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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. AGTGCGCCATGTGGCCCCCATTGTTCTCCTCCACGTTCTTACTCGTTCTTCTTTCTAACAAATTTCCCCTTTTTTGTTTCCCCTTTCTCTGTTTTTCTCCTTCCCATATTTTGATTTTTCTCTTCTAAGTTCTTCCCCCATGGTTTTGATTCTTTCAATTCTTCTTTATTTCTATTAATTTCCCACTTCCTCAACGATCTAGGGTTTCCAATTCCCTTTAATTTCCCCTCTCTTTCGCTCTGTCCTTTCAATCCCCCTCTTCTAAACCTTCTACTCTTGGTGGGAGGTGGGGGGCTTTGAAATTCAAGGTACGTTCCCATTTCTTTCTCCTACTCTCTTCACTAAACCGCGATTAGCTTGTTAATTATTTCATGAATTTGGACTGTTTTTAAGCTTCTTCCGCTTTGCAATTTTCTGTCCCTGTTTTGCTTGTTTTACTCACGATCGAACACCCACTTTCGATTTCATTTTGGTTTCCGTTTTGTGTTTGTTTTTGTTATCTGGGTTGGTTCTGTTTTGGTTTCTATTATAATTTGTTTTTCATTACGTGGGTTGTTGATTGATTGTTTCGTCTTGTTTTTTGTTTTTTGTTTTTCTGTAGATTTAGTGCTGCTGATAGGAAGGATTGTTGTTGTCTTGATCGGACTTACATTTTGAGCATTCGGGCTGTTTGAGATCTCACTGGATTTCTCTCATGGATTTTGAAAGCGAATCTTCGGCTCTTGAATCTGTGGAAGACAATGAAGGGAACCACGACACTATTCCTTTTGATGATATCAACCGAACCAGAACCAATGGGAGTTGTGCTAATGATGCTGACCCGATGGTATCCATTTCTCCGCCTTCGAAGGGAAATGATTTAAGTGGAAAAGCTATGAATTCACAATCTCCTCCTCCCAACATTTCTTCTCCTGTAGCAAAAGGTTATGGATTGAAGAAATGGAAGCGTATCCCTAGAGATTTTGTGAAGGATATGAATTCTAGCGAAGATACTAGTAAAATTTTGAATCGGGCACTGTCCACTTCTGGGAATCCGCTTAAACCTCAACATTCTCCGACCGGGAATAAGCAAAATAACGAAGGTTTAACGCCGTTGAGGAATATCGGAAATGTTGATAGCCAATTCCATGGTTCGAGTTCCAATTCGAGGTTTGCTGCAGGGTCTGCCTTTAACCATGGAACAGATTCGGAAAACAGCGAAGATCGGAGTAGCAAATCTTCCACTGCAGCGAGTGCTCCAAAGGCGAGGTATGATCTGAATACCGTCTTAGGACATGTGCGGGAAAAGAACAGGATAAAGAACGTGAGTGGGAAAAATCCAGGTGGTTCTGGTCAAAAGGGTAATCAGGGAAAAGGACGTGCTGAAGAAAGTAAGAAGGCGAGAGGAGAAAGAATCAAAGTTGAGAAGGAGAATTCTCAGTCTAGCATTGAATCTGACTCGAGGAGCTCGTGCTTTGTCTTTAGGCAGGGCATGATTGCTACTGCTAGCAATGGAAACCAAAATGAAAGGTCCGTTACCGATGATGGAGACAACAGTGATGGAGCTTACGCAGGTGATCAACAGTTTAGTGAAGAAGTTGAAACTGCATATAGGAAAGACGACGAGGTAGAAGCTGAAGATAATTTAGCTGCTGACTTGTCTTGGGAAGTTAAGGATGAAAAGGATAGGAATCATTGGTCACCTTTGAATAAGGATCCCATGGAAGAGTCTATTCTCAGCCTCCAGTCAGCTCAATACGCGCTCGAAAAAGGTTCATATACCTTTTTTTTAAAATCTGTGGAACATTTTTCTCTATAGTTTTGTTGCTTTAGAGACGAGATTATTATGCACTCTTTCTAATCAAGAATGATGGTATTCCTTGAGCCTTCATGAACTGAGAATGAAGTAATGATTTATCATCCATCATGGCTTTCTTAGAAAGCTTGTAGATGTTGCAATCTCCTATTGTTTTCCATTTGCTTTGGCTTTTAGTTGATATTGGATACAAATTTTCTCTCGTTTGGTTTGGACAATAGTTATAAAGTGTTCTTTGTGACATATTCCATTACAATTATTGGGGAATCTTTCAGTGACGCGCATGTGAATAGACCGTAACATTTATTACGCTAGTACCTCTTACTCATCTACATTTTGTTGAGTTAGAAGTCATATAGGCTGATCACTTATGTATACGTAGAAGGGTGGGGAAACTTTGTATCGTTGGACAAGTAGACAAGTGAAGCCATTGATGCAAGAATGTAATTTTTGATGGCTAGAACGTTTTCGTTAACTTGAATATACGACATGGTGGCTATGGTGTATACCTACGTAGGATTTAATATCGTATGAGTTTCTTTGACAATCGAATGAAGTAGGCTCAAATAGTTGTCTTGTGGAAATAGTTGAGAGTACCTCATACTTGTTTATATTTTGTTGAGTTGTATGTACATTTTGCTGGGAACACCTACCAAGGATTTAATATCATACTTTCCTTGGCAACCAAATGTAGTAGGCTCAAACATTTGTCTCATGAGTTTATTCGAGGTGTCCACAAATTGGTCTGGATGCTCATGAGGTCGATTAGCTCATCATTCCACTTTGGATACGACGTTTTTAAAATTTCCTACAAACCTGATTGTTGTTTGTTTCCCTTACACACATGGAGTTTGGTTTTTATCCATCAGATCTGGTTGTTTCATGCTGGTTTTTTCTGCACTTTGTTATTTTGAGTTGAGCTAACAATGTGATATCTAATAATGCTGTTCTACACTTTCCAGAAATCAAGAAGCTAGGGGAGATAGGAAGGGACGAGATACCATCTTCCAGCATAATCGACAATACCGAACCTTCAAGTTTTGGGTATGACAACCTAGAAGCACATAAATCAAGTTCTTCTTTCCAAATGGGCTCTGGGAAGGCTGTTTCGAGTTCCTTCGAAGCCACAGTTCTTGGCTTGACAGGAAAGGTTAAATTTCTGGAGAACAAGTTAGAAGAGACAATGGCCATACTCAAATCGAAGGAATCTCGAGTTGCTGAACTGGAATCCTCCATTAGCACCAGAAAATCACCCAAGGAGGAAGGAGTAAGGGAGGAAAAAGTTAAGGAAATAGAGAAGGAATTTGAGAGGTTTTTTAAGCAAAGACTTGAAGCAGAAATTGAATATTTGGCAATAGTAAGAGCCATTGAGAATTTACAATGTGAAACATTAGTTGATGCTAAAAAAAAATTGGCTGATGAGCAAGCAGAGACGATGAACATATTTAGAGAAGCCAAAAGTAAAGCTTCGGCGCTTACGAAACGAGCAGAGGGTTTGGAGAAATGCTGTGGTGATATCTTGGATACAAAGGAGGTCTCAACGACTCAAGGGGACGTATTCAAGGTTAGTTCGTGTGCGTTTCTGCAGTTGATACTCTTGAGCTTGGTTCTTTGGGTTTTTGTCTTGCAAATGTCTTCACCTGCTGGAGTAGTTGTACCAACATAATTAAGGCTAGAAAAGGACATACATATTTTGTGAATTTATGAACAGTGTTTAAACTAAACGGCTTCGTTCCCCTTTTATCATTTTGCATAGAAAAAAAAGCAAAAAAAAGGAGGAAAAGGGGAAGGGGCAAGTAGGAATCTCAGTTGTAAGTTGTTTAATGGGTTTTTTTTCTTTGTTTCTTCTTGTAACTGATGTTGTAGTCGTGATTTTTGATAGACAACTAATAGAGCTTCTAAAAAGGTTGCAGCTACTGGTTGAATTGTTACACTGTGTTAACATCCTGGCATCATGTGCATTCCTTCATTGGGATTATACATTTCTGGCATCATATTTGAATAATGAACTTTATATTATTGATATTACTAGCTATTGGCTGTCTCTAGAGGTCGG mRNA sequence AGTGCGCCATGTGGCCCCCATTGTTCTCCTCCACGTTCTTACTCGTTCTTCTTTCTAACAAATTTCCCCTTTTTTGTTTCCCCTTTCTCTGTTTTTCTCCTTCCCATATTTTGATTTTTCTCTTCTAAGTTCTTCCCCCATGGTTTTGATTCTTTCAATTCTTCTTTATTTCTATTAATTTCCCACTTCCTCAACGATCTAGGGTTTCCAATTCCCTTTAATTTCCCCTCTCTTTCGCTCTGTCCTTTCAATCCCCCTCTTCTAAACCTTCTACTCTTGGTGGGAGGTGGGGGGCTTTGAAATTCAAGATTTAGTGCTGCTGATAGGAAGGATTGTTGTTGTCTTGATCGGACTTACATTTTGAGCATTCGGGCTGTTTGAGATCTCACTGGATTTCTCTCATGGATTTTGAAAGCGAATCTTCGGCTCTTGAATCTGTGGAAGACAATGAAGGGAACCACGACACTATTCCTTTTGATGATATCAACCGAACCAGAACCAATGGGAGTTGTGCTAATGATGCTGACCCGATGGTATCCATTTCTCCGCCTTCGAAGGGAAATGATTTAAGTGGAAAAGCTATGAATTCACAATCTCCTCCTCCCAACATTTCTTCTCCTGTAGCAAAAGGTTATGGATTGAAGAAATGGAAGCGTATCCCTAGAGATTTTGTGAAGGATATGAATTCTAGCGAAGATACTAGTAAAATTTTGAATCGGGCACTGTCCACTTCTGGGAATCCGCTTAAACCTCAACATTCTCCGACCGGGAATAAGCAAAATAACGAAGGTTTAACGCCGTTGAGGAATATCGGAAATGTTGATAGCCAATTCCATGGTTCGAGTTCCAATTCGAGGTTTGCTGCAGGGTCTGCCTTTAACCATGGAACAGATTCGGAAAACAGCGAAGATCGGAGTAGCAAATCTTCCACTGCAGCGAGTGCTCCAAAGGCGAGGTATGATCTGAATACCGTCTTAGGACATGTGCGGGAAAAGAACAGGATAAAGAACGTGAGTGGGAAAAATCCAGGTGGTTCTGGTCAAAAGGGTAATCAGGGAAAAGGACGTGCTGAAGAAAGTAAGAAGGCGAGAGGAGAAAGAATCAAAGTTGAGAAGGAGAATTCTCAGTCTAGCATTGAATCTGACTCGAGGAGCTCGTGCTTTGTCTTTAGGCAGGGCATGATTGCTACTGCTAGCAATGGAAACCAAAATGAAAGGTCCGTTACCGATGATGGAGACAACAGTGATGGAGCTTACGCAGGTGATCAACAGTTTAGTGAAGAAGTTGAAACTGCATATAGGAAAGACGACGAGGTAGAAGCTGAAGATAATTTAGCTGCTGACTTGTCTTGGGAAGTTAAGGATGAAAAGGATAGGAATCATTGGTCACCTTTGAATAAGGATCCCATGGAAGAGTCTATTCTCAGCCTCCAGTCAGCTCAATACGCGCTCGAAAAAGAAATCAAGAAGCTAGGGGAGATAGGAAGGGACGAGATACCATCTTCCAGCATAATCGACAATACCGAACCTTCAAGTTTTGGGTATGACAACCTAGAAGCACATAAATCAAGTTCTTCTTTCCAAATGGGCTCTGGGAAGGCTGTTTCGAGTTCCTTCGAAGCCACAGTTCTTGGCTTGACAGGAAAGGTTAAATTTCTGGAGAACAAGTTAGAAGAGACAATGGCCATACTCAAATCGAAGGAATCTCGAGTTGCTGAACTGGAATCCTCCATTAGCACCAGAAAATCACCCAAGGAGGAAGGAGTAAGGGAGGAAAAAGTTAAGGAAATAGAGAAGGAATTTGAGAGGTTTTTTAAGCAAAGACTTGAAGCAGAAATTGAATATTTGGCAATAGTAAGAGCCATTGAGAATTTACAATGTGAAACATTAGTTGATGCTAAAAAAAAATTGGCTGATGAGCAAGCAGAGACGATGAACATATTTAGAGAAGCCAAAAGTAAAGCTTCGGCGCTTACGAAACGAGCAGAGGGTTTGGAGAAATGCTGTGGTGATATCTTGGATACAAAGGAGGTCTCAACGACTCAAGGGGACGTATTCAAGGTTAGTTCGTGTGCGTTTCTGCAGTTGATACTCTTGAGCTTGGTTCTTTGGGTTTTTGTCTTGCAAATGTCTTCACCTGCTGGAGTAGTTGTACCAACATAATTAAGGCTAGAAAAGGACATACATATTTTGTGAATTTATGAACAGTGTTTAAACTAAACGGCTTCGTTCCCCTTTTATCATTTTGCATAGAAAAAAAAGCAAAAAAAAGGAGGAAAAGGGGAAGGGGCAAGTAGGAATCTCAGTTGTAAGTTGTTTAATGGGTTTTTTTTCTTTGTTTCTTCTTGTAACTGATGTTGTAGTCGTGATTTTTGATAGACAACTAATAGAGCTTCTAAAAAGGTTGCAGCTACTGGTTGAATTGTTACACTGTGTTAACATCCTGGCATCATGTGCATTCCTTCATTGGGATTATACATTTCTGGCATCATATTTGAATAATGAACTTTATATTATTGATATTACTAGCTATTGGCTGTCTCTAGAGGTCGG Coding sequence (CDS) ATGGATTTTGAAAGCGAATCTTCGGCTCTTGAATCTGTGGAAGACAATGAAGGGAACCACGACACTATTCCTTTTGATGATATCAACCGAACCAGAACCAATGGGAGTTGTGCTAATGATGCTGACCCGATGGTATCCATTTCTCCGCCTTCGAAGGGAAATGATTTAAGTGGAAAAGCTATGAATTCACAATCTCCTCCTCCCAACATTTCTTCTCCTGTAGCAAAAGGTTATGGATTGAAGAAATGGAAGCGTATCCCTAGAGATTTTGTGAAGGATATGAATTCTAGCGAAGATACTAGTAAAATTTTGAATCGGGCACTGTCCACTTCTGGGAATCCGCTTAAACCTCAACATTCTCCGACCGGGAATAAGCAAAATAACGAAGGTTTAACGCCGTTGAGGAATATCGGAAATGTTGATAGCCAATTCCATGGTTCGAGTTCCAATTCGAGGTTTGCTGCAGGGTCTGCCTTTAACCATGGAACAGATTCGGAAAACAGCGAAGATCGGAGTAGCAAATCTTCCACTGCAGCGAGTGCTCCAAAGGCGAGGTATGATCTGAATACCGTCTTAGGACATGTGCGGGAAAAGAACAGGATAAAGAACGTGAGTGGGAAAAATCCAGGTGGTTCTGGTCAAAAGGGTAATCAGGGAAAAGGACGTGCTGAAGAAAGTAAGAAGGCGAGAGGAGAAAGAATCAAAGTTGAGAAGGAGAATTCTCAGTCTAGCATTGAATCTGACTCGAGGAGCTCGTGCTTTGTCTTTAGGCAGGGCATGATTGCTACTGCTAGCAATGGAAACCAAAATGAAAGGTCCGTTACCGATGATGGAGACAACAGTGATGGAGCTTACGCAGGTGATCAACAGTTTAGTGAAGAAGTTGAAACTGCATATAGGAAAGACGACGAGGTAGAAGCTGAAGATAATTTAGCTGCTGACTTGTCTTGGGAAGTTAAGGATGAAAAGGATAGGAATCATTGGTCACCTTTGAATAAGGATCCCATGGAAGAGTCTATTCTCAGCCTCCAGTCAGCTCAATACGCGCTCGAAAAAGAAATCAAGAAGCTAGGGGAGATAGGAAGGGACGAGATACCATCTTCCAGCATAATCGACAATACCGAACCTTCAAGTTTTGGGTATGACAACCTAGAAGCACATAAATCAAGTTCTTCTTTCCAAATGGGCTCTGGGAAGGCTGTTTCGAGTTCCTTCGAAGCCACAGTTCTTGGCTTGACAGGAAAGGTTAAATTTCTGGAGAACAAGTTAGAAGAGACAATGGCCATACTCAAATCGAAGGAATCTCGAGTTGCTGAACTGGAATCCTCCATTAGCACCAGAAAATCACCCAAGGAGGAAGGAGTAAGGGAGGAAAAAGTTAAGGAAATAGAGAAGGAATTTGAGAGGTTTTTTAAGCAAAGACTTGAAGCAGAAATTGAATATTTGGCAATAGTAAGAGCCATTGAGAATTTACAATGTGAAACATTAGTTGATGCTAAAAAAAAATTGGCTGATGAGCAAGCAGAGACGATGAACATATTTAGAGAAGCCAAAAGTAAAGCTTCGGCGCTTACGAAACGAGCAGAGGGTTTGGAGAAATGCTGTGGTGATATCTTGGATACAAAGGAGGTCTCAACGACTCAAGGGGACGTATTCAAGGTTAGTTCGTGTGCGTTTCTGCAGTTGATACTCTTGAGCTTGGTTCTTTGGGTTTTTGTCTTGCAAATGTCTTCACCTGCTGGAGTAGTTGTACCAACATAA Protein sequence