CmaCh16G011170 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G011170
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ethylene-responsive transcription factor 5
Location	Cma_Chr16: 8592398 .. 8593429 (+)
RNA-Seq Expression	CmaCh16G011170
Synteny	CmaCh16G011170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTTGTGAATCTGGAGGAAGCTGCTGCGTTGGAGAATATTAAGCTTCATCTTCTCGGCGAACTCTCTCCGTTGCCGAGGAATTTGGCTTCTGATGATAGCCTTTGCGTCACGTCGTCGGATCGTTCGGTGAGTTCCGATGCTTCAACGACGTCTAACTGTCCTCTTACAATCACTGATTACTTCGATCCGGATGATTTTTTCGAATTTTCCTCTGATTTAATCCAAGATGAGTCGTCGATTTTATCAAACGACGATTTCTTCGGAGTCGAGATGAAACCTAACGTCATCGATCTCACGATGCCTAAATCGGAGGAATTTCTCGAATTCGAGACGAAACCTAGTGTTTTTGAGGATTTGAGTTTGAGTTCGAGTTCTATGTACAGTAATAGTTCATTTGAAGTCGAATCGAAGACGAAATTGATCGGTCGTGTGACGAATTCGAATAGGAAACCATCGAATTTGAAAATCTCGCTTCCGAACAAGACTACGCAGTGGATTAATTTTGACGCGGCGGAGAAGAAGAATCCGGTTGTGGTGCAGAGGAGTAAAGATCTCGAGGCGGAGAAGAAAGTTCATTACAGAGGCGTTCGACAGAGGCCTTGGGGAAAGTTCGCGGCCGAGATTAGGGATCCGAATCGTCGTGGATCTAGAGTCTGGCTTGGAACTTTTGAGACGGCTATTGAAGCGGCGAGAGCGTACGATCGTGCTGCCTTTAAACTTCGAGGTTCCAAGGCGATTCTCAACTTTCCGCTGGAAGCTGCGAACTCTTACTACTCGGAGCCGATCGTCGCCGGGAAGCGGCGGCGGGAGGAGGAAGTAGAAGAGGTAGTCGAGGCGGTGCCGGTGAAGAAAGAGAAAACGGAGGAGATGAACTTCCCGGCCGCCGACGTCAGTTTCCTAAAGGATATGCCGCTAACGCCGTCGTCATGGTCGATGGTATGGGACGGGGAGTCGAAGGGACTTCTAAATATTCCGCCGTTATCGCCGTTATCGCCGTTCGGTTTTCCACAACTTATGGTTGTATAA

mRNA sequence

ATGGAACTTGTGAATCTGGAGGAAGCTGCTGCGTTGGAGAATATTAAGCTTCATCTTCTCGGCGAACTCTCTCCGTTGCCGAGGAATTTGGCTTCTGATGATAGCCTTTGCGTCACGTCGTCGGATCGTTCGGTGAGTTCCGATGCTTCAACGACGTCTAACTGTCCTCTTACAATCACTGATTACTTCGATCCGGATGATTTTTTCGAATTTTCCTCTGATTTAATCCAAGATGAGTCGTCGATTTTATCAAACGACGATTTCTTCGGAGTCGAGATGAAACCTAACGTCATCGATCTCACGATGCCTAAATCGGAGGAATTTCTCGAATTCGAGACGAAACCTAGTGTTTTTGAGGATTTGAGTTTGAGTTCGAGTTCTATGTACAGTAATAGTTCATTTGAAGTCGAATCGAAGACGAAATTGATCGGTCGTGTGACGAATTCGAATAGGAAACCATCGAATTTGAAAATCTCGCTTCCGAACAAGACTACGCAGTGGATTAATTTTGACGCGGCGGAGAAGAAGAATCCGGTTGTGGTGCAGAGGAGTAAAGATCTCGAGGCGGAGAAGAAAGTTCATTACAGAGGCGTTCGACAGAGGCCTTGGGGAAAGTTCGCGGCCGAGATTAGGGATCCGAATCGTCGTGGATCTAGAGTCTGGCTTGGAACTTTTGAGACGGCTATTGAAGCGGCGAGAGCGTACGATCGTGCTGCCTTTAAACTTCGAGGTTCCAAGGCGATTCTCAACTTTCCGCTGGAAGCTGCGAACTCTTACTACTCGGAGCCGATCGTCGCCGGGAAGCGGCGGCGGGAGGAGGAAGTAGAAGAGGTAGTCGAGGCGGTGCCGGTGAAGAAAGAGAAAACGGAGGAGATGAACTTCCCGGCCGCCGACGTCAGTTTCCTAAAGGATATGCCGCTAACGCCGTCGTCATGGTCGATGGTATGGGACGGGGAGTCGAAGGGACTTCTAAATATTCCGCCGTTATCGCCGTTATCGCCGTTCGGTTTTCCACAACTTATGGTTGTATAA

