CmaCh16G011550 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G011550
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionVQ domain-containing protein
LocationCma_Chr16: 8877074 .. 8878021 (-)
RNA-Seq ExpressionCmaCh16G011550
SyntenyCmaCh16G011550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGGAATAGGCAGAATGAGAATTTAGGCGTGAACAAATTGGGGAAGAACATTAGGAAGAGCCCAATTCACCAGCCAAATTTTGGAAATAATGCTGCTAGGCCTCAACCCCAGCCACAAATTTACAATATAAGCAAGAATGATTTTAGGAACATTGTTCAGCAGCTTACAGGCTCACCATCTCAGGACCCTCACCCTCCTAGAGCTCCACAAAATCCACCAAAACCCCAAAGCTTGAGGTTGCAGAGAATACGACCTCCTCCGTTAACGCCGATTAATCGACCGAACATGCCTGCTCCTATCCCTGCCCCTGTTCCTGTGCCTCCACCCCAGGCTCTACTCACTAATAATGTGCCAAGGCCTGCACAATTTGCTCAGCCACCTCCTAGACAATTACCACCATTGGCACCGGGAGGAGACTCGCTTTGGCCGAACCCTGCTGCTGAGTCCCCCATTTCAGCATACATGCGTTACCTTCAAAATTCAATGATGAATCCATCTCCAATGGCGAACCAGTTACCACAAACGCAGATTCCTGGTCAAATGCATCCTCCTCAAGCACCACCATCTGGTTTATTGCCTTATCCTAATCCACCTGTTCCTGCTCTTCCACCCTCGAGATTAAACGGTCCTCCACCGCCCGTGCCAAACTTTCCTTCACCGAACTGGAACGCTCCCGCCCTTTTACCGTCCCCAACTTCCCAGTTTCTATTGCCTTCTCCTACTGGCTACTACAATTTGTTGTCCCCAAAATCACCATATCCATTACTTTCTCCAGGAATACAGTTTTCTCCGCCGCTGACTCCTAATTTTTCATTTCCATCCACGCCTCAATCAGGGATCTTAGGTCCAGGGCCTCATCCACCACCTTCCCCAGGGGTTATGTTCCCATTGTCTCCTTCCGGGTTTTTTCCCATCTTGAGTCCAAGATGGAGAGATCAATAA

mRNA sequence

ATGGATAGGAATAGGCAGAATGAGAATTTAGGCGTGAACAAATTGGGGAAGAACATTAGGAAGAGCCCAATTCACCAGCCAAATTTTGGAAATAATGCTGCTAGGCCTCAACCCCAGCCACAAATTTACAATATAAGCAAGAATGATTTTAGGAACATTGTTCAGCAGCTTACAGGCTCACCATCTCAGGACCCTCACCCTCCTAGAGCTCCACAAAATCCACCAAAACCCCAAAGCTTGAGGTTGCAGAGAATACGACCTCCTCCGTTAACGCCGATTAATCGACCGAACATGCCTGCTCCTATCCCTGCCCCTGTTCCTGTGCCTCCACCCCAGGCTCTACTCACTAATAATGTGCCAAGGCCTGCACAATTTGCTCAGCCACCTCCTAGACAATTACCACCATTGGCACCGGGAGGAGACTCGCTTTGGCCGAACCCTGCTGCTGAGTCCCCCATTTCAGCATACATGCGTTACCTTCAAAATTCAATGATGAATCCATCTCCAATGGCGAACCAGTTACCACAAACGCAGATTCCTGGTCAAATGCATCCTCCTCAAGCACCACCATCTGGTTTATTGCCTTATCCTAATCCACCTGTTCCTGCTCTTCCACCCTCGAGATTAAACGGTCCTCCACCGCCCGTGCCAAACTTTCCTTCACCGAACTGGAACGCTCCCGCCCTTTTACCGTCCCCAACTTCCCAGTTTCTATTGCCTTCTCCTACTGGCTACTACAATTTGTTGTCCCCAAAATCACCATATCCATTACTTTCTCCAGGAATACAGTTTTCTCCGCCGCTGACTCCTAATTTTTCATTTCCATCCACGCCTCAATCAGGGATCTTAGGTCCAGGGCCTCATCCACCACCTTCCCCAGGGGTTATGTTCCCATTGTCTCCTTCCGGGTTTTTTCCCATCTTGAGTCCAAGATGGAGAGATCAATAA

