CmaCh16G010390 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G010390
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionRibonuclease H-like domain containing protein
LocationCma_Chr16: 7985007 .. 7987238 (+)
RNA-Seq ExpressionCmaCh16G010390
SyntenyCmaCh16G010390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATTCCGACGACGCCACCGCCCGAGCTGTCCACCGCCGCTACGAGGGCCTTCTAATGGTCCGTACCAAAGCCCTCAAGGGCAAAGGAGCCTGGTACTGGTCTCACCTCGAACCCCTTTTGCTTAAAAACTCCGATACCGGCTATCCCAAAGCTGTCAAGCTTCGATGCTCCTTATGCGACGCCGTTTTCTCCGCTTCTAACCCTTCTCGCACCGCCTCCGAGCATCTCAAACGTGGGACCTGTTCTAATTTCAACTCCCTCTCCAAAACCCCCTTTATTCCCTCCCCTGTTTCTACTTCCCCTGTTTCTTGTAAGCGGCCCGCCGATGATACCTGCGGCGGCGGCGGCGGGGATTCGTTTTATGACATTTCTCCATTGACGGTGGTGGATCCGTCGGGGGTTTATGGTGGTTCGTTCTCGTCGTTTTTACCTCAACATCAGAATCCACAACAGCCTGTTTTGGTGTTGTCCGGTGGGAAAGAGGATTTGGGGGCTTTGGCTATGTTGGAGAAAAGCGTTAAAAGGCTTAGAACACCAAGAACATCCCCTGGGGTATCATTAAACAAGGCTCAGATTGATTCTGCGCTTGATTTTCTTACAGATTGGGTGTTTGAATCATCTGGGTCAGTCTCAATTTCTAGTTTAGAGCATCCAAAATTCAAGGCGTTCTTGACTCAAGTCGGGTTGCCTTCGATCTCATCAAGGGATTTTGCAAGATTTAGATTGAATTCTAAATACGAAATGGCCAAGGCTGATGTTCATTTGAAAATTACTGATACCATGTTCTTCCAAATCGCCTCAAATGGGTGGAAAACTCATAATCGAGAGCATAAAACTATGGTTCATATGACTCTAAACCTCCCAAATGGGACTAGTTTGTATAGAAAAACTCTGTTTCTCAGCTCTTCTGTTCCTTGTAGCTTTGCAGAGGAAGTTCTTTGGAATACTGTTTCTGAAATTTGTGGAAGCAGCACGGAGAAATGTGTCGGGATCGTGGCTGATAAGTTCGAGGGGAAGACATTGAAGAACTTGGAAGATCAGCATCCATGGCTGGTTAATCTTCCATGTCAATTTCAAGCTTTCAATGATTTGGTTGAGGATTTCATTACAAATCTCCCTTTGTTCAAGAAAGTCACCCAAAACTGTAAAAGGGTAGCTCAGTTCTTCAACTTTGAGTCTAATATCAGAAAGATCTTCCATAGGTATCAATTACAAGAATGTGGCTATACTCGTTTGATATCAATGGGCACTGCTGAAACAGAGGAGATAGAAGCTATGACACTCTTCGGAATGGTCGACGACATACTCGAGTCAGCTCCCGCGATGCAATTAGCCCGGCTCGACGAAGCTTACAAGACGACATCGATGGAGGAGAATTCGATAGCTCGAGAGGTTTCGAACTTAGTTGGGGATTCTACGTTTTGGAATGAAGTGGAAGCTGTTCATTGTTTGATCAAGTTAATGAAGAACATGGCTGATGAGATTGAAACAGAGAGGCCATTAGTAGGACAATGTCTTCCACTTTGGGAAGAATTAAGAGAGAAAGTGAAAGATTGGTGCAAAAAGTTCAAAATCTCAGAAGAATCAATGGAGAATATAGTGTCAATGAGGTTTAAGAAGAATTACCACCCGGCATGGGCGGCGGCGTTCGTGCTCGATCCACTCTATCTTACACGGGACAACACTGGGAAGTACCTCCCGCCGTTCAAACGCTTGACGACAGAGCAAGAGAAGGACGTCGATCGCCTTATAACACGGCTCGTGGCGACGGAGGAAGCTCACATTGTACTAATGGAGCTGATGAAATGGAGAACAGAAGGGCTTGATGAAGTATATGCAAGAGCTGTTCAAATGAAGGAGAAGAATCCCATTACAGGGAAATTAAGAACAGCTAATCCACAGAGCAGTAGGCTTGTATGGGAAACATACTTAACTGATTTCAAATCATTGAGGAAAGTTGCTGTTAGGCTCATTTTTCTTCATGCCACTTCATGTGGGTATAAAAGTAATGCCAATTTTGAAAGAATGATGTGTTCATATGGAAGCTGCTCAAGAGGTGTCGCTGAAGGTGTTAAGAAGTTGGTGTTCATTTCAGCTCGTTCGAAGCTCGAGAAGAGGAATTTTTGTAACGATGACGACAAGAACGACGATGATATCGAGTTGTTTGGAGCGGTAAATAGTGACGATGATCTGCCAAGCGAGGCTGATAGATCATCTTCGTTGTAA

