CmaCh16G011150 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G011150
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Ubiquitin carboxyl-terminal hydrolase
Location	Cma_Chr16: 8576159 .. 8579845 (+)
RNA-Seq Expression	CmaCh16G011150
Synteny	CmaCh16G011150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTGTGGACCAAAGCCCTTCAGCTAAGCGTTGGCTTCCTCTCGAAGCTAACCCTGATGTTATGAACCAGGTATAGGTACTTCCGTTCTGTTCTGATTTGGCTTCTAGATTCGAGCTCTGGTTAGTGGAAAGAGGATTCGAAGGGCGATTCTCAACTTTTCTTGGGATGGGATGTATTTCAATGTCTCCGCATTTTCTTGGTGTATCTATACGGTTTTCGTGCCTGTTTGTTCATTCTATTTCTTATTGCTGATTTGTGTGAGCGATCTGTATTTTGTTGAAGTGAGAGAGAAATCTGAGAGGAGATAATGAGAATTTCTTTCAAATTTTTTTTGTTATCATTTTGATTTGGTCCTCCGGATTAATGATTTTGCACTCTTTGGGGCTTTCTCGTTCAGTCCAAATCGCCTATTTGACTAACTGGGATGTTTTTATGCGTGCTGTATACTCTGTTAGCCAGTTGAATTTCTTAGTTTATCTTGATAAGGATGGTGTGCCCATGTTATTGGAATCACGGCTTACTTTTGAAGTGATCGTTTTCTTTTCCTTCCCTTTCATTCAAATAATGTTTCGCTATATATATATATATATATATATAACCCAATTGCTGCTTGATTTTAGAAGATAATAGCATCATCAAGTTTCCATATATCCTCTAATGTTCGACAAACTTCTGTTTTGTTATTCCAAAGTTCCTTTGGGGTCTTGGTCTTCCAGAAGATGAAGCAGAGTGCAATGATGTTTATGGCTTGGATGAAGAACTCTTGGACATGGTGCCTAAGCCTGTACTGGCGGTGGTGTTTCTTTATCCCATAACTCAAAAGGTTTGCTTACAGATAAAGTTCAGTTGTAATGATGTTTATAAGTTTGAAGAATTCCCTCGACATAAAACGAAGAAAATAGTTTTTCATTTTCTAAATGTTTTAATGTTTTCAGTGTAAAGACGAGAGGCTGCAACAGGAAGAAGATGCAAAGAATGTGAGTATGAGAATTGACAAGTTAAGCAAGTGTTTTCAGTCCTCTTTATATTATGACATACCAATAGACTGAACTGTTTAGATACGTTTCCCTTCTAGATTAGGATGTTACTTGGTGTTTGTCTAATGTATGTTCGGTCTGCGTGACTTGTTTAAGATTTTCCATCTGCAAATCAGGAAAAACGTTTTTCCGTCTGTCGTAAATTGTTTAAAATTCTGTCTGGTTGCATACTCTAGCATGGACAATCCAGTTTTGGTGCATGTTATTGGGTCATTTTTAATAACATTGTTAAAATGTTTCATATCCGTGCAAGTGTTATCTAATAAGGCTCTTTGTTTCTGTTGTGATCCTAGGATTATAGTGATCGAGTATACTTTATGAAACAAACTGTTGGCAATGCCTGTGGAACTATTGGACTTCTTCATGCCATAGGGAACATTACTTCCGAGATTAAGCTTTGTAAGTACTGAGAGATGCTAGTCAATTTGACGCTCTGAAATATATTTCTTCGAATCATGTAGCATTGTGATCCTCTACCTTTTGCTCAGGGGCCTTCGTATTGTATCTGTTCTCCTCTTATATGCACATGTAGAGTAGAGAATTGGTCATTTAAGGAGTTATGAAAGCTATCTTTCATTGAAAATAAGCAGAAACACGAATTAAATATGAAAGTGAAACGAAGAATTATTCTGCAGGGTCATTCATATGTTTAATTTCGTGATCGTGTTCTGGTTTACCATGGAGGTTTAAGTATCCGAATTGAGTCCTGTGGCTGGTCACAATCATTCTACTATAATCACGTTGATCAAGTTTATCAGTGTCTTTACTTGTCTGCTTGTTCTGGTGATTCCTGAGTGATTACTGCACTGCTGTTATGATATTCTTTCAGTTCTAGTACATCTTATTTTTCTTTTCTTTTTTCTTTTTTCTTTTTTTAACTTCTGTGCTTTGTCTTTTTTTTAAGCCGAGGGATCGTTCTTGGATAGGTTCTTCAAGTCTACCAAAAGCATGGATCCGATGGAGGTTGTATTTATAAACACATGCTTCTCTTACACACCCCGTCTATTTCCCCACCCCACCACCACCCAAAAATTTTCGTATACAGAAAAGGACGAACATATCAAGAAACGCAAGGAATAAAATAAATTATTTATCAATCCTTTCCTTTGTCCAGTTGATGCTTACCCAAAATATTTTTCCTTTTGCTTCTAATAGTCGTATGTTGTTCACTTTGATAGCGTGCAGTATTTCTTGGGGAAGACAGAGAAATGGAAGTTGCACATTCAGTAGCAGCAAATGCTGGTGATACGACGGTAAGTATCGTTTCAAGTTTTCTGAATAATGGTGGAGTATATTTAGAATAAATAGATACCTTATCGAGGCTGCGTTCAGCATGTAAGAGTGAACCTTCAGCCATTGTCTTGTTTTTTCAGATAAAGCTTTGACAGGCTGACAGCTATCCTCTGGTGATAGGAATTTCTTTCAGTTACCTCCACAGCAAATCAGAGAATTTAATAATTAAATTGTAGATGATCAGTGAAAATGGATGATTTTTGAAAGTTCAAGATCTAACGACAGAGTTGGTTGTATAATAGAGGAAAAAGTAGATAAGAGATTGTATGAACATAAAATGCATTCACTGGAACAGATGCTCGTTATTTCTCCCTGTATATGAATACACGTATACGTGCTGACTTATCTTTTCTTATTTGGCTCATCTTTTCTTCTCATTACGTACAGGCTCCAGAAAAGGTCGATACTCACTTTATCTGCTTCTCATGTGTGGACGGTAAACACTTCTTAGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCCAAGGAAAAAAATATTTTCTTTGGAGTCTACAATGAATTGGGTCATCAGATTTTTAAGAAATGATCTAATCTACAGTATCCTAATTATACAGGTGTACTTTATGAGCTCGATGGGATGAAGTCGATGCCAATATCACACGGTGCATCATCACCGGACACTCTATTACAGGTAAATAATTGCTCTGAATGTTATCCTGGTTTGTTTTAACCAGTTATGTTTATTGTCCTGTTTGAATCACCTTGCATGTTTATCTCGATTCGCCAATGAATCATACACAACAAAATATTACACTTCTGTTCTCTGCATTTAATGAAATGATTGATGAAATCACAGGATACAGCCAAAGTCATAAAAGACATAATCTCGAAAAATCCCGACTCGCTGAGATTCAATGTCATTGCCATTTCAAAGAAAGTCGGGGATGCATCTTAAGGCGACCAGGTTTGATCTGATTTAGTCTTTGCATCAATGAACAAGTCCTATGCGTAATTATCGCTTTACGTAGATGCATCTATGAGAAGTCTGTTGAGATGAAGGAAGTGTTTAATATTTGCATCAAACTGTGTTTTGTGTGGTTTCAGAATTTGCTAATGACTAGAGAAGTTGTTCATTGCTTTGGTATGCAAGGTGATATTGATTGAGTCTAAAATTAGTATTAAGTTCTGAGTCTGAATATTAGGAGTTAGGTTTTGACCTTTGAGGTTTTGAAAATTAGTATTTTGCTTTCTTGGAATACAAATCTTATGAAAACATCCGTAGATGACTTTTTGAGATCATAGCTCAAATTTGAATGGTTAGTTTCAAGCTTCTCATTTTCATAGATTCGTAACATTTTTGTCTTTTTGAGTTGAGATGTCTACTTTACCCGTG