MDFESESSALESVEDNEGNHDTIPFDDINRTRTNGSCANDADPMVSISPPSKGNDLSGKAMNSQSPPPNISSPVAKGYGLKKWKRIPRDFVKDMNSSEDTSKILNRALSTSGNPLKPQHSPTGNKQNNEGLTPLRNIGNVDSQFHGSSSNSRFAAGSAFNHGTDSENSEDRSSKSSTAASAPKARYDLNTVLGHVREKNRIKNVSGKNPGGSGQKGNQGKGRAEESKKARGERIKVEKENSQSSIESDSRSSCFVFRQGMIATASNGNQNERSVTDDGDNSDGAYAGDQQFSEEVETAYRKDDEVEAEDNLAADLSWEVKDEKDRNHWSPLNKDPMEESILSLQSAQYALEKEIKKLGEIGRDEIPSSSIIDNTEPSSFGYDNLEAHKSSSSFQMGSGKAVSSSFEATVLGLTGKVKFLENKLEETMAILKSKESRVAELESSISTRKSPKEEGVREEKVKEIEKEFERFFKQRLEAEIEYLAIVRAIENLQCETLVDAKKKLADEQAETMNIFREAKSKASALTKRAEGLEKCCGDILDTKEVSTTQGDVFKVSSCAFLQLILLSLVLWVFVLQMSSPAGVVVPT
Homology
BLAST of CmaCh16G009980 vs. ExPASy Swiss-Prot
Match: Q9FH18 (WPP domain-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 3.7e-47 Identity = 204/582 (35.05%), Postives = 297/582 (51.03%), Query Frame = 0
Query: 1 MDFESESSALESVEDNEGNHDTIPFDDINRTRTNGSCANDADPMVSISPPSKGNDLSGKA 60
MD ESESS LESVEDN G D D K
Sbjct: 1 MDLESESSVLESVEDNNG------------------LIGDLD----------------KE 60
Query: 61 MNSQSPPPNISSPVAKGYGLKKWK-RIPRDFVKDMNS-SEDTSKILNRALSTSGNP-LKP 120
+NS P S ++KG+GL+KWK R+ RD VKD S S + SK L R LS +P K
Sbjct: 61 LNS---PVETSPLISKGFGLRKWKRRLRRDLVKDDTSVSMENSKALKRVLSGLVDPNAKQ 120
Query: 121 QHSPTGN-KQNNEGLTPLRNIGNVDSQFHGSSSNSRFAAGSAFNHGTDSENSEDRSSKSS 180
H P +Q++ G ++G+V+S + G AF G DS+NSEDRSS
Sbjct: 121 MHLPGPEVRQDSVG-----SVGSVNSVVGFVMGGESYGNGLAFAAGVDSDNSEDRSS--- 180
Query: 181 TAASAPKARYDLNTVLGHVREKNRIKNVSGKNPGGSGQKGNQGKGRAEESKKARGERIKV 240
+ H +K+R K GK+ SG Q K E+S K RGERIK+
Sbjct: 181 --------------TMSHSWDKHRGKVSGGKSVISSGDSSQQRKSSVEKSNKLRGERIKI 240
Query: 241 EKENSQSSIES-DSRSSCFVFRQGMIATASNGNQNERSVTD-DGDNSDGAYAGDQQFSEE 300
EKENS SS+ES DSRSS FVF QG + S+ Q R + D D +NSD +
Sbjct: 241 EKENSHSSMESADSRSSNFVFMQGASYSLSSREQGGRRMMDYDDENSD----------HD 300
Query: 301 VETAYRKDDEVEAEDNLAADLSWE--VKDEKDRNHWSPLNKDPMEESILSLQSAQYALEK 360
T+ RKD+ VE E+ D S V++ + +++ S N DP+ ++ S Q+ Q AL+K
Sbjct: 301 AHTSKRKDN-VEEEEEETEDYSQGDCVEESQIKSNGSSDNLDPLIVAVNSFQTLQEALQK 360
Query: 361 EIKKLGEIGRDEIPSSSIIDNTEPSSFGYDNLE-AHKSSSSFQMGS---GKAVSSSFEAT 420
E++K E+G++E P +S+ D E SS + E A ++SSS++ GS G+ +S ++
Sbjct: 361 ELQKFQELGKEE-PITSLHDGGESSSCIHAGHEGASEASSSYRFGSEKMGEMELTSLDSE 420
Query: 421 VLGLTGKVKFLENKLEETMAILKSKESRVAELESSISTRKSPKEEGVREEKVKEIEKEFE 480
+L L V+ LE KLEE IL+ KE+++ ELES+I+ V E E E
Sbjct: 421 ILNLVNNVEHLEIKLEEAKRILEVKETQIRELESTIN---------VSETCNGGTEIGIE 480
Query: 481 RFFKQRLEAEIEYLAIVRAIENLQCETLVDAKKKLADEQAETMNIFREAKSKASALTKRA 540
F+Q++EAEIEY+ R++ NL+ K + +E+ ++ +A++KA L +A
Sbjct: 481 DIFQQKVEAEIEYIIFSRSVGNLKRRI-----KLIEEEKTLGLSKLDKAETKAENLKNQA 497
Query: 541 EGLEKCCGDILDTKEVSTTQGDVFKVSSCAFLQLILLSLVLW 571
+ L+ C +I + +EV + FK + C LQL LL ++ +
Sbjct: 541 QDLQNHCVEITEIQEVECLKKRAFKTTRCLLLQLGLLFILYY 497
BLAST of CmaCh16G009980 vs. ExPASy Swiss-Prot
Match: Q8GXA4 (WPP domain-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=WIP1 PE=1 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 2.1e-42 Identity = 201/598 (33.61%), Postives = 286/598 (47.83%), Query Frame = 0
Query: 1 MDFESESSALESVEDNE-GNHDTIPFDDINRTRTNGSCANDADPMVSISPPSKGNDLSGK 60
MD ESESSALESV+DN D R+ NGSC++++ ++S S + GK
Sbjct: 1 MDLESESSALESVDDNVLIQQSASNVCDDGRSLDNGSCSDESVKLLSTSNSVE----LGK 60
Query: 61 AMNSQSPPP--NISSPVAKGYGLKKWKRIPRDFVKDMNSSEDTSKILNRALS--TSGNPL 120
M+ SP SPV KG GL+KW+RI RD VKD +++ + SK L R LS +
Sbjct: 61 PMSFDSPGDGGGAYSPVLKGQGLRKWRRIRRDLVKDTSANMENSKALKRGLSGVAHSHGK 120
Query: 121 KPQHSPTGNKQNNEG----LTPLRNIGNVDSQFHGSSSNSRFAAGSAFNHGTDSENSEDR 180
+ Q +Q ++G + L++ G+ S +SRF AG F+ G D E +DR
Sbjct: 121 QMQFQSPEVEQESQGSVGSVNMLKSSGDGFDILGSSGYDSRFVAGVGFSAGMDLEIDDDR 180
Query: 181 SSKSSTAASAPKA-RYDLNTVLGHVREKNRIKNVSGKNPGGSGQKGNQGKGRAEESKKAR 240
SSKSST A APK RY EK I SGQ GN R E SKK R
Sbjct: 181 SSKSSTVARAPKVIRY----------EKPMI---------SSGQGGNI---RVENSKKHR 240
Query: 241 GERIKVEKENSQSSIESDSRSSCFVFRQGMIATASNGNQNERSVTDDGDNSDGAYAGDQQ 300
GE + EKENS SS+ESDSR +Q NG E S+ D +G
Sbjct: 241 GESVDFEKENSYSSLESDSR------KQSGRMMDYNGENGETSMRKDDAGGEG------- 300
Query: 301 FSEEVETAYRKDDEVEAEDNLAADLSWEVKDEKDRNHWSPLNKDPMEESILSLQSAQYAL 360
E + T R DE+ DP+ E+I + Q AL
Sbjct: 301 -GESINTDNRYSDEM----------------------------DPLTEAINGFLALQDAL 360
Query: 361 EKEIKKLGEIGRDEIPSSSIIDNTEPSSFGYDNLEAHKSSSSFQMGSGKAVSSSFEATVL 420
EKE+++ EIG + +P + H+ S ++S ++
Sbjct: 361 EKEVQQFQEIGNEPMP------------------QHHEQVSE---------ANSPHPEIV 420
Query: 421 GLTGKVKFLENKLEETMAILKSKESRVAELESSISTRKSPKEEGVREEKVKEIEKEFERF 480
L V+ LEN LEET ++L+ KES + +LES +T +S G E V++I
Sbjct: 421 TLVNNVEQLENMLEETRSMLEVKESHIRDLES--TTNQSKHSWGGTEIVVEDI------- 480
Query: 481 FKQRLEAEIEYLAIVRAIENLQCE-TLVDAKKKLADEQA-ETMNIFREAKSKASALTKRA 540
F+Q++EAEIEYL R+I+NL + L+D ++ LA+EQ ET+N ++KA+ T RA
Sbjct: 481 FRQKIEAEIEYLIYSRSIDNLNSQMKLIDEQESLAEEQTHETLNKLGRVQTKAANFTNRA 489
Query: 541 EGLEKCCGDILDTKEVSTTQGDVFKVSSCAFLQLILLSLVLWVFVLQMSSPAGVVVPT 587
+ L+ C +I T + K++S +QL+LLS V+ + + Q+ VVPT
Sbjct: 541 QDLQNDCIEI-----TGTIKKRACKITSYVLIQLVLLSTVVLLLLSQLLPEPDTVVPT 489
BLAST of CmaCh16G009980 vs. ExPASy Swiss-Prot
Match: Q94AV5 (WPP domain-interacting protein 3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=1 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 6.8e-25 Identity = 140/456 (30.70%), Postives = 214/456 (46.93%), Query Frame = 0
Query: 57 SGKAMNSQSPPPNISSPVAKGYGLKKWKRIPRDF-VKDMNSS-EDTSKILNRALSTSGNP 116
S + NS P KG+GLKKW+RI RD V+D + +D SK+L R L+ NP
Sbjct: 36 SPQRSNSVESPGGSVHSTRKGFGLKKWRRIKRDGPVRDEAAPVDDGSKLLKRGLAGLVNP 95
Query: 117 LKP--QHSPTGNKQNNEGLTPLRNIGNVDSQFHGSSSNS-------RFAAGSAFNHGTDS 176
+ S +Q++EG ++G+V+ H +N FA G AF
Sbjct: 96 PSKHVEFSSVEARQSSEG-----SVGSVNMVHHPGVANGFSPDIGCMFAVGQAF------ 155
Query: 177 ENSEDRSSKSSTAASAPKARYDLNTVLGHVREKNRIKNVSGKNPGGSGQKGNQGKGRAEE 236
E SE+ S NT+ G KNV GG G+Q K ++
Sbjct: 156 EKSEEHSG---------------NTIGG--------KNV----VGGKVVSGSQEKLWSDT 215
Query: 237 SKKARGERIKVEKENSQSSIESDSRSSCFVFRQGMIATASNGNQNERSVTDDGDNSDGAY 296
K+A ER +EKE SS++SD RSS FVF G ++ ++G ++ER N G +
Sbjct: 216 IKRASEERGDIEKEKPCSSLDSDLRSSDFVFSTGSVSVGNHGEKDERLTM----NYIGGF 275
Query: 297 AGDQQFSEEVETAYRKDDEVEAEDNLAADLSWEVKDEKDRNHWSPLNKDPMEESILSLQS 356
+ + Q EEV+T R ++ + +D + +K+ NHW+ +KD + +SI S
Sbjct: 276 SNEGQVKEEVQTYSRSENGNKEDDG---------ESKKNNNHWA--DKDALADSIRSFAV 335
Query: 357 AQYALEKEIKKLGEIGRDEIPSSSIIDNTEPSSFGYDNLEAHKSSSSFQMGSGKAVSSSF 416
Q L KE++ E+G++ + S D + N + S+SS
Sbjct: 336 LQEVLWKEVQSFQELGKESVLLHSNTDELSSDQPSHQNCKEDNSTSS------------- 395
Query: 417 EATVLGLTGKVKFLENKLEETMAILKSKESRVAELESSISTRKSPKEEGVREEKVKEIEK 476
+ L L KVK LE+KLEE A L++KE+R+ ELE+S +IE
Sbjct: 396 GSKALILKEKVKLLEHKLEEARAALEAKEARIQELENS------------------KIES 405
Query: 477 EFERFFKQRLEAEIEYLAIVRAIENLQCETLVDAKK 502
E E F++++E EIE+L + R++ +LQ L + KK
Sbjct: 456 ELECIFQRKIETEIEHLMLTRSLSSLQ--VLQETKK 405
BLAST of CmaCh16G009980 vs. TAIR 10
Match: AT5G56210.1 (WPP domain interacting protein 2 ) HSP 1 Score: 191.0 bits (484), Expect = 2.6e-48 Identity = 204/582 (35.05%), Postives = 297/582 (51.03%), Query Frame = 0
Query: 1 MDFESESSALESVEDNEGNHDTIPFDDINRTRTNGSCANDADPMVSISPPSKGNDLSGKA 60
MD ESESS LESVEDN G D D K
Sbjct: 1 MDLESESSVLESVEDNNG------------------LIGDLD----------------KE 60
Query: 61 MNSQSPPPNISSPVAKGYGLKKWK-RIPRDFVKDMNS-SEDTSKILNRALSTSGNP-LKP 120
+NS P S ++KG+GL+KWK R+ RD VKD S S + SK L R LS +P K
Sbjct: 61 LNS---PVETSPLISKGFGLRKWKRRLRRDLVKDDTSVSMENSKALKRVLSGLVDPNAKQ 120
Query: 121 QHSPTGN-KQNNEGLTPLRNIGNVDSQFHGSSSNSRFAAGSAFNHGTDSENSEDRSSKSS 180
H P +Q++ G ++G+V+S + G AF G DS+NSEDRSS
Sbjct: 121 MHLPGPEVRQDSVG-----SVGSVNSVVGFVMGGESYGNGLAFAAGVDSDNSEDRSS--- 180
Query: 181 TAASAPKARYDLNTVLGHVREKNRIKNVSGKNPGGSGQKGNQGKGRAEESKKARGERIKV 240
+ H +K+R K GK+ SG Q K E+S K RGERIK+
Sbjct: 181 --------------TMSHSWDKHRGKVSGGKSVISSGDSSQQRKSSVEKSNKLRGERIKI 240
Query: 241 EKENSQSSIES-DSRSSCFVFRQGMIATASNGNQNERSVTD-DGDNSDGAYAGDQQFSEE 300
EKENS SS+ES DSRSS FVF QG + S+ Q R + D D +NSD +
Sbjct: 241 EKENSHSSMESADSRSSNFVFMQGASYSLSSREQGGRRMMDYDDENSD----------HD 300
Query: 301 VETAYRKDDEVEAEDNLAADLSWE--VKDEKDRNHWSPLNKDPMEESILSLQSAQYALEK 360
T+ RKD+ VE E+ D S V++ + +++ S N DP+ ++ S Q+ Q AL+K
Sbjct: 301 AHTSKRKDN-VEEEEEETEDYSQGDCVEESQIKSNGSSDNLDPLIVAVNSFQTLQEALQK 360
Query: 361 EIKKLGEIGRDEIPSSSIIDNTEPSSFGYDNLE-AHKSSSSFQMGS---GKAVSSSFEAT 420
E++K E+G++E P +S+ D E SS + E A ++SSS++ GS G+ +S ++
Sbjct: 361 ELQKFQELGKEE-PITSLHDGGESSSCIHAGHEGASEASSSYRFGSEKMGEMELTSLDSE 420
Query: 421 VLGLTGKVKFLENKLEETMAILKSKESRVAELESSISTRKSPKEEGVREEKVKEIEKEFE 480
+L L V+ LE KLEE IL+ KE+++ ELES+I+ V E E E
Sbjct: 421 ILNLVNNVEHLEIKLEEAKRILEVKETQIRELESTIN---------VSETCNGGTEIGIE 480
Query: 481 RFFKQRLEAEIEYLAIVRAIENLQCETLVDAKKKLADEQAETMNIFREAKSKASALTKRA 540
F+Q++EAEIEY+ R++ NL+ K + +E+ ++ +A++KA L +A
Sbjct: 481 DIFQQKVEAEIEYIIFSRSVGNLKRRI-----KLIEEEKTLGLSKLDKAETKAENLKNQA 497
Query: 541 EGLEKCCGDILDTKEVSTTQGDVFKVSSCAFLQLILLSLVLW 571
+ L+ C +I + +EV + FK + C LQL LL ++ +
Sbjct: 541 QDLQNHCVEITEIQEVECLKKRAFKTTRCLLLQLGLLFILYY 497
BLAST of CmaCh16G009980 vs. TAIR 10
Match: AT4G26455.1 (WPP domain interacting protein 1 ) HSP 1 Score: 175.3 bits (443), Expect = 1.5e-43 Identity = 201/598 (33.61%), Postives = 286/598 (47.83%), Query Frame = 0
Query: 1 MDFESESSALESVEDNE-GNHDTIPFDDINRTRTNGSCANDADPMVSISPPSKGNDLSGK 60
MD ESESSALESV+DN D R+ NGSC++++ ++S S + GK
Sbjct: 1 MDLESESSALESVDDNVLIQQSASNVCDDGRSLDNGSCSDESVKLLSTSNSVE----LGK 60
Query: 61 AMNSQSPPP--NISSPVAKGYGLKKWKRIPRDFVKDMNSSEDTSKILNRALS--TSGNPL 120
M+ SP SPV KG GL+KW+RI RD VKD +++ + SK L R LS +
Sbjct: 61 PMSFDSPGDGGGAYSPVLKGQGLRKWRRIRRDLVKDTSANMENSKALKRGLSGVAHSHGK 120
Query: 121 KPQHSPTGNKQNNEG----LTPLRNIGNVDSQFHGSSSNSRFAAGSAFNHGTDSENSEDR 180
+ Q +Q ++G + L++ G+ S +SRF AG F+ G D E +DR
Sbjct: 121 QMQFQSPEVEQESQGSVGSVNMLKSSGDGFDILGSSGYDSRFVAGVGFSAGMDLEIDDDR 180
Query: 181 SSKSSTAASAPKA-RYDLNTVLGHVREKNRIKNVSGKNPGGSGQKGNQGKGRAEESKKAR 240
SSKSST A APK RY EK I SGQ GN R E SKK R
Sbjct: 181 SSKSSTVARAPKVIRY----------EKPMI---------SSGQGGNI---RVENSKKHR 240
Query: 241 GERIKVEKENSQSSIESDSRSSCFVFRQGMIATASNGNQNERSVTDDGDNSDGAYAGDQQ 300
GE + EKENS SS+ESDSR +Q NG E S+ D +G
Sbjct: 241 GESVDFEKENSYSSLESDSR------KQSGRMMDYNGENGETSMRKDDAGGEG------- 300
Query: 301 FSEEVETAYRKDDEVEAEDNLAADLSWEVKDEKDRNHWSPLNKDPMEESILSLQSAQYAL 360
E + T R DE+ DP+ E+I + Q AL
Sbjct: 301 -GESINTDNRYSDEM----------------------------DPLTEAINGFLALQDAL 360
Query: 361 EKEIKKLGEIGRDEIPSSSIIDNTEPSSFGYDNLEAHKSSSSFQMGSGKAVSSSFEATVL 420
EKE+++ EIG + +P + H+ S ++S ++
Sbjct: 361 EKEVQQFQEIGNEPMP------------------QHHEQVSE---------ANSPHPEIV 420
Query: 421 GLTGKVKFLENKLEETMAILKSKESRVAELESSISTRKSPKEEGVREEKVKEIEKEFERF 480
L V+ LEN LEET ++L+ KES + +LES +T +S G E V++I
Sbjct: 421 TLVNNVEQLENMLEETRSMLEVKESHIRDLES--TTNQSKHSWGGTEIVVEDI------- 480
Query: 481 FKQRLEAEIEYLAIVRAIENLQCE-TLVDAKKKLADEQA-ETMNIFREAKSKASALTKRA 540
F+Q++EAEIEYL R+I+NL + L+D ++ LA+EQ ET+N ++KA+ T RA
Sbjct: 481 FRQKIEAEIEYLIYSRSIDNLNSQMKLIDEQESLAEEQTHETLNKLGRVQTKAANFTNRA 489
Query: 541 EGLEKCCGDILDTKEVSTTQGDVFKVSSCAFLQLILLSLVLWVFVLQMSSPAGVVVPT 587
+ L+ C +I T + K++S +QL+LLS V+ + + Q+ VVPT
Sbjct: 541 QDLQNDCIEI-----TGTIKKRACKITSYVLIQLVLLSTVVLLLLSQLLPEPDTVVPT 489
BLAST of CmaCh16G009980 vs. TAIR 10
Match: AT3G13360.1 (WPP domain interacting protein 3 ) HSP 1 Score: 117.1 bits (292), Expect = 4.8e-26 Identity = 140/456 (30.70%), Postives = 214/456 (46.93%), Query Frame = 0
Query: 57 SGKAMNSQSPPPNISSPVAKGYGLKKWKRIPRDF-VKDMNSS-EDTSKILNRALSTSGNP 116
S + NS P KG+GLKKW+RI RD V+D + +D SK+L R L+ NP
Sbjct: 36 SPQRSNSVESPGGSVHSTRKGFGLKKWRRIKRDGPVRDEAAPVDDGSKLLKRGLAGLVNP 95
Query: 117 LKP--QHSPTGNKQNNEGLTPLRNIGNVDSQFHGSSSNS-------RFAAGSAFNHGTDS 176
+ S +Q++EG ++G+V+ H +N FA G AF
Sbjct: 96 PSKHVEFSSVEARQSSEG-----SVGSVNMVHHPGVANGFSPDIGCMFAVGQAF------ 155
Query: 177 ENSEDRSSKSSTAASAPKARYDLNTVLGHVREKNRIKNVSGKNPGGSGQKGNQGKGRAEE 236
E SE+ S NT+ G KNV GG G+Q K ++
Sbjct: 156 EKSEEHSG---------------NTIGG--------KNV----VGGKVVSGSQEKLWSDT 215
Query: 237 SKKARGERIKVEKENSQSSIESDSRSSCFVFRQGMIATASNGNQNERSVTDDGDNSDGAY 296
K+A ER +EKE SS++SD RSS FVF G ++ ++G ++ER N G +
Sbjct: 216 IKRASEERGDIEKEKPCSSLDSDLRSSDFVFSTGSVSVGNHGEKDERLTM----NYIGGF 275
Query: 297 AGDQQFSEEVETAYRKDDEVEAEDNLAADLSWEVKDEKDRNHWSPLNKDPMEESILSLQS 356
+ + Q EEV+T R ++ + +D + +K+ NHW+ +KD + +SI S
Sbjct: 276 SNEGQVKEEVQTYSRSENGNKEDDG---------ESKKNNNHWA--DKDALADSIRSFAV 335
Query: 357 AQYALEKEIKKLGEIGRDEIPSSSIIDNTEPSSFGYDNLEAHKSSSSFQMGSGKAVSSSF 416
Q L KE++ E+G++ + S D + N + S+SS
Sbjct: 336 LQEVLWKEVQSFQELGKESVLLHSNTDELSSDQPSHQNCKEDNSTSS------------- 395
Query: 417 EATVLGLTGKVKFLENKLEETMAILKSKESRVAELESSISTRKSPKEEGVREEKVKEIEK 476
+ L L KVK LE+KLEE A L++KE+R+ ELE+S +IE
Sbjct: 396 GSKALILKEKVKLLEHKLEEARAALEAKEARIQELENS------------------KIES 405
Query: 477 EFERFFKQRLEAEIEYLAIVRAIENLQCETLVDAKK 502
E E F++++E EIE+L + R++ +LQ L + KK
Sbjct: 456 ELECIFQRKIETEIEHLMLTRSLSSLQ--VLQETKK 405
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9FH18 | 3.7e-47 | 35.05 | WPP domain-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV... | [more] |
| Q8GXA4 | 2.1e-42 | 33.61 | WPP domain-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=WIP1 PE=1 SV... | [more] |
| Q94AV5 | 6.8e-25 | 30.70 | WPP domain-interacting protein 3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=1 SV... | [more] |
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 460..480 |
| None | No IPR available | COILS | Coil | Coil | coord: 416..443 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 50..71 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 220..244 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 91..333 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 97..163 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..76 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 245..274 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 294..332 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 13..27 |
| None | No IPR available | PANTHER | PTHR34562:SF8 | WPP DOMAIN-INTERACTING PROTEIN 2 | coord: 32..586 |
| IPR044696 | WPP domain-interacting protein 1/2/3 | PANTHER | PTHR34562 | WPP DOMAIN-INTERACTING PROTEIN 2 | coord: 32..586 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
|
