CmaCh16G011070 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G011070
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Kelch repeat-containing protein
Location	Cma_Chr16: 8517491 .. 8518549 (+)
RNA-Seq Expression	CmaCh16G011070
Synteny	CmaCh16G011070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGTTTATGATGACGACGATCCCGTTATTTTTGGCTCGCCAGGGAATGTCTTCCGTCGCTGCCCCTTCACCGGCAAATCGAAATCCGGTGACGACGACTCTGATTCTGATTCATCGGATTCCGGAGCGTTCCATGTGGAGTCCACCGGCATTTTCATGTTATCCCTGCCTGATAGCTTGGAAGAGAATGCTGATAGTCTCCCTCATTCGTACGAGACCGCACCGGAAGAGTTGGTGCCGACCGGCTCCGATGGACGGAGGTCTGTAGCGGCGGACGCCATTGGTGCAGAGGTGAGCGTTGAATATGTCGACGATGGGAAGGCTATTGATTTGGGGAGGGATACGGATGTAGGGTTGTACTCGGAAGTTCAATCGACCGCGGAAACAGTTGAGAAGGATAAATCGATCGAAGTTGTTGATGATTGTAGAAGCCATAGTTCCGAAGCGAAGAAACGTAGAATTCCATTTGATGAATCGGAGGTCTCGTTGGGTGAATCCTCATCGAAAAAGTTGAGGTTATCCGAGGAAGCTTTAGGTTTGAGCTCTTGTGCAAGAATTTTTGTAGATAAATTTCCGGTTGATTCCACGAATTCCGGTGGAGGATCAAAAGTTAGTTCTGTAGATAACAACGAGGACTTCGGTGGAAAATGTGAGTTAAATGGAATGAATGACGGAGAAGTTTCCAATGGCGAGAATGGCGAAAATCACTGCAATTCCAAAGAGGAATCTACAGAGAAGGAAAGTGTGAAGAACTCTCAATCTGATAAGCAGAGCAATCTCCAAGAAGAAATTGCAAACGCTCACCGATCCTCGTCTCGGGTGCTACCACCTTCACTCAGAGGAGTGAAAAAAGATGCATCTGGGGAGAGGTCCAACACCTCTGAAGATCATCCTATGGAGGTCACTCTTTTGGAAATCTTGAAGATTCTCGCAGGAGAACAAGACAGGGAAAATGAATTCAATGATGAGGCTTTGTCAAATCTCAGCATTTTGGACATCGTCCAGCGCCGTGGAATGACACTTCCCCGGCCGGAGTGGTGGCCGCCGGAATACTGA

mRNA sequence

ATGAACGTTTATGATGACGACGATCCCGTTATTTTTGGCTCGCCAGGGAATGTCTTCCGTCGCTGCCCCTTCACCGGCAAATCGAAATCCGGTGACGACGACTCTGATTCTGATTCATCGGATTCCGGAGCGTTCCATGTGGAGTCCACCGGCATTTTCATGTTATCCCTGCCTGATAGCTTGGAAGAGAATGCTGATAGTCTCCCTCATTCGTACGAGACCGCACCGGAAGAGTTGGTGCCGACCGGCTCCGATGGACGGAGGTCTGTAGCGGCGGACGCCATTGGTGCAGAGGTGAGCGTTGAATATGTCGACGATGGGAAGGCTATTGATTTGGGGAGGGATACGGATGTAGGGTTGTACTCGGAAGTTCAATCGACCGCGGAAACAGTTGAGAAGGATAAATCGATCGAAGTTGTTGATGATTGTAGAAGCCATAGTTCCGAAGCGAAGAAACGTAGAATTCCATTTGATGAATCGGAGGTCTCGTTGGGTGAATCCTCATCGAAAAAGTTGAGGTTATCCGAGGAAGCTTTAGGTTTGAGCTCTTGTGCAAGAATTTTTGTAGATAAATTTCCGGTTGATTCCACGAATTCCGGTGGAGGATCAAAAGTTAGTTCTGTAGATAACAACGAGGACTTCGGTGGAAAATGTGAGTTAAATGGAATGAATGACGGAGAAGTTTCCAATGGCGAGAATGGCGAAAATCACTGCAATTCCAAAGAGGAATCTACAGAGAAGGAAAGTGTGAAGAACTCTCAATCTGATAAGCAGAGCAATCTCCAAGAAGAAATTGCAAACGCTCACCGATCCTCGTCTCGGGTGCTACCACCTTCACTCAGAGGAGTGAAAAAAGATGCATCTGGGGAGAGGTCCAACACCTCTGAAGATCATCCTATGGAGGTCACTCTTTTGGAAATCTTGAAGATTCTCGCAGGAGAACAAGACAGGGAAAATGAATTCAATGATGAGGCTTTGTCAAATCTCAGCATTTTGGACATCGTCCAGCGCCGTGGAATGACACTTCCCCGGCCGGAGTGGTGGCCGCCGGAATACTGA

Coding sequence (CDS)

ATGAACGTTTATGATGACGACGATCCCGTTATTTTTGGCTCGCCAGGGAATGTCTTCCGTCGCTGCCCCTTCACCGGCAAATCGAAATCCGGTGACGACGACTCTGATTCTGATTCATCGGATTCCGGAGCGTTCCATGTGGAGTCCACCGGCATTTTCATGTTATCCCTGCCTGATAGCTTGGAAGAGAATGCTGATAGTCTCCCTCATTCGTACGAGACCGCACCGGAAGAGTTGGTGCCGACCGGCTCCGATGGACGGAGGTCTGTAGCGGCGGACGCCATTGGTGCAGAGGTGAGCGTTGAATATGTCGACGATGGGAAGGCTATTGATTTGGGGAGGGATACGGATGTAGGGTTGTACTCGGAAGTTCAATCGACCGCGGAAACAGTTGAGAAGGATAAATCGATCGAAGTTGTTGATGATTGTAGAAGCCATAGTTCCGAAGCGAAGAAACGTAGAATTCCATTTGATGAATCGGAGGTCTCGTTGGGTGAATCCTCATCGAAAAAGTTGAGGTTATCCGAGGAAGCTTTAGGTTTGAGCTCTTGTGCAAGAATTTTTGTAGATAAATTTCCGGTTGATTCCACGAATTCCGGTGGAGGATCAAAAGTTAGTTCTGTAGATAACAACGAGGACTTCGGTGGAAAATGTGAGTTAAATGGAATGAATGACGGAGAAGTTTCCAATGGCGAGAATGGCGAAAATCACTGCAATTCCAAAGAGGAATCTACAGAGAAGGAAAGTGTGAAGAACTCTCAATCTGATAAGCAGAGCAATCTCCAAGAAGAAATTGCAAACGCTCACCGATCCTCGTCTCGGGTGCTACCACCTTCACTCAGAGGAGTGAAAAAAGATGCATCTGGGGAGAGGTCCAACACCTCTGAAGATCATCCTATGGAGGTCACTCTTTTGGAAATCTTGAAGATTCTCGCAGGAGAACAAGACAGGGAAAATGAATTCAATGATGAGGCTTTGTCAAATCTCAGCATTTTGGACATCGTCCAGCGCCGTGGAATGACACTTCCCCGGCCGGAGTGGTGGCCGCCGGAATACTGA

Protein sequence

MNVYDDDDPVIFGSPGNVFRRCPFTGKSKSGDDDSDSDSSDSGAFHVESTGIFMLSLPDSLEENADSLPHSYETAPEELVPTGSDGRRSVAADAIGAEVSVEYVDDGKAIDLGRDTDVGLYSEVQSTAETVEKDKSIEVVDDCRSHSSEAKKRRIPFDESEVSLGESSSKKLRLSEEALGLSSCARIFVDKFPVDSTNSGGGSKVSSVDNNEDFGGKCELNGMNDGEVSNGENGENHCNSKEESTEKESVKNSQSDKQSNLQEEIANAHRSSSRVLPPSLRGVKKDASGERSNTSEDHPMEVTLLEILKILAGEQDRENEFNDEALSNLSILDIVQRRGMTLPRPEWWPPEY

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh16G011070 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh16G011070 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..41
None	No IPR available	PANTHER	PTHR38221	BNAA04G14260D PROTEIN	coord: 14..352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G011070.1	CmaCh16G011070.1	mRNA