTTCAGAGTTTTAGTCCTTCGACGCCGCCTCCAACTTCGGTTAACTATAGGACAGCTAAACGGAGGAAGGGAATCCCACATCGAGCTCCGATGGGAGGGCTAGTTTTAGAATATTAG MGAGGPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFHKDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSRNFQKKRVAGEAGVAATMAVSDSEDSYSSSNHRRSKSNNSHNSHNSHSSNKFQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVLEY Homology
BLAST of CmaCh16G011690 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.9e-31 Identity = 63/127 (49.61%), Postives = 85/127 (66.93%), Query Frame = 0
BLAST of CmaCh16G011690 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein ) HSP 1 Score: 303.9 bits (777), Expect = 1.1e-82 Identity = 157/230 (68.26%), Postives = 181/230 (78.70%), Query Frame = 0
BLAST of CmaCh16G011690 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein ) HSP 1 Score: 303.1 bits (775), Expect = 1.9e-82 Identity = 156/229 (68.12%), Postives = 174/229 (75.98%), Query Frame = 0
BLAST of CmaCh16G011690 vs. TAIR 10
Match: AT1G32700.2 (PLATZ transcription factor family protein ) HSP 1 Score: 245.7 bits (626), Expect = 3.6e-65 Identity = 130/192 (67.71%), Postives = 150/192 (78.12%), Query Frame = 0
BLAST of CmaCh16G011690 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein ) HSP 1 Score: 226.5 bits (576), Expect = 2.2e-59 Identity = 125/243 (51.44%), Postives = 160/243 (65.84%), Query Frame = 0
BLAST of CmaCh16G011690 vs. TAIR 10
Match: AT1G21000.2 (PLATZ transcription factor family protein ) HSP 1 Score: 226.5 bits (576), Expect = 2.2e-59 Identity = 125/243 (51.44%), Postives = 160/243 (65.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|