mRNA sequence

ATGGCTTCTGTGGACCAAAGCCCTTCAGCTAAGCGTTGGCTTCCTCTCGAAGCTAACCCTGATGTTATGAACCAGTTCCTTTGGGGTCTTGGTCTTCCAGAAGATGAAGCAGAGTGCAATGATGTTTATGGCTTGGATGAAGAACTCTTGGACATGGTGCCTAAGCCTGTACTGGCGGTGGTGTTTCTTTATCCCATAACTCAAAAGTGTAAAGACGAGAGGCTGCAACAGGAAGAAGATGCAAAGAATGATTATAGTGATCGAGTATACTTTATGAAACAAACTGTTGGCAATGCCTGTGGAACTATTGGACTTCTTCATGCCATAGGGAACATTACTTCCGAGATTAAGCTTTCCGAGGGATCGTTCTTGGATAGGTTCTTCAAGTCTACCAAAAGCATGGATCCGATGGAGCGTGCAGTATTTCTTGGGGAAGACAGAGAAATGGAAGTTGCACATTCAGTAGCAGCAAATGCTGGTGATACGACGGCTCCAGAAAAGGTCGATACTCACTTTATCTGCTTCTCATGTGTGGACGGTGTACTTTATGAGCTCGATGGGATGAAGTCGATGCCAATATCACACGGTGCATCATCACCGGACACTCTATTACAGGATACAGCCAAAGTCATAAAAGACATAATCTCGAAAAATCCCGACTCGCTGAGATTCAATGTCATTGCCATTTCAAAGAAAGTCGGGGATGCATCTTAAGGCGACCAGGTTTGATCTGATTTAGTCTTTGCATCAATGAACAAGTCCTATGCGTAATTATCGCTTTACGTAGATGCATCTATGAGAAGTCTGTTGAGATGAAGGAAGTGTTTAATATTTGCATCAAACTGTGTTTTGTGTGGTTTCAGAATTTGCTAATGACTAGAGAAGTTGTTCATTGCTTTGGTATGCAAGGTGATATTGATTGAGTCTAAAATTAGTATTAAGTTCTGAGTCTGAATATTAGGAGTTAGGTTTTGACCTTTGAGGTTTTGAAAATTAGTATTTTGCTTTCTTGGAATACAAATCTTATGAAAACATCCGTAGATGACTTTTTGAGATCATAGCTCAAATTTGAATGGTTAGTTTCAAGCTTCTCATTTTCATAGATTCGTAACATTTTTGTCTTTTTGAGTTGAGATGTCTACTTTACCCGTG

Coding sequence (CDS)

ATGGCTTCTGTGGACCAAAGCCCTTCAGCTAAGCGTTGGCTTCCTCTCGAAGCTAACCCTGATGTTATGAACCAGTTCCTTTGGGGTCTTGGTCTTCCAGAAGATGAAGCAGAGTGCAATGATGTTTATGGCTTGGATGAAGAACTCTTGGACATGGTGCCTAAGCCTGTACTGGCGGTGGTGTTTCTTTATCCCATAACTCAAAAGTGTAAAGACGAGAGGCTGCAACAGGAAGAAGATGCAAAGAATGATTATAGTGATCGAGTATACTTTATGAAACAAACTGTTGGCAATGCCTGTGGAACTATTGGACTTCTTCATGCCATAGGGAACATTACTTCCGAGATTAAGCTTTCCGAGGGATCGTTCTTGGATAGGTTCTTCAAGTCTACCAAAAGCATGGATCCGATGGAGCGTGCAGTATTTCTTGGGGAAGACAGAGAAATGGAAGTTGCACATTCAGTAGCAGCAAATGCTGGTGATACGACGGCTCCAGAAAAGGTCGATACTCACTTTATCTGCTTCTCATGTGTGGACGGTGTACTTTATGAGCTCGATGGGATGAAGTCGATGCCAATATCACACGGTGCATCATCACCGGACACTCTATTACAGGATACAGCCAAAGTCATAAAAGACATAATCTCGAAAAATCCCGACTCGCTGAGATTCAATGTCATTGCCATTTCAAAGAAAGTCGGGGATGCATCTTAA

Protein sequence

MASVDQSPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEELLDMVPKPVLAVVFLYPITQKCKDERLQQEEDAKNDYSDRVYFMKQTVGNACGTIGLLHAIGNITSEIKLSEGSFLDRFFKSTKSMDPMERAVFLGEDREMEVAHSVAANAGDTTAPEKVDTHFICFSCVDGVLYELDGMKSMPISHGASSPDTLLQDTAKVIKDIISKNPDSLRFNVIAISKKVGDAS

Homology

[Close]

BLAST of CmaCh16G011150 vs. ExPASy Swiss-Prot
Match: Q8GWE1 (Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana OX=3702 GN=UCH3 PE=2 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 5.6e-95
Identity = 170/233 (72.96%), Postives = 199/233 (85.41%), Query Frame = 0


Query: 1   MASVDQSPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEELLDMVPKPVLAV 60
           MA+  +S S+KRWLPLE+NPDVMNQ+LWGLGL  DEAECNDVYGLD+ELL+MVPKPVLAV
Sbjct: 1   MATASESSSSKRWLPLESNPDVMNQYLWGLGLAPDEAECNDVYGLDDELLEMVPKPVLAV 60

Query: 61  VFLYPITQKCKDERLQQEEDAKND-YSDRVYFMKQTVGNACGTIGLLHAIGNITSEIKLS 120
           +FLYPIT+K ++ER++Q+++ K   +SD+VYFMKQTVGNACGTIGLLHAIGNITSEIKLS
Sbjct: 61  LFLYPITKKSEEERIEQDKEIKEKVHSDKVYFMKQTVGNACGTIGLLHAIGNITSEIKLS 120

Query: 121 EGSFLDRFFKSTKSMDPMERAVFLGEDREMEVAHSVAANAGDTTAPEKVDTHFICFSCVD 180
           +GSFLDRFFKST +M PMERA FL  D ++E AHSVA  AGDT A E  DTHFIC +CV+
Sbjct: 121 DGSFLDRFFKSTANMTPMERAKFLENDSQIEDAHSVAVIAGDTPASEDADTHFICLACVE 180

Query: 181 GVLYELDGMKSMPISHGASSPDTLLQDTAKVIKDIISKNPDSLRFNVIAISKK 233
           G LYELDG K+ PISHGASSP TLL+D  KVIK +I KNP SL FN+IAISK+
Sbjct: 181 GELYELDGRKAGPISHGASSPATLLKDATKVIKKMIEKNPGSLNFNLIAISKR 233

[Close]

BLAST of CmaCh16G011150 vs. ExPASy Swiss-Prot
Match: Q2TBG8 (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus OX=9913 GN=UCHL3 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-55
Identity = 116/226 (51.33%), Postives = 149/226 (65.93%), Query Frame = 0


Query: 11  KRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEELLDMVPKPVLAVVFLYPITQKC 70
           +RWLPLEANP+V NQFL  LGL     +  DVYG+D ELL MVP+PV AV+ L+PIT+K 
Sbjct: 4   QRWLPLEANPEVTNQFLKQLGL-HPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKY 63

Query: 71  KDERLQQEEDAKN---DYSDRVYFMKQTVGNACGTIGLLHAIGNITSEIKLSEGSFLDRF 130
           +  R ++EE  K+   D +  VYFMKQT+ NACGTIGL+HAI N   ++    GS L +F
Sbjct: 64  EVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKF 123

Query: 131 FKSTKSMDPMERAVFLGEDREMEVAHSVAANAGDTTAP---EKVDTHFICFSCVDGVLYE 190
            + + SM P ERA +L     + V H  +A+ G T AP   EKVD HFI    VDG LYE
Sbjct: 124 LEESASMSPEERARYLENYDAIRVTHETSAHEGQTEAPNIDEKVDLHFIALVHVDGHLYE 183

Query: 191 LDGMKSMPISHGASSPDTLLQDTAKVIKDIISKNPDSLRFNVIAIS 231
           LDG K  PI+HG +S +TLL+D  +V K  + ++PD LRFN IA+S
Sbjct: 184 LDGRKPFPINHGETSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228

[Close]

BLAST of CmaCh16G011150 vs. ExPASy Swiss-Prot
Match: P15374 (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens OX=9606 GN=UCHL3 PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55
Identity = 116/226 (51.33%), Postives = 149/226 (65.93%), Query Frame = 0


Query: 11  KRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEELLDMVPKPVLAVVFLYPITQKC 70
           +RWLPLEANP+V NQFL  LGL     +  DVYG+D ELL MVP+PV AV+ L+PIT+K 
Sbjct: 4   QRWLPLEANPEVTNQFLKQLGL-HPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKY 63

Query: 71  KDERLQQEEDAKN---DYSDRVYFMKQTVGNACGTIGLLHAIGNITSEIKLSEGSFLDRF 130
           +  R ++EE  K+   D +  VYFMKQT+ NACGTIGL+HAI N   ++    GS L +F
Sbjct: 64  EVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKF 123

Query: 131 FKSTKSMDPMERAVFLGEDREMEVAHSVAANAGDTTAP---EKVDTHFICFSCVDGVLYE 190
            + + SM P ERA +L     + V H  +A+ G T AP   EKVD HFI    VDG LYE
Sbjct: 124 LEESVSMSPEERARYLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYE 183

Query: 191 LDGMKSMPISHGASSPDTLLQDTAKVIKDIISKNPDSLRFNVIAIS 231
           LDG K  PI+HG +S +TLL+D  +V K  + ++PD LRFN IA+S
Sbjct: 184 LDGRKPFPINHGETSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228

[Close]

BLAST of CmaCh16G011150 vs. ExPASy Swiss-Prot
Match: Q9JKB1 (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus OX=10090 GN=Uchl3 PE=1 SV=2)

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55
Identity = 116/226 (51.33%), Postives = 149/226 (65.93%), Query Frame = 0


Query: 11  KRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEELLDMVPKPVLAVVFLYPITQKC 70
           +RWLPLEANP+V NQFL  LGL     +  DVYG++ ELL MVP+PV AV+ L+PIT+K 
Sbjct: 4   QRWLPLEANPEVTNQFLKQLGL-HPNWQFVDVYGMEPELLSMVPRPVCAVLLLFPITEKY 63

Query: 71  KDERLQQEEDAKN---DYSDRVYFMKQTVGNACGTIGLLHAIGNITSEIKLSEGSFLDRF 130
           +  R ++EE  K+   D +  VYFMKQT+ NACGTIGL+HAI N   ++    GS L +F
Sbjct: 64  EVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKF 123

Query: 131 FKSTKSMDPMERAVFLGEDREMEVAHSVAANAGDTTAP---EKVDTHFICFSCVDGVLYE 190
            + + SM P ERA FL     + V H  +A+ G T AP   EKVD HFI    VDG LYE
Sbjct: 124 LEESVSMSPEERAKFLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYE 183

Query: 191 LDGMKSMPISHGASSPDTLLQDTAKVIKDIISKNPDSLRFNVIAIS 231
           LDG K  PI+HG +S +TLL+D  +V K  + ++PD LRFN IA+S
Sbjct: 184 LDGRKPFPINHGKTSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228

[Close]

BLAST of CmaCh16G011150 vs. ExPASy Swiss-Prot
Match: Q06AB3 (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Sus scrofa OX=9823 GN=UCHL3 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.9e-55
Identity = 116/226 (51.33%), Postives = 150/226 (66.37%), Query Frame = 0


Query: 11  KRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEELLDMVPKPVLAVVFLYPITQKC 70
           +RWLPLEANP+V NQFL  LGL     +  DVYG+D ELL MVP+PV AV+ L+PIT+K 
Sbjct: 4   QRWLPLEANPEVTNQFLKQLGL-HPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKY 63

Query: 71  KDERLQQEEDAKN---DYSDRVYFMKQTVGNACGTIGLLHAIGNITSEIKLSEGSFLDRF 130
           +  R ++EE  K+   D +  VYFMKQT+ NACGTIGL+HAI N  +++    GS L +F
Sbjct: 64  EVFRTEEEEKIKSQGQDVTPSVYFMKQTISNACGTIGLIHAIANNKNKMHFESGSTLKKF 123

