CmaCh16G010420 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G010420
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Glycine cleavage T-protein family
Location	Cma_Chr16: 8008650 .. 8011362 (+)
RNA-Seq Expression	CmaCh16G010420
Synteny	CmaCh16G010420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAACATTGCTTCACTGAAGACTTTCATCAAACACACGCCGAACACAAGCTCAGATCTATCCGTAGTGATGCAGTTTGGAGATACGTGCCGGCAAGTTCATACCTCTTCTCTAACACGCGTCACGTCTTCCACTTCGATCCCCCACAGTTCCTATGTTCCTCTGATTTAAGCCCTCACAATTTGCTCAATAACCCCACAAAATGCACCGTTCATTACCCATTTTCAAGTTCTGCAAATTACTCGCCAATGGATTCCCAATCCGCCGGGGGTTTTGCTCATCGGACACCCGATCCCATTTCAGCCACGCCGCTGGGTCTATGGCTGCCCATTTGAAGTCTCGCTCTGTCATTCGGTTTCGGGGTCCCGACACCGTCAAATTCCTTCACGGCCTATTGACTAATGATGTGCGGCGGTTTGGGGAACCTCCGGGTGAGAAAACGTCGTCGTTGCCCACCCCCAATTTGGCGCCGGTGTCGGTTACGCCTATGTATGCGGCGATGTTGACGCCGCAGGGGAGGTTTTTGTATGATTTGTTTTTGTACAGGCCGCCTAGGTCTGAAGAGAAGCTTGATCGGACTGGCTCTGGGCCTGGTCCGGCTTCGGATGAGTCGGTGGAGTTGATGGCTGATGTGGATTCTTCTGTGTTGGATGAGCTTTTGGTGACGCTGAAGAAGTGAGCTCTTTGTTAGTTCCTTTGCTTAAACTGTTCTTTGTTTTGGTTCAAATTGTTGGTTTGTTTGCTCCTTTTTGGTGTCAGTGATGCAATTTTGATTGTGTTGGGATTAATTGAATGATACCCTTTTAGAAATGCAGAGCTGTGATTGAATTGCTAAGTTTCTGGTCCTCCTTGAGTTTGATCATGTTTACATACAAATTTCTTATGCAATGATCAGTACCCATCATGATAGATATCATTTAAGTTGAACTTGTAGCTGGATACACTGGGATTCTACTAGACCCAAGTTTGGCTTGTTTGAGTATTCAAATCATGTTCATCAGGGTAGACTGGATATCATGTTTTCAAATAGATGTAGGTTCTTGGAAAATGACAATGAAAGCTTGACTGAAGCTTAGGCATTGAAATTTAGGACCAAAACAAGATATGAACAAGCAAGAAAGTTTAATAGGATTTAAACCTATATTGTAACGACTAATCGTCGTCCTATAAACCTCCTTCCGTTACTGTTCTACAGATACCGTTTAAGGTCAAAGGTTGATATTGAGAATGTGGCAGAGGAGTTTTCTTGCTGGCAACGCTTTGGTAAAAAGCTCTCTAGAAAAGCTTCCTCTGCAGAGGAACCAGACGCTGCCAGTGTTGGTTGGGGTGCTAGTGTTGATCCTACAGCAATGTCGGCTTCGCGTGGGGAAGACATTGGCTGGCAATGGTTTCAAGATCCAAGGTTGGACTGCCTTGGTTTCAGAGGCGTTTTTCCATCGAACGGGACACGTATGTTTCTCTCATGCTCTGAAGGGTCTTATGAGTTTTTAGTACCATGAAGTTTGAGTGGATTATTCATTCATCATGTATGGTTTCTTGCTAAGAATCTTCTGATAGTGTTCTTCTGGTTGTATTTGTTAAAGCTCCTCTTGTTGAGGCGGATAAAGAAACCGATGAAGATAATTATGTAATGTGGAGACTAGAGAAGGGCGTTGCAGAAGGTTCAACTGAGATTCAAAAAGGTTCATTTCGATTTCTTAATACTGGTGGCCAACGAGTCATTCCAATGCTCTAGAACTCTGTATCTTGCAATTTATAAACCGAGCTCTTTCTGGTGTTACTCTGCTAGTCGATAGAATATACGATACACCGTTCTCTTGTTCATTGTATTTGATGGGTTCTTTCTGTTTTGGTCTGTGGTTTGATTTGTTTCCTGCTGCTAAGTTGTGACGAGTGGCTTGTGAATCTCGAATTCTTATGCTCTTTTGGTTTGGATCTTCTTTAATCCTTGTAAAGGTGAGGCGATCCCCCTTGAATACAACCTGGTGGGTCTAAATGCAATAAGTTTTGACAAAGGGTGCTATGTCGGGCAAGAGCTTGTAGCTCGTACACACCACCGTGGAGTTATCCGAAAACGTGTAGTTCCTTTGAGGTTTCTAAATGACAGAGGGGAAGGTAACCGATCTTTCACGAACTGTTTCGAGCTTTTTCTAGCTTGAATCTCAATTTCACAACCTTGTTAAGTAAGCAACTCCTTGATTATCTTTCAGATGTAGAGCAGAATGTATCAACTGGATCGGAAGTAATCAACTCCGCATCCAGCAAGAAAGTAGGTAACGTGATTGCTGCGGTCGGGTGCCGTGGACTCGGTCTCTTGCGCTTGGAGGAAGCGTTCAGAGGATCACGAAGTTTGGCCATTCAAGGTCTCGAGGGTGTGACGGTTGAAGCCATTAGACCGGATTGGTGGCCGGCTGAATGGTATCAAGAGCATCAACAACACAATACTGCTGTTGCATAGAGTTTTAAGGAACTGATACTCGGTTAGATAAATCCTGCATAGCTTTCAGGCATGGTTGTATTTATTGTTAGCCACGTTACTAATAATTCGGAAGTATGAACCTTAAGAACTTTCAATATTACCTCTCGATTTTGAATTATATTTCTATTCAAACCCAAATCTTATTTCTTTAAAATTGAGATGGGATTCAAATTTTGTTTGGCACGCTTATGTATGGGACAAGATTCCTGCACGAACATCATTCTTATTCAGATGA

