CmaCh16G009860 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G009860
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Subtilisin-like protease family protein
Location	Cma_Chr16: 7591915 .. 7592130 (-)
RNA-Seq Expression	CmaCh16G009860
Synteny	CmaCh16G009860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATAATGTCCTTCCATGCCGTGAAGAATGACATCACTGTTGTTTGTTCGGCTGGAAATTCAGGACCAACTGGAAGCATGGTCTCAAATGTCGCACCATGGATGATAAATGTGGGAGTTAGCACAATTGACAGGCTTTTTACCACTTATGTGGTGTTGGGAGACAAGAGGCGCTTGAAGATACTCTATCCGACACTTATTAGTACTATATAG

mRNA sequence

ATGGCTATAATGTCCTTCCATGCCGTGAAGAATGACATCACTGTTGTTTGTTCGGCTGGAAATTCAGGACCAACTGGAAGCATGGTCTCAAATGTCGCACCATGGATGATAAATGTGGGAGTTAGCACAATTGACAGGCTTTTTACCACTTATGTGGTGTTGGGAGACAAGAGGCGCTTGAAGATACTCTATCCGACACTTATTAGTACTATATAG

Coding sequence (CDS)

ATGGCTATAATGTCCTTCCATGCCGTGAAGAATGACATCACTGTTGTTTGTTCGGCTGGAAATTCAGGACCAACTGGAAGCATGGTCTCAAATGTCGCACCATGGATGATAAATGTGGGAGTTAGCACAATTGACAGGCTTTTTACCACTTATGTGGTGTTGGGAGACAAGAGGCGCTTGAAGATACTCTATCCGACACTTATTAGTACTATATAG

Protein sequence

MAIMSFHAVKNDITVVCSAGNSGPTGSMVSNVAPWMINVGVSTIDRLFTTYVVLGDKRRLKILYPTLISTI

Homology

[Close]

BLAST of CmaCh16G009860 vs. ExPASy Swiss-Prot
Match: Q9ZSP5 (Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana OX=3702 GN=AIR3 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.7e-13
Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 1   MAIMSFHAVKNDITVVCSAGNSGPTGSMVSNVAPWMINVGVSTIDRLFTTYVVLGDKRRL 60
           +AI SFHA K  I VVCSAGNSGP  S VSNVAPW I VG ST+DR F + +VLG+ +  
Sbjct: 309 VAIGSFHAAKKRIVVVCSAGNSGPADSTVSNVAPWQITVGASTMDREFASNLVLGNGKHY 368

Query: 61  K 62
           K
Sbjct: 369 K 369

[Close]

BLAST of CmaCh16G009860 vs. ExPASy Swiss-Prot
Match: F4JXC5 (Subtilisin-like protease SBT5.4 OS=Arabidopsis thaliana OX=3702 GN=SBT5.4 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.6e-13
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 1   MAIMSFHAVKNDITVVCSAGNSGPTGSMVSNVAPWMINVGVSTIDRLFTTYVVLGDKRRL 60
           +AI SFHAVKN +TVVCSAGNSGP    VSNVAPW+I VG S++DR F  +V L + +  
Sbjct: 316 IAIGSFHAVKNGVTVVCSAGNSGPKSGTVSNVAPWVITVGASSMDREFQAFVELKNGQSF 375

Query: 61  K 62
           K
Sbjct: 376 K 376

[Close]

BLAST of CmaCh16G009860 vs. ExPASy Swiss-Prot
Match: F4HSQ2 (Subtilisin-like protease SBT5.1 OS=Arabidopsis thaliana OX=3702 GN=SBT5.1 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-11
Identity = 36/61 (59.02%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 1   MAIMSFHAVKNDITVVCSAGNSGPTGSMVSNVAPWMINVGVSTIDRLFTTYVVL-GDKRR 60
           ++I SFHAV+  ITVVCS GNSGP+   V N APWMI V  STIDR F + ++L GD+ R
Sbjct: 297 LSIGSFHAVERGITVVCSVGNSGPSSQSVFNAAPWMITVAASTIDRGFESNILLGGDENR 356

[Close]

BLAST of CmaCh16G009860 vs. ExPASy Swiss-Prot
Match: Q9LNU1 (CO(2)-response secreted protease OS=Arabidopsis thaliana OX=3702 GN=CRSP PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.5e-11
Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 1   MAIMSFHAVKNDITVVCSAGNSGPTGSMVSNVAPWMINVGVSTIDRLFTTYVVLGDKRRL 60
           +AI +FHAV+  I V+CSAGN GP G  V+N APW++ V  +TIDR F + VVLG  + +
Sbjct: 295 IAIGAFHAVEQGILVICSAGNDGPDGGTVTNTAPWIMTVAANTIDRDFESDVVLGGNKVI 354

Query: 61  K 62
           K
Sbjct: 355 K 355

[Close]

BLAST of CmaCh16G009860 vs. ExPASy Swiss-Prot
Match: Q9SZY3 (Subtilisin-like protease SBT3.8 OS=Arabidopsis thaliana OX=3702 GN=SBT3.8 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 8.2e-10
Identity = 29/58 (50.00%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 1   MAIMSFHAVKNDITVVCSAGNSGPTGSMVSNVAPWMINVGVSTIDRLFTTYVVLGDKR 59
           +A  +FHAV   ITVVCS GNSGP    V N APW++ V  +T+DR F T + LG+ +
Sbjct: 310 IATGAFHAVLKGITVVCSGGNSGPAAQTVGNTAPWILTVAATTLDRSFPTPITLGNNK 367

[Close]

BLAST of CmaCh16G009860 vs. TAIR 10
Match: AT2G04160.1 (Subtilisin-like serine endopeptidase family protein )

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-14
Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 1   MAIMSFHAVKNDITVVCSAGNSGPTGSMVSNVAPWMINVGVSTIDRLFTTYVVLGDKRRL 60
           +AI SFHA K  I VVCSAGNSGP  S VSNVAPW I VG ST+DR F + +VLG+ +  
Sbjct: 309 VAIGSFHAAKKRIVVVCSAGNSGPADSTVSNVAPWQITVGASTMDREFASNLVLGNGKHY 368

Query: 61  K 62
           K
Sbjct: 369 K 369

[Close]

BLAST of CmaCh16G009860 vs. TAIR 10
Match: AT5G59810.1 (Subtilase family protein )

HSP 1 Score: 75.1 bits (183), Expect = 2.5e-14
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 1   MAIMSFHAVKNDITVVCSAGNSGPTGSMVSNVAPWMINVGVSTIDRLFTTYVVLGDKRRL 60
           +AI SFHAVKN +TVVCSAGNSGP    VSNVAPW+I VG S++DR F  +V L + +  
Sbjct: 316 IAIGSFHAVKNGVTVVCSAGNSGPKSGTVSNVAPWVITVGASSMDREFQAFVELKNGQSF 375

Query: 61  K 62
           K
Sbjct: 376 K 376

[Close]

BLAST of CmaCh16G009860 vs. TAIR 10
Match: AT1G20150.1 (Subtilisin-like serine endopeptidase family protein )

HSP 1 Score: 70.1 bits (170), Expect = 8.2e-13
Identity = 36/61 (59.02%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 1   MAIMSFHAVKNDITVVCSAGNSGPTGSMVSNVAPWMINVGVSTIDRLFTTYVVL-GDKRR 60
           ++I SFHAV+  ITVVCS GNSGP+   V N APWMI V  STIDR F + ++L GD+ R
Sbjct: 297 LSIGSFHAVERGITVVCSVGNSGPSSQSVFNAAPWMITVAASTIDRGFESNILLGGDENR 356

[Close]

BLAST of CmaCh16G009860 vs. TAIR 10
Match: AT1G20160.1 (Subtilisin-like serine endopeptidase family protein )

HSP 1 Score: 67.4 bits (163), Expect = 5.3e-12
Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 1   MAIMSFHAVKNDITVVCSAGNSGPTGSMVSNVAPWMINVGVSTIDRLFTTYVVLGDKRRL 60
           +AI +FHAV+  I V+CSAGN GP G  V+N APW++ V  +TIDR F + VVLG  + +
Sbjct: 295 IAIGAFHAVEQGILVICSAGNDGPDGGTVTNTAPWIMTVAANTIDRDFESDVVLGGNKVI 354

Query: 61  K 62
           K
Sbjct: 355 K 355

[Close]

BLAST of CmaCh16G009860 vs. TAIR 10
Match: AT1G20160.2 (Subtilisin-like serine endopeptidase family protein )

HSP 1 Score: 67.4 bits (163), Expect = 5.3e-12
Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 1   MAIMSFHAVKNDITVVCSAGNSGPTGSMVSNVAPWMINVGVSTIDRLFTTYVVLGDKRRL 60
           +AI +FHAV+  I V+CSAGN GP G  V+N APW++ V  +TIDR F + VVLG  + +
Sbjct: 256 IAIGAFHAVEQGILVICSAGNDGPDGGTVTNTAPWIMTVAANTIDRDFESDVVLGGNKVI 315

Query: 61  K 62
           K
Sbjct: 316 K 316

The following BLAST results are available for this feature:

BLAST of CmaCh16G009860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZSP5	2.7e-13	62.30	Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana OX=3702 GN=AIR3 PE=2 SV=...	[more]
F4JXC5	3.6e-13	60.66	Subtilisin-like protease SBT5.4 OS=Arabidopsis thaliana OX=3702 GN=SBT5.4 PE=1 S...	[more]
F4HSQ2	1.2e-11	59.02	Subtilisin-like protease SBT5.1 OS=Arabidopsis thaliana OX=3702 GN=SBT5.1 PE=3 S...	[more]
Q9LNU1	7.5e-11	52.46	CO(2)-response secreted protease OS=Arabidopsis thaliana OX=3702 GN=CRSP PE=2 SV...	[more]
Q9SZY3	8.2e-10	50.00	Subtilisin-like protease SBT3.8 OS=Arabidopsis thaliana OX=3702 GN=SBT3.8 PE=3 S...	[more]

BLAST of CmaCh16G009860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04160.1	1.9e-14	62.30	Subtilisin-like serine endopeptidase family protein	[more]
AT5G59810.1	2.5e-14	60.66	Subtilase family protein	[more]
AT1G20150.1	8.2e-13	59.02	Subtilisin-like serine endopeptidase family protein	[more]
AT1G20160.1	5.3e-12	52.46	Subtilisin-like serine endopeptidase family protein	[more]
AT1G20160.2	5.3e-12	52.46	Subtilisin-like serine endopeptidase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.50.30.30		coord: 45..61 e-value: 2.2E-18 score: 68.3
None	No IPR available	PANTHER	PTHR43806:SF34	SUBTILISIN-LIKE PROTEASE SBT5.4	coord: 1..64
None	No IPR available	PANTHER	PTHR43806	PEPTIDASE S8	coord: 1..64
IPR036852	Peptidase S8/S53 domain superfamily	GENE3D	3.40.50.200	Peptidase S8/S53 domain	coord: 2..44 e-value: 2.2E-18 score: 68.3
IPR036852	Peptidase S8/S53 domain superfamily	SUPERFAMILY	52743	Subtilisin-like	coord: 2..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G009860.1	CmaCh16G009860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0009610	response to symbiotic fungus
molecular_function	GO:0004252	serine-type endopeptidase activity