Query: 131 FKSTKSMDPMERAVFLGEDREMEVAHSVAANAGDTTAP---EKVDTHFICFSCVDGVLYE 190
            + + SM P ERA +L     + V H  +A+ G T AP   EKVD HFI    VDG LYE
Sbjct: 124 LEESASMSPDERARYLESYDAIPVTHETSAHEGQTEAPNIDEKVDLHFIALVHVDGHLYE 183

Query: 191 LDGMKSMPISHGASSPDTLLQDTAKVIKDIISKNPDSLRFNVIAIS 231
           LDG K  PI+HG +S +TLL+D  +V K  + ++PD LRFN IA+S
Sbjct: 184 LDGRKPFPINHGETSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228

[Close]

BLAST of CmaCh16G011150 vs. TAIR 10
Match: AT4G17510.1 (ubiquitin C-terminal hydrolase 3 )

HSP 1 Score: 348.6 bits (893), Expect = 4.0e-96
Identity = 170/233 (72.96%), Postives = 199/233 (85.41%), Query Frame = 0


Query: 1   MASVDQSPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEELLDMVPKPVLAV 60
           MA+  +S S+KRWLPLE+NPDVMNQ+LWGLGL  DEAECNDVYGLD+ELL+MVPKPVLAV
Sbjct: 1   MATASESSSSKRWLPLESNPDVMNQYLWGLGLAPDEAECNDVYGLDDELLEMVPKPVLAV 60

Query: 61  VFLYPITQKCKDERLQQEEDAKND-YSDRVYFMKQTVGNACGTIGLLHAIGNITSEIKLS 120
           +FLYPIT+K ++ER++Q+++ K   +SD+VYFMKQTVGNACGTIGLLHAIGNITSEIKLS
Sbjct: 61  LFLYPITKKSEEERIEQDKEIKEKVHSDKVYFMKQTVGNACGTIGLLHAIGNITSEIKLS 120

Query: 121 EGSFLDRFFKSTKSMDPMERAVFLGEDREMEVAHSVAANAGDTTAPEKVDTHFICFSCVD 180
           +GSFLDRFFKST +M PMERA FL  D ++E AHSVA  AGDT A E  DTHFIC +CV+
Sbjct: 121 DGSFLDRFFKSTANMTPMERAKFLENDSQIEDAHSVAVIAGDTPASEDADTHFICLACVE 180

Query: 181 GVLYELDGMKSMPISHGASSPDTLLQDTAKVIKDIISKNPDSLRFNVIAISKK 233
           G LYELDG K+ PISHGASSP TLL+D  KVIK +I KNP SL FN+IAISK+
Sbjct: 181 GELYELDGRKAGPISHGASSPATLLKDATKVIKKMIEKNPGSLNFNLIAISKR 233

[Close]

BLAST of CmaCh16G011150 vs. TAIR 10
Match: AT5G16310.1 (Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 )

HSP 1 Score: 80.1 bits (196), Expect = 2.6e-15
Identity = 61/237 (25.74%), Postives = 113/237 (47.68%), Query Frame = 0


Query: 13  WLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEELLDMVPKPVLAVVFLYPITQKCKD 72
           WLP+E++P +  + +  + +   + E  ++Y LD   LD + +PV  ++ LY    + K+
Sbjct: 3   WLPVESDPGIFTEIIQQMQVKGVQVE--ELYSLDFNSLDEI-RPVYGLILLYKWRPEEKE 62

Query: 73  ERLQQEEDAKNDYSDRVYFMKQTVGNACGTIGLLHAIGNITSEIKLSEGSFLDRFFKSTK 132
            R+   E   N      +F  Q + NAC T  +L  + N +S   +  GS L    +  K
Sbjct: 63  NRVVITEPNPN-----FFFASQIINNACATQAILSVLMNSSS---IDIGSELSELKQFAK 122

Query: 133 SMDPMERAVFLGEDREMEVAHSVAANAGDTTAPEKVDT-------------HFICFSCVD 192
              P  + + +  +  +  AH+  A    ++  E  +              H+I +  VD
Sbjct: 123 EFPPELKGLAINNNEAIRAAHNTFARPDPSSIMEDEELAAAKNLDEDDDVYHYISYLPVD 182

Query: 193 GVLYELDGMKSMPISHG--ASSPDTL--LQDTAKVIKDIISK-NPDSLRFNVIAISK 232
           G+LYELDG+K  PIS G     P+ +  L+    V+++ I + + + +RF+++A+ K
Sbjct: 183 GILYELDGLKEGPISLGQCLGEPEGIEWLRMVQPVVQEQIDRYSQNEIRFSLLAVVK 228

[Close]

BLAST of CmaCh16G011150 vs. TAIR 10
Match: AT1G65650.1 (Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 )

HSP 1 Score: 79.3 bits (194), Expect = 4.5e-15
Identity = 68/235 (28.94%), Postives = 112/235 (47.66%), Query Frame = 0


Query: 13  WLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEELLDMVPKPVLAVVFLYPITQKCKD 72
           W  +E++P V  + +  + +   + E  ++Y LD + L+ + +PV  ++FL+      KD
Sbjct: 3   WCTIESDPGVFTELIQQMQVKGVQVE--ELYSLDSDSLNNL-RPVYGLIFLFKWQAGEKD 62

Query: 73  ERLQQEEDAKNDYSDRVYFMKQTVGNACGTIGLLHAIGNITSEIKLSEGSFLDRFFKSTK 132
           ER   ++   N     ++F  Q + NAC T  +L  + N + E+ +  G  L    + TK
Sbjct: 63  ERPTIQDQVSN-----LFFANQVINNACATQAILAILLN-SPEVDI--GPELSALKEFTK 122

Query: 133 SMDPMERAVFLGEDREMEVAHSVAAN-----AGDTTAPEKVDT--HFICFSCVDGVLYEL 192
           +     + + +     +  AH+  A        +  A  K D   HFI +  VDGVLYEL
Sbjct: 123 NFPSDLKGLAINNSDSIRAAHNSFARPEPFVPEEQKAATKDDDVYHFISYIPVDGVLYEL 182

Query: 193 DGMKSMPISHGASSPDTL----LQDTAKVIKDIISKNPDS-LRFNVIAISKKVGD 236
           DG+K  PIS G    D      LQ    VI++ I +   S +RFN++A+ K   D
Sbjct: 183 DGLKEGPISLGPCPGDQTGIEWLQMVQPVIQERIERYSQSEIRFNLLAVIKNRKD 226

The following BLAST results are available for this feature:

BLAST of CmaCh16G011150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWE1	5.6e-95	72.96	Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana OX=3702 GN=UCH3 ...	[more]
Q2TBG8	1.1e-55	51.33	Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus OX=9913 GN=UCHL3 ...	[more]
P15374	1.5e-55	51.33	Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens OX=9606 GN=UCHL...	[more]
Q9JKB1	1.5e-55	51.33	Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus OX=10090 GN=Uch...	[more]
Q06AB3	1.9e-55	51.33	Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Sus scrofa OX=9823 GN=UCHL3 ...	[more]

BLAST of CmaCh16G011150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17510.1	4.0e-96	72.96	ubiquitin C-terminal hydrolase 3	[more]
AT5G16310.1	2.6e-15	25.74	Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1	[more]
AT1G65650.1	4.5e-15	28.94	Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001578	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	PRINTS	PR00707	UBCTHYDRLASE	coord: 15..32 score: 49.21 coord: 182..192 score: 63.64 coord: 166..177 score: 44.05 coord: 53..65 score: 50.55 coord: 94..111 score: 65.87
IPR001578	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	PFAM	PF01088	Peptidase_C12	coord: 13..215 e-value: 1.0E-58 score: 198.6
IPR001578	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	PANTHER	PTHR10589	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	coord: 7..235
IPR036959	Peptidase C12, ubiquitin carboxyl-terminal hydrolase superfamily	GENE3D	3.40.532.10		coord: 7..232 e-value: 1.4E-78 score: 265.4
None	No IPR available	PANTHER	PTHR10589:SF44	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	coord: 7..235
None	No IPR available	CDD	cd09616	Peptidase_C12_UCH_L1_L3	coord: 13..229 e-value: 2.59333E-109 score: 311.878
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 11..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G011150.1	CmaCh16G011150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0004843	thiol-dependent deubiquitinase