mRNA sequence

ATGGCGGATTCCGACGACGCCACCGCCCGAGCTGTCCACCGCCGCTACGAGGGCCTTCTAATGGTCCGTACCAAAGCCCTCAAGGGCAAAGGAGCCTGGTACTGGTCTCACCTCGAACCCCTTTTGCTTAAAAACTCCGATACCGGCTATCCCAAAGCTGTCAAGCTTCGATGCTCCTTATGCGACGCCGTTTTCTCCGCTTCTAACCCTTCTCGCACCGCCTCCGAGCATCTCAAACGTGGGACCTGTTCTAATTTCAACTCCCTCTCCAAAACCCCCTTTATTCCCTCCCCTGTTTCTACTTCCCCTGTTTCTTGTAAGCGGCCCGCCGATGATACCTGCGGCGGCGGCGGCGGGGATTCGTTTTATGACATTTCTCCATTGACGGTGGTGGATCCGTCGGGGGTTTATGGTGGTTCGTTCTCGTCGTTTTTACCTCAACATCAGAATCCACAACAGCCTGTTTTGGTGTTGTCCGGTGGGAAAGAGGATTTGGGGGCTTTGGCTATGTTGGAGAAAAGCGTTAAAAGGCTTAGAACACCAAGAACATCCCCTGGGGTATCATTAAACAAGGCTCAGATTGATTCTGCGCTTGATTTTCTTACAGATTGGGTGTTTGAATCATCTGGGTCAGTCTCAATTTCTAGTTTAGAGCATCCAAAATTCAAGGCGTTCTTGACTCAAGTCGGGTTGCCTTCGATCTCATCAAGGGATTTTGCAAGATTTAGATTGAATTCTAAATACGAAATGGCCAAGGCTGATGTTCATTTGAAAATTACTGATACCATGTTCTTCCAAATCGCCTCAAATGGGTGGAAAACTCATAATCGAGAGCATAAAACTATGGTTCATATGACTCTAAACCTCCCAAATGGGACTAGTTTGTATAGAAAAACTCTGTTTCTCAGCTCTTCTGTTCCTTGTAGCTTTGCAGAGGAAGTTCTTTGGAATACTGTTTCTGAAATTTGTGGAAGCAGCACGGAGAAATGTGTCGGGATCGTGGCTGATAAGTTCGAGGGGAAGACATTGAAGAACTTGGAAGATCAGCATCCATGGCTGGTTAATCTTCCATGTCAATTTCAAGCTTTCAATGATTTGGTTGAGGATTTCATTACAAATCTCCCTTTGTTCAAGAAAGTCACCCAAAACTGTAAAAGGGTAGCTCAGTTCTTCAACTTTGAGTCTAATATCAGAAAGATCTTCCATAGGTATCAATTACAAGAATGTGGCTATACTCGTTTGATATCAATGGGCACTGCTGAAACAGAGGAGATAGAAGCTATGACACTCTTCGGAATGGTCGACGACATACTCGAGTCAGCTCCCGCGATGCAATTAGCCCGGCTCGACGAAGCTTACAAGACGACATCGATGGAGGAGAATTCGATAGCTCGAGAGGTTTCGAACTTAGTTGGGGATTCTACGTTTTGGAATGAAGTGGAAGCTGTTCATTGTTTGATCAAGTTAATGAAGAACATGGCTGATGAGATTGAAACAGAGAGGCCATTAGTAGGACAATGTCTTCCACTTTGGGAAGAATTAAGAGAGAAAGTGAAAGATTGGTGCAAAAAGTTCAAAATCTCAGAAGAATCAATGGAGAATATAGTGTCAATGAGGTTTAAGAAGAATTACCACCCGGCATGGGCGGCGGCGTTCGTGCTCGATCCACTCTATCTTACACGGGACAACACTGGGAAGTACCTCCCGCCGTTCAAACGCTTGACGACAGAGCAAGAGAAGGACGTCGATCGCCTTATAACACGGCTCGTGGCGACGGAGGAAGCTCACATTGTACTAATGGAGCTGATGAAATGGAGAACAGAAGGGCTTGATGAAGTATATGCAAGAGCTGTTCAAATGAAGGAGAAGAATCCCATTACAGGGAAATTAAGAACAGCTAATCCACAGAGCAGTAGGCTTGTATGGGAAACATACTTAACTGATTTCAAATCATTGAGGAAAGTTGCTGTTAGGCTCATTTTTCTTCATGCCACTTCATGTGGGTATAAAAGTAATGCCAATTTTGAAAGAATGATGTGTTCATATGGAAGCTGCTCAAGAGGTGTCGCTGAAGGTGTTAAGAAGTTGGTGTTCATTTCAGCTCGTTCGAAGCTCGAGAAGAGGAATTTTTGTAACGATGACGACAAGAACGACGATGATATCGAGTTGTTTGGAGCGGTAAATAGTGACGATGATCTGCCAAGCGAGGCTGATAGATCATCTTCGTTGTAA

Coding sequence (CDS)

ATGGCGGATTCCGACGACGCCACCGCCCGAGCTGTCCACCGCCGCTACGAGGGCCTTCTAATGGTCCGTACCAAAGCCCTCAAGGGCAAAGGAGCCTGGTACTGGTCTCACCTCGAACCCCTTTTGCTTAAAAACTCCGATACCGGCTATCCCAAAGCTGTCAAGCTTCGATGCTCCTTATGCGACGCCGTTTTCTCCGCTTCTAACCCTTCTCGCACCGCCTCCGAGCATCTCAAACGTGGGACCTGTTCTAATTTCAACTCCCTCTCCAAAACCCCCTTTATTCCCTCCCCTGTTTCTACTTCCCCTGTTTCTTGTAAGCGGCCCGCCGATGATACCTGCGGCGGCGGCGGCGGGGATTCGTTTTATGACATTTCTCCATTGACGGTGGTGGATCCGTCGGGGGTTTATGGTGGTTCGTTCTCGTCGTTTTTACCTCAACATCAGAATCCACAACAGCCTGTTTTGGTGTTGTCCGGTGGGAAAGAGGATTTGGGGGCTTTGGCTATGTTGGAGAAAAGCGTTAAAAGGCTTAGAACACCAAGAACATCCCCTGGGGTATCATTAAACAAGGCTCAGATTGATTCTGCGCTTGATTTTCTTACAGATTGGGTGTTTGAATCATCTGGGTCAGTCTCAATTTCTAGTTTAGAGCATCCAAAATTCAAGGCGTTCTTGACTCAAGTCGGGTTGCCTTCGATCTCATCAAGGGATTTTGCAAGATTTAGATTGAATTCTAAATACGAAATGGCCAAGGCTGATGTTCATTTGAAAATTACTGATACCATGTTCTTCCAAATCGCCTCAAATGGGTGGAAAACTCATAATCGAGAGCATAAAACTATGGTTCATATGACTCTAAACCTCCCAAATGGGACTAGTTTGTATAGAAAAACTCTGTTTCTCAGCTCTTCTGTTCCTTGTAGCTTTGCAGAGGAAGTTCTTTGGAATACTGTTTCTGAAATTTGTGGAAGCAGCACGGAGAAATGTGTCGGGATCGTGGCTGATAAGTTCGAGGGGAAGACATTGAAGAACTTGGAAGATCAGCATCCATGGCTGGTTAATCTTCCATGTCAATTTCAAGCTTTCAATGATTTGGTTGAGGATTTCATTACAAATCTCCCTTTGTTCAAGAAAGTCACCCAAAACTGTAAAAGGGTAGCTCAGTTCTTCAACTTTGAGTCTAATATCAGAAAGATCTTCCATAGGTATCAATTACAAGAATGTGGCTATACTCGTTTGATATCAATGGGCACTGCTGAAACAGAGGAGATAGAAGCTATGACACTCTTCGGAATGGTCGACGACATACTCGAGTCAGCTCCCGCGATGCAATTAGCCCGGCTCGACGAAGCTTACAAGACGACATCGATGGAGGAGAATTCGATAGCTCGAGAGGTTTCGAACTTAGTTGGGGATTCTACGTTTTGGAATGAAGTGGAAGCTGTTCATTGTTTGATCAAGTTAATGAAGAACATGGCTGATGAGATTGAAACAGAGAGGCCATTAGTAGGACAATGTCTTCCACTTTGGGAAGAATTAAGAGAGAAAGTGAAAGATTGGTGCAAAAAGTTCAAAATCTCAGAAGAATCAATGGAGAATATAGTGTCAATGAGGTTTAAGAAGAATTACCACCCGGCATGGGCGGCGGCGTTCGTGCTCGATCCACTCTATCTTACACGGGACAACACTGGGAAGTACCTCCCGCCGTTCAAACGCTTGACGACAGAGCAAGAGAAGGACGTCGATCGCCTTATAACACGGCTCGTGGCGACGGAGGAAGCTCACATTGTACTAATGGAGCTGATGAAATGGAGAACAGAAGGGCTTGATGAAGTATATGCAAGAGCTGTTCAAATGAAGGAGAAGAATCCCATTACAGGGAAATTAAGAACAGCTAATCCACAGAGCAGTAGGCTTGTATGGGAAACATACTTAACTGATTTCAAATCATTGAGGAAAGTTGCTGTTAGGCTCATTTTTCTTCATGCCACTTCATGTGGGTATAAAAGTAATGCCAATTTTGAAAGAATGATGTGTTCATATGGAAGCTGCTCAAGAGGTGTCGCTGAAGGTGTTAAGAAGTTGGTGTTCATTTCAGCTCGTTCGAAGCTCGAGAAGAGGAATTTTTGTAACGATGACGACAAGAACGACGATGATATCGAGTTGTTTGGAGCGGTAAATAGTGACGATGATCTGCCAAGCGAGGCTGATAGATCATCTTCGTTGTAA

Protein sequence

MADSDDATARAVHRRYEGLLMVRTKALKGKGAWYWSHLEPLLLKNSDTGYPKAVKLRCSLCDAVFSASNPSRTASEHLKRGTCSNFNSLSKTPFIPSPVSTSPVSCKRPADDTCGGGGGDSFYDISPLTVVDPSGVYGGSFSSFLPQHQNPQQPVLVLSGGKEDLGALAMLEKSVKRLRTPRTSPGVSLNKAQIDSALDFLTDWVFESSGSVSISSLEHPKFKAFLTQVGLPSISSRDFARFRLNSKYEMAKADVHLKITDTMFFQIASNGWKTHNREHKTMVHMTLNLPNGTSLYRKTLFLSSSVPCSFAEEVLWNTVSEICGSSTEKCVGIVADKFEGKTLKNLEDQHPWLVNLPCQFQAFNDLVEDFITNLPLFKKVTQNCKRVAQFFNFESNIRKIFHRYQLQECGYTRLISMGTAETEEIEAMTLFGMVDDILESAPAMQLARLDEAYKTTSMEENSIAREVSNLVGDSTFWNEVEAVHCLIKLMKNMADEIETERPLVGQCLPLWEELREKVKDWCKKFKISEESMENIVSMRFKKNYHPAWAAAFVLDPLYLTRDNTGKYLPPFKRLTTEQEKDVDRLITRLVATEEAHIVLMELMKWRTEGLDEVYARAVQMKEKNPITGKLRTANPQSSRLVWETYLTDFKSLRKVAVRLIFLHATSCGYKSNANFERMMCSYGSCSRGVAEGVKKLVFISARSKLEKRNFCNDDDKNDDDIELFGAVNSDDDLPSEADRSSSL
Homology
BLAST of CmaCh16G010390 vs. TAIR 10
Match: AT1G62870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12380.1); Has 351 Blast hits to 343 proteins in 42 species: Archae - 2; Bacteria - 0; Metazoa - 27; Fungi - 5; Plants - 299; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). )

HSP 1 Score: 836.6 bits (2160), Expect = 1.5e-242
Identity = 432/742 (58.22%), Postives = 550/742 (74.12%), Query Frame = 0

Query: 4   SDDATARAVHRRYEGLLMVRTKALKGKGAWYWSHLEPLLLKNSDTGYPKAVKLRCSLCDA 63
           +++   +A+ +RYEGL+MVRTKA+KGKGAWYWSHLEP+LL N+DTG+PKAVKLRCSLCDA
Sbjct: 27  AEELATKALQKRYEGLMMVRTKAVKGKGAWYWSHLEPILLHNTDTGFPKAVKLRCSLCDA 86

Query: 64  VFSASNPSRTASEHLKRGTCSNFNSLSK-----TPFIPSPVSTSPVSCKRPADDTCG--- 123
           VFSASNPSRTASEHLKRGTC NFNSL K     +P  P P S+S       A +      
Sbjct: 87  VFSASNPSRTASEHLKRGTCPNFNSLPKPISTISPSPPPPPSSSHRKRNSSAVEALNHHH 146

Query: 124 ---GGGGDSFYDISPLTVVDPSGVYGGSFSSFLPQHQNPQQPVLVLSGGKEDLGALAMLE 183
                     Y+++PL+VVDP        S F  Q    QQP L+LSGGK+DLG LAMLE
Sbjct: 147 HHPHHHHQGSYNVTPLSVVDP--------SRFCGQFPVTQQPHLMLSGGKDDLGPLAMLE 206

Query: 184 KSVKRLRTPRTSPGVSLNKAQIDSALDFLTDWVFESSGSVSISSLEHPKFKAFLTQVGLP 243
            SVK+L++P+TS   +L KAQIDSALD L+DWVFES GSVS+S LEHPK +AFLTQVGLP
Sbjct: 207 DSVKKLKSPKTSQTRNLTKAQIDSALDSLSDWVFESCGSVSLSGLEHPKLRAFLTQVGLP 266

Query: 244 SISSRDFARFRLNSKYEMAKADVHLKITDTMFFQIASNGWKTHNREHKTMVHMTLNLPNG 303
            IS RDF   RL+ KYE ++A+   +I D MFFQIAS+GWK  +   + +V++ +NLPNG
Sbjct: 267 IISRRDFVTGRLDLKYEDSRAEAESRIHDAMFFQIASDGWK-FDSSGENLVNLIVNLPNG 326

Query: 304 TSLYRKTLFLSSSVPCSFAEEVLWNTVSEICGSSTEKCVGIVADKFEGKTLKNLEDQHPW 363
           TSLYR+ +F++ +VP ++AEEVLW TV  ICG+S ++CVGIV+D+F  K L+NLE QH W
Sbjct: 327 TSLYRRAVFVNGAVPSNYAEEVLWETVRGICGNSPQRCVGIVSDRFMSKALRNLESQHQW 386

Query: 364 LVNLPCQFQAFNDLVEDFITNLPLFKKVTQNCKRVAQFFNFESNIRKIFHRYQLQECGYT 423
           +VNL CQFQ FN L+ DF+  LPLFK V+Q+C R+  F N  + IR    +YQLQE G T
Sbjct: 387 MVNLSCQFQGFNSLIRDFVKELPLFKSVSQSCSRLVNFVNSTAQIRNAVCKYQLQEQGET 446

Query: 424 RLISMGTAETEEIEAMTLFGMVDDILESAPAMQLARLDEAYKTTSMEENSIAREVSNLVG 483
           R++ +   ++   E   L+ +++D+L  A A+QL   D+  K   ME++ +AREV  +VG
Sbjct: 447 RMLHL-PLDSSLFE--PLYNLLEDVLSFARAIQLVMHDDVCKAVLMEDH-MAREVGEMVG 506

Query: 484 DSTFWNEVEAVHCLIKLMKNMADEIETERPLVGQCLPLWEELREKVKDWCKKFKISEE-S 543
           D  FWNEVEAV+ L+KL+K MA  IE ERPLVGQCLPLW+ELR K+KDW  KF + EE  
Sbjct: 507 DVGFWNEVEAVYLLLKLVKEMARRIEEERPLVGQCLPLWDELRSKIKDWYAKFNVVEERQ 566

Query: 544 MENIVSMRFKKNYHPAWAAAFVLDPLYLTRDNTGKYLPPFKRLTTEQEKDVDRLITRLVA 603
           +E IV  RFKK+YHPAWAAAF+LDPLYL +D++GKYLPPFK L+ EQEKDVD+LITRLV+
Sbjct: 567 VEKIVERRFKKSYHPAWAAAFILDPLYLIKDSSGKYLPPFKCLSPEQEKDVDKLITRLVS 626

Query: 604 TEEAHIVLMELMKWRTEGLDEVYARAVQMKEKNPITGKLRTANPQSSRLVWETYLTDFKS 663
            +EAHI +MELMKWRTEGLD VYARAVQMKE++P++GK+R ANPQSSRLVWETYL++F+S
Sbjct: 627 RDEAHIAMMELMKWRTEGLDPVYARAVQMKERDPVSGKMRIANPQSSRLVWETYLSEFRS 686

Query: 664 LRKVAVRLIFLHATSCGYKSNANFERMMCSYGSCSRGVAEGVKKLVFISARSKLEKRNFC 723
           L +VAVRLIFLHATSCG+K N++  R + S G  SR   +  +KL+FISA SK E+R+F 
Sbjct: 687 LGRVAVRLIFLHATSCGFKCNSSVLRWVNSNGR-SRAAVDRAQKLIFISANSKFERRDFS 746

Query: 724 NDDDKNDDDIELFGAVNSDDDL 734
           N++++   D EL    N +DD+
Sbjct: 747 NEEER---DAELLAMANGEDDV 751

BLAST of CmaCh16G010390 vs. TAIR 10
Match: AT1G12380.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62870.1); Has 173 Blast hits to 170 proteins in 34 species: Archae - 0; Bacteria - 4; Metazoa - 25; Fungi - 8; Plants - 123; Viruses - 7; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 821.6 bits (2121), Expect = 5.0e-238
Identity = 429/761 (56.37%), Postives = 548/761 (72.01%), Query Frame = 0

Query: 4   SDDATARAVHRRYEGLLMVRTKALKGKGAWYWSHLEPLLLKNSDTGYPKAVKLRCSLCDA 63
           +D+ TA+A+++RYEGL+ VRTKA+KGKGAWYW+HLEP+L++N+DTG PKAVKLRCSLCDA
Sbjct: 34  TDELTAKALNKRYEGLMTVRTKAVKGKGAWYWTHLEPILVRNTDTGLPKAVKLRCSLCDA 93

Query: 64  VFSASNPSRTASEHLKRGTCSNFNSLSKTPFI-PSPVSTSPVSCKRPADDTCGGG----- 123
           VFSASNPSRTASEHLKRGTC NFNS++    I PSP S+S             G      
Sbjct: 94  VFSASNPSRTASEHLKRGTCPNFNSVTPISTITPSPTSSSSSPQTHHRKRNSSGAVTTAI 153

Query: 124 ---------GGDSFYDISPLTVVDPSGVYGGSFSSFLPQHQNPQQPVLVLSGGKEDLGAL 183
                    GG   Y ++P+TVVDPS   GG      P    P    L+LSGGK+DLG L
Sbjct: 154 PSRLNPPPIGGS--YHVTPITVVDPSRFCGGELHYSTP----PPPQHLMLSGGKDDLGPL 213

Query: 184 AMLEKSVKRLRTPRTSPGVSLNKAQIDSALDFLTDWVFESSGSVSISSLEHPKFKAFLTQ 243
           AMLE SVK+L++P+ S   SL ++QI+SALD L+DWVFES GSVS+S LEHPKF+AFLTQ
Sbjct: 214 AMLEDSVKKLKSPKPSQTQSLTRSQIESALDSLSDWVFESCGSVSLSGLEHPKFRAFLTQ 273

Query: 244 VGLPSISSRDFARFRLNSKYEMAKADVHLKITDTMFFQIASNGWKTHNREHKTMVHMTLN 303
           VGLP IS RDFA  RL+ K+E A+A+   +I D MFFQI+S+GWK      +++V++ +N
Sbjct: 274 VGLPIISKRDFATTRLDLKHEEARAEAESRIRDAMFFQISSDGWKP-GESGESLVNLIVN 333

Query: 304 LPNGTSLYRKTLFLSSSVPCSFAEEVLWNTVSEICGSSTEKCVGIVADKFEGKTLKNLED 363
           LPNGTSLYR+ + ++ +VP ++AEEVL  TV  ICG+S ++CVGIV+DKF+ K L+NLE 
Sbjct: 334 LPNGTSLYRRAVLVNGAVPSNYAEEVLLETVKGICGNSPQRCVGIVSDKFKTKALRNLES 393

Query: 364 QHPWLVNLPCQFQAFNDLVEDFITNLPLFKKVTQNCKRVAQFFNFESNIRKIFHRYQLQE 423
           QH W+VNL CQFQ  N L++DF+  LPLFK V+QNC R+A+F N  + IR    +YQLQE
Sbjct: 394 QHQWMVNLSCQFQGLNSLIKDFVKELPLFKSVSQNCVRLAKFINNTAQIRNAHCKYQLQE 453

Query: 424 CGYTRLI----------------SMGTAETEEIEAMTLFGMVDDILESAPAMQLARLDEA 483
            G + ++                S  +   +      LF +++D+L SA A+QL   D+A
Sbjct: 454 HGESIMLRLPLHCYYDDERRSCSSSSSGSNKVCFYEPLFNLLEDVLSSARAIQLVVHDDA 513

Query: 484 YKTTSMEENSIAREVSNLVGDSTFWNEVEAVHCLIKLMKNMADEIETERPLVGQCLPLWE 543
            K   ME++ +AREV  +VGD  FWNEVEAVH LIKL+K MA  IE E+ LVGQCLPLW+
Sbjct: 514 CKVVLMEDH-MAREVREMVGDEGFWNEVEAVHALIKLVKEMARRIEEEKLLVGQCLPLWD 573

Query: 544 ELREKVKDWCKKFKISEESMENIVSMRFKKNYHPAWAAAFVLDPLYLTRDNTGKYLPPFK 603
           ELR KVKDW  KF + E  +E +V  RFKK+YHPAWAAAF+LDPLYL RD++GKYLPPFK
Sbjct: 574 ELRAKVKDWDSKFNVGEGHVEKVVERRFKKSYHPAWAAAFILDPLYLIRDSSGKYLPPFK 633

Query: 604 RLTTEQEKDVDRLITRLVATEEAHIVLMELMKWRTEGLDEVYARAVQMKEKNPITGKLRT 663
            L+ EQEKDVD+LITRLV+ +EAHI LMELMKWRTEGLD +YARAVQMKE++P++GK+R 
Sbjct: 634 CLSPEQEKDVDKLITRLVSRDEAHIALMELMKWRTEGLDPMYARAVQMKERDPVSGKMRI 693

Query: 664 ANPQSSRLVWETYLTDFKSLRKVAVRLIFLHATSCGYKSNANFERMMCSYGSCSRGVAEG 723
           ANPQSSRLVWETYL++F+SL KVAVRLIFLHAT+ G+K N++  + + S G  S    + 
Sbjct: 694 ANPQSSRLVWETYLSEFRSLGKVAVRLIFLHATTGGFKCNSSLLKWVNSNGR-SHAAVDR 753

Query: 724 VKKLVFISARSKLEKRNFCNDDDKNDDDIELFGAVNSDDDL 734
            +KL+FISA SK E+R+F N++D+   D EL    N DD +
Sbjct: 754 AQKLIFISANSKFERRDFSNEEDR---DAELLAMANGDDHM 782

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT1G62870.11.5e-24258.22unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G12380.15.0e-23856.37unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32166:SF92F16P17.2 PROTEINcoord: 4..721
NoneNo IPR availablePANTHERPTHR32166OSJNBA0013A04.12 PROTEINcoord: 4..721
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 313..671

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G010390.1CmaCh16G010390.1mRNA