Coding sequence (CDS)

ATGGATAGGAATAGGCAGAATGAGAATTTAGGCGTGAACAAATTGGGGAAGAACATTAGGAAGAGCCCAATTCACCAGCCAAATTTTGGAAATAATGCTGCTAGGCCTCAACCCCAGCCACAAATTTACAATATAAGCAAGAATGATTTTAGGAACATTGTTCAGCAGCTTACAGGCTCACCATCTCAGGACCCTCACCCTCCTAGAGCTCCACAAAATCCACCAAAACCCCAAAGCTTGAGGTTGCAGAGAATACGACCTCCTCCGTTAACGCCGATTAATCGACCGAACATGCCTGCTCCTATCCCTGCCCCTGTTCCTGTGCCTCCACCCCAGGCTCTACTCACTAATAATGTGCCAAGGCCTGCACAATTTGCTCAGCCACCTCCTAGACAATTACCACCATTGGCACCGGGAGGAGACTCGCTTTGGCCGAACCCTGCTGCTGAGTCCCCCATTTCAGCATACATGCGTTACCTTCAAAATTCAATGATGAATCCATCTCCAATGGCGAACCAGTTACCACAAACGCAGATTCCTGGTCAAATGCATCCTCCTCAAGCACCACCATCTGGTTTATTGCCTTATCCTAATCCACCTGTTCCTGCTCTTCCACCCTCGAGATTAAACGGTCCTCCACCGCCCGTGCCAAACTTTCCTTCACCGAACTGGAACGCTCCCGCCCTTTTACCGTCCCCAACTTCCCAGTTTCTATTGCCTTCTCCTACTGGCTACTACAATTTGTTGTCCCCAAAATCACCATATCCATTACTTTCTCCAGGAATACAGTTTTCTCCGCCGCTGACTCCTAATTTTTCATTTCCATCCACGCCTCAATCAGGGATCTTAGGTCCAGGGCCTCATCCACCACCTTCCCCAGGGGTTATGTTCCCATTGTCTCCTTCCGGGTTTTTTCCCATCTTGAGTCCAAGATGGAGAGATCAATAA

Protein sequence

MDRNRQNENLGVNKLGKNIRKSPIHQPNFGNNAARPQPQPQIYNISKNDFRNIVQQLTGSPSQDPHPPRAPQNPPKPQSLRLQRIRPPPLTPINRPNMPAPIPAPVPVPPPQALLTNNVPRPAQFAQPPPRQLPPLAPGGDSLWPNPAAESPISAYMRYLQNSMMNPSPMANQLPQTQIPGQMHPPQAPPSGLLPYPNPPVPALPPSRLNGPPPPVPNFPSPNWNAPALLPSPTSQFLLPSPTGYYNLLSPKSPYPLLSPGIQFSPPLTPNFSFPSTPQSGILGPGPHPPPSPGVMFPLSPSGFFPILSPRWRDQ
Homology
BLAST of CmaCh16G011550 vs. ExPASy Swiss-Prot
Match: O82170 (Protein HAIKU1 OS=Arabidopsis thaliana OX=3702 GN=IKU1 PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.3e-64
Identity = 183/415 (44.10%), Postives = 214/415 (51.57%), Query Frame = 0

Query: 1   MDRNRQNENLGVNKLGKNIRKSPIHQPNFG---NNAARP--QPQPQIYNISKNDFRNIVQ 60
           MDR RQN++LGVN++GKNIRKSP+HQ  F    +N A P  Q QPQ+YNISKNDFR+IVQ
Sbjct: 1   MDRPRQNDHLGVNRIGKNIRKSPLHQSTFAASTSNGAAPRLQTQPQVYNISKNDFRSIVQ 60