Coding sequence (CDS)

ATGGAACTTGTGAATCTGGAGGAAGCTGCTGCGTTGGAGAATATTAAGCTTCATCTTCTCGGCGAACTCTCTCCGTTGCCGAGGAATTTGGCTTCTGATGATAGCCTTTGCGTCACGTCGTCGGATCGTTCGGTGAGTTCCGATGCTTCAACGACGTCTAACTGTCCTCTTACAATCACTGATTACTTCGATCCGGATGATTTTTTCGAATTTTCCTCTGATTTAATCCAAGATGAGTCGTCGATTTTATCAAACGACGATTTCTTCGGAGTCGAGATGAAACCTAACGTCATCGATCTCACGATGCCTAAATCGGAGGAATTTCTCGAATTCGAGACGAAACCTAGTGTTTTTGAGGATTTGAGTTTGAGTTCGAGTTCTATGTACAGTAATAGTTCATTTGAAGTCGAATCGAAGACGAAATTGATCGGTCGTGTGACGAATTCGAATAGGAAACCATCGAATTTGAAAATCTCGCTTCCGAACAAGACTACGCAGTGGATTAATTTTGACGCGGCGGAGAAGAAGAATCCGGTTGTGGTGCAGAGGAGTAAAGATCTCGAGGCGGAGAAGAAAGTTCATTACAGAGGCGTTCGACAGAGGCCTTGGGGAAAGTTCGCGGCCGAGATTAGGGATCCGAATCGTCGTGGATCTAGAGTCTGGCTTGGAACTTTTGAGACGGCTATTGAAGCGGCGAGAGCGTACGATCGTGCTGCCTTTAAACTTCGAGGTTCCAAGGCGATTCTCAACTTTCCGCTGGAAGCTGCGAACTCTTACTACTCGGAGCCGATCGTCGCCGGGAAGCGGCGGCGGGAGGAGGAAGTAGAAGAGGTAGTCGAGGCGGTGCCGGTGAAGAAAGAGAAAACGGAGGAGATGAACTTCCCGGCCGCCGACGTCAGTTTCCTAAAGGATATGCCGCTAACGCCGTCGTCATGGTCGATGGTATGGGACGGGGAGTCGAAGGGACTTCTAAATATTCCGCCGTTATCGCCGTTATCGCCGTTCGGTTTTCCACAACTTATGGTTGTATAA

Protein sequence

MELVNLEEAAALENIKLHLLGELSPLPRNLASDDSLCVTSSDRSVSSDASTTSNCPLTITDYFDPDDFFEFSSDLIQDESSILSNDDFFGVEMKPNVIDLTMPKSEEFLEFETKPSVFEDLSLSSSSMYSNSSFEVESKTKLIGRVTNSNRKPSNLKISLPNKTTQWINFDAAEKKNPVVVQRSKDLEAEKKVHYRGVRQRPWGKFAAEIRDPNRRGSRVWLGTFETAIEAARAYDRAAFKLRGSKAILNFPLEAANSYYSEPIVAGKRRREEEVEEVVEAVPVKKEKTEEMNFPAADVSFLKDMPLTPSSWSMVWDGESKGLLNIPPLSPLSPFGFPQLMVV

Homology

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BLAST of CmaCh16G011170 vs. ExPASy Swiss-Prot
Match: O80341 (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ERF5 PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.7e-47
Identity = 153/343 (44.61%), Postives = 193/343 (56.27%), Query Frame = 0


