CmaCh16G010050 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G010050
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionF-box protein PP2-A12-like
LocationCma_Chr16: 7742864 .. 7745147 (+)
RNA-Seq ExpressionCmaCh16G010050
SyntenyCmaCh16G010050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAAATAGCGGCAAGGAGAAGCAGCCATGGATTTTAGATATATAAATATTTGAGGTTTTGGAGCAAAAAAGATTCGATTCCGCCTTCAAATTCCTCCGCCCACTTCGATTTTTAATCCCCAAACCCCAAATATCTACAATAATCATCATTCCTCGCTGTTTTCCTTCACTTTCTCACTAAACAAACACCCGCTTGATTCTTGTTTTCTCAAAAAACCGACGAATCCAAGCAACCCATCTCCTTAATTCTCTCTTTTTTTCGTATTCAATCAACCCCTTTTGATTTTTCTCTCATGATCTTCTTCCTTCTCTAATGGGTCTTAATTTCTCTTCGTTTTTTTGCCTCCGTAATGGCTCTCACCCACCGTCGCCACCGCCGTATCCCGGCCTCGGGGACTTGCCGGAGAACTGCGTGGCGGATGTTTTGGGGCATTTGAGTCCGGTGGAGATTTGTAGACTTGCGAGGTTGAATCGGGCCTTTCGTGGGGCTTCCTGGGCTGATTTCGTTTGGGATTCCAAATTGCCGTCTAATTATAGGGTTCTTGTTCAACGATTGTTTGGTGATTTTGTTCAGATTATGAGTAAAAGAGAGATTTATACGAAGCTTTGTCAACAGAATCCATTGGATGGTGGAAATAAGGTAAACTTAATTTCGAAATTAGGGCTTTGATTTCGTTGGTTTCTCTTCTGCATTGTTGATTTTGTTTTCGCTCTCGTTTCAGAAAGTTTGGCTGGATAAACATTCTGGTGGTGTTTGTTTATCGATTTCTTCCATGGATTTGAGGATTACTGGGATTGATGATCGGAGGTATTGGAATCGCATCTCCACTGAAGAATCGAGGTCAGTCAGATTCATTGGAATGAATATTTTGAATCAATCTATGCTTGTTCTTATCATTATTGTTTGAGTTTTTGCTTGCTGAATTCATGGAACATGGTTGAATGGATCTTGTTGTTCTATATTAACAGAATTATTCCAAGTTTGGTAAGAACAATGATTTGTTTTGGATATAAGTTCTTCCCTGGATTCATGTGGGAAATATGTCTGCCTCCAAAACGTATAGTTGGGGAGGAGAACCAAACATTCATTATAAGGGTGTAGAAACCTCTCCGTAGTAGTAGCGTTTTAAAAACCTTGAAGGGAAAGCCCGAAAAGGACAATATCTGCTAGCGATGCGATGGGCTTGGGCAAGCTGAGCCTTGAAGGAGGGTGGACACGAGGTAGTGTGCCAGCGATGACGTTGGGGCCCGAAGGAGGGTGGATTGTGAGAACCCATATCGGTTGGGGAGGAGAATAAAACATTATTTATAAAAGCGGGGAAACCTCTCCCTAATAGACGCGTTTTAAAAACGTTGTGGGCAAGCTTATCAAAGCGCTATAGTTATGGAATGCTTATCAAAGCGTTTTGCACATAAATTGTGTCGAAAAACAATCTTTTATGCGTATTGGTATCGGTTTCAGTTGTGTTCTTGATCAACTCATTGATATTTGAAGATCTTTTGAGGCTGATGGAACTGAAAGGATGTATATAAGTTAGTGTAATCAGTGAACTCTGTGATTTTGTCGTCTGCATCGTTGAGAGGGAACGAACTGATATCGATTTTTTCATTTTCTTGCTTAGATTCCACACTGTTGCATATCTTCAGCAAGTATGGTGGTTTGAAGTTGGTGGAGAGGTCGACTTTCCGTTTCCACCGGGAAGTTACAGTCTATACTTCAGGTTACAATTGGGTCGGACATCGAAGAGGTTTGGGCGTCGAATCTGTAACCTCGAGCACGTTCATGGTTGGAACATAAAGCCTGTGCAATTCCAGCTTTGGACTTCAGATGGTCAGCATGCTAAAACTCGATGCTATTTAGTGGAATCTGGGAAATGGACTCTGTATCGTGCAGGTAACTTCAATGTCGATGCTCGAAATGAATCGACAAGGGTCAAATTCTCTATGACTCAGATCGACTGCACGCACACGAAAGGCGGGCTGTGTTTAGATGCAGTGATGATCTGCCCGGTCGAGTACGAACAGATATCCCAGTGTCGTTGACTCGTTCGGTCTGCATTTTGTTGTAGTTAGAAAATGTGTAAAAAAACATAGGTGAGTAAGAGAGAAGAAGATTATATTTTTGATGATAGCTTCTCAAATGATGATTGGCTTTGTTTTTTGGTAAGCCTATAGTAGTTTGGGTTGGAAACGAGGGAATATTTATCGTTTTTGTTCGATAATTGTTTGATATTTTAATTTTAGATTCGATGATGATTTCACTTCATTTTCATTCTTTCGATTTA

mRNA sequence

GCAAATAGCGGCAAGGAGAAGCAGCCATGGATTTTAGATATATAAATATTTGAGGTTTTGGAGCAAAAAAGATTCGATTCCGCCTTCAAATTCCTCCGCCCACTTCGATTTTTAATCCCCAAACCCCAAATATCTACAATAATCATCATTCCTCGCTGTTTTCCTTCACTTTCTCACTAAACAAACACCCGCTTGATTCTTGTTTTCTCAAAAAACCGACGAATCCAAGCAACCCATCTCCTTAATTCTCTCTTTTTTTCGTATTCAATCAACCCCTTTTGATTTTTCTCTCATGATCTTCTTCCTTCTCTAATGGGTCTTAATTTCTCTTCGTTTTTTTGCCTCCGTAATGGCTCTCACCCACCGTCGCCACCGCCGTATCCCGGCCTCGGGGACTTGCCGGAGAACTGCGTGGCGGATGTTTTGGGGCATTTGAGTCCGGTGGAGATTTGTAGACTTGCGAGGTTGAATCGGGCCTTTCGTGGGGCTTCCTGGGCTGATTTCGTTTGGGATTCCAAATTGCCGTCTAATTATAGGGTTCTTGTTCAACGATTGTTTGGTGATTTTGTTCAGATTATGAGTAAAAGAGAGATTTATACGAAGCTTTGTCAACAGAATCCATTGGATGGTGGAAATAAGAAAGTTTGGCTGGATAAACATTCTGGTGGTGTTTGTTTATCGATTTCTTCCATGGATTTGAGGATTACTGGGATTGATGATCGGAGGTATTGGAATCGCATCTCCACTGAAGAATCGAGATTCCACACTGTTGCATATCTTCAGCAAGTATGGTGGTTTGAAGTTGGTGGAGAGGTCGACTTTCCGTTTCCACCGGGAAGTTACAGTCTATACTTCAGGTTACAATTGGGTCGGACATCGAAGAGGTTTGGGCGTCGAATCTGTAACCTCGAGCACGTTCATGGTTGGAACATAAAGCCTGTGCAATTCCAGCTTTGGACTTCAGATGGTCAGCATGCTAAAACTCGATGCTATTTAGTGGAATCTGGGAAATGGACTCTGTATCGTGCAGGTAACTTCAATGTCGATGCTCGAAATGAATCGACAAGGGTCAAATTCTCTATGACTCAGATCGACTGCACGCACACGAAAGGCGGGCTGTGTTTAGATGCAGTGATGATCTGCCCGGTCGAGTACGAACAGATATCCCAGTGTCGTTGACTCGTTCGGTCTGCATTTTGTTGTAGTTAGAAAATGTGTAAAAAAACATAGGTGAGTAAGAGAGAAGAAGATTATATTTTTGATGATAGCTTCTCAAATGATGATTGGCTTTGTTTTTTGGTAAGCCTATAGTAGTTTGGGTTGGAAACGAGGGAATATTTATCGTTTTTGTTCGATAATTGTTTGATATTTTAATTTTAGATTCGATGATGATTTCACTTCATTTTCATTCTTTCGATTTA

Coding sequence (CDS)

ATGGGTCTTAATTTCTCTTCGTTTTTTTGCCTCCGTAATGGCTCTCACCCACCGTCGCCACCGCCGTATCCCGGCCTCGGGGACTTGCCGGAGAACTGCGTGGCGGATGTTTTGGGGCATTTGAGTCCGGTGGAGATTTGTAGACTTGCGAGGTTGAATCGGGCCTTTCGTGGGGCTTCCTGGGCTGATTTCGTTTGGGATTCCAAATTGCCGTCTAATTATAGGGTTCTTGTTCAACGATTGTTTGGTGATTTTGTTCAGATTATGAGTAAAAGAGAGATTTATACGAAGCTTTGTCAACAGAATCCATTGGATGGTGGAAATAAGAAAGTTTGGCTGGATAAACATTCTGGTGGTGTTTGTTTATCGATTTCTTCCATGGATTTGAGGATTACTGGGATTGATGATCGGAGGTATTGGAATCGCATCTCCACTGAAGAATCGAGATTCCACACTGTTGCATATCTTCAGCAAGTATGGTGGTTTGAAGTTGGTGGAGAGGTCGACTTTCCGTTTCCACCGGGAAGTTACAGTCTATACTTCAGGTTACAATTGGGTCGGACATCGAAGAGGTTTGGGCGTCGAATCTGTAACCTCGAGCACGTTCATGGTTGGAACATAAAGCCTGTGCAATTCCAGCTTTGGACTTCAGATGGTCAGCATGCTAAAACTCGATGCTATTTAGTGGAATCTGGGAAATGGACTCTGTATCGTGCAGGTAACTTCAATGTCGATGCTCGAAATGAATCGACAAGGGTCAAATTCTCTATGACTCAGATCGACTGCACGCACACGAAAGGCGGGCTGTGTTTAGATGCAGTGATGATCTGCCCGGTCGAGTACGAACAGATATCCCAGTGTCGTTGA

Protein sequence

MGLNFSSFFCLRNGSHPPSPPPYPGLGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFGDFVQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDRRYWNRISTEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRICNLEHVHGWNIKPVQFQLWTSDGQHAKTRCYLVESGKWTLYRAGNFNVDARNESTRVKFSMTQIDCTHTKGGLCLDAVMICPVEYEQISQCR
Homology
BLAST of CmaCh16G010050 vs. ExPASy Swiss-Prot
Match: Q9LN77 (F-box protein PP2-A12 OS=Arabidopsis thaliana OX=3702 GN=P2A12 PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-100
Identity = 160/256 (62.50%), Postives = 202/256 (78.91%), Query Frame = 0

Query: 24  PGLGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFG 83
           PGLGDLPE CVA ++ +L PVEICR ++LNRAFRGASWAD VW+SKLP NYR +++++ G
Sbjct: 26  PGLGDLPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKILG 85

Query: 84  DFVQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDRRYWNRI 143
            F + + KR +Y  L + N  D   KKVW+DK + GVCLSIS+  L ITGIDDRRYW+ I
Sbjct: 86  GFPENLQKRHLYAFLSRINSFDDATKKVWIDKRTSGVCLSISAKGLSITGIDDRRYWSHI 145

Query: 144 STEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRICNLEHVH 203
            T+ESRF +VAYLQQ+WWFEV GE+DFPFP G+YS++FRLQLGR+ K FGRR+CN E VH
Sbjct: 146 PTDESRFSSVAYLQQIWWFEVDGEIDFPFPVGTYSIFFRLQLGRSGKWFGRRVCNTEQVH 205

Query: 204 GWNIKPVQFQLWTSDGQHAKTRCYLVESGKWTLYRAGNFNV-DARNESTRVKFSMTQIDC 263
           GW+IKPV+FQLWT DGQ++ ++C L E G W  Y AG+  V ++   ST++KFSMTQIDC
Sbjct: 206 GWDIKPVRFQLWTEDGQYSSSQCMLTERGNWIHYHAGDVVVRESNRSSTKIKFSMTQIDC 265

Query: 264 THTKGGLCLDAVMICP 279
           THTKGGL LD+V++ P
Sbjct: 266 THTKGGLSLDSVVVYP 281

BLAST of CmaCh16G010050 vs. ExPASy Swiss-Prot
Match: Q9CAN4 (F-box protein PP2-A11 OS=Arabidopsis thaliana OX=3702 GN=PP2A11 PE=1 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 5.9e-99
Identity = 158/279 (56.63%), Postives = 213/279 (76.34%), Query Frame = 0

Query: 1   MGLNFSSFFCLRNGSHPPSPPPYPGLGDLPENCVADVLGHLSPVEICRLARLNRAFRGAS 60
           MG  FS F    +  +       PGLGDLPE+CVA +L +L PVEICR ++LN AF GAS
Sbjct: 1   MGSGFSLFQKNLSSCYGDRDLLQPGLGDLPESCVALILQNLDPVEICRFSKLNTAFHGAS 60

Query: 61  WADFVWDSKLPSNYRVLVQRLFGDFVQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGV 120
           WADFVW+SKLP +Y+++++++ G F   + KR+I+T L + N  D GNKK W+DK +GG+
Sbjct: 61  WADFVWESKLPPDYKLILEKILGSFPDNLRKRDIFTFLSRVNSFDEGNKKAWVDKRTGGL 120

Query: 121 CLSISSMDLRITGIDDRRYWNRISTEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLY 180
           CL  S+  L ITGIDDRRYW+ I +++SRF +VAY+QQ+WWF+V GE+DFPFP G+YS+Y
Sbjct: 121 CLCTSAKGLSITGIDDRRYWSHIPSDDSRFASVAYVQQIWWFQVDGEIDFPFPAGTYSVY 180

Query: 181 FRLQLGRTSKRFGRRICNLEHVHGWNIKPVQFQLWTSDGQHAKTRCYLVESGKWTLYRAG 240
           FRLQLG+  KRFG ++ + E VHGWNIKPV+FQL T DGQH+ ++C L E+G W+ Y AG
Sbjct: 181 FRLQLGKPGKRFGWKVVDTEQVHGWNIKPVRFQLSTEDGQHSSSQCMLTEAGNWSHYHAG 240

Query: 241 NFNV-DARNESTRVKFSMTQIDCTHTKGGLCLDAVMICP 279
           +F V  +++ ST++KFSMTQIDCTHTKGGLC+D+V++ P
Sbjct: 241 DFVVGKSKSSSTKIKFSMTQIDCTHTKGGLCVDSVVVYP 279

BLAST of CmaCh16G010050 vs. ExPASy Swiss-Prot
Match: Q9LEX0 (F-box protein PP2-A13 OS=Arabidopsis thaliana OX=3702 GN=PP2A13 PE=1 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.8e-95
Identity = 158/257 (61.48%), Postives = 200/257 (77.82%), Query Frame = 0

Query: 26  LGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFGDF 85
           L DLPENCVA ++  L P EICRLARLNR FR AS ADF+W+SKLP+NYRV+  ++F + 
Sbjct: 25  LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEI 84

Query: 86  -VQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDRRYWNRIS 145
            +  + K+++Y KL Q N  D G K++W+DK++G +CLSISS  LRITGIDDRRYW+ I 
Sbjct: 85  TLTKLIKKDLYAKLSQPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIP 144

Query: 146 TEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRICNLEHVHG 205
           T+ESRF + AY+QQ+WWFEVGGE +  FP G+YSL+FR+QLG+TSKR GRRICN EH+HG
Sbjct: 145 TDESRFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIHG 204

Query: 206 WNIKPVQFQLWTSDGQHAKTRCYLVES-GKWTLYRAGNFNVDARNESTRVKFSMTQIDCT 265
           W+IKPV+FQL TSD Q A + CYL  + G W+ Y  G+F V   + ST +KFSMTQIDCT
Sbjct: 205 WDIKPVRFQLATSDNQQAVSLCYLNNNPGSWSHYHVGDFKVTNPDVSTGIKFSMTQIDCT 264

Query: 266 HTKGGLCLDAVMICPVE 281
           HTKGGLC+D+V+I P E
Sbjct: 265 HTKGGLCIDSVLILPKE 281

BLAST of CmaCh16G010050 vs. ExPASy Swiss-Prot
Match: Q9FJ80 (F-box protein PP2-A14 OS=Arabidopsis thaliana OX=3702 GN=PP2A14 PE=1 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.3e-85
Identity = 143/264 (54.17%), Postives = 189/264 (71.59%), Query Frame = 0

Query: 25  GLGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFGD 84
           GL D+PENC+  +  ++ P EIC LAR+N++F  AS +D VW+ KLPSNY+ LV+R+  D
Sbjct: 20  GLEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILED 79

Query: 85  FVQ-------IMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDR 144
             Q       I  K+EIY +LC+ N  D G K+ WLDK SG V L+IS   ++ITGIDDR
Sbjct: 80  QQQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKRSGKVFLAISPKAMKITGIDDR 139

Query: 145 RYWNRISTEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRIC 204
           RYW  IS++ESRF ++ YL+Q+WW E  G++ F F PG YSL F++QLG+  ++ GR+ C
Sbjct: 140 RYWEHISSDESRFGSITYLRQIWWLEAVGKIRFEFAPGKYSLLFKIQLGKPIRKCGRKTC 199

Query: 205 NLEHVHGWNIKPVQFQLWTSDGQHAKTRCYLVESGKWTLYRAGNFNVDARNESTRVKFSM 264
           +L+ VHGW+IKPV+FQL TSDGQ A +  +L ESG+W  + AG+F V+ +N    VKFSM
Sbjct: 200 SLDQVHGWDIKPVRFQLSTSDGQCAMSERHLDESGRWVYHHAGDFVVENQNSPVWVKFSM 259

Query: 265 TQIDCTHTKGGLCLDAVMICPVEY 282
            QIDCTHTKGGLCLD V+ICP EY
Sbjct: 260 LQIDCTHTKGGLCLDCVIICPFEY 283

BLAST of CmaCh16G010050 vs. ExPASy Swiss-Prot
Match: Q9LF92 (F-box protein PP2-A15 OS=Arabidopsis thaliana OX=3702 GN=PP2A15 PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 3.5e-83
Identity = 143/267 (53.56%), Postives = 185/267 (69.29%), Query Frame = 0

Query: 24  PGLGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFG 83
           PGLGD+PE+CVA V  +L+P EIC LA LNR+FRGA+ +D VW+ KLP NY+ L+  L  
Sbjct: 19  PGLGDIPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLDLLPP 78

Query: 84  DFVQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDRRYWNRI 143
           +    +SK++I+  L +  P D  NK+VW+D+ +G VC++IS+  + ITGI+DRRYWN I
Sbjct: 79  ERYHSLSKKDIFAVLSRPIPFDDDNKEVWIDRVTGRVCMAISARGMSITGIEDRRYWNWI 138

Query: 144 STEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRICNLEHVH 203
            TEESRFH VAYLQQ+WWFEV G V F  PPG YSL FR+ LGR +KR GRR+C+ E  H
Sbjct: 139 PTEESRFHVVAYLQQIWWFEVDGTVRFHLPPGVYSLSFRIHLGRFTKRLGRRVCHFELTH 198

Query: 204 GWNIKPVQFQLWTSDGQHAKTRCYLVE-----------SGKWTLYRAGNFNVDARNESTR 263
           GW++KPV+F L TSDGQ A    YL +            G W  YR G F V+    ST 
Sbjct: 199 GWDLKPVRFSLSTSDGQEASCEYYLDDVERNEALGKHKRGYWIEYRVGEFIVNGSEPSTE 258

Query: 264 VKFSMTQIDCTHTKGGLCLDAVMICPV 280
           +++SM QIDCTH+KGGLC+D+V I P+
Sbjct: 259 IQWSMKQIDCTHSKGGLCVDSVFINPI 285

BLAST of CmaCh16G010050 vs. TAIR 10
Match: AT1G12710.1 (phloem protein 2-A12 )

HSP 1 Score: 367.5 bits (942), Expect = 1.0e-101
Identity = 160/256 (62.50%), Postives = 202/256 (78.91%), Query Frame = 0

Query: 24  PGLGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFG 83
           PGLGDLPE CVA ++ +L PVEICR ++LNRAFRGASWAD VW+SKLP NYR +++++ G
Sbjct: 26  PGLGDLPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKILG 85

Query: 84  DFVQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDRRYWNRI 143
            F + + KR +Y  L + N  D   KKVW+DK + GVCLSIS+  L ITGIDDRRYW+ I
Sbjct: 86  GFPENLQKRHLYAFLSRINSFDDATKKVWIDKRTSGVCLSISAKGLSITGIDDRRYWSHI 145

Query: 144 STEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRICNLEHVH 203
            T+ESRF +VAYLQQ+WWFEV GE+DFPFP G+YS++FRLQLGR+ K FGRR+CN E VH
Sbjct: 146 PTDESRFSSVAYLQQIWWFEVDGEIDFPFPVGTYSIFFRLQLGRSGKWFGRRVCNTEQVH 205

Query: 204 GWNIKPVQFQLWTSDGQHAKTRCYLVESGKWTLYRAGNFNV-DARNESTRVKFSMTQIDC 263
           GW+IKPV+FQLWT DGQ++ ++C L E G W  Y AG+  V ++   ST++KFSMTQIDC
Sbjct: 206 GWDIKPVRFQLWTEDGQYSSSQCMLTERGNWIHYHAGDVVVRESNRSSTKIKFSMTQIDC 265

Query: 264 THTKGGLCLDAVMICP 279
           THTKGGL LD+V++ P
Sbjct: 266 THTKGGLSLDSVVVYP 281

BLAST of CmaCh16G010050 vs. TAIR 10
Match: AT1G63090.1 (phloem protein 2-A11 )

HSP 1 Score: 362.1 bits (928), Expect = 4.2e-100
Identity = 158/279 (56.63%), Postives = 213/279 (76.34%), Query Frame = 0

Query: 1   MGLNFSSFFCLRNGSHPPSPPPYPGLGDLPENCVADVLGHLSPVEICRLARLNRAFRGAS 60
           MG  FS F    +  +       PGLGDLPE+CVA +L +L PVEICR ++LN AF GAS
Sbjct: 1   MGSGFSLFQKNLSSCYGDRDLLQPGLGDLPESCVALILQNLDPVEICRFSKLNTAFHGAS 60

Query: 61  WADFVWDSKLPSNYRVLVQRLFGDFVQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGV 120
           WADFVW+SKLP +Y+++++++ G F   + KR+I+T L + N  D GNKK W+DK +GG+
Sbjct: 61  WADFVWESKLPPDYKLILEKILGSFPDNLRKRDIFTFLSRVNSFDEGNKKAWVDKRTGGL 120

Query: 121 CLSISSMDLRITGIDDRRYWNRISTEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLY 180
           CL  S+  L ITGIDDRRYW+ I +++SRF +VAY+QQ+WWF+V GE+DFPFP G+YS+Y
Sbjct: 121 CLCTSAKGLSITGIDDRRYWSHIPSDDSRFASVAYVQQIWWFQVDGEIDFPFPAGTYSVY 180

Query: 181 FRLQLGRTSKRFGRRICNLEHVHGWNIKPVQFQLWTSDGQHAKTRCYLVESGKWTLYRAG 240
           FRLQLG+  KRFG ++ + E VHGWNIKPV+FQL T DGQH+ ++C L E+G W+ Y AG
Sbjct: 181 FRLQLGKPGKRFGWKVVDTEQVHGWNIKPVRFQLSTEDGQHSSSQCMLTEAGNWSHYHAG 240

Query: 241 NFNV-DARNESTRVKFSMTQIDCTHTKGGLCLDAVMICP 279
           +F V  +++ ST++KFSMTQIDCTHTKGGLC+D+V++ P
Sbjct: 241 DFVVGKSKSSSTKIKFSMTQIDCTHTKGGLCVDSVVVYP 279

BLAST of CmaCh16G010050 vs. TAIR 10
Match: AT3G61060.1 (phloem protein 2-A13 )

HSP 1 Score: 350.5 bits (898), Expect = 1.3e-96
Identity = 158/257 (61.48%), Postives = 200/257 (77.82%), Query Frame = 0

Query: 26  LGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFGDF 85
           L DLPENCVA ++  L P EICRLARLNR FR AS ADF+W+SKLP+NYRV+  ++F + 
Sbjct: 25  LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEI 84

Query: 86  -VQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDRRYWNRIS 145
            +  + K+++Y KL Q N  D G K++W+DK++G +CLSISS  LRITGIDDRRYW+ I 
Sbjct: 85  TLTKLIKKDLYAKLSQPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIP 144

Query: 146 TEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRICNLEHVHG 205
           T+ESRF + AY+QQ+WWFEVGGE +  FP G+YSL+FR+QLG+TSKR GRRICN EH+HG
Sbjct: 145 TDESRFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIHG 204

Query: 206 WNIKPVQFQLWTSDGQHAKTRCYLVES-GKWTLYRAGNFNVDARNESTRVKFSMTQIDCT 265
           W+IKPV+FQL TSD Q A + CYL  + G W+ Y  G+F V   + ST +KFSMTQIDCT
Sbjct: 205 WDIKPVRFQLATSDNQQAVSLCYLNNNPGSWSHYHVGDFKVTNPDVSTGIKFSMTQIDCT 264

Query: 266 HTKGGLCLDAVMICPVE 281
           HTKGGLC+D+V+I P E
Sbjct: 265 HTKGGLCIDSVLILPKE 281

BLAST of CmaCh16G010050 vs. TAIR 10
Match: AT3G61060.2 (phloem protein 2-A13 )

HSP 1 Score: 345.9 bits (886), Expect = 3.1e-95
Identity = 158/258 (61.24%), Postives = 200/258 (77.52%), Query Frame = 0

Query: 26  LGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFGDF 85
           L DLPENCVA ++  L P EICRLARLNR FR AS ADF+W+SKLP+NYRV+  ++F + 
Sbjct: 25  LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEI 84

Query: 86  -VQIMSKREIYTKLCQQNPLDGGNK-KVWLDKHSGGVCLSISSMDLRITGIDDRRYWNRI 145
            +  + K+++Y KL Q N  D G K ++W+DK++G +CLSISS  LRITGIDDRRYW+ I
Sbjct: 85  TLTKLIKKDLYAKLSQPNLFDDGTKQELWIDKNTGRLCLSISSKALRITGIDDRRYWSHI 144

Query: 146 STEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRICNLEHVH 205
            T+ESRF + AY+QQ+WWFEVGGE +  FP G+YSL+FR+QLG+TSKR GRRICN EH+H
Sbjct: 145 PTDESRFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIH 204

Query: 206 GWNIKPVQFQLWTSDGQHAKTRCYLVES-GKWTLYRAGNFNVDARNESTRVKFSMTQIDC 265
           GW+IKPV+FQL TSD Q A + CYL  + G W+ Y  G+F V   + ST +KFSMTQIDC
Sbjct: 205 GWDIKPVRFQLATSDNQQAVSLCYLNNNPGSWSHYHVGDFKVTNPDVSTGIKFSMTQIDC 264

Query: 266 THTKGGLCLDAVMICPVE 281
           THTKGGLC+D+V+I P E
Sbjct: 265 THTKGGLCIDSVLILPKE 282

BLAST of CmaCh16G010050 vs. TAIR 10
Match: AT5G52120.1 (phloem protein 2-A14 )

HSP 1 Score: 317.8 bits (813), Expect = 9.1e-87
Identity = 143/264 (54.17%), Postives = 189/264 (71.59%), Query Frame = 0

Query: 25  GLGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFGD 84
           GL D+PENC+  +  ++ P EIC LAR+N++F  AS +D VW+ KLPSNY+ LV+R+  D
Sbjct: 20  GLEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILED 79

Query: 85  FVQ-------IMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDR 144
             Q       I  K+EIY +LC+ N  D G K+ WLDK SG V L+IS   ++ITGIDDR
Sbjct: 80  QQQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKRSGKVFLAISPKAMKITGIDDR 139

Query: 145 RYWNRISTEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRIC 204
           RYW  IS++ESRF ++ YL+Q+WW E  G++ F F PG YSL F++QLG+  ++ GR+ C
Sbjct: 140 RYWEHISSDESRFGSITYLRQIWWLEAVGKIRFEFAPGKYSLLFKIQLGKPIRKCGRKTC 199

Query: 205 NLEHVHGWNIKPVQFQLWTSDGQHAKTRCYLVESGKWTLYRAGNFNVDARNESTRVKFSM 264
           +L+ VHGW+IKPV+FQL TSDGQ A +  +L ESG+W  + AG+F V+ +N    VKFSM
Sbjct: 200 SLDQVHGWDIKPVRFQLSTSDGQCAMSERHLDESGRWVYHHAGDFVVENQNSPVWVKFSM 259

Query: 265 TQIDCTHTKGGLCLDAVMICPVEY 282
            QIDCTHTKGGLCLD V+ICP EY
Sbjct: 260 LQIDCTHTKGGLCLDCVIICPFEY 283

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LN771.4e-10062.50F-box protein PP2-A12 OS=Arabidopsis thaliana OX=3702 GN=P2A12 PE=2 SV=1[more]
Q9CAN45.9e-9956.63F-box protein PP2-A11 OS=Arabidopsis thaliana OX=3702 GN=PP2A11 PE=1 SV=1[more]
Q9LEX01.8e-9561.48F-box protein PP2-A13 OS=Arabidopsis thaliana OX=3702 GN=PP2A13 PE=1 SV=1[more]
Q9FJ801.3e-8554.17F-box protein PP2-A14 OS=Arabidopsis thaliana OX=3702 GN=PP2A14 PE=1 SV=1[more]
Q9LF923.5e-8353.56F-box protein PP2-A15 OS=Arabidopsis thaliana OX=3702 GN=PP2A15 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT1G12710.11.0e-10162.50phloem protein 2-A12 [more]
AT1G63090.14.2e-10056.63phloem protein 2-A11 [more]
AT3G61060.11.3e-9661.48phloem protein 2-A13 [more]
AT3G61060.23.1e-9561.24phloem protein 2-A13 [more]
AT5G52120.19.1e-8754.17phloem protein 2-A14 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025886Phloem protein 2-likePFAMPF14299PP2coord: 120..278
e-value: 6.6E-38
score: 130.0
IPR001810F-box domainPFAMPF00646F-boxcoord: 28..57
e-value: 0.0023
score: 17.8
NoneNo IPR availablePANTHERPTHR31960F-BOX PROTEIN PP2-A15coord: 1..284
NoneNo IPR availablePANTHERPTHR31960:SF22F-BOX PROTEIN PP2-A12coord: 1..284
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 17..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G010050.1CmaCh16G010050.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding