CmaCh16G010830 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G010830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Phenylalanine--tRNA ligase
Location	Cma_Chr16: 8313582 .. 8324237 (+)
RNA-Seq Expression	CmaCh16G010830
Synteny	CmaCh16G010830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGATTTTGCCGTCAAACCAAATTCAGGGCTTCTGTGAGCGTATTTGGCGTAGAGAAGAGATAGAGGAACTGCAGCTGCTCGTGAGCGTTGAAGAAGTGGCCGCAAAGCCATCGAGAAGATGGCGGAGGAAGCAATTCTCGGTTACCTTGAGAAGAACGTCGAAATCTCCGATTCCGGACGGTTCGCCGATGAGTTTAGACTTGATCACAACGAGGTCGTCAACGTCATCAAGAGTCTCAATGGCTTCAGATACGTCGATGCTGAAGTACAATTGCTTATTTTTGCTAATCATCATTTGTCTTTTAATCATTTATGTTTCTTTCTGGTTGGATGAATTTCTAGCATAGTAAGGTGATAACTAGCTTTAGATTGTTTGAGCTGGAAATGACGACTTGCCTGCCTTTGTACTTGTCATTGATTGCAGAATCGTTGACATTTGCTTGGTCCTCAACTCTCTGCGTCAATTCGAACGTGTCTGAACTTATTTTTGTAACTTTAAGCCTTGTCGTTGGTTTTGTATTTTTTTTGGTGTGTAGTAGACTAAAACTACAATTCTTGAGGACTCGTGAAGCGGTCAACTTACCGAAACAATTATTTTGTTTGATTTTAATTATATCTGATTGTTGCTGTAACATTTGATTGGTTTGCAGTCGGTTGTTAGTTTTGAGTGGGCTTCCCTGTGTTTAATTTGTGGTCTTTGGTTACTTCATATACTAATAACTTTACATTTTCACGAATAGTTAAACTGCGAATTCATTTATTGATCACATCTCTCTTTTGGAGAGTTTTTCAGGACATTAAGAAGGAGAAGTGGATTCTAACTGATGAGGGCGAGACATATACTGCTACAGGATCACCTGAGCTGCAGCTATTCTTGGCAATTCCACCCGAGGGAATTCCAAAGGAAGAACTACAGGTGATATTGCCGTCATGGATATTCATTTTGTTTTGACGTAGAGGATGAGGATTATTCCAATTTAAAACTTTTCATTCGAGGTTGATGATTTGAGAGTGTTAAGGATGGAAATTAGGCATTTTCCTTATTAGTTTTTGCCTTCATTTTCATATTTGTGGATATGAGTCTATATTAGTACTGAAGCTGTTTCTTGCCCATGTCCAACTGGTCTGGTTTTGCAGAAAAAGCTTGGTCCATCTATTTTCAAAATTGGCTGTGCTCAGGCAGCAAAGAACAAATGGGTTGAAATGGGGAAGCAATCGATATCCCGAAAGGTTAGAAATATTTTTTATTTTTTATTTTTTTGTGGGAGTTCATTATTAAGATATTGATAAAAATGATCTCAATTGGCGTTAATTGTATGAATTGTTATACTACTGCAACCAGGATATGACATGGATTAACTTCACACCAGTTTTATTTTATAGCTTAGATATTATAATTAAAGCACCTTTATTTTCTGTATGATTATTTACAAGTTTGTTTGGCTGTAGGTTCAACATGTTGAGGACAAGGTGAAAAATTCACTTCTGCAGATAAAAGATGGAAAGGTGATTATTGGTTTGCATGATTCATTTGTTTTGTATTACACAGATTCTTGGATATTGAAGCTTCAATAATGAGTTTCATCCATTTCTGGTTCATGGTCATATTGCATCACTAGGAAGCCGGTTGGAAAGTGGAAAGTGGCATCAGAATATTTAGTTACTATTAAATTATGGGAGTTTGTGAAATAATGACTAATATGTTGTTAAGAACTAAATTGTCATTTCTCATTATGTTCACTATGCATCTTTGTTTTTCCAAGTTTAGCCTATTTATATGCTCAAAATTTAGGTGACCGAATTGATGACATACAATATTTAACTCAACGTACATTTTAGAACACTTTCTCATGTTGCAAAGAAGTTTTGAGAGCACCATCAAAGTGTTTTAAGATGTTATACTGTTTCTAGAAATTTTTGTATTTGCTCCGTTACACAAGTCAATTAGAGAGAGAAAAAGAAACCTGCCTGTCTCGTAGGAAGGTTATTTCTTCCTCCTATTTTGTAATCATGTTTTGAACTAATACAACTATTTCTTTTAGGAAAACCCCCAAATTGACTCCAGTGTACTACCAAAGAGATTTGGATTATGGATCCTGATAATTTTTCATAGATAAGCAATTGTTAATGTACTACCAAACATGAGCATAACTCAACTGACATATAACATGTACTCTTGGTAAGAGGACACATGGATTACCCAGCATATATTGTTGAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCATTTAGGGTCAATGTAAAGAAAAAAACAATNTGTTGCAAATGTTTTGAGGCTTGGCCATCTACATCATTCCATTGTCTCCTGTCTGTTTTTTTTTTTTCCTTAATAATTTTTTTTAATATCTTGGTGTCGATCATCATCAGCTAATTATTTTGAATTTTGAGTCCAGGAAGTTCATGATGATGACGTGAAGGCACTCAAAGCAAGAAAGCTGATTGTATCACAGTAATTCTCGTACCTCACTTTCACTACTTATTCATTGGACATTTAAATATATTTAAAAAAATTTGCGTTCCTCTTGTCTGGTGTGTTAGGCATGTGGACCTCTGTATTTGGTTTTTCACCAGAGATGGGATGATATAATATTTCTTTGGATTGGTCAATATATCTTCTCTGTTTCTTTTATTCAAAAAAAAAAAAAAAAAAAAAAAGACTTTGGATTTGACGTTTTCATACTCTTTTGGATGAGGCTCAATTTCTATTCTGCTTTTGGTAAGAAATTGAGCATTCATTGAGTGAACAGAAGAATATACAGTATACGTGCAAACAAAAAAAAAAAAGCTCACAATAGGAGTTCACAACAAACTACAAGAATGGACTCCAGTCCAAAAAAATTCCACGAAGCTGAAAATTACAAATTACAAAAAGCTGAGTTGTTTTATATTTTAAGAAGCTTTTATGATTCTATATGCTTTTAACACTTGATACGGGTTCAATCTGTTTGTTATCTTAAAAATGTTTAATTTGACCTTCTCTAGAACATGGAAAGGCTACTCAGTGAAGAAGGGCCCTAGTTATGCTCCTAGAAGGAAAAAGGCTGCTACAGATTTGACACGAGAAAATCTTCAGAGGTTTCCTATTTGCCTATTCTTGTTTCGTGCTTGGATTTTATTTTATGACAGTATGCATTTGGTAACACAATTGCTGTACATTCAGCTGTTAAAAGTGTTTCTATTTTTGTATTTATATATATTTTTAAAAAAATTGTGTACGCACCCGAGGTCAGTTCTTCAGACGGTATATAGTTTGGCATTAAAACTCTCATTTTCTACTTCCATCAATCGTTTTCTTTGTATTGTGAGTTATTGTAGGCTAAAATATGTGTGTTGTTGTTGGAGGAATGACATTGCAACTGAAACGTCAATTATCATGTCCAGTTTGCTCATTTGTTTCTAGTTCATGTATCTTGTATCAAACAGCCTTGGAAACTTATAGATTTATCTCATATTTTGCACTATCTAGGGGAGACTGGAGAGAACTAGAATTCAAGGAGTATAACTTTAATGCCAAAGGTCAGCCCCTTGAGGGTGGTCATCTTCATCCATTGCTGAAGGTAATAATACGTATATTTTGAAAAGAATGAAAACCCTTCATTTAATTAGAAAATTATTAGTTAACATTAAACACCTTTAAGTAAGGGCATGCATGAATGCTTATGGGTTAATAATTATGCCAGTATTGATGATCAAATTACCCAGAGCAAAAATTACAATTATTTGTAGAATATGGAAAATGAATTCCTTAGTAGGAACTTGAATCTAGGGAATGTAGCACCTTTGATATTTTTATTGTTAGGCTCTTTTTAGTTCCTGTTTCATTCTCTCCCTTTGGGAAGGTGTAGTTTTGAACAATTTTCTTCCTTTTGATTAATCGAAAAAGTTGATTTCTTCTTTTAAGAAACAGAACTTTGTGACCATTGGGCTTTGAAATTAGATATAGGCAGATTGATGGTTGACACTGCCTGATTCTACTCCGATCATGTTTCTTACCTTCCAATAATCTTTAAACTAGTTATACTAGGTTGTAAATTTTTATTTCAGCACAAATCGCGTTCAATTTTTTTATGCTTTCCCCCTTCTCATGCATGCCTTATGCATCTGTTTATGTACTGAAATGGATTGTCTTTTGCTCTTAAAAAACTTTTAGGTCCGACAGCAATTAAAAAATATTTTTCGTCAAATGGGGTAAGTGATTTATCTTATGCTTACGCTTATCTTCTGTATTACTTTGTTGTTTTAAATAAAAATTTACAGTTTTAGGCCTGTGTTTTGGTTTCTGATTTCAGATTTGAAGAGATGCCTACCAATAACTTTGTCGAGAGCAGGTAGGAGTTCTCCCCTGCTCCCTTTCTTGAATGATACGTTTTACATCCATAGTTCTTTTTTAAAATGACTGAATATATGTCAGTACTATACAAAGTTCAACACATTTTTTTTTTGTTTTTTCCACCTTGGTATAGCGTTATAATTGTCTTATTGTGATGTAAATCAAGAGGCTCCCCACAAACATTTTTAAGAGGCACACTTGGCTCAACCTCACTTGGCATGCACCATAGTGAGATAAATTTTTTGCAAACGCTCTTCTTTTAGCTTTTCTATTCTTTAGCCTTTATTATTTTGATTATTATTTAAATTATTATTATCCGAGAACTGATAGCATATTCTTCTTTCTTTTTCTCTTTTCTTTTAGTTATATTTGTATGACCTCTCTACATACATGATTATAACCTAACTCATCTTCACCAGTTGGGCTTCTTTTTGTAACCCTTGGATGTGTGGGGGTATCTAATCTCTCCTCTTTTTTTTCTTTTTTTTTTTTAATCTCTTGATAATGAAAGTTCTGTTTCTTATATTTTAAAAAGTTAACTGTATATGCACGTGCATTAACTTCTGAGCTTCTAGAACCCAAGGAGAGGTTCGATTGGGAAAAGAAATGTGGCTTGCCTAAATATCTTTTCAAAACCTTATTAGCTTTTCTTTCTCTTCTGTACCAACAGCTTCTGGAACTTTGATGCATTATTCCAACCACAACAACACCCTGCCCGTGATGCGCATGATACTTTCTTCTTGCAAGGTTTCTTCCGTGATTGCTGAACATCAAAAGTTTTTTTTTATTTTTTTCTTAATAGTTATTTGGTTTTACCTCTGTAGCTCCTGCCAGCACAAGGGAACTTCCTGAAGATTATGTGGAGCGGGTGAAACAGGTCCATGAGATTGGTGGTTTTGGATCCAAAGGGTGTGATATTCTCTTCTTCAAACTGTCACCTTTCTTTCTTTGCTTAGTATTTCCGAGATTTTATTTTTTCTTGTGAGTGATTATTTGTATTATTCTGCCTCTTTCAGATATGGATATGATTGGAAACGAGAGGAAGCAAATAAGAACCTACTGCGAACTCATACAACTGCTGTGTCCTCCAGGATGTTATATTTGCTTGCACAGGTTCGTCATTGTTTGGTTTATATTCTATGTAGGCTTTGATAAACAATTTAATCAGTTCTGGTCAGCGTTCATGATTAAATACTGAAACAATGGGAGAATTGTTATGCATTCAAACATTCACAATTATTGGCTTTTGTTTTCAATCATATTTTCAAATTAAAACGTCCAAAAGCATTTGGATAAAATCATTGGAAAATAAGATTGAAGTTGTCAAATTTTGAACTAAAGTTCAAGAGAATGTTAAATTCTCAAAATTTATTGATTTGAAACCTCAATAAAAATTATTAACTAAAAAAATTTGAGGGAGTTATGGCCTATATTTGACGAAGGAGAAAAACGAAACACTCCTCACCAAATGGAATTAGACGTATTACCATGAAGGCACCACATTGTTGAGGAATCTTATAAAGAATCGGTTGCCCACCTTCTCCTTAGGGGCCATGGAAGTTTATGAAAAAGCACCATAACCTCATCACCAACCACATTCGCCATAGGATCGGTGAGGGAGGAAACACATCTTTGTAGACCGACCCTTCTGACCCTTGGATTGTCAACATCATGCTAGCTATGATGTATCCTCTTTTGTATGGACTATCGCAATGCAAGACAATCAAAGAAACATGGAAACATGACAACAAATTTTGGACTTGCAGCTCGATAGGGACCTGAAAGATAACAAGATACCGAATGAGCCGGATTAATTCACCTAAAAGATAGCGAAGATACAGAATGAGCCGATTTAACTCAATAGTGCTGTCTCAAGTAGCAAACTCATTGGAATAGCTTCCTAATGCTGACAAGGCCTTCTCATCCTTAATGATGGATGTGGGAGAAAAGACAAAAGCCATAAAGCCCACACTAACCAAGACAATATGGAAAATAAATCACCCAAAAAACCAGAAAATCGTGCACAAAATCATTAGCACAAAGGGAATCCTACCACAAAAAAAAAAGAACCCTTCATGACCCAATTTCCCAATGGGTGCCCTTTATGCAATAGAGACAACGAATCACAAAACCGCATATTTATATAGTAACTTATGCTTATAACTTATGGATAAAGATTCTAATACTTTCAGATCACACCTCACTTTCATGGAGAGGTGGATTTATTGGACTTGGTCTTAACATACCACTCCTTCAAAAGTGCAAAAGTTTTGTTATGTACCAACCTCATTATGGCTCTCTTTTGGAATCTCTGAAAAAAGCGAGATAAAAAAGTTCATGGAAAAGAAACAAACTTGGATCTTCGACAATATTGTTTACCGTGACATTTCATGGTGTAAATTGTTTAATACTTTTGCTTCCTATTGTCATACCTCATTCATTGTTAATTGGGAAGGTCTTTTATAAGCTTCACGGATAGCACATCCCTTTTGTAAATTTCAAACGCCAATGAAATAATTCTCTTATTAAAAATGAGAATATAATTATCTTAATTTAACCATGAATGTAATTTACCCAAATTAGATTTCAAGAAGTAATGTAATGTCAATTAAACCAAATTAAATCCATATTGACCTCCAAGATAAACGTAGTTTTACCTGATATGCATTACACTTATCCATTTTTCCTGATCCTCAATGTAACCACAACCGGTGGGCTGTGTTCTTCCAGACGTTGGAGATTTAATAGTTTCTGAAAGCTAGTGGAAGAAAAAATATTCAGAATGAGGAAGGACTCTGTGATTTATCTAATTTGCTGACGTAGATCCTACCTGAGTTAGAATTCCTATTAAGACGGACATTATGTCGCAAAAAATGGTGGATTATTTTTGGGGTGATTCCTTGGGTGCCGAAACTAATCATCTAAGTTGTCTGGTCAATTAAATTAAAAGAAAGGGATGGAGATTCGTATTGTCTATTTGTTAAGCCACTAAATTCTACTTCTATTGCAGATGATTTTTCCGATGCTTGTACTAGCTCTTGGTCTTTTATCAGTTTCCAATTTCATTTCTTATTTTTATTTTTTCATTTCCCCCCAAATTATCTGGCGAGGTTGTTTCCTTGAAATATCTCTCTCTCAATATTTGTCACAGAAACCATTTGCCCCCAAAAAGTACTTCTCTATAGACCGCGTTTTCAGAAATGAAGCAGTAGATCGAACCCATCTTGCTGAATTTCACCAGATAGAAGGTATTTATGATTAATACATTTGAACCTTTTGACATTTCTCATTTCTTAAATATATCTATATTAAATTAAATACAATAAAATATATAAAAGTGCGAAGAAAGGAGAAGCTTTCTTTTCTATCTCCTCTTTCATCCACTCTCTTTAATGATTTTTAAAAACATTTTTTTATCTAATTTAGTATATTGTCTTCATTTATTTTGTTTATTCAACTTAATAAATATCAATAAAAAAAGATTTAATATCATAATGTAGACGATAAAACTTATGTTTTCATTAAGAACATTTATTTTAAGATTTATAAATGAAAGTAATATATAATTCAATATTTTAATTTTTTTTTTACTTCTGATCTTGACTCTTGAATGAGTTTGTTTCGGGTTTCCAATAAAATCTTCAATAATTGTAATGGTAGAAATAAGTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTAAATGTGATATGTCCATTTATCCTTGTAAAGTTAAGAATCTTATAACACCTATATTTGGGCTTTTGTTTTGAATTTGTTTTGTGACTATCATTTAGTGTTGATCCTTTTGGATTGGAGTTCCATTTTCGTTGGATTGTCTTTTTGTATGCATTTTTTCATCCATCCTTCTCATTGAAAACTCGGTTTTTCATTTAAACAAAAAGACTGTTCATTCAAATAATTTATAAATGTTATTCTAAAAAACCAATTACAAATGTGATAAAAACTGTGTCAAAACAATGAAGAGACGATTTTATTTATTAGTGTCTATTTAACACGTAACGTTCAATTATGTACTGATTTATATAGATATTTTAATTGGAAAATTTTATTGAACTCATCAAACTTTATTTTTTTCATATAAGCTAAATAGACTTTTACGGACCAGTATACTGAATTTCTCAGTTATATTTCAATAATCAATCGGAAATGTAAATATTTGCCTCTGGTTTTTAGGGTTGATATGTGATCGAGGACTTACTCTTGGAGACTTGATTGGAGTATTGTATGACTTCTTCTCTCGTCTAGGTAACCAATTAATAGTAGCACATTGTATGCCTAAATAATGTTTGAAAGGAAACAATTGGATTATTCAAGTGCATATTCCATTTTCAGGCATGTCCAAGCTACGGTTCAAGCCTGCTTATAACCCATATACCGAACCCAGCATGGAAATTTTCAGGTGACTGAACTACTGAATCACTTTGAAATTGCTGTTGTTATGCTAGATTCGTGCTCTCCATGTGTTTGATGCATTATATTTTTCAGTTATCATGAAGGCTTTAAGAAATGGGTGGAAGTTGGAAATTCAGGAATGTTCAGACCCGAAATGCTGCTACCTATGGGGCTTCCAGAGGATGTCCGTGTTATTGCATGGGGTCTTTCGCTCGAGAGGTAAGATTCTCATGTCTCATTAAATGCCAAATGCATTTGTTTTTTACTTGGTCCCAGAAGTGTGTTGGCCTCGTTCCTAACTTTTATGAGGTTTGCGCTCTGACATTAACGTTTAAATATAGTTTTGGTCATAAAGTTTCCATGAATTTCCTAAGGTCTTTCACTTTTGAAATTGCGGTTTTTAAATGTATGGCCTTGTTTGCACATTTTGTTTTTTGATAATTCTGCTTGTTTTTTTGCTATTTGTTTACAATAGTTTTCACCCTTTCTAAGGAACCATTTGATTTCATATAGTTAATTTCAAATACGAAAAAAGGCTTTTGAATACTACTTTTTAGTTTTCAAAACTTTGGCTTGGATTTTGAAAACATCTCTAAAAGTGGATAATAAAATCGAGAAGCAAAAGTGGTGTTTATAAGCTTAATGTTCAAAAACCAAAAATAAAGTCAAATGATTATCAAACAATATCCAAATTATTTGTTTTTGTTATAGGAACTCCTCACGTTTTTAAACGATATACGATATAACACCATTGATTTTCCAAAGGTCAAATAAAGTTACATCTTTTCTTACTTAAAAGGATTAGTTTAGGTGTTTCAAGAGTTCCAAGGAGCAGAATTGAAAATGTATAGAATATTTAGAATCTATTTACTCTTTTAGATGAATAATAAAATGATGACTATTTTCTCTTGCACCTGTCCATGAACCAGACCAACCATGATCTTGTACGGTGTCGATAACATTCGCGATCTCTTTGGCCACAAGGTATCCCTTATAACTCCGTCTTAACCACAACCTTGGAAAATCCATCATTATAATGTATCTGAATGAATCTGTTTGGTTGCCCCATATTCTTATATTTCTCCAGGTCGATCTTGGTCTAATGAAGAAAAATCCGATATGCCGCCTCGGCATCAATGCAAGTTGAGCGAATCAAGCCCAAGAAAACACCCATTTGATCTTTCATTTTGGTTTATGTTGGCCAGCAGAAGGCTAACTTGATCGTTCAAATTCTCCTTCTTGCTTAAATTGTTAAGTACTCATTCACTTACTTGAAAAGCCTATTGCATCGACACCTCGTTTATTAATGAATTATTGAGCCAATGGTAATTTAATTGACAAAAACATGACCTGCTTGAATTGAGGTTCCATATTCTCTTTATATGTAAGTTTTGACTTGATTAAACTATAATTGAGACGTAGATTGGTAATTGGGTGCAGCTTTTTCTAGCCTACCCTTCTCTTGAGATTGGATTTAATTATCGATGTTTATCGCTTAACTGCCGTAATAGAGGACAACTACTTGTGAACCCTTTTTCTTTGTGTTGACGTAGCCTTTTCGACTTTTTTTTCTTCTATGTTTCCTTGGATTGATTGATAATACCTAATTTGAATGCTTTAAATGCCCTCTCTCTCAGAAACATGTGGTCGAGGTGTCGCACGAGGAAAATCGTGGTTGAATGGAACTGATGTCTTTTGATGTTGAAGGGTGAAATCGAACTGTTCATCAACGTGGATTGTTTAAGTTTTTATTTTGTGTTCGGTCAATACGTAAACTTTTCAAAATTGATTGTTGAACTTATATTACATTTTTAAAATTCAATGACTGCAATAGACTTGAATATGAAA

mRNA sequence

CTGATTTTGCCGTCAAACCAAATTCAGGGCTTCTGTGAGCGTATTTGGCGTAGAGAAGAGATAGAGGAACTGCAGCTGCTCGTGAGCGTTGAAGAAGTGGCCGCAAAGCCATCGAGAAGATGGCGGAGGAAGCAATTCTCGGTTACCTTGAGAAGAACGTCGAAATCTCCGATTCCGGACGGTTCGCCGATGAGTTTAGACTTGATCACAACGAGGTCGTCAACGTCATCAAGAGTCTCAATGGCTTCAGATACGTCGATGCTGAAGACATTAAGAAGGAGAAGTGGATTCTAACTGATGAGGGCGAGACATATACTGCTACAGGATCACCTGAGCTGCAGCTATTCTTGGCAATTCCACCCGAGGGAATTCCAAAGGAAGAACTACAGAAAAAGCTTGGTCCATCTATTTTCAAAATTGGCTGTGCTCAGGCAGCAAAGAACAAATGGGTTGAAATGGGGAAGCAATCGATATCCCGAAAGGTTCAACATGTTGAGGACAAGGTGAAAAATTCACTTCTGCAGATAAAAGATGGAAAGGAAGTTCATGATGATGACGTGAAGGCACTCAAAGCAAGAAAGCTGATTGTATCACAAACATGGAAAGGCTACTCAGTGAAGAAGGGCCCTAGTTATGCTCCTAGAAGGAAAAAGGCTGCTACAGATTTGACACGAGAAAATCTTCAGAGGGGAGACTGGAGAGAACTAGAATTCAAGGAGTATAACTTTAATGCCAAAGGTCAGCCCCTTGAGGGTGGTCATCTTCATCCATTGCTGAAGGTCCGACAGCAATTAAAAAATATTTTTCGTCAAATGGGATTTGAAGAGATGCCTACCAATAACTTTGTCGAGAGCAGCTTCTGGAACTTTGATGCATTATTCCAACCACAACAACACCCTGCCCGTGATGCGCATGATACTTTCTTCTTGCAAGCTCCTGCCAGCACAAGGGAACTTCCTGAAGATTATGTGGAGCGGGTGAAACAGGTCCATGAGATTGGTGGTTTTGGATCCAAAGGATATGGATATGATTGGAAACGAGAGGAAGCAAATAAGAACCTACTGCGAACTCATACAACTGCTGTGTCCTCCAGGATGTTATATTTGCTTGCACAGAAACCATTTGCCCCCAAAAAGTACTTCTCTATAGACCGCGTTTTCAGAAATGAAGCAGTAGATCGAACCCATCTTGCTGAATTTCACCAGATAGAAGGGTTGATATGTGATCGAGGACTTACTCTTGGAGACTTGATTGGAGTATTGTATGACTTCTTCTCTCGTCTAGGCATGTCCAAGCTACGGTTCAAGCCTGCTTATAACCCATATACCGAACCCAGCATGGAAATTTTCAGTTATCATGAAGGCTTTAAGAAATGGGTGGAAGTTGGAAATTCAGGAATGTTCAGACCCGAAATGCTGCTACCTATGGGGCTTCCAGAGGATGTCCGTGTTATTGCATGGGGTCTTTCGCTCGAGAGACCAACCATGATCTTGTACGGTGTCGATAACATTCGCGATCTCTTTGGCCACAAGGTCGATCTTGGTCTAATGAAGAAAAATCCGATATGCCGCCTCGGCATCAATGCAAGTTGAGCGAATCAAGCCCAAGAAAACACCCATTTGATCTTTCATTTTGGTTTATGTTGGCCAGCAGAAGGCTAACTTGATCGTTCAAATTCTCCTTCTTGCTTAAATTAAACATGTGGTCGAGGTGTCGCACGAGGAAAATCGTGGTTGAATGGAACTGATGTCTTTTGATGTTGAAGGGTGAAATCGAACTGTTCATCAACGTGGATTGTTTAAGTTTTTATTTTGTGTTCGGTCAATACGTAAACTTTTCAAAATTGATTGTTGAACTTATATTACATTTTTAAAATTCAATGACTGCAATAGACTTGAATATGAAA

Coding sequence (CDS)

ATGGCGGAGGAAGCAATTCTCGGTTACCTTGAGAAGAACGTCGAAATCTCCGATTCCGGACGGTTCGCCGATGAGTTTAGACTTGATCACAACGAGGTCGTCAACGTCATCAAGAGTCTCAATGGCTTCAGATACGTCGATGCTGAAGACATTAAGAAGGAGAAGTGGATTCTAACTGATGAGGGCGAGACATATACTGCTACAGGATCACCTGAGCTGCAGCTATTCTTGGCAATTCCACCCGAGGGAATTCCAAAGGAAGAACTACAGAAAAAGCTTGGTCCATCTATTTTCAAAATTGGCTGTGCTCAGGCAGCAAAGAACAAATGGGTTGAAATGGGGAAGCAATCGATATCCCGAAAGGTTCAACATGTTGAGGACAAGGTGAAAAATTCACTTCTGCAGATAAAAGATGGAAAGGAAGTTCATGATGATGACGTGAAGGCACTCAAAGCAAGAAAGCTGATTGTATCACAAACATGGAAAGGCTACTCAGTGAAGAAGGGCCCTAGTTATGCTCCTAGAAGGAAAAAGGCTGCTACAGATTTGACACGAGAAAATCTTCAGAGGGGAGACTGGAGAGAACTAGAATTCAAGGAGTATAACTTTAATGCCAAAGGTCAGCCCCTTGAGGGTGGTCATCTTCATCCATTGCTGAAGGTCCGACAGCAATTAAAAAATATTTTTCGTCAAATGGGATTTGAAGAGATGCCTACCAATAACTTTGTCGAGAGCAGCTTCTGGAACTTTGATGCATTATTCCAACCACAACAACACCCTGCCCGTGATGCGCATGATACTTTCTTCTTGCAAGCTCCTGCCAGCACAAGGGAACTTCCTGAAGATTATGTGGAGCGGGTGAAACAGGTCCATGAGATTGGTGGTTTTGGATCCAAAGGATATGGATATGATTGGAAACGAGAGGAAGCAAATAAGAACCTACTGCGAACTCATACAACTGCTGTGTCCTCCAGGATGTTATATTTGCTTGCACAGAAACCATTTGCCCCCAAAAAGTACTTCTCTATAGACCGCGTTTTCAGAAATGAAGCAGTAGATCGAACCCATCTTGCTGAATTTCACCAGATAGAAGGGTTGATATGTGATCGAGGACTTACTCTTGGAGACTTGATTGGAGTATTGTATGACTTCTTCTCTCGTCTAGGCATGTCCAAGCTACGGTTCAAGCCTGCTTATAACCCATATACCGAACCCAGCATGGAAATTTTCAGTTATCATGAAGGCTTTAAGAAATGGGTGGAAGTTGGAAATTCAGGAATGTTCAGACCCGAAATGCTGCTACCTATGGGGCTTCCAGAGGATGTCCGTGTTATTGCATGGGGTCTTTCGCTCGAGAGACCAACCATGATCTTGTACGGTGTCGATAACATTCGCGATCTCTTTGGCCACAAGGTCGATCTTGGTCTAATGAAGAAAAATCCGATATGCCGCCTCGGCATCAATGCAAGTTGA

Protein sequence

MAEEAILGYLEKNVEISDSGRFADEFRLDHNEVVNVIKSLNGFRYVDAEDIKKEKWILTDEGETYTATGSPELQLFLAIPPEGIPKEELQKKLGPSIFKIGCAQAAKNKWVEMGKQSISRKVQHVEDKVKNSLLQIKDGKEVHDDDVKALKARKLIVSQTWKGYSVKKGPSYAPRRKKAATDLTRENLQRGDWRELEFKEYNFNAKGQPLEGGHLHPLLKVRQQLKNIFRQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFLQAPASTRELPEDYVERVKQVHEIGGFGSKGYGYDWKREEANKNLLRTHTTAVSSRMLYLLAQKPFAPKKYFSIDRVFRNEAVDRTHLAEFHQIEGLICDRGLTLGDLIGVLYDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGFKKWVEVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGVDNIRDLFGHKVDLGLMKKNPICRLGINAS

Homology

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BLAST of CmaCh16G010830 vs. ExPASy Swiss-Prot
Match: Q9T034 (Phenylalanine--tRNA ligase alpha subunit, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At4g39280 PE=2 SV=3)

HSP 1 Score: 832.4 bits (2149), Expect = 2.6e-240
Identity = 398/488 (81.56%), Postives = 442/488 (90.57%), Query Frame = 0


Query: 1   MAEEAILGYLEKNVEISDSGRFADEFRLDHNEVVNVIKSLNGFRYVDAEDIKKEKWILTD 60
           MAEEAILG+L+ N +I+DSG+F+ EF +DHNE+VNVIKSL+GFRY+D +DIKKE WILTD
Sbjct: 1   MAEEAILGFLQNNEQITDSGQFSAEFNIDHNELVNVIKSLHGFRYIDVQDIKKETWILTD 60

Query: 61  EGETYTATGSPELQLFLAIPPEG-IPKEELQKKLGPSIFKIGCAQAAKNKWVEMGKQSIS 120
           EG+ Y A GSPE+QLFLA+P EG I K+ELQKKL P++FKIGC+QA KNKWVEMGKQ +S
Sbjct: 61  EGKKYAAEGSPEVQLFLAVPEEGSISKDELQKKLAPAVFKIGCSQAGKNKWVEMGKQ-VS 120

Query: 121 RKVQHVEDKVKNSLLQIKDGKEVHDDDVKALKARKLIVSQTWKGYSVKKGPSYAPRRKKA 180
           RKV+ VEDKVK  LLQI+ GKE   + + +LKARKLIV Q WKGYSVKKGP+YAP RKK 
Sbjct: 121 RKVKDVEDKVKGQLLQIQQGKEFDKESINSLKARKLIVPQIWKGYSVKKGPNYAPERKKV 180

Query: 181 ATDLTRENLQRGDWRELEFKEYNFNAKGQPLEGGHLHPLLKVRQQLKNIFRQMGFEEMPT 240
           ATDLTRENLQ  +W+ELEFKEYNF AKG P++ GHLH LLKVR+Q K+IF QMGFEEMPT
Sbjct: 181 ATDLTRENLQ--NWKELEFKEYNFKAKGAPVDAGHLHALLKVRKQFKDIFVQMGFEEMPT 240

Query: 241 NNFVESSFWNFDALFQPQQHPARDAHDTFFLQAPASTRELPEDYVERVKQVHEIGGFGSK 300
           NN+VESSFWNFDALFQPQQHPARD+HDTFFL+ P++TR LPEDYVERVK+VHE GG+GS+
Sbjct: 241 NNYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTRTLPEDYVERVKRVHESGGYGSR 300

Query: 301 GYGYDWKREEANKNLLRTHTTAVSSRMLYLLAQKPFAPKKYFSIDRVFRNEAVDRTHLAE 360
           GY YDWKREEANKNLLRTHTTAVSSRMLY LAQKPF PKKYFSIDRVFRNEAVDRTHLAE
Sbjct: 301 GYNYDWKREEANKNLLRTHTTAVSSRMLYALAQKPFVPKKYFSIDRVFRNEAVDRTHLAE 360

Query: 361 FHQIEGLICDRGLTLGDLIGVLYDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGFKKW 420
           FHQIEGLICDRGLTLGDLIGVL DFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEG  KW
Sbjct: 361 FHQIEGLICDRGLTLGDLIGVLEDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGLGKW 420

Query: 421 VEVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGVDNIRDLFGHKVDLGLMKK 480
           VE+GNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYG+DNIRDLFGHKVDL L+K+
Sbjct: 421 VEIGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGHKVDLDLIKR 480

Query: 481 NPICRLGI 488
           NPICR+GI
Sbjct: 481 NPICRIGI 485

[Close]

BLAST of CmaCh16G010830 vs. ExPASy Swiss-Prot
Match: Q7SYV0 (Phenylalanine--tRNA ligase alpha subunit B OS=Xenopus laevis OX=8355 GN=farsa-b PE=2 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 3.3e-158
Identity = 281/477 (58.91%), Postives = 342/477 (71.70%), Query Frame = 0


Query: 18  DSGRFADEFRLDHNEVVNVIKSLNGF-RYVDAEDIKKEKWILTDEGETYTATGSPELQLF 77
           D+   A    +DH +VV  +KSL      ++AE    +KW L+ EGE     GS E ++F
Sbjct: 23  DTLELAAVLSVDHQQVVGAVKSLQCLGEIIEAEQRSSKKWELSSEGEEIAQVGSHEARVF 82

Query: 78  LAIPPEGIPKEELQKKLGPSIFKIGCAQAAKNKWVEMGKQS-----ISRKVQHVEDKVKN 137
            ++P EG+ + EL K       K+G ++A  NKW+ + K +     + R V+ +ED VK 
Sbjct: 83  QSLPKEGLLQAELMKL---PFAKVGFSKAMSNKWIRLDKAAAGGPCVYRVVETIEDTVKE 142

Query: 138 SLLQIKDGK--EVHDDDVKALKARKLIVSQTWKGYSVKKGPSYAPRRKKAATDLTRENLQ 197
            L  I  G+  +V++ D   LK RKL+   T K Y V KG  ++    K  TDLT E + 
Sbjct: 143 KLQLILKGRADDVNEKDKNELKKRKLVNEVTVKSYWVTKGSGFSTSITKQETDLTPEMIA 202

Query: 198 RGDWRELEFKEYNFNAKGQPLEGGHLHPLLKVRQQLKNIFRQMGFEEMPTNNFVESSFWN 257
            G WRE +FK YNFNA G   E GHLHPLLKVR Q + IF +MGF EMPTNNF+ESSFWN
Sbjct: 203 SGSWREKQFKGYNFNALGVMPECGHLHPLLKVRTQFRQIFLEMGFTEMPTNNFIESSFWN 262

Query: 258 FDALFQPQQHPARDAHDTFFLQAPASTRELPEDYVERVKQVHEIGGFGSKGYGYDWKREE 317
           FDALFQPQQHPARD HDTFFLQ PA   E P +Y+ERVK+VH  GG+GS+GY YDW   E
Sbjct: 263 FDALFQPQQHPARDQHDTFFLQDPALATEFPMEYLERVKKVHSEGGYGSQGYKYDWSIHE 322

Query: 318 ANKNLLRTHTTAVSSRMLYLLA-QKPFAPKKYFSIDRVFRNEAVDRTHLAEFHQIEGLIC 377
           A KN+LRTHTTAVS+RMLY LA QK F P KYFSIDRVFRNE +D THLAEFHQIEG++ 
Sbjct: 323 AQKNILRTHTTAVSARMLYKLAHQKEFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVA 382

Query: 378 DRGLTLGDLIGVLYDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGFKKWVEVGNSGMF 437
           DRGLTLG+L+GVL +FF +LG++KLRFKPAYNPYTEPSME+FSYHEG KKWVEVGNSG+F
Sbjct: 383 DRGLTLGNLMGVLKEFFHKLGITKLRFKPAYNPYTEPSMEVFSYHEGLKKWVEVGNSGLF 442

Query: 438 RPEMLLPMGLPEDVRVIAWGLSLERPTMILYGVDNIRDLFGHKVDLGLMKKNPICRL 486
           RPE+LLPMGLP DV V+ WGLSLERPTMI YG+ NIR+L GHKV+L ++  +PICRL
Sbjct: 443 RPELLLPMGLPGDVNVLGWGLSLERPTMIRYGIKNIRELVGHKVNLQMVYDSPICRL 496

[Close]

BLAST of CmaCh16G010830 vs. ExPASy Swiss-Prot
Match: Q1JPX3 (Phenylalanine--tRNA ligase alpha subunit OS=Danio rerio OX=7955 GN=farsa PE=2 SV=2)

HSP 1 Score: 559.3 bits (1440), Expect = 4.3e-158
Identity = 281/498 (56.43%), Postives = 354/498 (71.08%), Query Frame = 0


Query: 1   MAEEAILGYLEKNVEISDSGRFADE----FRLDHNEVVNVIKSLNGF-RYVDAEDIKKEK 60
           MA+  +L  L + VE  D G  + +      +DH  VV  +KSL      + AE    + 
Sbjct: 1   MADTGLLEALLQRVEQLDGGVDSQDVSAALGVDHQLVVGAVKSLQALGEVISAEQKSSKH 60

Query: 61  WILTDEGETYTATGSPELQLFLAIPPEGIPKEELQKKLGPSIFKIGCAQAAKNKWVEM-- 120
           W LT EG      GS E ++F AIP EG+P+ +L K       K+G ++A  NKW+ +  
Sbjct: 61  WELTGEGREIAEQGSHEARVFNAIPAEGLPQNQLMKMASG---KVGFSKAMSNKWIRLDK 120

Query: 121 ---GKQSISRKVQHVEDKVKNSLLQIKDGK--EVHDDDVKALKARKLIVSQTWKGYSVKK 180
              G   + R V+ +ED V++ L  +++G+  ++ + +   LK RKL+   T K Y + K
Sbjct: 121 AHEGGPRVFRTVESIEDTVRDKLQLVQNGQSAKLEEKEKNELKKRKLLAEVTVKSYWITK 180

Query: 181 GPSYAPRRKKAATDLTRENLQRGDWRELEFKEYNFNAKGQPLEGGHLHPLLKVRQQLKNI 240
           G S++    K  T+LT E +  G+W+E +FK YNF A G   + GHLHPL+KVR Q + I
Sbjct: 181 GNSFSTTITKQETELTPEMIASGNWKEKKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQI 240

Query: 241 FRQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFLQAPASTRELPEDYVERVK 300
           F +MGF EMPTNNF+ESSFWNFD+LFQPQQHPARD HDTFF+  PA   E P DY+ERVK
Sbjct: 241 FLEMGFTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFISDPALAHEFPRDYLERVK 300

Query: 301 QVHEIGGFGSKGYGYDWKREEANKNLLRTHTTAVSSRMLYLLA-QKPFAPKKYFSIDRVF 360
           +VH  GG+GS+GY YDWK EEA KNLLRTHTTAVS+RMLY LA Q+ F P KYFSIDRVF
Sbjct: 301 KVHSEGGYGSQGYKYDWKIEEAQKNLLRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVF 360

Query: 361 RNEAVDRTHLAEFHQIEGLICDRGLTLGDLIGVLYDFFSRLGMSKLRFKPAYNPYTEPSM 420
           RNE +D THLAEFHQIEG++ D GLTLG+L+GVL+ FF++LG++KLRFKPAYNPYTEPSM
Sbjct: 361 RNETLDATHLAEFHQIEGVVADYGLTLGNLMGVLHQFFTKLGITKLRFKPAYNPYTEPSM 420

Query: 421 EIFSYHEGFKKWVEVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGVDNIRDL 480
           E+FSYHEG KKWVEVGNSG+FRPEMLLPMGLPE V VIAWGLSLERPTMI YG++NIR+L
Sbjct: 421 EVFSYHEGLKKWVEVGNSGVFRPEMLLPMGLPEGVSVIAWGLSLERPTMIKYGINNIREL 480

Query: 481 FGHKVDLGLMKKNPICRL 486
            GHKV+L ++  +PICRL
Sbjct: 481 VGHKVNLQMVYDSPICRL 495

[Close]

BLAST of CmaCh16G010830 vs. ExPASy Swiss-Prot
Match: Q6AZG6 (Phenylalanine--tRNA ligase alpha subunit A OS=Xenopus laevis OX=8355 GN=farsa-a PE=2 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 2.8e-157
Identity = 281/477 (58.91%), Postives = 341/477 (71.49%), Query Frame = 0


Query: 18  DSGRFADEFRLDHNEVVNVIKSLNGF-RYVDAEDIKKEKWILTDEGETYTATGSPELQLF 77
           DS   A    ++H +VV  +KSL      + AE    +KW L+ EGE     GS E ++F
Sbjct: 23  DSLELAALLGVEHQQVVGAVKSLQCLGEIIQAEQRSSKKWELSSEGEEIGREGSHEARVF 82

Query: 78  LAIPPEGIPKEELQKKLGPSIFKIGCAQAAKNKWVEMGKQS-----ISRKVQHVEDKVKN 137
             +P EG+ + +L K+      K+G ++A  NKW+ + K +     I R V  +ED VK 
Sbjct: 83  QTLPKEGLLQAQLMKQ---PFSKVGFSKAMSNKWIRLDKAAEGGPRIYRVVDSIEDTVKE 142

Query: 138 SLLQIKDGK--EVHDDDVKALKARKLIVSQTWKGYSVKKGPSYAPRRKKAATDLTRENLQ 197
            L  I  G+  +V++ D   LK RKL+   T K Y V KG  ++    K  TDLT E + 
Sbjct: 143 KLQLILKGRADDVNEKDRNELKKRKLVNEVTVKSYWVTKGSGFSTSITKQETDLTPEMIA 202

Query: 198 RGDWRELEFKEYNFNAKGQPLEGGHLHPLLKVRQQLKNIFRQMGFEEMPTNNFVESSFWN 257
            G WRE +FK YNF+A G   E GHLHPLLKVR Q + IF +MGF EMPTNNF+ESSFWN
Sbjct: 203 SGSWREKQFKGYNFDALGVMPECGHLHPLLKVRTQFRQIFLEMGFTEMPTNNFIESSFWN 262

Query: 258 FDALFQPQQHPARDAHDTFFLQAPASTRELPEDYVERVKQVHEIGGFGSKGYGYDWKREE 317
           FDALFQPQQHPARD HDTFFLQ PA   E P +Y+ERVK+VH  GG+GS+GY YDW   E
Sbjct: 263 FDALFQPQQHPARDQHDTFFLQDPALATEFPMEYLERVKKVHSEGGYGSQGYKYDWSIHE 322

Query: 318 ANKNLLRTHTTAVSSRMLYLLA-QKPFAPKKYFSIDRVFRNEAVDRTHLAEFHQIEGLIC 377
           A KN+LRTHTTAVS+RMLY LA QK F P KYFSIDRVFRNE +D THLAEFHQIEG++ 
Sbjct: 323 AQKNILRTHTTAVSARMLYKLALQKDFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVA 382

Query: 378 DRGLTLGDLIGVLYDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGFKKWVEVGNSGMF 437
           DRGLTLG+L+GVL +FF +LG++KLRFKPAYNPYTEPSME+FSYHEG KKWVEVGNSG+F
Sbjct: 383 DRGLTLGNLMGVLKEFFHKLGITKLRFKPAYNPYTEPSMEVFSYHEGLKKWVEVGNSGLF 442

Query: 438 RPEMLLPMGLPEDVRVIAWGLSLERPTMILYGVDNIRDLFGHKVDLGLMKKNPICRL 486
           RPE+LLPMGLPEDV V+ WGLSLERPTMI YG+ NIR+L GHKV+L ++  +PICRL
Sbjct: 443 RPELLLPMGLPEDVNVLGWGLSLERPTMIRYGIKNIRELVGHKVNLQMVYDSPICRL 496

[Close]

BLAST of CmaCh16G010830 vs. ExPASy Swiss-Prot
Match: Q505J8 (Phenylalanine--tRNA ligase alpha subunit OS=Rattus norvegicus OX=10116 GN=Farsa PE=1 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 1.5e-155
Identity = 277/500 (55.40%), Postives = 356/500 (71.20%), Query Frame = 0


Query: 1   MAEEAILGYLEKNVEISDSG----RFADEFRLDHNEVVNVIKSLNGFRYVDAEDIKKEK- 60
           MA+  +L  L + +E++D G      A +  ++H  VV  +KSL     V   +++  K 
Sbjct: 1   MADNPVLEQLLRRLEVADGGLDSAELATQLGVEHQAVVGAVKSLQALGEVIEAELRSTKC 60

Query: 61  WILTDEGETYTATGSPELQLFLAIPPEGIPKEELQKKLGPSIFKIGCAQAAKNKWVEMGK 120
           W LT EGE     GS E ++F +IP EG+ + EL +   PS  K+G ++A  NKW+ + K
Sbjct: 61  WELTTEGEEIAREGSHEARVFRSIPLEGLVQSELMQL--PS-GKVGFSKAMSNKWIRVDK 120

Query: 121 QS-----ISRKVQHVEDKVKNSLLQIKDG--KEVHDDDVKALKARKLIVSQTWKGYSVKK 180
            +     + R V  +ED+V+  L Q++ G  +++ + +   L+ RKL+     K Y V K
Sbjct: 121 SAADGPRVFRVVDSIEDEVQRRLQQVQAGQAEKLAEKERNELRKRKLLTEVILKTYWVSK 180

Query: 181 GPSYAPRRKKAATDLTRENLQRGDWRELEFKEYNFNAKGQPLEGGHLHPLLKVRQQLKNI 240
           G  ++    K   +L+ E +  G WR+  FK YNF+A+G   + GHLHPLLKVR Q + I
Sbjct: 181 GKGFSTSVSKQEAELSPEMISSGSWRDRPFKPYNFSARGVLPDSGHLHPLLKVRSQFRQI 240

Query: 241 FRQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFLQAPASTRELPEDYVERVK 300
           F +MGF EMPT+NF+ESSFWNFDALFQPQQHPARD HDTFFL+ PA   +LP DYV+RVK
Sbjct: 241 FLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVK 300

Query: 301 QVHEIGGFGSKGYGYDWKREEANKNLLRTHTTAVSSRMLYLLAQ-KPFAPKKYFSIDRVF 360
           + H  GG+GS+GY Y WK EEA KNLLRTHTTA S+R LY LAQ KPF P KYFSIDRVF
Sbjct: 301 RTHSQGGYGSQGYKYTWKLEEARKNLLRTHTTAASARALYRLAQKKPFTPAKYFSIDRVF 360

Query: 361 RNEAVDRTHLAEFHQIEGLICDRGLTLGDLIGVLYDFFSRLGMSKLRFKPAYNPYTEPSM 420
           RNE +D THLAEFHQIEG+I D GLTLG L+GVL +FF++LG+++LRFKPAYNPYTEPSM
Sbjct: 361 RNETLDATHLAEFHQIEGVIADHGLTLGHLMGVLREFFTKLGITQLRFKPAYNPYTEPSM 420

Query: 421 EIFSYHEGFKKWVEVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGVDNIRDL 480
           E+FSYH+G KKWVEVGNSG+FRPEMLLPMGLPE+V VIAWGLSLERPTMI YG++NIR+L
Sbjct: 421 EVFSYHQGLKKWVEVGNSGVFRPEMLLPMGLPENVSVIAWGLSLERPTMIKYGINNIREL 480

Query: 481 FGHKVDLGLMKKNPICRLGI 488
            GHKV+L ++  +P+CRL I
Sbjct: 481 VGHKVNLQMVYDSPVCRLDI 497

[Close]

BLAST of CmaCh16G010830 vs. TAIR 10
Match: AT4G39280.1 (phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative )

HSP 1 Score: 832.4 bits (2149), Expect = 1.9e-241
Identity = 398/488 (81.56%), Postives = 442/488 (90.57%), Query Frame = 0


Query: 1   MAEEAILGYLEKNVEISDSGRFADEFRLDHNEVVNVIKSLNGFRYVDAEDIKKEKWILTD 60
           MAEEAILG+L+ N +I+DSG+F+ EF +DHNE+VNVIKSL+GFRY+D +DIKKE WILTD
Sbjct: 1   MAEEAILGFLQNNEQITDSGQFSAEFNIDHNELVNVIKSLHGFRYIDVQDIKKETWILTD 60

Query: 61  EGETYTATGSPELQLFLAIPPEG-IPKEELQKKLGPSIFKIGCAQAAKNKWVEMGKQSIS 120
           EG+ Y A GSPE+QLFLA+P EG I K+ELQKKL P++FKIGC+QA KNKWVEMGKQ +S
Sbjct: 61  EGKKYAAEGSPEVQLFLAVPEEGSISKDELQKKLAPAVFKIGCSQAGKNKWVEMGKQ-VS 120

Query: 121 RKVQHVEDKVKNSLLQIKDGKEVHDDDVKALKARKLIVSQTWKGYSVKKGPSYAPRRKKA 180
           RKV+ VEDKVK  LLQI+ GKE   + + +LKARKLIV Q WKGYSVKKGP+YAP RKK 
Sbjct: 121 RKVKDVEDKVKGQLLQIQQGKEFDKESINSLKARKLIVPQIWKGYSVKKGPNYAPERKKV 180

Query: 181 ATDLTRENLQRGDWRELEFKEYNFNAKGQPLEGGHLHPLLKVRQQLKNIFRQMGFEEMPT 240
           ATDLTRENLQ  +W+ELEFKEYNF AKG P++ GHLH LLKVR+Q K+IF QMGFEEMPT
Sbjct: 181 ATDLTRENLQ--NWKELEFKEYNFKAKGAPVDAGHLHALLKVRKQFKDIFVQMGFEEMPT 240

Query: 241 NNFVESSFWNFDALFQPQQHPARDAHDTFFLQAPASTRELPEDYVERVKQVHEIGGFGSK 300
           NN+VESSFWNFDALFQPQQHPARD+HDTFFL+ P++TR LPEDYVERVK+VHE GG+GS+
Sbjct: 241 NNYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTRTLPEDYVERVKRVHESGGYGSR 300

Query: 301 GYGYDWKREEANKNLLRTHTTAVSSRMLYLLAQKPFAPKKYFSIDRVFRNEAVDRTHLAE 360
           GY YDWKREEANKNLLRTHTTAVSSRMLY LAQKPF PKKYFSIDRVFRNEAVDRTHLAE
Sbjct: 301 GYNYDWKREEANKNLLRTHTTAVSSRMLYALAQKPFVPKKYFSIDRVFRNEAVDRTHLAE 360

Query: 361 FHQIEGLICDRGLTLGDLIGVLYDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGFKKW 420
           FHQIEGLICDRGLTLGDLIGVL DFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEG  KW
Sbjct: 361 FHQIEGLICDRGLTLGDLIGVLEDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGLGKW 420

Query: 421 VEVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGVDNIRDLFGHKVDLGLMKK 480
           VE+GNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYG+DNIRDLFGHKVDL L+K+
Sbjct: 421 VEIGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGHKVDLDLIKR 480

Query: 481 NPICRLGI 488
           NPICR+GI
Sbjct: 481 NPICRIGI 485

[Close]

BLAST of CmaCh16G010830 vs. TAIR 10
Match: AT4G39280.2 (phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative )

HSP 1 Score: 832.0 bits (2148), Expect = 2.4e-241
Identity = 398/488 (81.56%), Postives = 442/488 (90.57%), Query Frame = 0


Query: 1   MAEEAILGYLEKNVEISDSGRFADEFRLDHNEVVNVIKSLNGFRYVDAEDIKKEKWILTD 60
           MAEEAILG+L+ N +I+DSG+F+ EF +DHNE+VNVIKSL+GFRY+D +DIKKE WILTD
Sbjct: 1   MAEEAILGFLQNNEQITDSGQFSAEFNIDHNELVNVIKSLHGFRYIDVQDIKKETWILTD 60

Query: 61  EGETYTATGSPELQLFLAIPPEG-IPKEELQKKLGPSIFKIGCAQAAKNKWVEMGKQSIS 120
           EG+ Y A GSPE+QLFLA+P EG I K+ELQKKL P++FKIGC+QA KNKWVEMGKQ +S
Sbjct: 61  EGKKYAAEGSPEVQLFLAVPEEGSISKDELQKKLAPAVFKIGCSQAGKNKWVEMGKQ-VS 120

Query: 121 RKVQHVEDKVKNSLLQIKDGKEVHDDDVKALKARKLIVSQTWKGYSVKKGPSYAPRRKKA 180
           RKV+ VEDKVK  LLQI+ GKE   + + +LKARKLIV Q WKGYSVKKGP+YAP RKK 
Sbjct: 121 RKVKDVEDKVKGQLLQIQQGKEFDKESINSLKARKLIVPQIWKGYSVKKGPNYAPERKKV 180

Query: 181 ATDLTRENLQRGDWRELEFKEYNFNAKGQPLEGGHLHPLLKVRQQLKNIFRQMGFEEMPT 240
           ATDLTRENLQ  +W+ELEFKEYNF AKG P++ GHLH LLKVR+Q K+IF QMGFEEMPT
Sbjct: 181 ATDLTRENLQ--NWKELEFKEYNFKAKGAPVDAGHLHALLKVRKQFKDIFVQMGFEEMPT 240

Query: 241 NNFVESSFWNFDALFQPQQHPARDAHDTFFLQAPASTRELPEDYVERVKQVHEIGGFGSK 300
           NN+VESSFWNFDALFQPQQHPARD+HDTFFL+ P++TR LPEDYVERVK+VHE GG+GS+
Sbjct: 241 NNYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTRTLPEDYVERVKRVHESGGYGSR 300

Query: 301 GYGYDWKREEANKNLLRTHTTAVSSRMLYLLAQKPFAPKKYFSIDRVFRNEAVDRTHLAE 360
           GY YDWKREEANKNLLRTHTTAVSSRMLY LAQKPF PKKYFSIDRVFRNEAVDRTHLAE
Sbjct: 301 GYNYDWKREEANKNLLRTHTTAVSSRMLYALAQKPFVPKKYFSIDRVFRNEAVDRTHLAE 360

Query: 361 FHQIEGLICDRGLTLGDLIGVLYDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGFKKW 420
           FHQIEGLICDRGLTLGDLIGVL DFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEG  KW
Sbjct: 361 FHQIEGLICDRGLTLGDLIGVLEDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGLGKW 420

Query: 421 VEVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGVDNIRDLFGHKVDLGLMKK 480
           VE+GNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYG+DNIRDLFGHKVDL L+K+
Sbjct: 421 VEIGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGHKVDLDLIKR 480

Query: 481 NPICRLGI 488
           NPICR+GI
Sbjct: 481 NPICRVGI 485

[Close]

BLAST of CmaCh16G010830 vs. TAIR 10
Match: AT3G58140.1 (phenylalanyl-tRNA synthetase class IIc family protein )

HSP 1 Score: 67.4 bits (163), Expect = 3.7e-11
Identity = 65/299 (21.74%), Postives = 119/299 (39.80%), Query Frame = 0


Query: 183 LTRENLQRGDWRELEFKEYNFNAKGQPLEGGHLHPLLKVRQQLKNIF---RQMGFEEMPT 242
           + R ++ R D       +  F+  G  L     HP+  ++  + + F       FE+   
Sbjct: 62  IARNDVVREDDPTNNVPDSIFSKLGMQLHRRDKHPIGILKNAIYDYFDSNYSNKFEKFED 121

Query: 243 NNFVESSFWNFDALFQPQQHPARDAHDTFFLQAPASTRELPEDYVERVKQVHEIGGFGSK 302
            + + ++  NFD +  P  H +R  +DT+++                             
Sbjct: 122 LSPIVTTKQNFDDVLVPADHVSRSLNDTYYVD---------------------------- 181

Query: 303 GYGYDWKREEANKNLLRTHTTAVSSRMLYLLAQKPFAPKKYFSIDRVFRNEAVDRTHLAE 362
                      ++ +LR HT+A  + +L           ++     V+R +++D TH   
Sbjct: 182 -----------SQTVLRCHTSAHQAELLRK------GHSRFLVTGDVYRRDSIDSTHYPV 241

Query: 363 FHQIEGLIC-----------DRGLTLGDLIGVLYDFFSR--LGMSKLRFKPAYNPYTEPS 422
           FHQ+EG              D  L   + +    +  +R   G  ++R+   Y P+T PS
Sbjct: 242 FHQMEGFCVFSPEDWNGSGKDSTLYAAEDLKKCLEGLARHLFGSVEMRWVDTYFPFTNPS 301

Query: 423 MEIFSYHEGFKKWVEVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGVDNIR 466
            E+  Y +  + W+EV   G+    +L   GL  +V   A+GL LER  M+L+ + +IR
Sbjct: 302 FELEIYFK--EDWLEVLGCGVTEQVILKQSGLENNV-AWAFGLGLERLAMVLFDIPDIR 312

The following BLAST results are available for this feature:

BLAST of CmaCh16G010830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T034	2.6e-240	81.56	Phenylalanine--tRNA ligase alpha subunit, cytoplasmic OS=Arabidopsis thaliana OX...	[more]
Q7SYV0	3.3e-158	58.91	Phenylalanine--tRNA ligase alpha subunit B OS=Xenopus laevis OX=8355 GN=farsa-b ...	[more]
Q1JPX3	4.3e-158	56.43	Phenylalanine--tRNA ligase alpha subunit OS=Danio rerio OX=7955 GN=farsa PE=2 SV...	[more]
Q6AZG6	2.8e-157	58.91	Phenylalanine--tRNA ligase alpha subunit A OS=Xenopus laevis OX=8355 GN=farsa-a ...	[more]
Q505J8	1.5e-155	55.40	Phenylalanine--tRNA ligase alpha subunit OS=Rattus norvegicus OX=10116 GN=Farsa ...	[more]

BLAST of CmaCh16G010830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39280.1	1.9e-241	81.56	phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative	[more]
AT4G39280.2	2.4e-241	81.56	phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative	[more]
AT3G58140.1	3.7e-11	21.74	phenylalanyl-tRNA synthetase class IIc family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.1370.240		coord: 7..199 e-value: 1.3E-65 score: 222.4
None	No IPR available	GENE3D	3.30.930.10	Bira Bifunctional Protein; Domain 2	coord: 216..488 e-value: 8.5E-117 score: 391.2
None	No IPR available	GENE3D	1.10.10.2330		coord: 71..125 e-value: 1.3E-65 score: 222.4
None	No IPR available	GENE3D	1.10.10.2320		coord: 58..156 e-value: 1.3E-65 score: 222.4
None	No IPR available	PANTHER	PTHR11538	PHENYLALANYL-TRNA SYNTHETASE	coord: 3..486
None	No IPR available	PANTHER	PTHR11538:SF79	PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT	coord: 3..486
None	No IPR available	CDD	cd00496	PheRS_alpha_core	coord: 216..473 e-value: 2.6356E-112 score: 329.121
None	No IPR available	SUPERFAMILY	55681	Class II aaRS and biotin synthetases	coord: 201..473
IPR002319	Phenylalanyl-tRNA synthetase	PFAM	PF01409	tRNA-synt_2d	coord: 201..473 e-value: 1.8E-93 score: 312.5
IPR040725	PheRS, DNA binding domain 3	PFAM	PF18553	PheRS_DBD3	coord: 70..125 e-value: 5.2E-16 score: 58.7
IPR040724	PheRS, DNA binding domain 1	PFAM	PF18552	PheRS_DBD1	coord: 3..56 e-value: 1.6E-8 score: 34.2
IPR004529	Phenylalanyl-tRNA synthetase, class IIc, alpha subunit	TIGRFAM	TIGR00468	TIGR00468	coord: 162..478 e-value: 9.4E-106 score: 351.6
IPR006195	Aminoacyl-tRNA synthetase, class II	PROSITE	PS50862	AA_TRNA_LIGASE_II	coord: 220..481 score: 19.0109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G010830.1	CmaCh16G010830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006432	phenylalanyl-tRNA aminoacylation
biological_process	GO:0043039	tRNA aminoacylation
cellular_component	GO:0009328	phenylalanine-tRNA ligase complex
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004826	phenylalanine-tRNA ligase activity
molecular_function	GO:0000049	tRNA binding
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0000166	nucleotide binding