Query: 8   EAAALENIKLHLLGELSPLPRNLASDDSLCVTSSDRSVSSDASTTSNCPLTITDYFDPDD 67
           E +AL  I+ HLL E SP    +A+D  +   SS  + SS  S                 
Sbjct: 6   EVSALWFIEKHLLDEASP----VATDPWMKHESSSATESSSDS----------------- 65

Query: 68  FFEFSSDLIQDESSILSNDDFFGVEMKPNVIDLTMPKSEEFL----EFETKPSVFEDLSL 127
               SS +    SS  +  DF     KP +IDL  P+S EFL    EF+++ SV  D   
Sbjct: 66  ----SSIIFGSSSSSFAPIDFSESVCKPEIIDLDTPRSMEFLSIPFEFDSEVSV-SDFDF 125

Query: 128 SSSSMYSNSSFEVESKTKLIGRVTNSNRKPSNLKISLPNKTTQWINFDAAEKKNPVVVQR 187
             S+   N  FE E K+++        RKP  LKISLP K T+WI F AAE   P V   
Sbjct: 126 KPSNQNQN-QFEPELKSQI--------RKPP-LKISLPAK-TEWIQF-AAENTKPEV--- 185

Query: 188 SKDLEAEKKVHYRGVRQRPWGKFAAEIRDPNRRGSRVWLGTFETAIEAARAYDRAAFKLR 247
           +K +  E+K HYRGVRQRPWGKFAAEIRDPN+RGSRVWLGTF+TAIEAARAYD AAF+LR
Sbjct: 186 TKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLR 245

Query: 248 GSKAILNFPLEAANSYYSEPIVAGKRRREEEVEEVVEAVPVKKEKTEEMNFPAADVSFLK 307
           GSKAILNFPLE     +      G+++R+ + +E V  V  K  KTE+    + DV+  +
Sbjct: 246 GSKAILNFPLEVGK--WKPRADEGEKKRKRDDDEKVTVVE-KVLKTEQ----SVDVNGGE 300

Query: 308 DMPLTPSSWSMVWDGESKGLLNIPPLSPLS---PFGFPQLMVV 344
             P   S+ + + D +  G LN P LSPLS   PFG+ QL VV
Sbjct: 306 TFPFVTSNLTELCDWDLTGFLNFPLLSPLSPHPPFGYSQLTVV 300

[Close]

BLAST of CmaCh16G011170 vs. ExPASy Swiss-Prot
Match: Q40478 (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.3e-46
Identity = 121/236 (51.27%), Postives = 156/236 (66.10%), Query Frame = 0


Query: 122 SLSSSSMYSNS-----SFEVESKTKL-IGRVTNSNRKPSNLKISLPNKTTQWINFDAAEK 181
           +L  SS ++NS     SFE E+K  +   R+++++ K ++ K   P+     +N  A   
Sbjct: 73  NLDISSFFNNSKTEFDSFEFETKPNVSAARISSNSPKQTSFKERKPS-----LNI-AIPM 132

Query: 182 KNPVVVQRSKDLEAEKKVHYRGVRQRPWGKFAAEIRDPNRRGSRVWLGTFETAIEAARAY 241
           K   VVQ+ + +  EKK HYRGVRQRPWGKFAAEIRDPNR+G+RVWLGTF+TAIEAA+AY
Sbjct: 133 KQQEVVQKVEVVPTEKK-HYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAY 192

Query: 242 DRAAFKLRGSKAILNFPLEAAN-----SYYSEPIVAG-KRRREEEVEEVVEAVPVKKEKT 301
           DRAAFKLRGSKAI+NFPLE AN     +   +P  +G KR RE E EE+V    +KKE  
Sbjct: 193 DRAAFKLRGSKAIVNFPLEVANFKQQDNEILQPANSGRKRMRETENEEIV----IKKEVK 252

Query: 302 EEMNFPAADVSFLKDMPLTPSSWSMVWDGE-SKGLLNIPPLSPLSP-FGFPQLMVV 344
            E   PAA        PLTPSSWS +W+GE  KG+  +PPLSPLSP   + QL+++
Sbjct: 253 REERVPAAAA------PLTPSSWSAIWEGEDGKGIFEVPPLSPLSPHMAYSQLVMI 291

[Close]

BLAST of CmaCh16G011170 vs. ExPASy Swiss-Prot
Match: Q8VZ91 (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=ERF6 PE=1 SV=2)

HSP 1 Score: 169.5 bits (428), Expect = 6.7e-41
Identity = 146/343 (42.57%), Postives = 179/343 (52.19%), Query Frame = 0


Query: 8   EAAALENIKLHLLGELSPLPRNLASDDSLCVTSSDRSVSSDASTTSNCPLTITDYFDPDD 67
           E +AL  IK +LL ELSPLP                       TT+     + D+   D 
Sbjct: 6   EVSALFLIKKYLLDELSPLP-----------------------TTATTNRWMNDFTSFDQ 65

Query: 68  F-FEFSSDLIQDESSILSNDDFFGVEMKPNVIDLTMPKSEEFLEFETKPSVFEDLSLSSS 127
             FEFS                   E KP +IDL  PK E F +F+ K  +  +      
Sbjct: 66  TGFEFSE-----------------FETKPEIIDLVTPKPEIF-DFDVKSEIPSE------ 125

Query: 128 SMYSNSSFEVESKTKLIGRVTNSNRKPSNLKISLPNKTTQWINFDAAEKKNPVVVQRSKD 187
              SN SF  +S    +     SNRKP  LKI+ PN+ T+WI F     K  + V     
Sbjct: 126 ---SNDSFTFQSNPPRV--TVQSNRKPP-LKIAPPNR-TKWIQFATGNPKPELPV---PV 185

Query: 188 LEAEKKVHYRGVRQRPWGKFAAEIRDPNRRGSRVWLGTFETAIEAARAYDRAAFKLRGSK 247
           + AE+K HYRGVR RPWGKFAAEIRDP RRG+RVWLGTFETAIEAARAYD+ AF+LRGSK
Sbjct: 186 VAAEEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSK 245

Query: 248 AILNFPLEAANSYYSEPIVAG---KRRREEEVEEVVEAVPVKKEKTEEMNFPAADVSFLK 307
           AILNFPLE            G   KR+R+ E EEV   V  K  KTEE    + DVS  +
Sbjct: 246 AILNFPLEVDKWNPRAEDGRGLYNKRKRDGEEEEV--TVVEKVLKTEE----SYDVSGGE 282

Query: 308 DMPLTPSSWSMVWDGESKGLLNIPPLSPLS---PFGFPQLMVV 344
           ++    S  + + D +    L++P LSPLS   PFG+PQL VV
Sbjct: 306 NV---ESGLTAIDDWDLTEFLSMPLLSPLSPHPPFGYPQLTVV 282

[Close]

BLAST of CmaCh16G011170 vs. ExPASy Swiss-Prot
Match: Q9LW48 (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris OX=4096 GN=ERF5 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-40
Identity = 110/229 (48.03%), Postives = 144/229 (62.88%), Query Frame = 0


Query: 122 SLSSSSMYSNSSFEVESKTKLIGRVTN-SNRKPSNLKISLPNKTTQWINFDAAEKKNPVV 181
           +L  S+ ++NS  E +S     G + N S  + S+LK +   +    +N     K+   V
Sbjct: 69  NLEVSTFFNNSKTEFDSFE--FGTIPNVSAARSSSLKQTSFKERKPSLNIAIPVKQE--V 128

Query: 182 VQRSKDLEAEKKVHYRGVRQRPWGKFAAEIRDPNRRGSRVWLGTFETAIEAARAYDRAAF 241
           VQ+ +    EKK HYRGVRQRPWGKFAAEIRDPNR+G+RVWLGTF+TAIEAA+AYDRAA+
Sbjct: 129 VQKVELAPTEKK-HYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAY 188

Query: 242 KLRGSKAILNFPLEAAN---SYYSE--PIVAGKRRREEEVEEVVEAVPVKKEKTEEMNFP 301
           KLRGSKAI+NFPLE AN    + +E  P+V   R+R  E     + V  K+ K EE   P
Sbjct: 189 KLRGSKAIVNFPLEVANFKQEFNNEIRPLVNSSRKRVRETVNEEQLVINKEMKIEEERVP 248

Query: 302 AADVSFLKDMPLTPSSWSMVWD-GESKGLLNIPPLSPLSPFGFPQLMVV 344
            A        PLTPSSWS +WD G+ KG+  +PPLSP     + QL+++
Sbjct: 249 TA--------PLTPSSWSAIWDSGDGKGIFEVPPLSPFG--AYSQLVMI 282

[Close]

BLAST of CmaCh16G011170 vs. ExPASy Swiss-Prot
Match: Q9FKG1 (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana OX=3702 GN=ERF104 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.3e-33
Identity = 93/227 (40.97%), Postives = 130/227 (57.27%), Query Frame = 0


Query: 118 FEDLSLSSSSMYSNSSFEVESKTKLIGRVTNSNRKPSNL----KISLPNKTTQWINFDAA 177
           F  +     S+++N      S+T     +TN + KP++     K  LPN +         
Sbjct: 21  FVSMETDHPSLFTNQLHNFHSETG-PRTITNQSPKPNSTLNQRKPPLPNLSVSRTVSTKT 80

Query: 178 EKKNPVVVQRSKDLEAEKKVHYRGVRQRPWGKFAAEIRDPNRRGSRVWLGTFETAIEAAR 237
           EK+             E++ HYRGVR+RPWGK+AAEIRDPN++G R+WLGT++TA+EA R
Sbjct: 81  EKE-------------EEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGR 140

Query: 238 AYDRAAFKLRGSKAILNFPLE---AANSYYSEPIVA-GKRRREE-EVEEVVEAVPVKKEK 297
           AYD+AAF+LRG KAILNFPL+    + +   E ++  GKR+R++    E  +A  VK E+
Sbjct: 141 AYDQAAFQLRGRKAILNFPLDVRVTSETCSGEGVIGLGKRKRDKGSPPEEEKAARVKVEE 200

Query: 298 TEEMNFPAADVSFLKDMPLTPSSWSMVWD-GESKGLLNIPPLSPLSP 335
            E       +      +PLTPSSW   WD G   G+ +IPPLSP SP
Sbjct: 201 EESNTSETTEAEVEPVVPLTPSSWMGFWDVGAGDGIFSIPPLSPTSP 233

[Close]

BLAST of CmaCh16G011170 vs. TAIR 10
Match: AT5G47230.1 (ethylene responsive element binding factor 5 )

HSP 1 Score: 190.3 bits (482), Expect = 2.6e-48
Identity = 153/343 (44.61%), Postives = 193/343 (56.27%), Query Frame = 0


Query: 8   EAAALENIKLHLLGELSPLPRNLASDDSLCVTSSDRSVSSDASTTSNCPLTITDYFDPDD 67
           E +AL  I+ HLL E SP    +A+D  +   SS  + SS  S                 
Sbjct: 6   EVSALWFIEKHLLDEASP----VATDPWMKHESSSATESSSDS----------------- 65

Query: 68  FFEFSSDLIQDESSILSNDDFFGVEMKPNVIDLTMPKSEEFL----EFETKPSVFEDLSL 127
               SS +    SS  +  DF     KP +IDL  P+S EFL    EF+++ SV  D   
Sbjct: 66  ----SSIIFGSSSSSFAPIDFSESVCKPEIIDLDTPRSMEFLSIPFEFDSEVSV-SDFDF 125

Query: 128 SSSSMYSNSSFEVESKTKLIGRVTNSNRKPSNLKISLPNKTTQWINFDAAEKKNPVVVQR 187
             S+   N  FE E K+++        RKP  LKISLP K T+WI F AAE   P V   
Sbjct: 126 KPSNQNQN-QFEPELKSQI--------RKPP-LKISLPAK-TEWIQF-AAENTKPEV--- 185

Query: 188 SKDLEAEKKVHYRGVRQRPWGKFAAEIRDPNRRGSRVWLGTFETAIEAARAYDRAAFKLR 247
           +K +  E+K HYRGVRQRPWGKFAAEIRDPN+RGSRVWLGTF+TAIEAARAYD AAF+LR
Sbjct: 186 TKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLR 245

Query: 248 GSKAILNFPLEAANSYYSEPIVAGKRRREEEVEEVVEAVPVKKEKTEEMNFPAADVSFLK 307
           GSKAILNFPLE     +      G+++R+ + +E V  V  K  KTE+    + DV+  +
Sbjct: 246 GSKAILNFPLEVGK--WKPRADEGEKKRKRDDDEKVTVVE-KVLKTEQ----SVDVNGGE 300

Query: 308 DMPLTPSSWSMVWDGESKGLLNIPPLSPLS---PFGFPQLMVV 344
             P   S+ + + D +  G LN P LSPLS   PFG+ QL VV
Sbjct: 306 TFPFVTSNLTELCDWDLTGFLNFPLLSPLSPHPPFGYSQLTVV 300

[Close]

BLAST of CmaCh16G011170 vs. TAIR 10
Match: AT4G17490.1 (ethylene responsive element binding factor 6 )

HSP 1 Score: 169.5 bits (428), Expect = 4.8e-42
Identity = 146/343 (42.57%), Postives = 179/343 (52.19%), Query Frame = 0


Query: 8   EAAALENIKLHLLGELSPLPRNLASDDSLCVTSSDRSVSSDASTTSNCPLTITDYFDPDD 67
           E +AL  IK +LL ELSPLP                       TT+     + D+   D 
Sbjct: 6   EVSALFLIKKYLLDELSPLP-----------------------TTATTNRWMNDFTSFDQ 65

Query: 68  F-FEFSSDLIQDESSILSNDDFFGVEMKPNVIDLTMPKSEEFLEFETKPSVFEDLSLSSS 127
             FEFS                   E KP +IDL  PK E F +F+ K  +  +      
Sbjct: 66  TGFEFSE-----------------FETKPEIIDLVTPKPEIF-DFDVKSEIPSE------ 125

Query: 128 SMYSNSSFEVESKTKLIGRVTNSNRKPSNLKISLPNKTTQWINFDAAEKKNPVVVQRSKD 187
              SN SF  +S    +     SNRKP  LKI+ PN+ T+WI F     K  + V     
Sbjct: 126 ---SNDSFTFQSNPPRV--TVQSNRKPP-LKIAPPNR-TKWIQFATGNPKPELPV---PV 185

Query: 188 LEAEKKVHYRGVRQRPWGKFAAEIRDPNRRGSRVWLGTFETAIEAARAYDRAAFKLRGSK 247
           + AE+K HYRGVR RPWGKFAAEIRDP RRG+RVWLGTFETAIEAARAYD+ AF+LRGSK
Sbjct: 186 VAAEEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSK 245

Query: 248 AILNFPLEAANSYYSEPIVAG---KRRREEEVEEVVEAVPVKKEKTEEMNFPAADVSFLK 307
           AILNFPLE            G   KR+R+ E EEV   V  K  KTEE    + DVS  +
Sbjct: 246 AILNFPLEVDKWNPRAEDGRGLYNKRKRDGEEEEV--TVVEKVLKTEE----SYDVSGGE 282

Query: 308 DMPLTPSSWSMVWDGESKGLLNIPPLSPLS---PFGFPQLMVV 344
           ++    S  + + D +    L++P LSPLS   PFG+PQL VV
Sbjct: 306 NV---ESGLTAIDDWDLTEFLSMPLLSPLSPHPPFGYPQLTVV 282

[Close]

BLAST of CmaCh16G011170 vs. TAIR 10
Match: AT5G61600.1 (ethylene response factor 104 )

HSP 1 Score: 144.4 bits (363), Expect = 1.6e-34
Identity = 93/227 (40.97%), Postives = 130/227 (57.27%), Query Frame = 0


Query: 118 FEDLSLSSSSMYSNSSFEVESKTKLIGRVTNSNRKPSNL----KISLPNKTTQWINFDAA 177
           F  +     S+++N      S+T     +TN + KP++     K  LPN +         
Sbjct: 21  FVSMETDHPSLFTNQLHNFHSETG-PRTITNQSPKPNSTLNQRKPPLPNLSVSRTVSTKT 80

Query: 178 EKKNPVVVQRSKDLEAEKKVHYRGVRQRPWGKFAAEIRDPNRRGSRVWLGTFETAIEAAR 237
           EK+             E++ HYRGVR+RPWGK+AAEIRDPN++G R+WLGT++TA+EA R
Sbjct: 81  EKE-------------EEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGR 140

Query: 238 AYDRAAFKLRGSKAILNFPLE---AANSYYSEPIVA-GKRRREE-EVEEVVEAVPVKKEK 297
           AYD+AAF+LRG KAILNFPL+    + +   E ++  GKR+R++    E  +A  VK E+
Sbjct: 141 AYDQAAFQLRGRKAILNFPLDVRVTSETCSGEGVIGLGKRKRDKGSPPEEEKAARVKVEE 200

Query: 298 TEEMNFPAADVSFLKDMPLTPSSWSMVWD-GESKGLLNIPPLSPLSP 335
            E       +      +PLTPSSW   WD G   G+ +IPPLSP SP
Sbjct: 201 EESNTSETTEAEVEPVVPLTPSSWMGFWDVGAGDGIFSIPPLSPTSP 233

[Close]

BLAST of CmaCh16G011170 vs. TAIR 10
Match: AT5G51190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-33
Identity = 90/203 (44.33%), Postives = 113/203 (55.67%), Query Frame = 0


Query: 147 TNSNRKPSNLKISLPNKTTQWINFDAAEKKNPVVVQRSKDLEAEKKVHYRGVRQRPWGKF 206
           T S RKP    I++P                PVV +  +        HYRGVR+RPWGK+
Sbjct: 44  TLSQRKPPLATIAVPTTA-------------PVVQENDQR-------HYRGVRRRPWGKY 103

Query: 207 AAEIRDPNRRGSRVWLGTFETAIEAARAYDRAAFKLRGSKAILNFPLEAAN----SYYSE 266
           AAEIRDPN++G RVWLGTF+TA+EAAR YD+AAFKLRGSKAILNFPLEA          +
Sbjct: 104 AAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLEAGKHEDLGDNKK 163

Query: 267 PIVAGKRRREEEVEEVVEAVPVKKEKTEEMNFPAADVSFLKDMPLTPSSWSMVWDG---E 326
            I    +R+ +  E+  + +  K  K EE    A         PLTPSSW   WDG   +
Sbjct: 164 TISLKAKRKRQVTEDESQLISRKAVKREEAQVQA------DACPLTPSSWKGFWDGADSK 220

Query: 327 SKGLLNIPPLSPLSPFGFPQLMV 343
             G+ ++P LSP    G  QL+V
Sbjct: 224 DMGIFSVPLLSPCPSLGHSQLVV 220

[Close]

BLAST of CmaCh16G011170 vs. TAIR 10
Match: AT5G61590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 9.7e-27
Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 180 VVQRSKDLEAEKKVHYRGVRQRPWGKFAAEIRDPNRRGSRVWLGTFETAIEAARAYDRAA 239
           V  R K    E+  HYRGVR+RPWGKFAAEIRDP ++GSR+WLGTFE+ I+AARAYD AA
Sbjct: 92  VSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAA 151

Query: 240 FKLRGSKAILNFPLEAANSYYSEPIVAGKRRREEEVEE 278
           FKLRG KA+LNFPL+A    Y  P+ + ++RR  +V +
Sbjct: 152 FKLRGRKAVLNFPLDAGK--YDAPVNSCRKRRRTDVPQ 187

The following BLAST results are available for this feature:

BLAST of CmaCh16G011170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80341	3.7e-47	44.61	Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q40478	5.3e-46	51.27	Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 ...	[more]
Q8VZ91	6.7e-41	42.57	Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9LW48	1.5e-40	48.03	Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
Q9FKG1	2.3e-33	40.97	Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmaCh16G011170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47230.1	2.6e-48	44.61	ethylene responsive element binding factor 5	[more]
AT4G17490.1	4.8e-42	42.57	ethylene responsive element binding factor 6	[more]
AT5G61600.1	1.6e-34	40.97	ethylene response factor 104	[more]
AT5G51190.1	1.1e-33	44.33	Integrase-type DNA-binding superfamily protein	[more]
AT5G61590.1	9.7e-27	60.20	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 195..206 score: 74.24 coord: 234..254 score: 59.74
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 194..258 e-value: 1.4E-38 score: 144.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 194..244 e-value: 1.3E-15 score: 57.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 194..252 score: 24.447287
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 194..252 e-value: 2.11474E-32 score: 113.521
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 193..254 e-value: 3.0E-29 score: 103.0
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 7..330
None	No IPR available	PANTHER	PTHR31677:SF64	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6	coord: 7..330
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 194..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G011170.1	CmaCh16G011170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity