CmaCh16G010370 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G010370
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionprotein cornichon homolog 4-like
LocationCma_Chr16: 7963838 .. 7967119 (-)
RNA-Seq ExpressionCmaCh16G010370
SyntenyCmaCh16G010370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTTTTTTTTGGTATAATTTAATAAAAAGAAAACCCTTTAAAATTTGATTTCCAATAGTGTCCCTGGAAATTTGACTCCCTAGACATACGGCGGCGTTCGTCAACGACGAGATCTTCCGGTCATCCAAATCCACTTGCGTGTTCATCTTTCACGAGAATCCTGCGTGAACCTCCGAGGACTGTAGCGTGAGTTTCCTGCCCTAATCTCTTTCTACTGCATCTTCACTTAGCCGCCATCTTTCTCGGCAATGGTGGTGCTTCAATCTCTCTGTTCGCCTTTAACCGAAAATCACTGATAATATAGCTTGATTGACCGCAGAAGAGGAGCATGGGGGATCTATTTGTGTGGCTTATATCATTCTTCTCCCTCGTTGCTCTTTTGATAGTCCTTGTTTATCAGGTAAATTCGAAACCCTGTCTCGTCTGTTTGTCTCGCATTGACTTCCGTTCGAGTTCGTTAAGTAGAATCAATTTGAATCGAAGACAGTTTATATCAAAATTTTGATGGCGGATACATTTCGTACAATTTCTGAACATTAATTTGCAGTAGATTAGGATTTCGATACGCGTTTTGTTCAGCTCGGAGATATTAGGGTTTAGCTCAATTATAATTCACAAATTCTTCTTCGCTTGTCAATTTGGAAACACTTTTAAAGAAAGTGTAGATTCGTTGTGCACCTTGGATTGGATTTATATTTTGATTGGATATCATGCTTTGTAGTTTTCTTGTTTTAATAATTTGCACTCTTGATTGCTTTTCCCCAATTTCTTGAAAAGATTCTGAGGTCAGGATTTTCCTGGTGGTCAATTGCTGTAAGGTTATTTGTCAATACCTATATTTTTTATCCCATTTCTTCTTTGTGAAGTATAATTAAAGCTAAAATTTAAGAATATATGGTGTTTAGGGTTATTTCATGGCATATATACTTGAAAGATTATGGATGCAATGAGTCATTATATCATGTTGACTGCTGATTCTTAGTTTGAATATTTATTACGCCCAGAATTTATGATGTTGATCTTCAGAATATCTGTTGGTAGAAGCTTAATTTCCCAAGAGGCTGGCAATGTTAAGAAAAATTTCAACAACATTTTAGGACTTGTTCAATCAAGTCTTCCTTTTTGTATTTAAACATATCAATTTCCTATCTTTGAGCTTTTTACGTATGCTGGATCAAATATCAAGTTGTTTTGAATTTATTGTTGTTTTTGTTATCGTTTCATTGTCATTATTTTGTATGTGTAGCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAACCCTTATGACTCTGCCTCTAGAATAAATAAAGTGGTTATGCCGGAGTTCATTGCTATTGGAGTTTTGTGCCTCTTCTATCTTTTAACAGGGCATTGGGGTATGTCAATGTTATGTGGACCGTACATATATTATAATGTGAGACTGTAAGTGTTTTCATCCATCACCTTTGATTGAACTTATGGTCTAAATCAAGAACAATTTGTATGATTTGTATTGTATAATTCTTTCAACCAAAGAAACACGTGATTTTGAACAGTTTTGACTGCATAGGATATTTACTTCTGATTTTGACCGTTTAATAGACATCCCATTGATTTGACATAGCTTAAGAAATTCCAGATGTTAGAGTTGAGGATTATCCTTGAAGCTAAGATCTACTTTGTTGGGCTGGGCTTTGTCAGAGCAGCATAGACCATGTTGGTATGTGGTTGTAAGCTGTGGCTGCTTACTAGTGTAGTTGGGATGTGATAGGGAACGCTAGTTAGAGATATGTATCGGTTCTAATTACGCCTCTAATCCATTTTTTCGGACTACTGAATAATGACTGCCTTTGATGTATTGTGTATGGTATATGGTTGGAGCTTGCTTTATTTCCATCTCAGAAAATTCATGTGGTAGTTTAGAGTAGTAGCAGAACTTCCTTGGTTGAAAAACTAATTTACTATGCATTGGAGTCATCACATTCTGAATCTAATGGTATTTTTGATTCTCAAGGAGAATTAGAATTAAGAATGCCAACTTTTAAGTTGGTTTTTATTCGAGTGGTGAAGGCACCATTCAAAATATTTGAGGCAGAATCCTTCTTTGGCTCTATGATCGGGCGTATCGTATACTAGGGAAAGTAAGCATTTGGAATATTATGATATTTTGGTGATATAACTCTTAGCTGTCTCTATGTATTTGAGGTACTTAGAACATCCCTCTTGAGTATTCTCAAGCCTAACCAACTAAAGTATTTTCTACCTTCATTCATCCTTTCCCACTCCCTATATTGGTACCAACTCCTTTGTTAAATACTAATTTTCCCTTACCATTCTGAATCTAATAATATTACTAACAATTACCTCATATGACCTTTCTATCAACCTTTACCAAGTCGGAACGATTGTTGACCACCAGATCCGCTAGTCTGCTATATTCACCCTAACCCACAAGCACAAATCCTCGGCTCACTTCTGAAACACACCTTCATATGATCTAGTCTGTTCTTGTGATCAGGTACCTACGAAGACAGTACCTGGTAGATGTTACAGAGATATTCAATATGCTAAACTGGGAAAAGAAGCGCCGGCTTTTCAAACTAGCCTATCTAGTTTTCCTCCTCTTCCTTTCTATATTTTGGTACTTCAATGTTATTGTTTGTTGTTTTTTTTTTAATCTTAAATAGTTAAATGCCTCTAACCGAATTCGCCTGATTTGTCATTGCAGGATGATATACTCTGCTTTGGAAGATGATGAATAAATAGAAACAACTGCTTGCATGCTGATGCCATCAGTTGTGAGTTGAATCCTATCCTTAAAGTACCTTCTTTTTTTTCCCCGAAGCTGCTGCACTTTGCAGATATCAATGACATTCTTGTTGAGCTGGGAACTTCGTTAACTGCCAATACTGTTCTGTAAGGTACTTTTCATGGTTGAAATATGAATTATGTCTCTCTCTCACACACACACCAACACAGCACTCACAATTTAGGAATGGCGGTTACATTGAAATCAAATTATAATGTTGCTCTATGGTGGAAGTCTCACGTTCTTTAGTTATTGTTTCTTGTAATTCTTCTTCTTGTAGCAAGTAGAAAATCATGTTTGAGAACATTATTTATATATTTGTAGACAGGATAAAGAGATTGTTTGTTGATGAAAGTATTTCTTTTCAAGTGGAACGATGCTACATTAACTTTAGGAAAGATCAGTCTAGTATGATGTCCAGTTTCCTTCAAGAACAACACAAAAATGCATAAGAGCATTGGACTCAACTGTGTAATGTCTGCAA

mRNA sequence

TTTTTTTTTTTTTTGGTATAATTTAATAAAAAGAAAACCCTTTAAAATTTGATTTCCAATAGTGTCCCTGGAAATTTGACTCCCTAGACATACGGCGGCGTTCGTCAACGACGAGATCTTCCGGTCATCCAAATCCACTTGCGTGTTCATCTTTCACGAGAATCCTGCGTGAACCTCCGAGGACTGTAGCCTTGATTGACCGCAGAAGAGGAGCATGGGGGATCTATTTGTGTGGCTTATATCATTCTTCTCCCTCGTTGCTCTTTTGATAGTCCTTGTTTATCAGCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAACCCTTATGACTCTGCCTCTAGAATAAATAAAGTGGTTATGCCGGAGTTCATTGCTATTGGAGTTTTGTGCCTCTTCTATCTTTTAACAGGGCATTGGGGTATGTCAATGTTATGTGGACCGTACATATATTATAATGTGAGACTGTACCTACGAAGACAGTACCTGGTAGATGTTACAGAGATATTCAATATGCTAAACTGGGAAAAGAAGCGCCGGCTTTTCAAACTAGCCTATCTAGTTTTCCTCCTCTTCCTTTCTATATTTTGGATGATATACTCTGCTTTGGAAGATGATGAATAAATAGAAACAACTGCTTGCATGCTGATGCCATCAGTTGTGAGTTGAATCCTATCCTTAAAGTACCTTCTTTTTTTTCCCCGAAGCTGCTGCACTTTGCAGATATCAATGACATTCTTGTTGAGCTGGGAACTTCGTTAACTGCCAATACTGTTCTGTAAGGTACTTTTCATGGTTGAAATATGAATTATGTCTCTCTCTCACACACACACCAACACAGCACTCACAATTTAGGAATGGCGGTTACATTGAAATCAAATTATAATGTTGCTCTATGGTGGAAGTCTCACGTTCTTTAGTTATTGTTTCTTGTAATTCTTCTTCTTGTAGCAAGTAGAAAATCATGTTTGAGAACATTATTTATATATTTGTAGACAGGATAAAGAGATTGTTTGTTGATGAAAGTATTTCTTTTCAAGTGGAACGATGCTACATTAACTTTAGGAAAGATCAGTCTAGTATGATGTCCAGTTTCCTTCAAGAACAACACAAAAATGCATAAGAGCATTGGACTCAACTGTGTAATGTCTGCAA

Coding sequence (CDS)

ATGGGGGATCTATTTGTGTGGCTTATATCATTCTTCTCCCTCGTTGCTCTTTTGATAGTCCTTGTTTATCAGCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAACCCTTATGACTCTGCCTCTAGAATAAATAAAGTGGTTATGCCGGAGTTCATTGCTATTGGAGTTTTGTGCCTCTTCTATCTTTTAACAGGGCATTGGGGTATGTCAATGTTATGTGGACCGTACATATATTATAATGTGAGACTGTACCTACGAAGACAGTACCTGGTAGATGTTACAGAGATATTCAATATGCTAAACTGGGAAAAGAAGCGCCGGCTTTTCAAACTAGCCTATCTAGTTTTCCTCCTCTTCCTTTCTATATTTTGGATGATATACTCTGCTTTGGAAGATGATGAATAA

Protein sequence

MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLCLFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLLFLSIFWMIYSALEDDE
Homology
[Close]
BLAST of CmaCh16G010370 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-54
Identity = 103/136 (75.74%), Postives = 122/136 (89.71%), Query Frame = 0 

Query: 1   MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLC 60
           MGD++ WLISFF L+AL+ ++VYQL+CLADLEFDYINPYDSASRIN VV+PEFI  GVLC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLL 120
           +FYLLTGHW M++LC PY+YYN  LY +RQ+LVDVTEIFN+LNWEKK+RLFKLAY+V  L
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FLSIFWMIYSALEDDE 137
           FL+IFWMIYSAL+D E
Sbjct: 121 FLTIFWMIYSALDDYE 136

[Close]
BLAST of CmaCh16G010370 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.0e-48
Identity = 91/136 (66.91%), Postives = 116/136 (85.29%), Query Frame = 0 

Query: 1   MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLC 60
           MG+++ W+ISF  L+ LL ++VYQL+ LADLEFDYINPYDSASRIN VV+PE I  G LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLL 120
           +FYL+TGHW M++LC PY+YYN  LY R+Q+L+DVTEIFN+L+WEKK+RLFKLAY++  L
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FLSIFWMIYSALEDDE 137
           FL+IFW+IYS L+D E
Sbjct: 121 FLTIFWLIYSTLDDYE 136

[Close]
BLAST of CmaCh16G010370 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 5.6e-47
Identity = 88/115 (76.52%), Postives = 103/115 (89.57%), Query Frame = 0 

Query: 22  VYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLCLFYLLTGHWGMSMLCGPYIYY 81
           ++ L+CLADLEFDYINPYDSASRIN VV+PEFI  GVLC+FYLLTGHW M++LC PY+YY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 82  NVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLLFLSIFWMIYSALEDDE 137
           N  LY +RQ+LVDVTEIFN+LNWEKK+RLFKLAY+V  LFL+IFWMIYSAL+D E
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128

[Close]
BLAST of CmaCh16G010370 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 162.9 bits (411), Expect = 2.5e-39
Identity = 72/134 (53.73%), Postives = 109/134 (81.34%), Query Frame = 0 

Query: 1   MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLC 60
           MGDL  W+ISF  L  L+I+++YQL CLADLEFD INPYD +SRIN++V+PEF   G+LC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLL 120
           L+Y+LTGHW M++L  P+++YN+RLY++R++L DVTE++N   WE+K+R++K+ ++   +
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FLSIFWMIYSALED 135
           F++ +W+I+SAL D
Sbjct: 121 FITTYWLIHSALGD 134

[Close]
BLAST of CmaCh16G010370 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.0e-29
Identity = 64/138 (46.38%), Postives = 97/138 (70.29%), Query Frame = 0 

Query: 3   DLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLCLF 62
           DLF+W++SFF  +AL+  + YQ++CL DLE DY+NP+++++RIN++V+PEFI  G LCL 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLLFL 122
           +LLT HW   ++  P   Y+  LY  R+YL+DVTE+F  +++EKK R  KL + VFL  +
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 SIFWM----IYSALEDDE 137
            +F +    +YS  EDD+
Sbjct: 124 VVFRLTLSAVYSFTEDDD 141

[Close]
BLAST of CmaCh16G010370 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 213.8 bits (543), Expect = 8.8e-56
Identity = 103/136 (75.74%), Postives = 122/136 (89.71%), Query Frame = 0 

Query: 1   MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLC 60
           MGD++ WLISFF L+AL+ ++VYQL+CLADLEFDYINPYDSASRIN VV+PEFI  GVLC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLL 120
           +FYLLTGHW M++LC PY+YYN  LY +RQ+LVDVTEIFN+LNWEKK+RLFKLAY+V  L
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FLSIFWMIYSALEDDE 137
           FL+IFWMIYSAL+D E
Sbjct: 121 FLTIFWMIYSALDDYE 136

[Close]
BLAST of CmaCh16G010370 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 191.8 bits (486), Expect = 3.6e-49
Identity = 91/136 (66.91%), Postives = 116/136 (85.29%), Query Frame = 0 

Query: 1   MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLC 60
           MG+++ W+ISF  L+ LL ++VYQL+ LADLEFDYINPYDSASRIN VV+PE I  G LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLL 120
           +FYL+TGHW M++LC PY+YYN  LY R+Q+L+DVTEIFN+L+WEKK+RLFKLAY++  L
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FLSIFWMIYSALEDDE 137
           FL+IFW+IYS L+D E
Sbjct: 121 FLTIFWLIYSTLDDYE 136

[Close]
BLAST of CmaCh16G010370 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 188.3 bits (477), Expect = 3.9e-48
Identity = 88/115 (76.52%), Postives = 103/115 (89.57%), Query Frame = 0 

Query: 22  VYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLCLFYLLTGHWGMSMLCGPYIYY 81
           ++ L+CLADLEFDYINPYDSASRIN VV+PEFI  GVLC+FYLLTGHW M++LC PY+YY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 82  NVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLLFLSIFWMIYSALEDDE 137
           N  LY +RQ+LVDVTEIFN+LNWEKK+RLFKLAY+V  LFL+IFWMIYSAL+D E
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128

[Close]
BLAST of CmaCh16G010370 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 162.9 bits (411), Expect = 1.8e-40
Identity = 72/134 (53.73%), Postives = 109/134 (81.34%), Query Frame = 0 

Query: 1   MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLC 60
           MGDL  W+ISF  L  L+I+++YQL CLADLEFD INPYD +SRIN++V+PEF   G+LC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLL 120
           L+Y+LTGHW M++L  P+++YN+RLY++R++L DVTE++N   WE+K+R++K+ ++   +
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FLSIFWMIYSALED 135
           F++ +W+I+SAL D
Sbjct: 121 FITTYWLIHSALGD 134

[Close]
BLAST of CmaCh16G010370 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 129.0 bits (323), Expect = 2.8e-30
Identity = 64/138 (46.38%), Postives = 97/138 (70.29%), Query Frame = 0 

Query: 3   DLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLCLF 62
           DLF+W++SFF  +AL+  + YQ++CL DLE DY+NP+++++RIN++V+PEFI  G LCL 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLLFL 122
           +LLT HW   ++  P   Y+  LY  R+YL+DVTE+F  +++EKK R  KL + VFL  +
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 SIFWM----IYSALEDDE 137
            +F +    +YS  EDD+
Sbjct: 124 VVFRLTLSAVYSFTEDDD 141

The following BLAST results are available for this feature:
BLAST of CmaCh16G010370 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84W041.2e-5475.74Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV... [more]
Q8GWT55.0e-4866.91Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV... [more]
Q3EDD75.6e-4776.52Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234... [more]
Q9SZ742.5e-3953.73Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV... [more]
Q9C7D74.0e-2946.38Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV... [more]
BLAST of CmaCh16G010370 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G12390.18.8e-5675.74Cornichon family protein [more]
AT1G62880.13.6e-4966.91Cornichon family protein [more]
AT1G12340.13.9e-4876.52Cornichon family protein [more]
AT4G12090.11.8e-4053.73Cornichon family protein [more]
AT3G12180.12.8e-3046.38Cornichon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003377CornichonSMARTSM01398Cornichon_2coord: 4..125
e-value: 2.6E-57
score: 206.4
IPR003377CornichonPFAMPF03311Cornichoncoord: 5..125
e-value: 4.2E-40
score: 136.8
NoneNo IPR availablePANTHERPTHR12290CORNICHON-RELATEDcoord: 1..135
NoneNo IPR availablePANTHERPTHR12290:SF39PROTEIN CORNICHON HOMOLOG 4-LIKEcoord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G010370.1CmaCh16G010370.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0016021 integral component of membrane