mRNA sequence

GAAACATTGCTTCACTGAAGACTTTCATCAAACACACGCCGAACACAAGCTCAGATCTATCCGTAGTGATGCAGTTTGGAGATACGTGCCGGCAAGTTCATACCTCTTCTCTAACACGCGTCACGTCTTCCACTTCGATCCCCCACAGTTCCTATGTTCCTCTGATTTAAGCCCTCACAATTTGCTCAATAACCCCACAAAATGCACCGTTCATTACCCATTTTCAAGTTCTGCAAATTACTCGCCAATGGATTCCCAATCCGCCGGGGGTTTTGCTCATCGGACACCCGATCCCATTTCAGCCACGCCGCTGGGTCTATGGCTGCCCATTTGAAGTCTCGCTCTGTCATTCGGTTTCGGGGTCCCGACACCGTCAAATTCCTTCACGGCCTATTGACTAATGATGTGCGGCGGTTTGGGGAACCTCCGGGTGAGAAAACGTCGTCGTTGCCCACCCCCAATTTGGCGCCGGTGTCGGTTACGCCTATGTATGCGGCGATGTTGACGCCGCAGGGGAGGTTTTTGTATGATTTGTTTTTGTACAGGCCGCCTAGGTCTGAAGAGAAGCTTGATCGGACTGGCTCTGGGCCTGGTCCGGCTTCGGATGAGTCGGTGGAGTTGATGGCTGATGTGGATTCTTCTGTGTTGGATGAGCTTTTGGTGACGCTGAAGAAATACCGTTTAAGGTCAAAGGTTGATATTGAGAATGTGGCAGAGGAGTTTTCTTGCTGGCAACGCTTTGGTAAAAAGCTCTCTAGAAAAGCTTCCTCTGCAGAGGAACCAGACGCTGCCAGTGTTGGTTGGGGTGCTAGTGTTGATCCTACAGCAATGTCGGCTTCGCGTGGGGAAGACATTGGCTGGCAATGGTTTCAAGATCCAAGGTTGGACTGCCTTGGTTTCAGAGGCGTTTTTCCATCGAACGGGACACCTCCTCTTGTTGAGGCGGATAAAGAAACCGATGAAGATAATTATGTAATGTGGAGACTAGAGAAGGGCGTTGCAGAAGGTTCAACTGAGATTCAAAAAGGTGAGGCGATCCCCCTTGAATACAACCTGGTGGGTCTAAATGCAATAAGTTTTGACAAAGGGTGCTATGTCGGGCAAGAGCTTGTAGCTCGTACACACCACCGTGGAGTTATCCGAAAACGTGTAGTTCCTTTGAGGTTTCTAAATGACAGAGGGGAAGATGTAGAGCAGAATGTATCAACTGGATCGGAAGTAATCAACTCCGCATCCAGCAAGAAAGTAGGTAACGTGATTGCTGCGGTCGGGTGCCGTGGACTCGGTCTCTTGCGCTTGGAGGAAGCGTTCAGAGGATCACGAAGTTTGGCCATTCAAGGTCTCGAGGGTGTGACGGTTGAAGCCATTAGACCGGATTGGTGGCCGGCTGAATGGTATCAAGAGCATCAACAACACAATACTGCTGTTGCATAGAGTTTTAAGGAACTGATACTCGGTTAGATAAATCCTGCATAGCTTTCAGGCATGGTTGTATTTATTGTTAGCCACGTTACTAATAATTCGGAAGTATGAACCTTAAGAACTTTCAATATTACCTCTCGATTTTGAATTATATTTCTATTCAAACCCAAATCTTATTTCTTTAAAATTGAGATGGGATTCAAATTTTGTTTGGCACGCTTATGTATGGGACAAGATTCCTGCACGAACATCATTCTTATTCAGATGA

Coding sequence (CDS)

ATGCACCGTTCATTACCCATTTTCAAGTTCTGCAAATTACTCGCCAATGGATTCCCAATCCGCCGGGGGTTTTGCTCATCGGACACCCGATCCCATTTCAGCCACGCCGCTGGGTCTATGGCTGCCCATTTGAAGTCTCGCTCTGTCATTCGGTTTCGGGGTCCCGACACCGTCAAATTCCTTCACGGCCTATTGACTAATGATGTGCGGCGGTTTGGGGAACCTCCGGGTGAGAAAACGTCGTCGTTGCCCACCCCCAATTTGGCGCCGGTGTCGGTTACGCCTATGTATGCGGCGATGTTGACGCCGCAGGGGAGGTTTTTGTATGATTTGTTTTTGTACAGGCCGCCTAGGTCTGAAGAGAAGCTTGATCGGACTGGCTCTGGGCCTGGTCCGGCTTCGGATGAGTCGGTGGAGTTGATGGCTGATGTGGATTCTTCTGTGTTGGATGAGCTTTTGGTGACGCTGAAGAAATACCGTTTAAGGTCAAAGGTTGATATTGAGAATGTGGCAGAGGAGTTTTCTTGCTGGCAACGCTTTGGTAAAAAGCTCTCTAGAAAAGCTTCCTCTGCAGAGGAACCAGACGCTGCCAGTGTTGGTTGGGGTGCTAGTGTTGATCCTACAGCAATGTCGGCTTCGCGTGGGGAAGACATTGGCTGGCAATGGTTTCAAGATCCAAGGTTGGACTGCCTTGGTTTCAGAGGCGTTTTTCCATCGAACGGGACACCTCCTCTTGTTGAGGCGGATAAAGAAACCGATGAAGATAATTATGTAATGTGGAGACTAGAGAAGGGCGTTGCAGAAGGTTCAACTGAGATTCAAAAAGGTGAGGCGATCCCCCTTGAATACAACCTGGTGGGTCTAAATGCAATAAGTTTTGACAAAGGGTGCTATGTCGGGCAAGAGCTTGTAGCTCGTACACACCACCGTGGAGTTATCCGAAAACGTGTAGTTCCTTTGAGGTTTCTAAATGACAGAGGGGAAGATGTAGAGCAGAATGTATCAACTGGATCGGAAGTAATCAACTCCGCATCCAGCAAGAAAGTAGGTAACGTGATTGCTGCGGTCGGGTGCCGTGGACTCGGTCTCTTGCGCTTGGAGGAAGCGTTCAGAGGATCACGAAGTTTGGCCATTCAAGGTCTCGAGGGTGTGACGGTTGAAGCCATTAGACCGGATTGGTGGCCGGCTGAATGGTATCAAGAGCATCAACAACACAATACTGCTGTTGCATAG

Protein sequence

MHRSLPIFKFCKLLANGFPIRRGFCSSDTRSHFSHAAGSMAAHLKSRSVIRFRGPDTVKFLHGLLTNDVRRFGEPPGEKTSSLPTPNLAPVSVTPMYAAMLTPQGRFLYDLFLYRPPRSEEKLDRTGSGPGPASDESVELMADVDSSVLDELLVTLKKYRLRSKVDIENVAEEFSCWQRFGKKLSRKASSAEEPDAASVGWGASVDPTAMSASRGEDIGWQWFQDPRLDCLGFRGVFPSNGTPPLVEADKETDEDNYVMWRLEKGVAEGSTEIQKGEAIPLEYNLVGLNAISFDKGCYVGQELVARTHHRGVIRKRVVPLRFLNDRGEDVEQNVSTGSEVINSASSKKVGNVIAAVGCRGLGLLRLEEAFRGSRSLAIQGLEGVTVEAIRPDWWPAEWYQEHQQHNTAVA

Homology

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BLAST of CmaCh16G010420 vs. ExPASy Swiss-Prot
Match: Q8L733 (Putative transferase At4g12130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g12130 PE=1 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 2.4e-146
Identity = 249/369 (67.48%), Postives = 297/369 (80.49%), Query Frame = 0


Query: 37  AGSMAAHLKSRSVIRFRGPDTVKFLHGLLTNDVRRFGEPPGEKTSSLPTPNLAPVSVTPM 96
           AG MA+ LKSRSV+RF GPDTVKFL GLLTNDVRRFGE  GEK S++PTPN+A V+  PM
Sbjct: 28  AGPMASRLKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVTNPPM 87

Query: 97  YAAMLTPQGRFLYDLFLYRPPRSEEKLDRTGSGPGPAS--DESVELMADVDSSVLDELLV 156
           YAA+LTPQGRFLYD FLY P R +EKLDRTGSGPG  S  D SVEL ADVD  VLDELL 
Sbjct: 88  YAALLTPQGRFLYDFFLYSPSRPDEKLDRTGSGPGSDSGRDGSVELFADVDVDVLDELLE 147

Query: 157 TLKKYRLRSKVDIENVAEEFSCWQRFGKKLSRKASSAEEPDAASVGWGASVDPTAMSASR 216
           TLKKYRLRSKVDIENVAEEFSCWQR+G+ L+          ++SVGWG  VD    S + 
Sbjct: 148 TLKKYRLRSKVDIENVAEEFSCWQRYGRNLT---------GSSSVGWGGGVDRAGESTAS 207

Query: 217 GEDIGWQWFQDPRLDCLGFRGVFPSNGTPPLVEADKETDEDNYVMWRLEKGVAEGSTEIQ 276
           G   GWQW++DPRL+CLG+R +FPS+ TPPLVEADKETDE NY++WRLE GVAEGS EI 
Sbjct: 208 GNKYGWQWYKDPRLECLGYRSIFPSDATPPLVEADKETDESNYLLWRLEHGVAEGSAEIP 267

Query: 277 KGEAIPLEYNLVGLNAISFDKGCYVGQELVARTHHRGVIRKRVVPLRFLNDRGEDVEQNV 336
           KGEAIPLEYN VGLNAISFDKGCYVGQEL+ARTHHRGVIRKR++PLRF++  G+++ Q +
Sbjct: 268 KGEAIPLEYNFVGLNAISFDKGCYVGQELIARTHHRGVIRKRLIPLRFIDSNGKELNQKI 327

Query: 337 STGSEVINSASSKKVGNVIAAVGCRGLGLLRLEEAFRGSRSLAIQGLEGVTVEAIRPDWW 396
           + G+EV+ S + KK+G V  A+G RG+G++R+EEAF+ S  LA++  E V VEAI+P WW
Sbjct: 328 AAGAEVVESGTGKKMGTVSTALGSRGMGVMRVEEAFKPSAELAVKDSEEVKVEAIKPTWW 387

Query: 397 PAEWYQEHQ 404
           PAEW+Q++Q
Sbjct: 388 PAEWFQQNQ 387

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BLAST of CmaCh16G010420 vs. ExPASy Swiss-Prot
Match: Q8CAK1 (Putative transferase CAF17 homolog, mitochondrial OS=Mus musculus OX=10090 GN=Iba57 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 9.8e-39
Identity = 119/352 (33.81%), Postives = 163/352 (46.31%), Query Frame = 0


Query: 44  LKSRSVIRFRGPDTVKFLHGLLTNDVRRFGEPPGEKTSSLPTPNLAPVSVTPMYAAMLTP 103
           L  R+++R RGPD   FL GL TN++   G P G           A  S    YA  L  
Sbjct: 53  LDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTG----------AAQPSARAAYAHFLNV 112

Query: 104 QGRFLYDLFLYRPPRSEEKLDRTGSGPGPASDESVELMADVDSSVLDELLVTLKKYRLRS 163
           QGR LYD+ LY  P                ++ +   + + DSSVL  L   L  Y++R 
Sbjct: 113 QGRTLYDVILYGLPE--------------CTEGAPSFLLECDSSVLGALQKHLSMYKIRR 172

Query: 164 KVDIENVAEEFSCWQRFGKKLSRKASSAEEPDAASVGWGASVDPTAMSASRGEDIGWQWF 223
           KV +E  + E   W                   A +        TA    R E       
Sbjct: 173 KVTVE-PSPELHVW-------------------AVLPCVPQTSETAPLEERVEGT-TMLI 232

Query: 224 QDPRLDCLGFRGVFPSNGTPPLVEADKETDEDNYVMWRLEKGVAEGSTEIQKGEAIPLEY 283
           +DPR   +G+R +   +G P LV   +  D  +Y  +R ++G+ EG  ++  G A+PLE 
Sbjct: 233 RDPRTARMGWRLLTQDDG-PALVPRGQLGDLQDYHKYRYQQGIPEGVCDLPPGMALPLES 292

Query: 284 NLVGLNAISFDKGCYVGQELVARTHHRGVIRKRVVPLRFLNDRGEDVEQNVSTGSEVINS 343
           NLV +N +SF KGCY+GQEL ARTHH GVIRKR+ P++     G      VS G+ V  +
Sbjct: 293 NLVFMNGVSFTKGCYIGQELTARTHHTGVIRKRLFPVKL---EGPLPASGVSPGAIVTVT 352

Query: 344 ASSKKVGNVIAAVGCRGLGLLRLEEAFRGSRSLAIQGLEGVTVEAIRPDWWP 396
           A+ +  G   A  G  GL LLR  E  +G   +     + V V A+ PDWWP
Sbjct: 353 ATGQAAGKFRAGQGHVGLALLR-SETIKGPLHIKTSESQLVAVTAVVPDWWP 354

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BLAST of CmaCh16G010420 vs. ExPASy Swiss-Prot
Match: B8JMH0 (Putative transferase CAF17 homolog, mitochondrial OS=Danio rerio OX=7955 GN=iba57 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.2e-38
Identity = 123/379 (32.45%), Postives = 177/379 (46.70%), Query Frame = 0


Query: 25  CSSDTR--SHFSHAAGSMAAH-----LKSRSVIRFRGPDTVKFLHGLLTNDVRRFGEPPG 84
           C+S TR  +H    A S  AH     L  R+V+   G DT  FL G++TND+   GE   
Sbjct: 28  CTSRTRIKTHSQTRAASSTAHFSCYRLPHRTVLNVSGQDTSSFLQGIITNDMNLLGED-- 87

Query: 85  EKTSSLPTPNLAPVSVTPMYAAMLTPQGRFLYDLFLYRPPRSEEKLDRTGSGPGPASDES 144
                         S+  MYA +L  QGR LYD+ LY    + + L+             
Sbjct: 88  --------------SLNAMYAHVLNVQGRTLYDIILYSLKGNPDGLN------------- 147

Query: 145 VELMADVDSSVLDELLVTLKKYRLRSKVDIENVAEEFSCWQRFGKKLSRKASSAEEPDAA 204
             ++ + DS+V D ++  LK Y++R KV++ +V    S W         K +    PD  
Sbjct: 148 -GVLLECDSTVQDSVMQLLKVYKIRRKVNL-SVCPSLSLWALLPHS---KEAVLGRPDVT 207

Query: 205 SVGWGASVDPTAMSASRGEDIGWQWFQDPRLDCLGFRGVFPSNGTP-PLVEADKETDEDN 264
           +      ++                 +DPR + +G+R +  +   P  +V A +  + + 
Sbjct: 208 TTDKVLVLE-----------------KDPRTELMGWRMITSAQDNPLDIVSACRLGNTEE 267

Query: 265 YVMWRLEKGVAEGSTEIQKGEAIPLEYNLVGLNAISFDKGCYVGQELVARTHHRGVIRKR 324
           Y   R E G+ EG  ++  GEA+PLE NLV +  ISF KGCY+GQEL ARTHH GVIRKR
Sbjct: 268 YHRHRYEIGLPEGVGDLPPGEALPLEANLVYMQGISFSKGCYIGQELTARTHHTGVIRKR 327

Query: 325 VVPLRFLNDRGEDVEQNVSTGSEVINSASSKKVGNVIAAVGCRGLGLLRLEEAFRGSRSL 384
           ++P+  L+   E + Q        + +   K  G     V   GL L+RL  A + +  L
Sbjct: 328 LMPVS-LSAPAEKLNQ-----GSALQTEGGKPAGKYRTGVDKLGLSLVRLAHA-KETLQL 348

Query: 385 AIQGLEGVTVEAIRPDWWP 396
              G E VTV A  PDWWP
Sbjct: 388 KSSGDETVTVLASVPDWWP 348

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BLAST of CmaCh16G010420 vs. ExPASy Swiss-Prot
Match: Q4P7A4 (Putative transferase CAF17, mitochondrial OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=CAF17 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 6.0e-36
Identity = 114/393 (29.01%), Postives = 168/393 (42.75%), Query Frame = 0


Query: 42  AHLKSRSVIRFRGPDTVKFLHGLLTNDVRRFGEPPGEKTSSLPTPNLAPVSVTPMYAAML 101
           A +  R V++  G DTVK L GL++NDV+         T +   PN+       +YA  +
Sbjct: 53  AKVPHRGVVQVSGRDTVKLLQGLVSNDVKAL----DSTTLTHQPPNM-------VYAGFM 112

Query: 102 TPQGRFLYDLFLYRPPRSEEKLDRTGSGPGPASDESVELMADVDSSVLDELLVTLKKYRL 161
            PQGR L D+F++R P ++              D S   + D+DS  L  L+  +KK++L
Sbjct: 113 NPQGRMLADVFIHRQPANQ--------------DGSPRWLLDIDSRTLPSLVAFIKKFKL 172

Query: 162 RSKVDIENVAEEFSCWQRFGKKLSRKASSAEEPDAASVGWGASVDPTAMSASRGEDIGWQ 221
           RSKV + +++ ++   Q +        + AE+                            
Sbjct: 173 RSKVKLTDLSTDYHVVQAWDSNSQAPPTIAEKLSI------------------------- 232

Query: 222 WFQDPRLDCLGFRGVFPSNGTPPLVEADKETDEDNYVMWRLEKGVAEGSTEIQKGEAIPL 281
              DPR   +G+RGV  +     +  A    D   Y + R+  GVAEG+ +  +  ++PL
Sbjct: 233 ---DPRSPSIGYRGVLSAAEILDVAAAASTVDGLEYTLHRITNGVAEGALDFPQASSLPL 292

Query: 282 EYNLVGLNAISFDKGCYVGQELVARTHHRGVIRKRVVPLRFL------------------ 341
           E NL  ++ + F KGCYVGQEL ARTHH GV+RKR+VPL F                   
Sbjct: 293 ENNLDYMHGVDFRKGCYVGQELTARTHHTGVVRKRIVPLSFYLAGTPPPASIHDVDPAFP 352

Query: 342 ----NDRGEDVEQNVSTGSEVINS-ASSKKVGNVIAAVGCRGLGLLRLEEAFRGSRS--- 396
                   E   + +ST SE     A  K  G   + V   GL  LRLE+  R + S   
Sbjct: 353 HQLPTHLAEIRSKPISTASEAATKPARGKAAGKFTSGVYNVGLACLRLEQVRRWADSSSA 392

[Close]

BLAST of CmaCh16G010420 vs. ExPASy Swiss-Prot
Match: Q5T440 (Putative transferase CAF17, mitochondrial OS=Homo sapiens OX=9606 GN=IBA57 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.9e-35
Identity = 127/356 (35.67%), Postives = 168/356 (47.19%), Query Frame = 0


Query: 44  LKSRSVIRFRGPDTVKFLHGLLTNDVRRFGEPPGEKTSSLPTPNL--APVSVTPMYAAML 103
           L  R+++R RGPD   FL GLLTN++             LP+P    AP +    YA  L
Sbjct: 53  LDGRTLLRVRGPDAAPFLLGLLTNEL------------PLPSPAAAGAPPAARAGYAHFL 112

Query: 104 TPQGRFLYDLFLYRPPRSEEKLDRTGSGPGPASDESVELMADVDSSVLDELLVTLKKYRL 163
             QGR LYD+ LY      E      SG           + + DSSV   L   L  YR+
Sbjct: 113 NVQGRTLYDVILYGLQEHSEV-----SG----------FLLECDSSVQGALQKHLALYRI 172

Query: 164 RSKVDIENVAEEFSCWQRFGKKLSRKASSAEEPDAASVGWGASVDPTAMSASRGEDIGWQ 223
           R KV +E    E   W             A  P +      AS+   A +A+        
Sbjct: 173 RRKVTVE-PHPELRVW-------------AVLPSSPEACGAASLQERAGAAA-------I 232

Query: 224 WFQDPRLDCLGFRGVFPSNGTPPLVEADKETDEDNYVMWRLEKGVAEGSTEIQKGEAIPL 283
             +DPR   +G+R +    G P LV   +  D  +Y   R  +GV EG  ++  G A+PL
Sbjct: 233 LIRDPRTARMGWRLLTQDEG-PALVPGGRLGDLWDYHQHRYLQGVPEGVRDLPPGVALPL 292

Query: 284 EYNLVGLNAISFDKGCYVGQELVARTHHRGVIRKRVVPLRFLNDRGEDVEQNVSTGSEVI 343
           E NL  +N +SF KGCY+GQEL ARTHH GVIRKR+ P+RFL+         ++ G+ V+
Sbjct: 293 ESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPL---PTSGITPGATVL 352

Query: 344 NSASSKKVGNVIAAVGCRGLGLLRLEEAFRGSRSLAIQGLEG--VTVEAIRPDWWP 396
            +AS + VG   A  G  GL LL   E  +G   L I+  EG  V + A  PDWWP
Sbjct: 353 -TASGQTVGKFRAGQGNVGLALL-WSEKIKG--PLHIRASEGAQVALAASVPDWWP 352

[Close]

BLAST of CmaCh16G010420 vs. TAIR 10
Match: AT4G12130.1 (Glycine cleavage T-protein family )

HSP 1 Score: 520.0 bits (1338), Expect = 1.7e-147
Identity = 249/369 (67.48%), Postives = 297/369 (80.49%), Query Frame = 0


Query: 37  AGSMAAHLKSRSVIRFRGPDTVKFLHGLLTNDVRRFGEPPGEKTSSLPTPNLAPVSVTPM 96
           AG MA+ LKSRSV+RF GPDTVKFL GLLTNDVRRFGE  GEK S++PTPN+A V+  PM
Sbjct: 28  AGPMASRLKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVTNPPM 87

Query: 97  YAAMLTPQGRFLYDLFLYRPPRSEEKLDRTGSGPGPAS--DESVELMADVDSSVLDELLV 156
           YAA+LTPQGRFLYD FLY P R +EKLDRTGSGPG  S  D SVEL ADVD  VLDELL 
Sbjct: 88  YAALLTPQGRFLYDFFLYSPSRPDEKLDRTGSGPGSDSGRDGSVELFADVDVDVLDELLE 147

Query: 157 TLKKYRLRSKVDIENVAEEFSCWQRFGKKLSRKASSAEEPDAASVGWGASVDPTAMSASR 216
           TLKKYRLRSKVDIENVAEEFSCWQR+G+ L+          ++SVGWG  VD    S + 
Sbjct: 148 TLKKYRLRSKVDIENVAEEFSCWQRYGRNLT---------GSSSVGWGGGVDRAGESTAS 207

Query: 217 GEDIGWQWFQDPRLDCLGFRGVFPSNGTPPLVEADKETDEDNYVMWRLEKGVAEGSTEIQ 276
           G   GWQW++DPRL+CLG+R +FPS+ TPPLVEADKETDE NY++WRLE GVAEGS EI 
Sbjct: 208 GNKYGWQWYKDPRLECLGYRSIFPSDATPPLVEADKETDESNYLLWRLEHGVAEGSAEIP 267

Query: 277 KGEAIPLEYNLVGLNAISFDKGCYVGQELVARTHHRGVIRKRVVPLRFLNDRGEDVEQNV 336
           KGEAIPLEYN VGLNAISFDKGCYVGQEL+ARTHHRGVIRKR++PLRF++  G+++ Q +
Sbjct: 268 KGEAIPLEYNFVGLNAISFDKGCYVGQELIARTHHRGVIRKRLIPLRFIDSNGKELNQKI 327

Query: 337 STGSEVINSASSKKVGNVIAAVGCRGLGLLRLEEAFRGSRSLAIQGLEGVTVEAIRPDWW 396
           + G+EV+ S + KK+G V  A+G RG+G++R+EEAF+ S  LA++  E V VEAI+P WW
Sbjct: 328 AAGAEVVESGTGKKMGTVSTALGSRGMGVMRVEEAFKPSAELAVKDSEEVKVEAIKPTWW 387

Query: 397 PAEWYQEHQ 404
           PAEW+Q++Q
Sbjct: 388 PAEWFQQNQ 387

The following BLAST results are available for this feature:

BLAST of CmaCh16G010420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L733	2.4e-146	67.48	Putative transferase At4g12130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8CAK1	9.8e-39	33.81	Putative transferase CAF17 homolog, mitochondrial OS=Mus musculus OX=10090 GN=Ib...	[more]
B8JMH0	2.2e-38	32.45	Putative transferase CAF17 homolog, mitochondrial OS=Danio rerio OX=7955 GN=iba5...	[more]
Q4P7A4	6.0e-36	29.01	Putative transferase CAF17, mitochondrial OS=Ustilago maydis (strain 521 / FGSC ...	[more]
Q5T440	3.9e-35	35.67	Putative transferase CAF17, mitochondrial OS=Homo sapiens OX=9606 GN=IBA57 PE=1 ...	[more]

BLAST of CmaCh16G010420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12130.1	1.7e-147	67.48	Glycine cleavage T-protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017703	YgfZ/GcvT conserved site	TIGRFAM	TIGR03317	TIGR03317	coord: 256..321 e-value: 1.6E-25 score: 86.9
IPR027266	GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1	GENE3D	3.30.1360.120	Probable tRNA modification gtpase trme; domain 1	coord: 22..388 e-value: 3.5E-46 score: 160.0
None	No IPR available	PANTHER	PTHR22602	UNCHARACTERIZED	coord: 34..397
None	No IPR available	SUPERFAMILY	103025	Folate-binding domain	coord: 28..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G010420.1	CmaCh16G010420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity