CmaCh16G011180 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G011180
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	nudix hydrolase 8-like
Location	Cma_Chr16: 8599453 .. 8603486 (+)
RNA-Seq Expression	CmaCh16G011180
Synteny	CmaCh16G011180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATGTCGTTGTTGGAGCCAAGAACAGCGGTTTCTTCCCCGTTTTCCAGCCTTAAGCACCAAGTTGAGCGGTTTTCTAGGTGTTCTTCTTGCAAAGGTATACTCCCTTGATGTGTTGGGAAAGTTTGAATTCTTGATATGTTGTGTTTGATTGTATCTTTCTTCTACATTTAGTGTTGGATTCCTCGAAAATTGGCAGATGTTTTGTGGACCAAACATTTTTGTTCTGTGGTTTTGCTGTTTTTGGACGTTGGATTCATTTGGAAAGATTAATGATGTTGTGTTCTCTGTTGAAATTTGGTTCTGTGTTTAGGTAGATTTTTCAGGGCTTCTTATTCAAGAGTTCCAAACAAAGCATCTTGTAGTGGAGGTGTGAGTTCAATTAGCCAAGAAAAACTAGCAGCTGAAGCTTTTACTCATAAGATAAATGGAACAAATGGATTGAGTTCTAAGCTGTTTTCAAGAGATAGTAGATTGTTAGATGCTGCTGATGATCAATATGATGGAATTGTTATTGATCCAAATGGATTACCTTCGAATCCGATCGTCTTTTCGTCGAATCTTCGTTTCTCTCTGTCTCATTGGAAAAAGAAGGTAAAGATTTCTGTATGTCATGTTTCATGTTTATATTTCCACTAATGATTTAAGTGATGCCTTTGCTTGAACCATATATAATTTGCTCGTTTGAAAATTGTATTTGTGAGATTCCACGTCGGTTGGAGAGAGGAACGGAACATTCCTTATAAGGGTATGGAAACCTTTCCCTATGAGACGTGTTTTAAAACTGTGAGGTTGAAGATGATATGTAACGGGTCAAACCGGATAATATTTGTTAGTGGTGGGCTTGGATTGTTACAAATGGTATCAGAGCCAGACACCAGGCGGTGTACCAGTGAGGACGCTGGCCCTCAAGGGGGTGGATTATGAGATCTCATATCGGTCGGAGAGGGGAACGAAACATTCCTTGTAAGAGTGTGGAAACCTCTCCCTAACATACGCGTTTTAAAACCGTGAGGTTGACGGCGATTCGTAACGGGTCAAAGCAGACAATATTTGTTAGCGGTGGGCTTGGGTTGTTACAAATGGTATCAGAGCCAGACACCGAGCAGTGTGCCAGCAAGGACGCTGGGCCCCCAAGAGATGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAGCATTTCTTATAAGTGTGTGGAAAATTCTCCCAAGCAAATGCATTTTAAAACTGTGAGGCTGATTGCGATATGTAACGGGTCAAAGCGGACAATATCTGTTAGTAGTGAGCTTGGGCTGTTACAGATTTTCGCAACGTTGATGTCATGTAGAAACCTCAAAGTTCACAAAAGTTTCTTAACCGCACCAAACATATGTTTGACACCTTGGTTTTCTTGTCCAATTCAATGTAGTTCCATATTTCAGGTGCAATAGAGAGGCATAAACTACTACATATTCAGTGAGGATAGTATACTGAGAATCTCTTCTGCTGCAGGGAAAGAAGGGAGTTTGGCTTAAATTGCTAGTCGAACAGTCCGAGCTTGTTCCGATTGCCATAAAGGTAATGTTCGTATCTAAACCCGATTAATAGCTTACCCTTCTTTACTCTACTCGGACTTCAGTGAATCCTATCGTTATTTCATTTTAATAGAGTCCGATTCGCTCGAAGCGAGGAGAATGTTTATATGTTTGCTTAGCATGTTCCTCTTGGACTGGTTATTTGGATCACAGGCAGGATTTCAATACCATCATGCTGAGCCGGGTTACTTGATGTTAACTTATTGGATACCCGATGGACCCTGCATGCTTCCTGCAAATGCTTCTCATCACGTCGGGGTCGGAGGATTCGTCATCAATGACAAAAACGAGGTATATCACAATCCTTAGATCTCTATAGCATAAGGTTGTTCTATTTTCTCGACTCGTCGTTTACGACAAATTCTAGCCGATCACACAACAATTGTTTTCGACATTCATGTAAAAAGACTAAACATATGTAATTAGCTGGTCATTGGCAACAGGTCCTGGTTGTGCAAGAAAAATACTGTTCTCCACAATTCACTAATTTTTGGAAGATACCAACCGGTTTCATCGTTGAGGTACGTGGCTTTCCGCTCGGTTCATCGTCTCGATTGTACGTGTTAGATTTAGAGATTCTTTTTTTCTTCTTTTTATCAACTCTTTTGAAACTTTTCGTGTTTATCAGAAGGAAGAGATCTATACAGGAGTTGCTAGAGAAGTTAAGGAGGAAACTGGTGTAAGTATTTTCTGTCAAACCTTTCATCATGAATGCAAATTCCAACAAAGAATCTAAACTTTAGAGATCATCAATCGCATCGGTTGGAGAGGAGAACGAAACATTTCTTATAAGGGTGTAGAAACCTCTCCCTAGCAGACGTTTTAAAACCGTGAGACTGACGGTGGTAGGTAACGAGCCAAAGTGGACAATATCTACTAGCGGTGGGCTTGGGCTATTACAAATGGTACTAAAGCCAAACACCGGGCGATGTGCCAGTGAGGACGTTGAGTCCCCAAGGGGGGTGGATTGTGGGATCATACATCCGTTAGAGAGGAGGACAAAACAATTCTTATAAAGTTGTGGAAACCTTAGCCTAGCAAACGCGTTTTAAAACCGTGAGACTAACGGTGGTAAATAACGAGCGAAAGTGGACAATTTCTACTAGCGGTGGACTTGGGCTGTTACAAATGCTACCAGAGCCAAATACCGGGCGGTGAGCCCCCAAAAGTGGATTGTGAGATCCCACGTCGGTTAGAGAGGAGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAACAGACACGTTTTAAAATTGTGAGGCTGACAACGATATGTAATGGTCAAAGCAGATAATACTGTTAGCGGTGTGCTTGGACTGTTACAAATAGTATCAGAGTCAAATATCGGGCGATGTGCCAGCAAGGACGCTGAGCCCCCAAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACATTTTTATAAAGGTGTAGAAACCTCTCCCTAGCAGACGCGTTTTAAAACCGTGAGGCTAACGACGATACGTGACGGGCCAAAGCAAACAAGTAGACTTGGGCTGTTACACTTAGCTTAGCCATTCCTCGGATTCTCTATGCTCTGTTTTGCAGATTGACACTGAGTTTGTTGAAGTAATAGCTTTCAGGTAAAACCATGTGATTTTCTTCATTCATCTTGTCGAAACCGAGTCAACGAGATCTAACATCGTTCTCCTCCATTAATCCAGGCATGCTCACAACATAGCGTTTGAGAAGTCGGATTTGTTCTTCGTCTGCATGCTTAGACCCTTATCGACCCAGATAATCGTCGACGATTTCGAAATTCAAGCAGCAAAGGTAAATTTTCTAGAACTCAAAGAATAATCAATCCTATGCTGTTCTACATTGAAAGCTGAATTTGTGGTAATTCAGTGGATGCCTTTAGCTGAATTTGTGGAGCAATCCCATGTAAAAGAAGATGTGATGTTTAAGAAGATTATCGACATTTGCATTGCTCGACTCGATAAATATTATTGTGGCTTGAACGTTCATCAACTCGTCTCGAAGTTCGACGGTAAACTTTCGTCACTGTATTACAATATCGTCGACGGGGAGGATCTAAACTGTGCTGGAAACTGAAGGGAACACAACCTGGCCTGCTCATTGCCATTATGTTCATAGCTGATTTAGCAGAGTATATATCATTATGTTATTAGCACAATTAGGTGTGCTTTTTTTGTACATGGCTGATTATAAATAAACAAAAAGAACTGTTATTTGAGTTTCATAAATCTATTCCAAAGGGATTTCATGTGAATCTGCTCACGGGAGGCACGCGTTTAGACGTAGTCGAACCGGTTCAAGGAAACCAGCTCGACGAGTTCAATTGGACTAGTTTGACACATTTTGGTCAACTGGTTTTGTTTTTCTCAATTTTTGGAGTCGAGTTAAACCATACTTTTATTAGGGCAAAATTCGGAGAATTCGAGGGAAG

mRNA sequence

ATGGAGATGTCGTTGTTGGAGCCAAGAACAGCGGTTTCTTCCCCGTTTTCCAGCCTTAAGCACCAAGTTGAGCGGTTTTCTAGGTGTTCTTCTTGCAAAGGTAGATTTTTCAGGGCTTCTTATTCAAGAGTTCCAAACAAAGCATCTTGTAGTGGAGGTGTGAGTTCAATTAGCCAAGAAAAACTAGCAGCTGAAGCTTTTACTCATAAGATAAATGGAACAAATGGATTGAGTTCTAAGCTGTTTTCAAGAGATAGTAGATTGTTAGATGCTGCTGATGATCAATATGATGGAATTGTTATTGATCCAAATGGATTACCTTCGAATCCGATCGTCTTTTCGTCGAATCTTCGTTTCTCTCTGTCTCATTGGAAAAAGAAGGGAAAGAAGGGAGTTTGGCTTAAATTGCTAGTCGAACAGTCCGAGCTTGTTCCGATTGCCATAAAGGCAGGATTTCAATACCATCATGCTGAGCCGGGTTACTTGATGTTAACTTATTGGATACCCGATGGACCCTGCATGCTTCCTGCAAATGCTTCTCATCACGTCGGGGTCGGAGGATTCGTCATCAATGACAAAAACGAGGTCCTGGTTGTGCAAGAAAAATACTGTTCTCCACAATTCACTAATTTTTGGAAGATACCAACCGGTTTCATCGTTGAGAAGGAAGAGATCTATACAGGAGTTGCTAGAGAAGTTAAGGAGGAAACTGGTATTGACACTGAGTTTGTTGAAGTAATAGCTTTCAGGCATGCTCACAACATAGCGTTTGAGAAGTCGGATTTGTTCTTCGTCTGCATGCTTAGACCCTTATCGACCCAGATAATCGTCGACGATTTCGAAATTCAAGCAGCAAAGTGGATGCCTTTAGCTGAATTTGTGGAGCAATCCCATGTAAAAGAAGATGTGATGTTTAAGAAGATTATCGACATTTGCATTGCTCGACTCGATAAATATTATTGTGGCTTGAACGTTCATCAACTCGTCTCGAAGTTCGACGGTAAACTTTCGTCACTGTATTACAATATCGTCGACGGGGAGGATCTAAACTGTGCTGGAAACTGAAGGGAACACAACCTGGCCTGCTCATTGCCATTATGTTCATAGCTGATTTAGCAGAGTATATATCATTATGTTATTAGCACAATTAGGTGTGCTTTTTTTGTACATGGCTGATTATAAATAAACAAAAAGAACTGTTATTTGAGTTTCATAAATCTATTCCAAAGGGATTTCATGTGAATCTGCTCACGGGAGGCACGCGTTTAGACGTAGTCGAACCGGTTCAAGGAAACCAGCTCGACGAGTTCAATTGGACTAGTTTGACACATTTTGGTCAACTGGTTTTGTTTTTCTCAATTTTTGGAGTCGAGTTAAACCATACTTTTATTAGGGCAAAATTCGGAGAATTCGAGGGAAG

Coding sequence (CDS)

ATGGAGATGTCGTTGTTGGAGCCAAGAACAGCGGTTTCTTCCCCGTTTTCCAGCCTTAAGCACCAAGTTGAGCGGTTTTCTAGGTGTTCTTCTTGCAAAGGTAGATTTTTCAGGGCTTCTTATTCAAGAGTTCCAAACAAAGCATCTTGTAGTGGAGGTGTGAGTTCAATTAGCCAAGAAAAACTAGCAGCTGAAGCTTTTACTCATAAGATAAATGGAACAAATGGATTGAGTTCTAAGCTGTTTTCAAGAGATAGTAGATTGTTAGATGCTGCTGATGATCAATATGATGGAATTGTTATTGATCCAAATGGATTACCTTCGAATCCGATCGTCTTTTCGTCGAATCTTCGTTTCTCTCTGTCTCATTGGAAAAAGAAGGGAAAGAAGGGAGTTTGGCTTAAATTGCTAGTCGAACAGTCCGAGCTTGTTCCGATTGCCATAAAGGCAGGATTTCAATACCATCATGCTGAGCCGGGTTACTTGATGTTAACTTATTGGATACCCGATGGACCCTGCATGCTTCCTGCAAATGCTTCTCATCACGTCGGGGTCGGAGGATTCGTCATCAATGACAAAAACGAGGTCCTGGTTGTGCAAGAAAAATACTGTTCTCCACAATTCACTAATTTTTGGAAGATACCAACCGGTTTCATCGTTGAGAAGGAAGAGATCTATACAGGAGTTGCTAGAGAAGTTAAGGAGGAAACTGGTATTGACACTGAGTTTGTTGAAGTAATAGCTTTCAGGCATGCTCACAACATAGCGTTTGAGAAGTCGGATTTGTTCTTCGTCTGCATGCTTAGACCCTTATCGACCCAGATAATCGTCGACGATTTCGAAATTCAAGCAGCAAAGTGGATGCCTTTAGCTGAATTTGTGGAGCAATCCCATGTAAAAGAAGATGTGATGTTTAAGAAGATTATCGACATTTGCATTGCTCGACTCGATAAATATTATTGTGGCTTGAACGTTCATCAACTCGTCTCGAAGTTCGACGGTAAACTTTCGTCACTGTATTACAATATCGTCGACGGGGAGGATCTAAACTGTGCTGGAAACTGA

Protein sequence

MEMSLLEPRTAVSSPFSSLKHQVERFSRCSSCKGRFFRASYSRVPNKASCSGGVSSISQEKLAAEAFTHKINGTNGLSSKLFSRDSRLLDAADDQYDGIVIDPNGLPSNPIVFSSNLRFSLSHWKKKGKKGVWLKLLVEQSELVPIAIKAGFQYHHAEPGYLMLTYWIPDGPCMLPANASHHVGVGGFVINDKNEVLVVQEKYCSPQFTNFWKIPTGFIVEKEEIYTGVAREVKEETGIDTEFVEVIAFRHAHNIAFEKSDLFFVCMLRPLSTQIIVDDFEIQAAKWMPLAEFVEQSHVKEDVMFKKIIDICIARLDKYYCGLNVHQLVSKFDGKLSSLYYNIVDGEDLNCAGN

Homology

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BLAST of CmaCh16G011180 vs. ExPASy Swiss-Prot
Match: Q8L7W2 (Nudix hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=NUDT8 PE=2 SV=2)

HSP 1 Score: 405.2 bits (1040), Expect = 7.5e-112
Identity = 194/283 (68.55%), Postives = 228/283 (80.57%), Query Frame = 0


Query: 69  HKINGTNGLSSKLFS---RDSRLLDAADDQYDGIVIDPNGLPSNPIVFSSNLRFSLSHWK 128
           +K+NG N  S  L S   ++  LLDA DD+Y G+++D   LPSNP  F+S LR SLS W+
Sbjct: 73  YKMNGVNLKSRTLMSSAVKERSLLDAYDDEYGGVIVDHGKLPSNPYAFASMLRASLSDWR 132

Query: 129 KKGKKGVWLKLLVEQSELVPIAIKAGFQYHHAEPGYLMLTYWIP-DGPCMLPANASHHVG 188
           +KGKKGVWLKL VEQSELVPIAIK GF+YHHAE GY+MLTYWIP + P MLPANASH VG
Sbjct: 133 RKGKKGVWLKLPVEQSELVPIAIKEGFEYHHAEKGYVMLTYWIPEEEPSMLPANASHQVG 192

Query: 189 VGGFVINDKNEVLVVQEKYCSPQFTNFWKIPTGFIVEKEEIYTGVAREVKEETGIDTEFV 248
           VGGFV+N   EVLVVQEKYC+P  T  WK+PTGFI E EEI++G  REVKEETG+DTEF 
Sbjct: 193 VGGFVLNQHKEVLVVQEKYCAPSITGLWKLPTGFINESEEIFSGAVREVKEETGVDTEFS 252

Query: 249 EVIAFRHAHNIAFEKSDLFFVCMLRPLSTQIIVDDFEIQAAKWMPLAEFVEQSHVKEDVM 308
           EVIAFRHAHN+AFEKSDLFF+CMLRPLS +II+D  EI+AAKWMPLAEFVEQ  ++ D M
Sbjct: 253 EVIAFRHAHNVAFEKSDLFFICMLRPLSDKIIIDALEIKAAKWMPLAEFVEQPMIRGDKM 312

Query: 309 FKKIIDICIARLDKYYCGLNVHQLVSKFDGKLSSLYYNIVDGE 348
           FK++I+IC ARL   YCGL+ H+LVS FDGK SSLYYN+VD +
Sbjct: 313 FKRVIEICEARLSHRYCGLSPHRLVSTFDGKPSSLYYNVVDDD 355

[Close]

BLAST of CmaCh16G011180 vs. ExPASy Swiss-Prot
Match: Q94B74 (Nudix hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=NUDT2 PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.9e-62
Identity = 125/258 (48.45%), Postives = 161/258 (62.40%), Query Frame = 0


Query: 88  LLDAADDQYDGIVIDPNGLPSNPIVFSSNLRFSLSHWKKKGKKGVWLKLLVEQSELVPIA 147
           LL +  D+Y G++ +    P +P +FS+ LR SLS W  +GKKGVW+KL  +   L   A
Sbjct: 19  LLPSVQDKYGGVMTEMTH-PMDPSLFSTLLRSSLSTWTLQGKKGVWIKLPKQLIGLAETA 78

Query: 148 IKAGFQYHHAEPGYLMLTYWIPDGPCMLPANASHHVGVGGFVINDKNEVLVVQEKYCSPQ 207
           +K GF +HHAE  YLML YWIP     LPANASH VG+G FVIN   EVLVVQEK    Q
Sbjct: 79  VKEGFWFHHAEKDYLMLVYWIPKEDDTLPANASHRVGIGAFVINHNKEVLVVQEKTGRFQ 138

Query: 208 FTNFWKIPTGFIVEKEEIYTGVAREVKEETGIDTEFVEVIAFRHAHNIAFEKSDLFFVCM 267
               WK PTG + E E+I+ G  REVKEETG+DTEF +++AFR  H   F KSDLFFVCM
Sbjct: 139 GQGIWKFPTGVVNEGEDIHDGSVREVKEETGVDTEFDQILAFRQTHKAFFGKSDLFFVCM 198

Query: 268 LRPLSTQIIVDDFEIQAAKWMPLAEFVEQSHVKEDVMFKKIIDICIARLDKYYCGLNVHQ 327
           L+PLS +I   + EI+AA+WMP  E++ Q  V+   + + + DIC A+ +  Y G     
Sbjct: 199 LKPLSLEINAQESEIEAAQWMPWEEYINQPFVQNYELLRYMTDICSAKTNGDYEGFT--P 258

Query: 328 LVSKFDGKLSSLYYNIVD 346
           L      +  +LYYN  D
Sbjct: 259 LRVSAPDQQGNLYYNTRD 273

[Close]

BLAST of CmaCh16G011180 vs. ExPASy Swiss-Prot
Match: Q6NPD7 (Nudix hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=NUDT10 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.8e-60
Identity = 122/268 (45.52%), Postives = 158/268 (58.96%), Query Frame = 0


Query: 75  NGLSSKLFSRDSRLLDAADDQYDGIVIDPNGLPSNPIVFSSNLRFSLSHWKKKGKKGVWL 134
           NG+  K+F     +L   DD Y G++++    P +   F + LR S   W+ +GKKGVWL
Sbjct: 10  NGVEHKIF----EVLPFVDDDYGGVIVEMK-TPMDTKNFVAALRDSFEQWRLQGKKGVWL 69

Query: 135 KLLVEQSELVPIAIKAGFQYHHAEPGYLMLTYWIPDGPCMLPANASHHVGVGGFVINDKN 194
            L +    LV  A+K GF+YHHAEP YLML YWIP+    +P NASH V VG  V+N   
Sbjct: 70  NLPLSHVNLVEPAVKEGFRYHHAEPTYLMLVYWIPEAESTIPLNASHRVRVGAVVLNHNK 129

Query: 195 EVLVVQEKYCSPQFTNFWKIPTGFIVEKEEIYTGVAREVKEETGIDTEFVEVIAFRHAHN 254
           E     EKY S   +  WKIPTG + E EEI+    REVKEETGIDTEF+E++AF   H 
Sbjct: 130 E-----EKYGSLCGSGIWKIPTGVVDEGEEIFAAAIREVKEETGIDTEFLEILAFCQTHE 189

Query: 255 IAFEKSDLFFVCMLRPLSTQIIVDDFEIQAAKWMPLAEFVEQSHVKEDVMFKKIIDICIA 314
             F KSDLFFVC+LRP S  I   D EI+AA+WM   +   Q    ++ +FK I  IC  
Sbjct: 190 SFFAKSDLFFVCLLRPTSFDIQKQDLEIEAAQWMRFEDSASQPITHKNDLFKDIHHICSM 249

Query: 315 RLDKYYCGLNVHQLVSKFDGKLSSLYYN 343
           +++K Y G +   + + FD KL  LY N
Sbjct: 250 KMEKSYSGFSKKPITTFFDDKLGYLYLN 267

[Close]

BLAST of CmaCh16G011180 vs. ExPASy Swiss-Prot
Match: Q9SU14 (Nudix hydrolase 7 OS=Arabidopsis thaliana OX=3702 GN=NUDT7 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 5.1e-60
Identity = 123/257 (47.86%), Postives = 168/257 (65.37%), Query Frame = 0


Query: 88  LLDAADDQYDGIVIDPNGLPSNPIVFSSNLRFSLSHWKKKGKKGVWLKLLVEQSELVPIA 147
           LL+   D YDG+ +     P +  VF+ +LR SLSHW+++GKKG+W+KL +  + LV  A
Sbjct: 10  LLEGETDNYDGVTVTMVE-PMDSEVFTESLRASLSHWREEGKKGIWIKLPLGLANLVEAA 69

Query: 148 IKAGFQYHHAEPGYLMLTYWIPDGPCMLPANASHHVGVGGFVIN-DKNEVLVVQEKYCSP 207
           +  GF+YHHAEP YLML  WI + P  +PANASH VG G  VIN +  EVLVVQE+    
Sbjct: 70  VSEGFRYHHAEPEYLMLVSWISETPDTIPANASHVVGAGALVINKNTKEVLVVQERSGFF 129

Query: 208 QFTNFWKIPTGFIVEKEEIYTGVAREVKEETGIDTEFVEVIAFRHAHN-IAFEKSDLFFV 267
           +  N WK+PTG I E E+I+TGVAREV+EETGI  +FVEV+AFR +H  I  +K+D+FF+
Sbjct: 130 KDKNVWKLPTGVINEGEDIWTGVAREVEEETGIIADFVEVLAFRQSHKAILKKKTDMFFL 189

Query: 268 CMLRPLSTQIIVDDFEIQAAKWMPLAEFVEQSHVKEDVMFKKIIDICIARLDKYYCGLNV 327
           C+L P S  I     EI  AKWMP+ E+V+Q   K++ MFK + +IC  + ++ Y G  +
Sbjct: 190 CVLSPRSYDITEQKSEILQAKWMPIQEYVDQPWNKKNEMFKFMANICQKKCEEEYLGFAI 249

Query: 328 HQLVSKFDGKLSSLYYN 343
               +   GK S +Y N
Sbjct: 250 VPTTTS-SGKESFIYCN 264

[Close]

BLAST of CmaCh16G011180 vs. ExPASy Swiss-Prot
Match: Q9SJC6 (Nudix hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=NUDT5 PE=2 SV=3)

HSP 1 Score: 226.5 bits (576), Expect = 4.8e-58
Identity = 119/239 (49.79%), Postives = 154/239 (64.44%), Query Frame = 0


Query: 88  LLDAADDQYDGIVIDPNGLPSNPI-VFSSNLRFSLSHWKKKGKKGVWLKLLVEQSELVPI 147
           LLD  +D++ G V++   + S  I  F S L  SL  WK +GKKG+W+KL  E S LV  
Sbjct: 29  LLDGEEDRFGGTVVNLMEVESMTIGDFDSKLDVSLKAWKDQGKKGIWIKLPSELSSLVDT 88

Query: 148 AIKAGFQYHHAEPGYLMLTYWIPDGPCMLPANASHHVGVGGFVINDKNEVLVVQEKYCSP 207
           AIK GF YHHAE  Y+MLT+W+P+ P  LP NASH +G+G FV+N   E+LVVQE     
Sbjct: 89  AIKKGFTYHHAENEYVMLTFWLPEPPSTLPCNASHRIGIGAFVLNKNGEMLVVQENSGYF 148

Query: 208 QFTNFWKIPTGFIVEKEEIYTGVAREVKEETGIDTEFVEVIAFRHAHNIAFE-KSDLFFV 267
           +  N WK+PTG I E E I+ G  REVKEET ID EFVEV++F  +H   ++ K+D+FFV
Sbjct: 149 KDKNVWKVPTGTIKEGESIWAGAVREVKEETDIDAEFVEVLSFMESHQAVWQRKTDIFFV 208

Query: 268 CMLRPLSTQIIVDDFEIQAAKWMPLAEFVEQS-HVKE-DVMFKKIIDICIARLDKYYCG 323
           C L   + +I   D EI AAKWMP+ E+V Q  H KE + MFK I +IC+ R  + Y G
Sbjct: 209 CELEARTFEIQKQDSEIHAAKWMPVEEYVNQPYHNKEGNEMFKLIANICLKRSREKYTG 267

[Close]

BLAST of CmaCh16G011180 vs. TAIR 10
Match: AT5G47240.1 (nudix hydrolase homolog 8 )

HSP 1 Score: 405.2 bits (1040), Expect = 5.3e-113
Identity = 194/283 (68.55%), Postives = 228/283 (80.57%), Query Frame = 0


Query: 69  HKINGTNGLSSKLFS---RDSRLLDAADDQYDGIVIDPNGLPSNPIVFSSNLRFSLSHWK 128
           +K+NG N  S  L S   ++  LLDA DD+Y G+++D   LPSNP  F+S LR SLS W+
Sbjct: 73  YKMNGVNLKSRTLMSSAVKERSLLDAYDDEYGGVIVDHGKLPSNPYAFASMLRASLSDWR 132

Query: 129 KKGKKGVWLKLLVEQSELVPIAIKAGFQYHHAEPGYLMLTYWIP-DGPCMLPANASHHVG 188
           +KGKKGVWLKL VEQSELVPIAIK GF+YHHAE GY+MLTYWIP + P MLPANASH VG
Sbjct: 133 RKGKKGVWLKLPVEQSELVPIAIKEGFEYHHAEKGYVMLTYWIPEEEPSMLPANASHQVG 192

Query: 189 VGGFVINDKNEVLVVQEKYCSPQFTNFWKIPTGFIVEKEEIYTGVAREVKEETGIDTEFV 248
           VGGFV+N   EVLVVQEKYC+P  T  WK+PTGFI E EEI++G  REVKEETG+DTEF 
Sbjct: 193 VGGFVLNQHKEVLVVQEKYCAPSITGLWKLPTGFINESEEIFSGAVREVKEETGVDTEFS 252

Query: 249 EVIAFRHAHNIAFEKSDLFFVCMLRPLSTQIIVDDFEIQAAKWMPLAEFVEQSHVKEDVM 308
           EVIAFRHAHN+AFEKSDLFF+CMLRPLS +II+D  EI+AAKWMPLAEFVEQ  ++ D M
Sbjct: 253 EVIAFRHAHNVAFEKSDLFFICMLRPLSDKIIIDALEIKAAKWMPLAEFVEQPMIRGDKM 312

Query: 309 FKKIIDICIARLDKYYCGLNVHQLVSKFDGKLSSLYYNIVDGE 348
           FK++I+IC ARL   YCGL+ H+LVS FDGK SSLYYN+VD +
Sbjct: 313 FKRVIEICEARLSHRYCGLSPHRLVSTFDGKPSSLYYNVVDDD 355

[Close]

BLAST of CmaCh16G011180 vs. TAIR 10
Match: AT5G47650.1 (nudix hydrolase homolog 2 )

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-63
Identity = 125/258 (48.45%), Postives = 161/258 (62.40%), Query Frame = 0


Query: 88  LLDAADDQYDGIVIDPNGLPSNPIVFSSNLRFSLSHWKKKGKKGVWLKLLVEQSELVPIA 147
           LL +  D+Y G++ +    P +P +FS+ LR SLS W  +GKKGVW+KL  +   L   A
Sbjct: 19  LLPSVQDKYGGVMTEMTH-PMDPSLFSTLLRSSLSTWTLQGKKGVWIKLPKQLIGLAETA 78

Query: 148 IKAGFQYHHAEPGYLMLTYWIPDGPCMLPANASHHVGVGGFVINDKNEVLVVQEKYCSPQ 207
           +K GF +HHAE  YLML YWIP     LPANASH VG+G FVIN   EVLVVQEK    Q
Sbjct: 79  VKEGFWFHHAEKDYLMLVYWIPKEDDTLPANASHRVGIGAFVINHNKEVLVVQEKTGRFQ 138

Query: 208 FTNFWKIPTGFIVEKEEIYTGVAREVKEETGIDTEFVEVIAFRHAHNIAFEKSDLFFVCM 267
               WK PTG + E E+I+ G  REVKEETG+DTEF +++AFR  H   F KSDLFFVCM
Sbjct: 139 GQGIWKFPTGVVNEGEDIHDGSVREVKEETGVDTEFDQILAFRQTHKAFFGKSDLFFVCM 198

Query: 268 LRPLSTQIIVDDFEIQAAKWMPLAEFVEQSHVKEDVMFKKIIDICIARLDKYYCGLNVHQ 327
           L+PLS +I   + EI+AA+WMP  E++ Q  V+   + + + DIC A+ +  Y G     
Sbjct: 199 LKPLSLEINAQESEIEAAQWMPWEEYINQPFVQNYELLRYMTDICSAKTNGDYEGFT--P 258

Query: 328 LVSKFDGKLSSLYYNIVD 346
           L      +  +LYYN  D
Sbjct: 259 LRVSAPDQQGNLYYNTRD 273

[Close]

BLAST of CmaCh16G011180 vs. TAIR 10
Match: AT4G25434.1 (nudix hydrolase homolog 10 )

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-61
Identity = 122/268 (45.52%), Postives = 158/268 (58.96%), Query Frame = 0


Query: 75  NGLSSKLFSRDSRLLDAADDQYDGIVIDPNGLPSNPIVFSSNLRFSLSHWKKKGKKGVWL 134
           NG+  K+F     +L   DD Y G++++    P +   F + LR S   W+ +GKKGVWL
Sbjct: 10  NGVEHKIF----EVLPFVDDDYGGVIVEMK-TPMDTKNFVAALRDSFEQWRLQGKKGVWL 69

Query: 135 KLLVEQSELVPIAIKAGFQYHHAEPGYLMLTYWIPDGPCMLPANASHHVGVGGFVINDKN 194
            L +    LV  A+K GF+YHHAEP YLML YWIP+    +P NASH V VG  V+N   
Sbjct: 70  NLPLSHVNLVEPAVKEGFRYHHAEPTYLMLVYWIPEAESTIPLNASHRVRVGAVVLNHNK 129

Query: 195 EVLVVQEKYCSPQFTNFWKIPTGFIVEKEEIYTGVAREVKEETGIDTEFVEVIAFRHAHN 254
           E     EKY S   +  WKIPTG + E EEI+    REVKEETGIDTEF+E++AF   H 
Sbjct: 130 E-----EKYGSLCGSGIWKIPTGVVDEGEEIFAAAIREVKEETGIDTEFLEILAFCQTHE 189

Query: 255 IAFEKSDLFFVCMLRPLSTQIIVDDFEIQAAKWMPLAEFVEQSHVKEDVMFKKIIDICIA 314
             F KSDLFFVC+LRP S  I   D EI+AA+WM   +   Q    ++ +FK I  IC  
Sbjct: 190 SFFAKSDLFFVCLLRPTSFDIQKQDLEIEAAQWMRFEDSASQPITHKNDLFKDIHHICSM 249

Query: 315 RLDKYYCGLNVHQLVSKFDGKLSSLYYN 343
           +++K Y G +   + + FD KL  LY N
Sbjct: 250 KMEKSYSGFSKKPITTFFDDKLGYLYLN 267

[Close]

BLAST of CmaCh16G011180 vs. TAIR 10
Match: AT4G12720.1 (MutT/nudix family protein )

HSP 1 Score: 233.0 bits (593), Expect = 3.6e-61
Identity = 123/257 (47.86%), Postives = 168/257 (65.37%), Query Frame = 0


Query: 88  LLDAADDQYDGIVIDPNGLPSNPIVFSSNLRFSLSHWKKKGKKGVWLKLLVEQSELVPIA 147
           LL+   D YDG+ +     P +  VF+ +LR SLSHW+++GKKG+W+KL +  + LV  A
Sbjct: 10  LLEGETDNYDGVTVTMVE-PMDSEVFTESLRASLSHWREEGKKGIWIKLPLGLANLVEAA 69

Query: 148 IKAGFQYHHAEPGYLMLTYWIPDGPCMLPANASHHVGVGGFVIN-DKNEVLVVQEKYCSP 207
           +  GF+YHHAEP YLML  WI + P  +PANASH VG G  VIN +  EVLVVQE+    
Sbjct: 70  VSEGFRYHHAEPEYLMLVSWISETPDTIPANASHVVGAGALVINKNTKEVLVVQERSGFF 129

Query: 208 QFTNFWKIPTGFIVEKEEIYTGVAREVKEETGIDTEFVEVIAFRHAHN-IAFEKSDLFFV 267
           +  N WK+PTG I E E+I+TGVAREV+EETGI  +FVEV+AFR +H  I  +K+D+FF+
Sbjct: 130 KDKNVWKLPTGVINEGEDIWTGVAREVEEETGIIADFVEVLAFRQSHKAILKKKTDMFFL 189

Query: 268 CMLRPLSTQIIVDDFEIQAAKWMPLAEFVEQSHVKEDVMFKKIIDICIARLDKYYCGLNV 327
           C+L P S  I     EI  AKWMP+ E+V+Q   K++ MFK + +IC  + ++ Y G  +
Sbjct: 190 CVLSPRSYDITEQKSEILQAKWMPIQEYVDQPWNKKNEMFKFMANICQKKCEEEYLGFAI 249

Query: 328 HQLVSKFDGKLSSLYYN 343
               +   GK S +Y N
Sbjct: 250 VPTTTS-SGKESFIYCN 264

[Close]

BLAST of CmaCh16G011180 vs. TAIR 10
Match: AT4G12720.2 (MutT/nudix family protein )

HSP 1 Score: 233.0 bits (593), Expect = 3.6e-61
Identity = 123/257 (47.86%), Postives = 168/257 (65.37%), Query Frame = 0


Query: 88  LLDAADDQYDGIVIDPNGLPSNPIVFSSNLRFSLSHWKKKGKKGVWLKLLVEQSELVPIA 147
           LL+   D YDG+ +     P +  VF+ +LR SLSHW+++GKKG+W+KL +  + LV  A
Sbjct: 10  LLEGETDNYDGVTVTMVE-PMDSEVFTESLRASLSHWREEGKKGIWIKLPLGLANLVEAA 69

Query: 148 IKAGFQYHHAEPGYLMLTYWIPDGPCMLPANASHHVGVGGFVIN-DKNEVLVVQEKYCSP 207
           +  GF+YHHAEP YLML  WI + P  +PANASH VG G  VIN +  EVLVVQE+    
Sbjct: 70  VSEGFRYHHAEPEYLMLVSWISETPDTIPANASHVVGAGALVINKNTKEVLVVQERSGFF 129

Query: 208 QFTNFWKIPTGFIVEKEEIYTGVAREVKEETGIDTEFVEVIAFRHAHN-IAFEKSDLFFV 267
           +  N WK+PTG I E E+I+TGVAREV+EETGI  +FVEV+AFR +H  I  +K+D+FF+
Sbjct: 130 KDKNVWKLPTGVINEGEDIWTGVAREVEEETGIIADFVEVLAFRQSHKAILKKKTDMFFL 189

Query: 268 CMLRPLSTQIIVDDFEIQAAKWMPLAEFVEQSHVKEDVMFKKIIDICIARLDKYYCGLNV 327
           C+L P S  I     EI  AKWMP+ E+V+Q   K++ MFK + +IC  + ++ Y G  +
Sbjct: 190 CVLSPRSYDITEQKSEILQAKWMPIQEYVDQPWNKKNEMFKFMANICQKKCEEEYLGFAI 249

Query: 328 HQLVSKFDGKLSSLYYN 343
               +   GK S +Y N
Sbjct: 250 VPTTTS-SGKESFIYCN 264

The following BLAST results are available for this feature:

BLAST of CmaCh16G011180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7W2	7.5e-112	68.55	Nudix hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=NUDT8 PE=2 SV=2	[more]
Q94B74	1.9e-62	48.45	Nudix hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=NUDT2 PE=1 SV=1	[more]
Q6NPD7	1.8e-60	45.52	Nudix hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=NUDT10 PE=1 SV=1	[more]
Q9SU14	5.1e-60	47.86	Nudix hydrolase 7 OS=Arabidopsis thaliana OX=3702 GN=NUDT7 PE=1 SV=1	[more]
Q9SJC6	4.8e-58	49.79	Nudix hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=NUDT5 PE=2 SV=3	[more]

BLAST of CmaCh16G011180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47240.1	5.3e-113	68.55	nudix hydrolase homolog 8	[more]
AT5G47650.1	1.3e-63	48.45	nudix hydrolase homolog 2	[more]
AT4G25434.1	1.2e-61	45.52	nudix hydrolase homolog 10	[more]
AT4G12720.1	3.6e-61	47.86	MutT/nudix family protein	[more]
AT4G12720.2	3.6e-61	47.86	MutT/nudix family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003293	Nudix hydrolase 6-like	PRINTS	PR01356	GFGPROTEIN	coord: 178..196 score: 40.35 coord: 140..158 score: 54.39 coord: 318..342 score: 20.0 coord: 266..290 score: 38.67 coord: 162..178 score: 45.1 coord: 238..261 score: 30.56
IPR003293	Nudix hydrolase 6-like	PANTHER	PTHR13994	NUDIX HYDROLASE RELATED	coord: 24..353
None	No IPR available	GENE3D	3.40.630.30		coord: 85..173 e-value: 2.5E-30 score: 106.1
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 182..320 e-value: 1.9E-32 score: 113.9
None	No IPR available	PANTHER	PTHR13994:SF41	NUDIX HYDROLASE 8-LIKE	coord: 24..353
None	No IPR available	CDD	cd04670	Nudix_Hydrolase_12	coord: 181..312 e-value: 3.60087E-63 score: 195.602
IPR040618	Pre-nudix hydrolase domain	PFAM	PF18290	Nudix_hydro	coord: 89..168 e-value: 1.8E-29 score: 101.6
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 181..299 e-value: 4.7E-19 score: 68.7
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 180..310 score: 15.853024
IPR020084	NUDIX hydrolase, conserved site	PROSITE	PS00893	NUDIX_BOX	coord: 217..238
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	55811	Nudix	coord: 148..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G011180.1	CmaCh16G011180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0047631	ADP-ribose diphosphatase activity
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0035529	NADH pyrophosphatase activity
molecular_function	GO:0016787	hydrolase activity