Query: 61  QLTGSPSQDPHPPRAPQNPPKPQSLRLQRIRPPPLTPINRPNMPAPIPAPVPVPPPQALL 120
           QLTGSPS++  P     N  +PQ+ RLQRIRP PLT +NRP +P P  AP    P     
Sbjct: 61  QLTGSPSRESLPRPPQNNSLRPQNTRLQRIRPSPLTQLNRPAVPLPSMAPPQSHP----- 120

Query: 121 TNNVPRPAQFAQPPPRQLP-------PLAPGGDSLWPNPAAESPISAYMRYLQNSMMNPS 180
                   QFA+ PP Q P       P+    D  W N  AESP+S YMRYLQ+S+ +  
Sbjct: 121 --------QFARQPPHQPPFPQTTQQPMMGHRDQFWSN-TAESPVSEYMRYLQSSLGDSG 180

Query: 181 PMANQL-----------------------------------------------PQTQIPG 240
           P ANQ+                                                Q+Q   
Sbjct: 181 PNANQMQPGHEQRPYIPGHEQRPYVPGNEQQPYMPGNEQRPYIPGHEQRSYMPAQSQSQS 240

Query: 241 QMHPPQAPPSGLLPYPNP----------------------PVP-ALPPSRLNGPPPPVP- 300
           Q  P   P   ++P P P                      PVP  LP  R N P P  P 
Sbjct: 241 QPQPQPQPQQHMMPGPQPRMNMQGPLQPNQYLPPPGLVPSPVPHNLPSPRFNAPVPVTPT 300

Query: 301 -----------NFPSPNWNAPALLPSPTSQFLLPSPTGYYNLLSPKSPYPLLSPGIQFSP 315
                       FPSP +N    L SPTSQFL PSPTGY N+ SP+SPYPLLSPG+Q+  
Sbjct: 301 QPSPMFSQMYGGFPSPRYNGFGPLQSPTSQFLQPSPTGYPNMFSPRSPYPLLSPGVQYPQ 360

BLAST of CmaCh16G011550 vs. ExPASy Swiss-Prot
Match: Q9M9F0 (VQ motif-containing protein 9 OS=Arabidopsis thaliana OX=3702 GN=VQ9 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14
Identity = 97/262 (37.02%), Postives = 126/262 (48.09%), Query Frame = 0

Query: 37  QPQPQIYNISKNDFRNIVQQLTGSPSQD--PHPPRAPQNPPKP-QSLRLQRIRPPPLTPI 96
           Q QP +YNI+KNDFR++VQ+LTGSP+ +    PP+ P + PKP QS RL RIRPPPL  +
Sbjct: 77  QHQPPVYNINKNDFRDVVQKLTGSPAHERISAPPQQPIHHPKPQQSSRLHRIRPPPL--V 136

Query: 97  NRPNMPAPIPAPVPVPPPQALLTNNVPRPAQFAQP--PPRQLPPLAPGGDSLWPNPAAES 156
           +  N P  +     +P     +  N        +P  P   LPPL P       + AAES
Sbjct: 137 HVINRPPGLLNDALIPQGSHHMNQNWTGVGFNLRPTAPLSPLPPLPP------VHAAAES 196

Query: 157 PISAYMRYLQNSMMNPSPMANQLPQTQIPGQMHPPQAPPSGLLPYPNPPVPALPPSRLNG 216
           P+S+YMRYLQNSM        +                 SGL P      P     + N 
Sbjct: 197 PVSSYMRYLQNSMFAIDSNRKEF----------------SGLSPLAPLVSPRWYQQQENA 256

Query: 217 PPPPVPNFPSPNWNAPALLPSPTSQFLLPSPTGYYNLLSPKSPYPLLSPGIQFSPPLTPN 276
           PP    +FP P+   P+   S T    +P+P  +    SPKSPY LLSP I  SP  +  
Sbjct: 257 PPSQHNSFPPPHPPPPSSAVSQTVPTSIPAPPLFGCSSSPKSPYGLLSPSILLSPS-SGQ 306

Query: 277 FSFPSTPQSGILGPGPHPPPSP 294
             FP +P +        P PSP
Sbjct: 317 LGFPVSPTT-------VPLPSP 306

BLAST of CmaCh16G011550 vs. ExPASy Swiss-Prot
Match: P13983 (Extensin OS=Nicotiana tabacum OX=4097 GN=HRGPNT3 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.8e-06
Identity = 97/314 (30.89%), Postives = 116/314 (36.94%), Query Frame = 0

Query: 23  PIHQPNFGNN---AARPQPQPQIYNISKNDFRNIVQQLTGSPSQDPHPPRAPQNPP---- 82
           P HQP+   +   + R QPQP  Y+     +    Q    SP+  P PP     PP    
Sbjct: 242 PTHQPSPLRHLPPSPRRQPQPPTYSPPPPAY---AQSPQPSPTYSPPPPTYSPPPPSPIY 301

Query: 83  KPQSLRLQRIRPPPLTPINRPNMPAPIPAPVPVPPPQALL-------------TNNVPRP 142
            P         PP  TP   P  PA  P P   PPP   L               + P P
Sbjct: 302 SPPPPAYSPSPPPTPTPTFSPPPPAYSPPPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPP 361

Query: 143 AQFAQPPPRQLPPLAPGGDSLWPNPAAESPISAYMRYLQNSMMNPSPMANQLPQTQIPGQ 202
             ++ PPP  LPP  P      P P+   P   Y          P P A   P    P  
Sbjct: 362 PSYSPPPPTYLPPPPPSSP---PPPSFSPPPPTY------EQSPPPPPAYSPPLPAPPTY 421

Query: 203 MHPPQA----PPSGLLPYPNPPVPALPPSRLNGPPPPVPNFPSPNWNAPA---LLPSPTS 262
             PP      PP+   P P PP  + PP   + PPPP  + P P ++ P      P P  
Sbjct: 422 SPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPP 481

Query: 263 QFLLPSPTGYYNLLSPKSPYPLLSPGIQFSPPLTPNFSFPSTPQSGILGPGPH---PPPS 307
               P P  Y    SP  P P+ SP      PL P FS P  P+   L P PH    PP+
Sbjct: 482 PTYSPPPPAY----SPPPPSPIYSPPPPQVQPLPPTFS-PPPPRRIHLPPPPHRQPRPPT 538

BLAST of CmaCh16G011550 vs. TAIR 10
Match: AT2G35230.1 (VQ motif-containing protein )

HSP 1 Score: 247.3 bits (630), Expect = 1.7e-65
Identity = 183/415 (44.10%), Postives = 214/415 (51.57%), Query Frame = 0

Query: 1   MDRNRQNENLGVNKLGKNIRKSPIHQPNFG---NNAARP--QPQPQIYNISKNDFRNIVQ 60
           MDR RQN++LGVN++GKNIRKSP+HQ  F    +N A P  Q QPQ+YNISKNDFR+IVQ
Sbjct: 1   MDRPRQNDHLGVNRIGKNIRKSPLHQSTFAASTSNGAAPRLQTQPQVYNISKNDFRSIVQ 60

Query: 61  QLTGSPSQDPHPPRAPQNPPKPQSLRLQRIRPPPLTPINRPNMPAPIPAPVPVPPPQALL 120
           QLTGSPS++  P     N  +PQ+ RLQRIRP PLT +NRP +P P  AP    P     
Sbjct: 61  QLTGSPSRESLPRPPQNNSLRPQNTRLQRIRPSPLTQLNRPAVPLPSMAPPQSHP----- 120

Query: 121 TNNVPRPAQFAQPPPRQLP-------PLAPGGDSLWPNPAAESPISAYMRYLQNSMMNPS 180
                   QFA+ PP Q P       P+    D  W N  AESP+S YMRYLQ+S+ +  
Sbjct: 121 --------QFARQPPHQPPFPQTTQQPMMGHRDQFWSN-TAESPVSEYMRYLQSSLGDSG 180

Query: 181 PMANQL-----------------------------------------------PQTQIPG 240
           P ANQ+                                                Q+Q   
Sbjct: 181 PNANQMQPGHEQRPYIPGHEQRPYVPGNEQQPYMPGNEQRPYIPGHEQRSYMPAQSQSQS 240

Query: 241 QMHPPQAPPSGLLPYPNP----------------------PVP-ALPPSRLNGPPPPVP- 300
           Q  P   P   ++P P P                      PVP  LP  R N P P  P 
Sbjct: 241 QPQPQPQPQQHMMPGPQPRMNMQGPLQPNQYLPPPGLVPSPVPHNLPSPRFNAPVPVTPT 300

Query: 301 -----------NFPSPNWNAPALLPSPTSQFLLPSPTGYYNLLSPKSPYPLLSPGIQFSP 315
                       FPSP +N    L SPTSQFL PSPTGY N+ SP+SPYPLLSPG+Q+  
Sbjct: 301 QPSPMFSQMYGGFPSPRYNGFGPLQSPTSQFLQPSPTGYPNMFSPRSPYPLLSPGVQYPQ 360

BLAST of CmaCh16G011550 vs. TAIR 10
Match: AT1G32610.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 159.8 bits (403), Expect = 3.5e-39
Identity = 137/325 (42.15%), Postives = 171/325 (52.62%), Query Frame = 0

Query: 8   ENLGVNKLGKNIRKSPIHQPNFGNNAARPQPQPQIYNISKNDFRNIVQQLTGSPSQDPHP 67
           + LGVNK+GKNI+KSP+             PQPQ Y++S NDF +IVQQLT SPS++  P
Sbjct: 9   DQLGVNKIGKNIKKSPL-------------PQPQGYSMSNNDFTSIVQQLTDSPSRESLP 68

Query: 68  PRAPQNPPKPQSLRLQRIRPPPLTPINRPNMPAPIPAPVPVPPPQALLTNNVPRPAQFAQ 127
              P+N  KPQ    Q+IRP     INRP +P P+ A               P     A+
Sbjct: 69  QPLPRNLLKPQ----QKIRPVGQIQINRPCVPPPVMAQ--------------PTHEFVAR 128

Query: 128 PPPRQLP----PLAPGGDSLWPNPAAESPISAYMRYLQNSMMNPSPMANQL-------PQ 187
           PP   LP    P+   GD    N  AES +S YMRY Q+S+ +  P  NQ+        Q
Sbjct: 129 PPMHPLPHGSQPIISHGDQFGSN-TAESSVSVYMRYRQSSLGDSGPNENQMQPSHDNQQQ 188

Query: 188 TQIPGQM-----HPPQAPPSGLLPYPNPPVPALPPSRLNGPPPPVPN--FPSPNWNAPAL 247
            Q+ GQ      H P+   S          P LP  + +GPP  + N   PSP +N   +
Sbjct: 189 PQVEGQAQSHNHHSPRFNDSA------RNTPILPTPKFDGPPQQMHNNSLPSPRFNGRGI 248

Query: 248 LPSPTSQFLLPSPTGYYNLLSPKSPYPLLSPGIQFSPPLTP-NFSFPSTPQSGILGPGPH 307
           LP+PTSQ+   SPT Y NLLSP+SP PLLS G+Q+ PPLTP N++F S  Q GILGPG  
Sbjct: 249 LPTPTSQYRPQSPTAYRNLLSPRSPSPLLSTGVQYPPPLTPRNYTFSSMDQPGILGPGTI 289

Query: 308 PPPSPGVMFPLSPSGFFPILSPRWR 314
           P P        SP G  PI S RWR
Sbjct: 309 PLPH------ASPFGVIPISSQRWR 289

BLAST of CmaCh16G011550 vs. TAIR 10
Match: AT1G32610.2 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 159.8 bits (403), Expect = 3.5e-39
Identity = 137/325 (42.15%), Postives = 171/325 (52.62%), Query Frame = 0

Query: 8   ENLGVNKLGKNIRKSPIHQPNFGNNAARPQPQPQIYNISKNDFRNIVQQLTGSPSQDPHP 67
           + LGVNK+GKNI+KSP+             PQPQ Y++S NDF +IVQQLT SPS++  P
Sbjct: 9   DQLGVNKIGKNIKKSPL-------------PQPQGYSMSNNDFTSIVQQLTDSPSRESLP 68

Query: 68  PRAPQNPPKPQSLRLQRIRPPPLTPINRPNMPAPIPAPVPVPPPQALLTNNVPRPAQFAQ 127
              P+N  KPQ    Q+IRP     INRP +P P+ A               P     A+
Sbjct: 69  QPLPRNLLKPQ----QKIRPVGQIQINRPCVPPPVMAQ--------------PTHEFVAR 128

Query: 128 PPPRQLP----PLAPGGDSLWPNPAAESPISAYMRYLQNSMMNPSPMANQL-------PQ 187
           PP   LP    P+   GD    N  AES +S YMRY Q+S+ +  P  NQ+        Q
Sbjct: 129 PPMHPLPHGSQPIISHGDQFGSN-TAESSVSVYMRYRQSSLGDSGPNENQMQPSHDNQQQ 188

Query: 188 TQIPGQM-----HPPQAPPSGLLPYPNPPVPALPPSRLNGPPPPVPN--FPSPNWNAPAL 247
            Q+ GQ      H P+   S          P LP  + +GPP  + N   PSP +N   +
Sbjct: 189 PQVEGQAQSHNHHSPRFNDSA------RNTPILPTPKFDGPPQQMHNNSLPSPRFNGRGI 248

Query: 248 LPSPTSQFLLPSPTGYYNLLSPKSPYPLLSPGIQFSPPLTP-NFSFPSTPQSGILGPGPH 307
           LP+PTSQ+   SPT Y NLLSP+SP PLLS G+Q+ PPLTP N++F S  Q GILGPG  
Sbjct: 249 LPTPTSQYRPQSPTAYRNLLSPRSPSPLLSTGVQYPPPLTPRNYTFSSMDQPGILGPGTI 289

Query: 308 PPPSPGVMFPLSPSGFFPILSPRWR 314
           P P        SP G  PI S RWR
Sbjct: 309 PLPH------ASPFGVIPISSQRWR 289

BLAST of CmaCh16G011550 vs. TAIR 10
Match: AT2G35230.2 (VQ motif-containing protein )

HSP 1 Score: 147.1 bits (370), Expect = 2.3e-35
Identity = 114/287 (39.72%), Postives = 131/287 (45.64%), Query Frame = 0

Query: 124 QFAQPPPRQLP-------PLAPGGDSLWPNPAAESPISAYMRYLQNSMMNPSPMANQL-- 183
           QFA+ PP Q P       P+    D  W N  AESP+S YMRYLQ+S+ +  P ANQ+  
Sbjct: 9   QFARQPPHQPPFPQTTQQPMMGHRDQFWSN-TAESPVSEYMRYLQSSLGDSGPNANQMQP 68

Query: 184 ---------------------------------------------PQTQIPGQMHPPQAP 243
                                                         Q+Q   Q  P   P
Sbjct: 69  GHEQRPYIPGHEQRPYVPGNEQQPYMPGNEQRPYIPGHEQRSYMPAQSQSQSQPQPQPQP 128

Query: 244 PSGLLPYPNP----------------------PVP-ALPPSRLNGPPPPVP--------- 303
              ++P P P                      PVP  LP  R N P P  P         
Sbjct: 129 QQHMMPGPQPRMNMQGPLQPNQYLPPPGLVPSPVPHNLPSPRFNAPVPVTPTQPSPMFSQ 188

Query: 304 ---NFPSPNWNAPALLPSPTSQFLLPSPTGYYNLLSPKSPYPLLSPGIQFSPPLTPNFSF 315
               FPSP +N    L SPTSQFL PSPTGY N+ SP+SPYPLLSPG+Q+  PLTPNFSF
Sbjct: 189 MYGGFPSPRYNGFGPLQSPTSQFLQPSPTGYPNMFSPRSPYPLLSPGVQYPQPLTPNFSF 248

BLAST of CmaCh16G011550 vs. TAIR 10
Match: AT5G46780.1 (VQ motif-containing protein )

HSP 1 Score: 112.1 bits (279), Expect = 8.3e-25
Identity = 119/316 (37.66%), Postives = 149/316 (47.15%), Query Frame = 0

Query: 2   DRNRQNENLGVNKLGKNIRKSPIHQPNFGNNAARPQPQPQIYNISKNDFRNIVQQLTG-S 61
           + +  + +LGVNK+GKNIRK P +Q N   N     PQ  +YNI+K DFR+IVQQLTG  
Sbjct: 13  NNDHHHHHLGVNKMGKNIRKDPPNQQNQQQN-----PQALVYNINKTDFRSIVQQLTGLG 72

Query: 62  PSQDPHPPRAPQNPPKPQSLRLQRIRPPPLTPINRPNMPAPIPAPVPVPPPQALLTNNVP 121
            +   +PP+   N PKP + RL ++RP PLT +N P      P P P PPP      +VP
Sbjct: 73  STSSVNPPQT--NHPKPPNSRLVKVRPAPLTQLNHP------PPPPPPPPP----VQSVP 132

Query: 122 RPAQFAQPPPRQLPPLAPGGDSLWPNPAAESPISAYMRYLQNSMMNPSPMANQL-PQTQI 181
             ++  QP            +    NP AESPISAYMRYL  S    SP+ N++ PQ Q 
Sbjct: 133 IASEPVQPV-----------NQFSSNP-AESPISAYMRYLIES----SPVGNRVQPQNQN 192

Query: 182 PGQMHPPQAPPSGLLPYPNPPVPALPPSRLNGPPPPVPNFPSPNWNAPALLPSPTSQFLL 241
           P Q      P +GL             S   GP              P    SP SQF L
Sbjct: 193 PVQ------PSTGLF-----------QSHQTGP-------------NPMSFQSPASQFAL 237

Query: 242 PSPTGYYNLLSPKSPYPLLSPGIQFSPPLTPNFSFPSTPQSGILGPGPHPPPSPGVMFPL 301
            SP        P+SP+PL SP   FSP       F       +      PPPSPG     
Sbjct: 253 -SP-------QPRSPFPLFSPNFAFSP------RFLGGSNESL------PPPSPGF---- 237

Query: 302 SPSGFFPILSPRWRDQ 316
               FFP+LSP W++Q
Sbjct: 313 ----FFPLLSPLWKNQ 237

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O821702.3e-6444.10Protein HAIKU1 OS=Arabidopsis thaliana OX=3702 GN=IKU1 PE=1 SV=1[more]
Q9M9F01.7e-1437.02VQ motif-containing protein 9 OS=Arabidopsis thaliana OX=3702 GN=VQ9 PE=1 SV=1[more]
P139833.8e-0630.89Extensin OS=Nicotiana tabacum OX=4097 GN=HRGPNT3 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT2G35230.11.7e-6544.10VQ motif-containing protein [more]
AT1G32610.13.5e-3942.15hydroxyproline-rich glycoprotein family protein [more]
AT1G32610.23.5e-3942.15hydroxyproline-rich glycoprotein family protein [more]
AT2G35230.22.3e-3539.72VQ motif-containing protein [more]
AT5G46780.18.3e-2537.66VQ motif-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 38..63
e-value: 3.5E-10
score: 39.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
IPR039825VQ motif-containing protein 5/14PANTHERPTHR33783:SF1PROTEIN HAIKU1coord: 1..315
IPR039612VQ motif-containing protein 5/9/14PANTHERPTHR33783PROTEIN HAIKU1coord: 1..315

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G011550.1CmaCh16G011550.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009960 endosperm development
biological_process GO:0080113 regulation of seed growth