CmaCh16G009780 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G009780
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Gamma-tubulin complex component
Location	Cma_Chr16: 7529253 .. 7541552 (-)
RNA-Seq Expression	CmaCh16G009780
Synteny	CmaCh16G009780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCAAATCACACACACCCAAAGAGCTCGTTCCTTCTTTCCCTCTCTGTTTCACTCTGATCATCCGATGTTGGAGCTGTACCATTGAGAATTTGAAACTTGCGTCTTTCGGGTGAAGGGAGGGCCTTCGTTGCTAACTTTTTTGAAATGGGTTCTTGGAATGTTCATTGGAAAACGCCATTTTAAGTCACTTCAGGAGCCACCATCGGCCTGCATCCTTCTCAGAATTCACTGGATTGCAGTTGAGAAACTATGGAAAATCCAGCATCAACACCCCGTTGGAACCTCGAGAGGCCCTTTCTCACTGGGCGTTTCCACCAGGTTTCTATTTCTCCTCCCTTGTTTTTTATTCACGTTTATTATCTTCCGAATCGAACAGAAATGTATTTTTCTAAAGATCAATAGCGTCTATGCTATAGCATTACGTTATCTTCCGAGTTATAGAGGCTTAAATGGAACTTCTGCGATCGAATTACTATCAATTTCCACTTCTGGCATCATTTTAATTGTTCCTGAATTCCCTGTTCTGTAATGAGTTATGGTCATTGTAGTTTTAATTCTTCGTTTGGTCTGTTTTACAGAAATTGAGTTCTCATTTTGCGGTTTTCTCTTTTTGTTTCGAAAATTATACCCCAGGAAGCAAAAACTACTTCTCTTTTTTCTGAATTAAAGTTGGATTCCTTCAGGTAAGAACAATCTTAATAATTGCATTTTTAGCTTATCTAGTTACTCCTTGAGTCCGAGTATCATTCCTACATGAAACAATACTTATGGTACACTTTAAAATTCGAATGTCTCAGCAATGGGGGGCTGGAAAAGGCCATAGGCTGTTATGATACTGCAATTCAGGTATGATATAGTTCGTCAATTTGTTGTTCCTGAATTACTTGTTCTCTTACAAATTTGGTCGCCACGCTTCTATATGTAGGAACTTATTGTAATTGATGATCTCCTCTCTGCCCTGCTTGGAATTGAGGGACGCTATATTTCAATTAAAAGAGTTCATGGAAAAGAGAATGAAATTTCTTTCCAGGTTGATGCATCTATGGATTTGACTCTTCAGGTAGAAATTTTGGAGGCCTGAAGTTACTACAACTGTTGATTAATATGTTAATGAATAAAAATTTGATCTCGAGTCTCTAACTATCTTGCTAATTTTCTCCGAGTGATAATTAACTTATTTTTAGCTGGTGCAGAGTAAGAAAAAGAAAAAGTTGAATGAGACATCAATCAATTGTGTATAGTGGATTACGAACATTTTATCTGATTATGATGTTTGCACTAAACTCTTCTTGTGCTAATTAAGGCTACTATTGCAGGAATTGGCAAAAAGAATATTTCCTCTGTGTGAGAGCTTTCTGTTCATTAATCAGTTTGTTGAATCAAGATCTCAGTTCAAAAAGGGCTTGGTTAATCATGCCTTTGCTGCGGCGCTTAGAGCTCTCCTTCTGGTAAGTGCTTTGTTTTTGTTTTTATTTTTTAGCCCTGATGTAGAAATTGTATTCATCTGAGTAAAATTGGACAAATGTCTTTGTATTCTTTCCATTCTGTCAGCAAATCCTTACAATGAAAAAAACATAACAATCCATACAAAGTAATGGGAAATAATTTGTGGAAACAATACATTAGAATCACACAATTCCTTCCTTTTTCTATTTCTTGTTTTCTGTTTTTTTTTTTTTTTTTTTTGGATGAAAAAAACGACTAGCATTAAGAGGGACTGAGAGAATATACAAGAGCAATACAAAAAAGGAAAGCCTAGTCCAAAGGAGTCAGAAGGACTACCAAAAGCAGAAAAGCAGAAGAGAATTAGAAAAAGGGCTCCAATTTACAAGATAGGTAACATGTGTAGTGTTAAACCCTTGCCATCCCTCACTTCTATCACACTCCAATCTTTCAAAGACGGGATTAAGTATGATGTACTCAACCCTACCTCAGGTGGCTTAAGCAGCCCTTGTAAGAATAAGCATCTCCTAAACACACACGGTACTACCTAGTACACACACACAAATAATCACTCAAGGAGAAGAAGAATGGACTAACCTTGGTGGTCCATGTTTGATGACCAATCAAGGTTGAATGTTTTCTAAGGAACGTGCAACCTAAGCTAGGATGCAACGTGTTCTCGGTTTGGAGAAAAGAGAGGAACCCTTTCTGTTTTCATTTCACCATAATGTCCAACTCCTCAAATTTACAAATGAAGGCTTAACCTCATATGATTGGTCATCTAAAGAAACTAATAGCAACTCAACAAAACCCTAAGCTACTCTAATTAAAATAGAGTTTAGTTACGAGTTGAAACCTTCTCAAATGGGCTAATTAACACTTGGCTCCACTCCTAAGCCTAATAACTATTAAATACATTTACACATGAAGTAGAAAAGAAGATTGCATGAGAACTACGTGGAAAACACTACTTCAGGGTTTTAAACCCTCAGTGGCGCTAATTATCCTTAAATGAAGCTTTTGGGTTGGTGTCTTCATGTTGTCTTAATGTTATTTTCTTCAACTTTCCTTCTCATGAAGCTTGATACTTTGAATTTTGGAATGGAAATCTCCTTGTTTTGCTTAGCCTCATGATATGATGTGCTTTGCTAGTTGCATATGAAAGTGCTTTTGGTGGAGCCAACCATTTTCAAACTTAAAGGTGACAGGACCTTATAGAAAGACATCCTTCACTAAGAGAGTAGGAAAACGATTTAGGGTTGTGAAATTCCACATTGGTTGGAGAGAGGAACGAAGCATTGCTTATAAGAGTGTGGAAACCTCTCTCTAGTGGACGCATTTTAAAGCCTGGAGGGGAAGCTTGGAAGGGAAAGCCTAAAGAGAACAATATTTGCTGGTGGGTAGGCTTGGGCTGTTCAAATGGTATCAAAGCCAGTCACTGGACGGTGCGAAGCGCTAGTCAGAGTAAGACTAGACCCCCTCTCCATAGCAGACACGTTTTAAAACCTTGAAAGGAAACTCGGAAGGGAAGCCCAAAGAGGATAATATCTACTAGCGGTGGGCTTGGACTGCTTCAAGGGTTCTTTCTTATAACGTTCTTGGAGACCCTTCATTCCTGGAATCTAGAGGAAGACTTAATATTGGAGCTAACAGCTTTTAACTTGTTAGACACCCGTTAATAAGGCGTGTGTGAAAAAGGAGGAAGAAACATAGGGACTGAAAATAGGGTGTAGTTCCTAAGTAGTTATTTACTTATGCTTCTTGTTTGGAACTCTTGTCTTGTCTATCTTTGTTAGTTGTTCTCAATCATAGTTTATATTGCAAAGATTAGTATCAGAACTTAAAAGGAGCTATGACCCAGGGAAGGCACCCTTGACTAAGAGAATAGGAGGATGATCTAAGGTGCTTCCAACTTTCCTGAAAACCTGGAGTTCTGAATGAAGAAATCCATCTTTATGAAACCAAAAGTCTATTGGTGAGTGTTTTAATAGGTTATCTACAGCCAGATTAGGTCTAGAGGTCAATAGACAAGGGGATTTCTATCACAACAGGTCATTTATGCGTTTATTAACGTTCTTCTGGTAAAATGGCCCCCATTAGACTTTTCAGAGGGCCATCTACATGACATTGAAGTCTCCCTATAGACTCCATCAATCTAAGCACAACCCCAGCACGATCCAGAAATCAGTCCTGTTAAGATTCAGGTCAATATGTTACTTGTAGTCCACCCTACTGAATCATCAAACGAAGGCAGGTTAAGAGAATTTTTTTATGCATGCACCATGCACTACCTCGGTAATACATCACAACAATCCTCTCTACACACCATAGTCTTTAGTGTAGGTCTAGCCAATGCTTCCAGCTTGAACCCATCAGACTTAGTAAGCCCCCTTAACTGCCTCTTTCCGTTTTGATTACTAGAGGAAGACGATATCTGGATTTAAGGTTCTAACTTCTAAGAAAGTTTTTAAATCAGATGCTGGATAAATGGTTCACTTTTAAATTTATAAGTTTCTCTAACACATTCTCTTTATGGTAATTGTAAAAAAATTGCATATGTTTCTTCTAAACCACAGTTTTTGACTAGGTTAGGCATTGTTATGGTGAAGATTTTGCTGACTTGCTAATTGAATGATCAACAAGGAATTGCGTGTAATACAAGTGTCTCTCTTGTATCCTCATTAAGTCATTCCTGTGTATGTTCCTGTATGATAATGTCTGAGCTCTTGAGGATCAAATTGGATTTTACGAACAAATGTGTACTCTTATTCCATAAAAAAAAAAATTACAGTGTATGATTACGAAAAAGGGACCTAATTTTGTCTTATGATTAACATGTTTGTCAACAAGAAACAGACTTATCGTTTGAAAAGTTACAAGTAACAGTAACAGCTTATAACAACAGAATTATTGCTCAAGGGAGGAGATCCAATACACCTCGGAGTAGATTGAACACTGTCCTATAGGATTATGTTTAGAATCTGATAATAATGTGTTAGGTTTAGAGTTTCAAACTATGTTGAATTGAACACTGCATGTTCTAATTTAGTTCTGCTGTTATTCCTTAGGATTATCAAGCAATGGTAGCCCAGCTTGAGCACCAGTTTCGACTTGGTAGACTTTCCACCCAAGGATTGTGGTTTTACTGTCAGGTTTGAGCTTATCTTAATTTCTTCAAATTCATTTCAAGCATACCATCTCACGTTTTATGCTATGACACATTGCAGCCTGTGATGGGTTCCATGCAAGCATTATCTGCTGTGACACGAAAGGTCTCGGCTAGTGATATTGCAGGTTCTGCGGTTCTTAACCTCTTGCAGAGCCAGGTACAAACTTGTACTTATAGTGAATGTATTTTGTAATCATCAGAATTTCTCAACAAGTTTTGTATCTTTAAGGGACTTGCCTTGTTTCTAGTAAAACCCTTGGACATTGATATTTGAGCTACTGTATTATGCGATTAGATGTAGGTTGTTGGCACTTGCTCTTTTACTGCCTCTCCTTTTAGTTTTCCTTTTCCTTTTCCTTTTCCCCCATTTTTCTTTCTTGAAGACATGTTTTATAATGAAAAAGGATTTTAAAGGGGAATACATGATCAGAATTCAAAACTGTTGTTTTATGCTTCAATATATACTATGTTAAATTTATTTTTTTCTGTATATAGAGTGTGATTATATGTGTAAGATTCTTTTCTTTTTATCCGTCTTTCTTCTACTCAAGATAGGCCCTTGTAATCGTTGTGAATGAAAAAGAATTATTCTATTTAATTCCTACTCTATCTTGATATTTAGCGTGTTTCAGACGAAAATAAAATCCTAAAAGTACCTCTAACCTAATTCTAACCCAAGCTACCATCACCCTTCTGCCGTCGCTGCTGTTCATCACCCTGGTTATACTGTCAGTCATCCAAGTCAGAGCAAGATGTTTCTTGATCCCAACCACACTTACCCTGATGAATCAGAGAAGGTAGGAAAGAAAGAAAGGCCATTGAGAGTAAGAAGATCCTCAGGCTATTCTCGATACAATGCCCATTAATCAGTTCCCAGTCCCAGACCAAACAAACAAAACCTATCAAAAATGGAGCCTAGTTTAAGCTGTCAAACAAATAAATGAGAGAATGGAAAATGATGAATATTTAAAACCACTTGTCTAGGGCGGCCTTGAGAATTGGGGGGCCAACGAGGCTGGGGACAGTTGGTAAGGGATAATGAGTGGTTGTGGTACAGGCAGGGTGAGGGGTTGAGTCGGGATTTGAATCAAAACTCTATAAAACGTCGAGAATCTAAGAGTTTTCCCTACCTAGGCGACCGTATAAAGAAGAGGTGGAAAAAAGTTACATAACATAGTTTATTTATTATTTTTTCTTTTTTCTTTTTTTATTTTGTCTTTCTAATTATTTAGAATCTATTTAATAGATTTATATGTTAAATTAATTATTGTTTATAATAAGAATATTAGTTTTTACAACTCTTGCGTTGTCCAATGAATCCGTTTATTCCGAATCGCGGGATAGAGAGACAGATGACGACGGCAAGAGTGGCTTTTTCAGCCATCTCATTCATGGACAGAAGTTTTGGGTAAAATCAAATGCACCTGGACGACGAAGAGCTTGGAATACAATCTAGAGGATCTGGTAGAAGAATGTATGGGTTTGTTAGGAATAGATAGTTGTTGTCTGGACATACGAGTCACAGCCGGCCGGGAACCGGGAAGAGGAGAGATTGTTCTGCTTCGTTCCTAACCATTCAACCTGCTCCATGGTCCGCAAATCCAATCCAACCACTAGTTAGAAAAGATGTTTTTCTTCTATTGCAGCTTGCGAGGAGTCACATTCATGAGAACATGAGCTTTTTCTAGTTCAAATAATCAATTTTGATAACCCAAGCCATAATCTTGAAGCTTTACCATCAATATAACAGAATCAATAGTTTGTTTAACATTTATTAGAGCTAACTGGAATTTGAAAACTCTAGGACATTTTCTTATTCCATTTGCTGAAACTTAATCCAGATTTTTATTTATGATCTTGACCTAGTGAATGACAATTCACTCATATTGGAAGCCTTGGATTTTTTAGGAATTAGACAAATGAGGTGTCTTCTTGAGACATGCGTTGGAACATTCAGGAAATAGAGTCTTAGAACATCATGAGTATATCGTCTTTAATGATGCTAAGTCTTTACTTTTATTGTTTAGGCCAAGGCTATGGCTGGTGATAATGCAGTGAGGTCTTTGCTGGAAAAGATGACACAGTGTGCAAGCAATGCTTACCTTGGTATATTAGAAAGGTTGGTTCTGGCAACTGCTACAAATTTTTGTGCTATTCGAAGAATTGAGCTAATTGTTTTTAATAATAGTTCGCCAAATTTCTTCCCTTCTCGCCAACAAACACTGTCATGCCCAATCCCAAAAAAGGGAAGAGAAAGAATCCATTTAGTTACTTTATCAAGTATCTATTAATGAACTTGGACTTAACTTTTTCTTGTTGATGGTTTTATATGACTTATGGGACTAAAATAATTAAACAACTTACTCGAGAATTTTTAAGGTGGAGACATCTTGATGAGGTTTAGTATGCATTTTGTATAGATTGAGAAAAAAGTTGGGATGTTTCATAAATTACTGCGTAGTATGCATCCAACAAGGCGCCAACCTATTAGCATCCAAAGTTGAAAGTTCTCCTGCTATTTTTATGACATTGCTTTCTGAAGGGGTAGGGGAAAATATCAGTTGCTTTTTTATTAAGAACTTTTGCCCAAGGTCCTTGCTGAATCTCATTAGAACTTACCATCCTTAATTCTCCAATTTCTATCGCAACATGGTTGCTTATTCCCACAAATTATTATGAACCGCAATCCACTTACCCAACACGTAAGAGTTCGAGAATTCACTTTTTCTGAAAATTTGTTGTCAAAATGGCCAATTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNCCCCCCCCCAGTTTTGTGACCATGTTTTTCCATTTTGTTATTAATTGATCAGATTGCTAAGTATGCATAAATTTTAATTCAGATGGGTTTATGAGGGAGTAATCGATGATCCTTATGGTGAATTTTTCATTGTGGAAAACAAATCTCTAAGGAAGGTATGGAGCTTTCTATCATATTTTAGTGTATTTGGAATTGTGGTTCTCATGGGTATGAAGTATGTTTTTCTAGGAGAGCCTCTATCAAGATTATGATACAAAGTACTGGAGGTGTCGCTATAGTCTCAAGGAGGGAATTCCTACATTTCTTGCAAATATAGCAGGAATGATATTGACGACAGGAAAATATCTAAATGTCATGAGAGAGTGTGGCCATAATGTTCAGGTTTATTTATAACGTTTCTTAAAAAAAAAATTATGATTGCAATTATTATATTATTTGGGTACTTTATAAAGTAATAAAAATATATTTATTTTAATATCTGATTTTGTTGCCTTTTCAGCTACCTGTTTCAGAAAATTCAAAGTTAATGAGTTTTGGCTCAAATCATCAATATTTGGAGTGTATAAAAGCTGCTTATGATTTTTCCAGCAGTGAACTATTGAAACTTATTAAAGAAAAGGTAGCATTCTATGAATCCCCTCTTTGCTGGTTCTTTTCCTTATTTTCATCCATATTTTCTTTAAATATTTTTCTAGCTTTCATCCATGCCAATTTCTTTACAATAGTGGAAAAATTTGGTATTTCCCTGTAGTATGACCTGGTGGTGAAGCTGAGGTCAATTAAGCATTACCTTCTGCTTGATCAGGTATATGATCTTTGATTTGTAAACTTACGCTGTACTCTACGAACCTAGGAACTGATATGTGCTTTAGATTTCATTCCATTTTGGTTATTTTATTCCTTATAGATAGTAGTATTGAATGCTTTGAAGTATTGTATGCTTATAAATCCATAAGAAATATCCTTCTCTAGTTTAATGAATTTCATTAGTGAACAAATTGAAGCAGTAGATTCAATTTTCCTGTTGGTCTGTCTTCCTGAAGAACTAGCATAATGTAGCATGAATCAAGTCAAGGAATTCAATTCTTTCCTTTTTGGATAGGTGGACTCATTATTGAAAAAGGCAAAATTTTCTCATGAAGGCTAATCACAGGGTTCTCCTGATTAACCTGTATCTAAGCTTTCCCATATGTGGTTTTTTCTTATTTATGTTTTGTTAGAAACTCATATTACATGATTGCAGGGTGATTTCTTGGTTCATTTTATGGACATTGCTCGAGATGAACTTTCAAAAAAGCTTGATGATATTTCTGTAGAAAAGTTGCAGGTTTGATCCTAACCTCTCGAGCTAACTTTTACCGATTATTACCTAATGAAAAATGTTTGTGTATCAATATCAAATGATATGCCTTCATGGCTATCTAGTCTCTGCTGGATGTTGCCTTACGCTCCACAGCAGCTGCAGCAGATCCTTGTCATGAGGACTTAACGTGTTGTGTGGTAAGCTGATTGCAGTTTATTCTTTGTATGATGCAGAAAATACCAAAAAGCTGCATGTTTCCTTCATTTCTAAACATATTTTCAGGAAAGAATGTCGTTGCCTAAAAGCTTGCGTGCACTTAAGGATCTAGTTGACAGTAGGACTCTTCCAGGCATCAATGATGAGGAAGAACCCATGGGCATTACTGGCCTTGAGACATTTTCTTTGAGTTATAAGGTAATTTTATCAATTCATGTTTTTCCTTCAGTGTTGCTTCAAGCCTAATTTCCTTAGCAAGAAGTACGAGTTGTATTTTTAAACCAAATTAGCTACTATTTCATTTCTGAAATAATAATATTGGTCAGCGTTTTGGATGGTTCAAACATTCGCCTGGGCATCCCAGCCTGCTAATATTTATCCTAGGCATAGTTCACGTTATCAAGCCTGAAGGCCTGTGGCCTTATCCAAGGGCCAGTCCCTTTGGATAATATCTGGATTGAAGTTTCCGATCAGCTTTCTTTATCAAACTAGGTTGAGCATTAGTTTGCTAAAGACAATTTAAAGAAAGCAATGTTATAAAATAAAAGCGAGTAGGCACCAACGGCTTTGATAGCATATAACTTGGGTAAGAAGAATTGATAACTAGTTACATCCCCCTATAGTACACTTTGGGGCATTTTAGCCCTGGCGGGTGTAGACATGATTTTAGTGATCGGTCATATATCGTATTGACACAATAATAATAGTAAAGGTTTATCTAACATAGAAGCAAGAAAAAGGGGTTTAGAATGGACATGCGGCCATGGACAACACATCTTGAACAAGCATGATCGGTACATCCGACATGCGGCCATAGGCAACACGCCTTGGACAAGCATGACCTTGACATAGCGCATACAAAATTATAATATATAAAAGGTATTGTATGATTAGAAATATGCAACTAGATTTTTTATTCTGAACCACTAGGCATTCGTAAACTAATATTTGGCATGAACTAGTATCGATTTTTTTTATTTTCATTTTATCTATATTTTTTGTTTGTGTTTATTTTGACTATTTAATGGGGGCTAAATTTCAGGTCAGATGGCCCTTGTCTATAGTTATATCATGGAAATCTCTATCAAAGTACCAGCTGATTTTCCGCTTTCTTTTCCACTGCAAGCATGTGGAGCGCCAGCTTTGTTGGGCATGGCAAGTACATCAAGTAGGGCTTGGTTTTCTCTTTTCCTGGTTAGATTCTCATTTAGCTTATACATTTTTCACACATAAATAATGGTCTTTGGCAGGGTGTTCTGTTCGTTCCCTTAATATCAGTGGTACATCCATCTCAAGATCATCGTTACTCTGTCGTTCAATGCTTAAATTTATTAATAGCCTTCTACACTATTTGACATTTGAGGTAAGTTTTATCTTTCATTAAATATTTTTCATTGTTCAAAAACAATGCTCGCTTTGAGTACCTAAGTGCTGGTTTTTCTTTGAATTTGTAGTTACTTTCTTCTCCCTCCTACTTAAGCATGCTGCTGAGATAAAATCCTATTCTATATGTTTGTAGCCATTATGTTTTTCCCTGACCGTAACCTTAGTTCCCATAACCTATCATCACGAGTTTTTTGGTTTTAGGTTCTTGAACCCAATTGGCATGTAATGCACAACCGGATTCAGACTGCAAAGAGCATTGATGAGGTACATTCCCTTCTGTTGCTTATATTGGAGGGATAAGTCTTTTATCATGTGTTACTGAAGTGGCTATTGTAAGTATATATTTGATAAGCTCCTTTGATCAGGTTATCCGGCATCATGATTTCTTCCTTGACAAATGTCTCCGAGAATGTTTGCTTTTGTTGCCACAGTTGCTTAAGGTCAGTTAATGAAATATGTTTTTCCCTTCAATGTAAGTAGATTGGTGATAACTACGTGATCACTCTTTTAAAAATCGTAGATATGAACACCCCTGGGTCTTGTTGATATGCAGCAAGTGACTTCATTCACATCCTCCCCTTTGTACTTAAGTTTATCATGATCTTGGAGAAATCTGTTAGGGATTTTCATTTGAAAAAGGTAGCCTCCTTGTGAATTGTAAGTTCTCCTCCCTTTCCGTCTTGTTCGGAGGGCTATACATTGGCTCCCTTAGAGCGAAAAACTCCCTCCAGTAATGGTTGTTGAGGTTGTTTCTGTTAAAAACCACGAACCTCCACGATGGTAGGATGTTGTCCACATCGAGTATAAGCTCTCGTGGCTTTGCTTTTGATTTCTCCAAATGGCCTCGTACTAATGAAGATAATATTATTTACTTATAAACCTATGATCTTCCCCATAATTAGCCAACGTGGGACTCCCTCCCAACAATCCTCAACCGTTTCCAAACGGAGAGCATTTTATTAGCAGTAAATATGGGCCAAAGACTCCGGTTGTCTGTCTTTAAGTCCATGAACAAATAGAGGCAATTGTCTTTGGTCTTAAATTATAAATCACAAATTGTTTATTCTGTTCATTTGTTGTTGGGATCTTCTTCTTCTAATATTTTCTGTGTGTGCAGAAAGTGGAGAGGTTGAAATTACTATGCCTGCAGTATGCAGCAGCTACACAGTGCTTGATTTCATCCTCCATTGATGTCTGCAAGTCAGAGGAATCGTCCAATAGCTTGACCCGTTCCGAAACATCCAAGCAATGGAATGGAAGAACTCCCAAGGGAGCGATACTAAGCGCCTCCAACTCGACAGTCACCGAGTCTATCCTGTAAGTTCGTAACGAGCAGCTAGTTACAGTTATAACTCGACTCAAAATTTCTTGTACTCACATTTGTGTTGCACATGTTGCAGTAAATTTGAGAAGGAATTCAACTCTGAGCTTCAGAGTTTGGGACCACTTCTGAGTAAAAGCTCCCAGGCTGAGCCATATTTAACTCACCTTGCTCAGTGGATTCTTGGCATGGAAATAACAAATAGGTTCTAAATTTCTTCCCTAACTGCAACTTTACAGAATTGATTTCATAGAGGTCTAGAAAGCATAATGTTTTGATTGCTACCGTTCGCTCGGTATGTCTTACACTTTCTAGGAGTCGGGTTTTTTTACATGTCGATGTGCTTTATTTTTACTTGTGAGTTGTTAGAAAGTTAACAAAATTCTCCCCTACCCACGTAATCTTCCCTCTAGAACGGTACTCTCGTGTTCCTCCCTTTTGGTGATCTTTATTAAGACGGTGAAGACTTTTCTTCTGATGTTGACAAATTCTTCTTAGATGCTCTTTCAACCGAAAACAATGCAGTCGAACCTTAAAATCATTGATTTCGAGATTTTTTTTCAATGATTACTACT

mRNA sequence

TGCAAATCACACACACCCAAAGAGCTCGTTCCTTCTTTCCCTCTCTGTTTCACTCTGATCATCCGATGTTGGAGCTGTACCATTGAGAATTTGAAACTTGCGTCTTTCGGGTGAAGGGAGGGCCTTCGTTGCTAACTTTTTTGAAATGGGTTCTTGGAATGTTCATTGGAAAACGCCATTTTAAGTCACTTCAGGAGCCACCATCGGCCTGCATCCTTCTCAGAATTCACTGGATTGCAGTTGAGAAACTATGGAAAATCCAGCATCAACACCCCGTTGGAACCTCGAGAGGCCCTTTCTCACTGGGCGTTTCCACCAGCAATGGGGGGCTGGAAAAGGCCATAGGCTGTTATGATACTGCAATTCAGGAACTTATTGTAATTGATGATCTCCTCTCTGCCCTGCTTGGAATTGAGGGACGCTATATTTCAATTAAAAGAGTTCATGGAAAAGAGAATGAAATTTCTTTCCAGGTTGATGCATCTATGGATTTGACTCTTCAGGAATTGGCAAAAAGAATATTTCCTCTGTGTGAGAGCTTTCTGTTCATTAATCAGTTTGTTGAATCAAGATCTCAGTTCAAAAAGGGCTTGGTTAATCATGCCTTTGCTGCGGCGCTTAGAGCTCTCCTTCTGGATTATCAAGCAATGGTAGCCCAGCTTGAGCACCAGTTTCGACTTGGTAGACTTTCCACCCAAGGATTGTGGTTTTACTGTCAGCCTGTGATGGGTTCCATGCAAGCATTATCTGCTGTGACACGAAAGGTCTCGGCTAGTGATATTGCAGGTTCTGCGGTTCTTAACCTCTTGCAGAGCCAGGCCAAGGCTATGGCTGGTGATAATGCAGTGAGGTCTTTGCTGGAAAAGATGACACAGTGTGCAAGCAATGCTTACCTTGGTATATTAGAAAGATGGGTTTATGAGGGAGTAATCGATGATCCTTATGGTGAATTTTTCATTGTGGAAAACAAATCTCTAAGGAAGGAGAGCCTCTATCAAGATTATGATACAAAGTACTGGAGGTGTCGCTATAGTCTCAAGGAGGGAATTCCTACATTTCTTGCAAATATAGCAGGAATGATATTGACGACAGGAAAATATCTAAATGTCATGAGAGAGTGTGGCCATAATGTTCAGCTACCTGTTTCAGAAAATTCAAAGTTAATGAGTTTTGGCTCAAATCATCAATATTTGGAGTGTATAAAAGCTGCTTATGATTTTTCCAGCAGTGAACTATTGAAACTTATTAAAGAAAAGTATGACCTGGTGGTGAAGCTGAGGTCAATTAAGCATTACCTTCTGCTTGATCAGGGTGATTTCTTGGTTCATTTTATGGACATTGCTCGAGATGAACTTTCAAAAAAGCTTGATGATATTTCTGTAGAAAAGTTGCAGTCTCTGCTGGATGTTGCCTTACGCTCCACAGCAGCTGCAGCAGATCCTTGTCATGAGGACTTAACGTGTTGTGTGGAAAGAATGTCGTTGCCTAAAAGCTTGCGTGCACTTAAGGATCTAGTTGACAGTAGGACTCTTCCAGGCATCAATGATGAGGAAGAACCCATGGGCATTACTGGCCTTGAGACATTTTCTTTGAGTTATAAGGTCAGATGGCCCTTGTCTATAGTTATATCATGGAAATCTCTATCAAAGTACCAGCTGATTTTCCGCTTTCTTTTCCACTGCAAGCATGTGGAGCGCCAGCTTTGTTGGGCATGGCAAGTTCTTGAACCCAATTGGCATGTAATGCACAACCGGATTCAGACTGCAAAGAGCATTGATGAGGTTATCCGGCATCATGATTTCTTCCTTGACAAATGTCTCCGAGAATGTTTGCTTTTGTTGCCACAGTTGCTTAAGAAAGTGGAGAGGTTGAAATTACTATGCCTGCAGTATGCAGCAGCTACACAGTGCTTGATTTCATCCTCCATTGATGTCTGCAAGTCAGAGGAATCGTCCAATAGCTTGACCCGTTCCGAAACATCCAAGCAATGGAATGGAAGAACTCCCAAGGGAGCGATACTAAGCGCCTCCAACTCGACAGTCACCGAGTCTATCCTTAAATTTGAGAAGGAATTCAACTCTGAGCTTCAGAGTTTGGGACCACTTCTGAGTAAAAGCTCCCAGGCTGAGCCATATTTAACTCACCTTGCTCAGTGGATTCTTGGCATGGAAATAACAAATAGGTTCTAAATTTCTTCCCTAACTGCAACTTTACAGAATTGATTTCATAGAGGTCTAGAAAGCATAATGTTTTGATTGCTACCGTTCGCTCGGTATGTCTTACACTTTCTAGGAGTCGGGTTTTTTTACATGTCGATGTGCTTTATTTTTACTTGTGAGTTGTTAGAAAGTTAACAAAATTCTCCCCTACCCACGTAATCTTCCCTCTAGAACGGTACTCTCGTGTTCCTCCCTTTTGGTGATCTTTATTAAGACGGTGAAGACTTTTCTTCTGATGTTGACAAATTCTTCTTAGATGCTCTTTCAACCGAAAACAATGCAGTCGAACCTTAAAATCATTGATTTCGAGATTTTTTTTCAATGATTACTACT

Coding sequence (CDS)

ATGTTCATTGGAAAACGCCATTTTAAGTCACTTCAGGAGCCACCATCGGCCTGCATCCTTCTCAGAATTCACTGGATTGCAGTTGAGAAACTATGGAAAATCCAGCATCAACACCCCGTTGGAACCTCGAGAGGCCCTTTCTCACTGGGCGTTTCCACCAGCAATGGGGGGCTGGAAAAGGCCATAGGCTGTTATGATACTGCAATTCAGGAACTTATTGTAATTGATGATCTCCTCTCTGCCCTGCTTGGAATTGAGGGACGCTATATTTCAATTAAAAGAGTTCATGGAAAAGAGAATGAAATTTCTTTCCAGGTTGATGCATCTATGGATTTGACTCTTCAGGAATTGGCAAAAAGAATATTTCCTCTGTGTGAGAGCTTTCTGTTCATTAATCAGTTTGTTGAATCAAGATCTCAGTTCAAAAAGGGCTTGGTTAATCATGCCTTTGCTGCGGCGCTTAGAGCTCTCCTTCTGGATTATCAAGCAATGGTAGCCCAGCTTGAGCACCAGTTTCGACTTGGTAGACTTTCCACCCAAGGATTGTGGTTTTACTGTCAGCCTGTGATGGGTTCCATGCAAGCATTATCTGCTGTGACACGAAAGGTCTCGGCTAGTGATATTGCAGGTTCTGCGGTTCTTAACCTCTTGCAGAGCCAGGCCAAGGCTATGGCTGGTGATAATGCAGTGAGGTCTTTGCTGGAAAAGATGACACAGTGTGCAAGCAATGCTTACCTTGGTATATTAGAAAGATGGGTTTATGAGGGAGTAATCGATGATCCTTATGGTGAATTTTTCATTGTGGAAAACAAATCTCTAAGGAAGGAGAGCCTCTATCAAGATTATGATACAAAGTACTGGAGGTGTCGCTATAGTCTCAAGGAGGGAATTCCTACATTTCTTGCAAATATAGCAGGAATGATATTGACGACAGGAAAATATCTAAATGTCATGAGAGAGTGTGGCCATAATGTTCAGCTACCTGTTTCAGAAAATTCAAAGTTAATGAGTTTTGGCTCAAATCATCAATATTTGGAGTGTATAAAAGCTGCTTATGATTTTTCCAGCAGTGAACTATTGAAACTTATTAAAGAAAAGTATGACCTGGTGGTGAAGCTGAGGTCAATTAAGCATTACCTTCTGCTTGATCAGGGTGATTTCTTGGTTCATTTTATGGACATTGCTCGAGATGAACTTTCAAAAAAGCTTGATGATATTTCTGTAGAAAAGTTGCAGTCTCTGCTGGATGTTGCCTTACGCTCCACAGCAGCTGCAGCAGATCCTTGTCATGAGGACTTAACGTGTTGTGTGGAAAGAATGTCGTTGCCTAAAAGCTTGCGTGCACTTAAGGATCTAGTTGACAGTAGGACTCTTCCAGGCATCAATGATGAGGAAGAACCCATGGGCATTACTGGCCTTGAGACATTTTCTTTGAGTTATAAGGTCAGATGGCCCTTGTCTATAGTTATATCATGGAAATCTCTATCAAAGTACCAGCTGATTTTCCGCTTTCTTTTCCACTGCAAGCATGTGGAGCGCCAGCTTTGTTGGGCATGGCAAGTTCTTGAACCCAATTGGCATGTAATGCACAACCGGATTCAGACTGCAAAGAGCATTGATGAGGTTATCCGGCATCATGATTTCTTCCTTGACAAATGTCTCCGAGAATGTTTGCTTTTGTTGCCACAGTTGCTTAAGAAAGTGGAGAGGTTGAAATTACTATGCCTGCAGTATGCAGCAGCTACACAGTGCTTGATTTCATCCTCCATTGATGTCTGCAAGTCAGAGGAATCGTCCAATAGCTTGACCCGTTCCGAAACATCCAAGCAATGGAATGGAAGAACTCCCAAGGGAGCGATACTAAGCGCCTCCAACTCGACAGTCACCGAGTCTATCCTTAAATTTGAGAAGGAATTCAACTCTGAGCTTCAGAGTTTGGGACCACTTCTGAGTAAAAGCTCCCAGGCTGAGCCATATTTAACTCACCTTGCTCAGTGGATTCTTGGCATGGAAATAACAAATAGGTTCTAA

Protein sequence

MFIGKRHFKSLQEPPSACILLRIHWIAVEKLWKIQHQHPVGTSRGPFSLGVSTSNGGLEKAIGCYDTAIQELIVIDDLLSALLGIEGRYISIKRVHGKENEISFQVDASMDLTLQELAKRIFPLCESFLFINQFVESRSQFKKGLVNHAFAAALRALLLDYQAMVAQLEHQFRLGRLSTQGLWFYCQPVMGSMQALSAVTRKVSASDIAGSAVLNLLQSQAKAMAGDNAVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIVENKSLRKESLYQDYDTKYWRCRYSLKEGIPTFLANIAGMILTTGKYLNVMRECGHNVQLPVSENSKLMSFGSNHQYLECIKAAYDFSSSELLKLIKEKYDLVVKLRSIKHYLLLDQGDFLVHFMDIARDELSKKLDDISVEKLQSLLDVALRSTAAAADPCHEDLTCCVERMSLPKSLRALKDLVDSRTLPGINDEEEPMGITGLETFSLSYKVRWPLSIVISWKSLSKYQLIFRFLFHCKHVERQLCWAWQVLEPNWHVMHNRIQTAKSIDEVIRHHDFFLDKCLRECLLLLPQLLKKVERLKLLCLQYAAATQCLISSSIDVCKSEESSNSLTRSETSKQWNGRTPKGAILSASNSTVTESILKFEKEFNSELQSLGPLLSKSSQAEPYLTHLAQWILGMEITNRF

Homology

[Close]

BLAST of CmaCh16G009780 vs. ExPASy Swiss-Prot
Match: Q9C5H9 (Gamma-tubulin complex component 2 OS=Arabidopsis thaliana OX=3702 GN=GCP2 PE=1 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 5.2e-255
Identity = 463/659 (70.26%), Postives = 523/659 (79.36%), Query Frame = 0


Query: 51  VSTSNGGLEKAIGCYDTAIQELIVIDDLLSALLGIEGRYISIKRVHGKENEISFQVDASM 110
           + +S+ G+E+AIGCYDT +QELIVIDDLLSAL+GIEGRYISIKR HGKE+ I+FQVD SM
Sbjct: 44  LDSSSSGVEQAIGCYDTPVQELIVIDDLLSALVGIEGRYISIKRFHGKEDSIAFQVDPSM 103

Query: 111 DLTLQELAKRIFPLCESFLFINQFVESRSQFKKGLVNHAFAAALRALLLDYQAMVAQLEH 170
           DL LQELAKRIFPLCE +L I+QFVES SQFK GLVNHAFAAALRALLLDYQAMVAQLEH
Sbjct: 104 DLALQELAKRIFPLCEYYLLIDQFVESSSQFKNGLVNHAFAAALRALLLDYQAMVAQLEH 163

Query: 171 QFRLGRLSTQGLWFYCQPVMGSMQALSAVTRKVSASDIAGSAVLNLLQSQAKAMAGDNAV 230
           QFRLGRLS QGLWFYCQP+MGSM+AL+AV ++ S     GS VLNLLQSQAKAMAGDN+V
Sbjct: 164 QFRLGRLSIQGLWFYCQPMMGSMRALAAVIQQASTKQFVGSGVLNLLQSQAKAMAGDNSV 223

Query: 231 RSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIVENKSLRKESLYQDYDTKYWRCR 290
           RSLLEKMT+CASNAYL ILERWVYEG+IDDPYGEFFI EN+SL+KESL QD   KYW  R
Sbjct: 224 RSLLEKMTECASNAYLSILERWVYEGIIDDPYGEFFIAENRSLKKESLSQDSTAKYWSQR 283

Query: 291 YSLKEGIPTFLANIAGMILTTGKYLNVMRECGHNVQLPVSENSKLMSFGSNHQYLECIKA 350
           YSLK+ IP FLANIA  ILTTGKYLNVMRECGHNVQ+P+SE SKL  FGSNH YLECIKA
Sbjct: 284 YSLKDTIPGFLANIAATILTTGKYLNVMRECGHNVQVPISERSKLTIFGSNHHYLECIKA 343

Query: 351 AYDFSSSELLKLIKEKYDLVVKLRSIKHYLLLDQGDFLVHFMDIARDELSKKLDDISVEK 410
           A++F+S EL+ LIK+KYDLV +LRSIKHYLLLDQGDFLVHFMDIAR+EL+KK+ +ISVEK
Sbjct: 344 AHEFASIELVNLIKDKYDLVGRLRSIKHYLLLDQGDFLVHFMDIAREELNKKVHEISVEK 403

Query: 411 LQSLLDVALRSTAAAADPCHEDLTCCVERMSLPKSLRALKDLVDSRTLPGINDEEEPMGI 470
           LQSLLD+ALR+TAAAADP HEDLTCCV+R SL  +L   KD  DS      N  E+PM I
Sbjct: 404 LQSLLDLALRTTAAAADPRHEDLTCCVDRASLLTTLGMHKD-TDS------NSIEDPMSI 463

Query: 471 TGLETFSLSYKVRWPLSIVISWKSLSKYQLIFRFLFHCKHVERQLCWAWQ---------- 530
           TGLETFSLSYKV+WPLSIVIS K+LSKYQLIFRFLFHCKHVERQLC AWQ          
Sbjct: 464 TGLETFSLSYKVQWPLSIVISKKALSKYQLIFRFLFHCKHVERQLCGAWQIHQGIRSMNS 523

Query: 531 -----------------------------VLEPNWHVMHNRIQTAKSIDEVIRHHDFFLD 590
                                        VLEPNWHVMH+R+Q+ +S+DEVI+HHDFFLD
Sbjct: 524 KGTAILRSSLLCRSMLKFISSLLHYLTFEVLEPNWHVMHDRLQSTRSVDEVIQHHDFFLD 583

Query: 591 KCLRECLLLLPQLLKKVERLKLLCLQYAAATQCLISSSIDVCKSEESSNSLTRSETSKQW 650
           KCLR CLLLLP +LKK+E+LK +CLQYAAATQ LISSSID+        ++ R       
Sbjct: 584 KCLRGCLLLLPDVLKKMEKLKSVCLQYAAATQWLISSSIDINSQSHPQKTMIR------- 643

Query: 651 NGRTPKGAILSASNSTVTESILKFEKEFNSELQSLGPLLSKSSQAEPYLTHLAQWILGM 671
                        ++TVTESI  FE+EFNSELQSLGP+LSK SQAEPYLTHL+QWILG+
Sbjct: 644 -------------DTTVTESIFNFEREFNSELQSLGPVLSKGSQAEPYLTHLSQWILGV 675

[Close]

BLAST of CmaCh16G009780 vs. ExPASy Swiss-Prot
Match: Q921G8 (Gamma-tubulin complex component 2 OS=Mus musculus OX=10090 GN=Tubgcp2 PE=1 SV=2)

HSP 1 Score: 419.9 bits (1078), Expect = 5.6e-116
Identity = 226/585 (38.63%), Postives = 350/585 (59.83%), Query Frame = 0


Query: 42  TSRGPFSLGVSTSNGGLEKAIGCYDTAIQELIVIDDLLSALLGIEGRYISIKRVHGKENE 101
           T  G F +G   S+  +   IG    A QE  V++DLL  L+G++GRYI+ + + G++N 
Sbjct: 186 TLAGDFLIGSGLSSDTV-LPIGTLPLASQESAVVEDLLYVLVGVDGRYITAQPLAGRQNR 245

Query: 102 ISFQVDASMDLTLQELAKRIFPLCESFLFINQFVESRSQFKKGLVNHAFAAALRALLLDY 161
            +F VD ++DL+++EL  RI P+  S+  + +F+E +S F+ G VNHA AAA+R L+ +Y
Sbjct: 246 -TFLVDPNLDLSIRELVNRILPVAASYSTVTRFIEEKSSFEYGQVNHALAAAMRTLVKEY 305

Query: 162 QAMVAQLEHQFRLGRLSTQGLWFYCQPVMGSMQALSAVTRKVSASDIAGSAVLNLLQSQA 221
             +V QLE   R G LS Q LWFY QP M ++  L+++   V   +  G + L+LL  ++
Sbjct: 306 LILVTQLEQLHRQGLLSLQKLWFYIQPAMRTIDILASLATSVDKGECVGGSTLSLLHDRS 365

Query: 222 KAMAGDNAVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIVENKSLRKESLYQD 281
               GD+  + L   +T+ AS  Y  ILE+W+Y G+I DPY E F+VE   LRKE + +D
Sbjct: 366 FNYTGDSQAQELCLYLTKAASAPYFEILEKWIYRGIIHDPYSE-FMVEEHELRKEKIQED 425

Query: 282 YDTKYWRCRYS-LKEGIPTFLANIAGMILTTGKYLNVMRECGHNVQLPVSENSKLMSFGS 341
           Y+ KYW  RY+ L + IP+FL  +AG IL+TGKYLNV+RECGH+V  PV++  +++    
Sbjct: 426 YNDKYWDQRYTVLPQQIPSFLQKVAGKILSTGKYLNVVRECGHDVTCPVAK--EIIYTLK 485

Query: 342 NHQYLECIKAAYDFSSSELLKLIKEKYDLVVKLRSIKHYLLLDQGDFLVHFMDIARDELS 401
              Y+E I+ A++++S  LL  + E+ +LV  LRSIK Y L+DQGDF VHFMD+  +EL 
Sbjct: 486 ERAYVEQIEKAFNYASKVLLDFLMEEKELVAHLRSIKRYFLMDQGDFFVHFMDLTEEELR 545

Query: 402 KKLDDISVEKLQSLLDVALRSTAAAADPCHEDLTCCVERMSLPKSLRALKDLVDSRTLPG 461
           K ++DI + +L++LL++ALR + A  DP  +DL   +    L   L  +  +   +    
Sbjct: 546 KPVEDIILTRLEALLELALRMSTANTDPFKDDLKIELMPHDLITQLLRVLAIETKQEKAM 605

Query: 462 INDEEEPMGITGLETFSLSYKVRWPLSIVISWKSLSKYQLIFRFLFHCKHVERQLCWAW- 521
            + +   + ++GLE FS  Y V+WPLS++I+ K+L++YQ++FR +F+CKHVERQLC  W 
Sbjct: 606 THADPTELTLSGLEAFSFDYMVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSVWI 665

Query: 522 ---------------------------------------QVLEPNWHVMHNRIQTAKSID 581
                                                  +V+EP WH++   +++A +ID
Sbjct: 666 SNKTAKQHALHSAKWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASNID 725

Query: 582 EVIRHHDFFLDKCLRECLLLLPQLLKKVERLKLLCLQYAAATQCL 586
           +V+ HH  FLD CL++C+L  P+LLK   +L  +C+ +   T C+
Sbjct: 726 DVLGHHTSFLDNCLKDCMLTNPELLKVFSKLMSVCVMF---TNCM 762

[Close]

BLAST of CmaCh16G009780 vs. ExPASy Swiss-Prot
Match: Q9BSJ2 (Gamma-tubulin complex component 2 OS=Homo sapiens OX=9606 GN=TUBGCP2 PE=1 SV=2)

HSP 1 Score: 415.2 bits (1066), Expect = 1.4e-114
Identity = 222/582 (38.14%), Postives = 350/582 (60.14%), Query Frame = 0


Query: 45  GPFSLGVSTSNGGLEKAIGCYDTAIQELIVIDDLLSALLGIEGRYISIKRVHGKENEISF 104
           G F +G   S       IG    A QE  V++DLL  L+G++GRY+S + + G+++  +F
Sbjct: 189 GDFLIGAGIST-DTALPIGTLPLASQESAVVEDLLYVLVGVDGRYVSAQPLAGRQSR-TF 248

Query: 105 QVDASMDLTLQELAKRIFPLCESFLFINQFVESRSQFKKGLVNHAFAAALRALLLDYQAM 164
            VD ++DL+++EL  RI P+  S+  + +F+E +S F+ G VNHA AAA+R L+ ++  +
Sbjct: 249 LVDPNLDLSIRELVHRILPVAASYSAVTRFIEEKSSFEYGQVNHALAAAMRTLVKEHLIL 308

Query: 165 VAQLEHQFRLGRLSTQGLWFYCQPVMGSMQALSAVTRKVSASDIAGSAVLNLLQSQAKAM 224
           V+QLE   R G LS Q LWFY QP M +M  L+++   V   +  G + L+LL  ++ + 
Sbjct: 309 VSQLEQLHRQGLLSLQKLWFYIQPAMRTMDILASLATSVDKGECLGGSTLSLLHDRSFSY 368

Query: 225 AGDNAVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIVENKSLRKESLYQDYDT 284
            GD+  + L   +T+ AS  Y  +LE+W+Y G+I DPY E F+VE   LRKE + +DY+ 
Sbjct: 369 TGDSQAQELCLYLTKAASAPYFEVLEKWIYRGIIHDPYSE-FMVEEHELRKERIQEDYND 428

Query: 285 KYWRCRYSL-KEGIPTFLANIAGMILTTGKYLNVMRECGHNVQLPVSENSKLMSFGSNHQ 344
           KYW  RY++ ++ IP+FL  +A  IL+TGKYLNV+RECGH+V  PV++  +++       
Sbjct: 429 KYWDQRYTIVQQQIPSFLQKMADKILSTGKYLNVVRECGHDVTCPVAK--EIIYTLKERA 488

Query: 345 YLECIKAAYDFSSSELLKLIKEKYDLVVKLRSIKHYLLLDQGDFLVHFMDIARDELSKKL 404
           Y+E I+ A++++S  LL  + E+ +LV  LRSIK Y L+DQGDF VHFMD+A +EL K +
Sbjct: 489 YVEQIEKAFNYASKVLLDFLMEEKELVAHLRSIKRYFLMDQGDFFVHFMDLAEEELRKPV 548

Query: 405 DDISVEKLQSLLDVALRSTAAAADPCHEDLTCCVERMSLPKSLRALKDLVDSRTLPGIND 464
           +DI+  +L++LL++ALR + A  DP  +DL   +    L   L  +  +   +     + 
Sbjct: 549 EDITPPRLEALLELALRMSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMAHA 608

Query: 465 EEEPMGITGLETFSLSYKVRWPLSIVISWKSLSKYQLIFRFLFHCKHVERQLCWAW---- 524
           +   + ++GLE FS  Y V+WPLS++I+ K+L++YQ++FR +F+CKHVERQLC  W    
Sbjct: 609 DPTELALSGLEAFSFDYIVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSVWISNK 668

Query: 525 ------------------------------------QVLEPNWHVMHNRIQTAKSIDEVI 584
                                               +V+EP WH++   +++A +ID+V+
Sbjct: 669 TAKQHSLHSAQWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASNIDDVL 728

Query: 585 RHHDFFLDKCLRECLLLLPQLLKKVERLKLLCLQYAAATQCL 586
            HH  FLD CL++C+L  P+LLK   +L  +C+ +   T C+
Sbjct: 729 GHHTGFLDTCLKDCMLTNPELLKVFSKLMSVCVMF---TNCM 762

[Close]

BLAST of CmaCh16G009780 vs. ExPASy Swiss-Prot
Match: Q5R5J6 (Gamma-tubulin complex component 2 OS=Pongo abelii OX=9601 GN=TUBGCP2 PE=2 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.0e-113
Identity = 220/582 (37.80%), Postives = 350/582 (60.14%), Query Frame = 0


Query: 45  GPFSLGVSTSNGGLEKAIGCYDTAIQELIVIDDLLSALLGIEGRYISIKRVHGKENEISF 104
           G F +G   S       IG    A QE  V++DLL  L+G++GRY++ + + G+++  +F
Sbjct: 189 GDFLIGAGIST-DTALPIGTLPLASQESAVVEDLLYVLVGVDGRYVTAQPLAGRQSR-TF 248

Query: 105 QVDASMDLTLQELAKRIFPLCESFLFINQFVESRSQFKKGLVNHAFAAALRALLLDYQAM 164
            VD ++DL+++EL  RI P+  S+  + +F+E +S F+ G VNHA AAA+R L+ ++  +
Sbjct: 249 LVDPNLDLSIRELVNRILPVAASYSTVTRFIEEKSSFEYGQVNHALAAAMRTLVKEHLIL 308

Query: 165 VAQLEHQFRLGRLSTQGLWFYCQPVMGSMQALSAVTRKVSASDIAGSAVLNLLQSQAKAM 224
           V+QLE   R G LS Q LWFY QP M +M  L+++   V   +  G + L+LL  ++ + 
Sbjct: 309 VSQLEQLHRQGLLSLQKLWFYIQPAMRTMDILASLATSVDKGECLGGSTLSLLHDRSFSY 368

Query: 225 AGDNAVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIVENKSLRKESLYQDYDT 284
            GD+  + L   +T+ AS  Y  +LE+W+Y G+I DPY E F+VE   LRKE + +DY+ 
Sbjct: 369 TGDSQAQELCLYLTKAASAPYFEVLEKWIYRGIIHDPYSE-FMVEEHELRKERIQEDYND 428

Query: 285 KYWRCRYSL-KEGIPTFLANIAGMILTTGKYLNVMRECGHNVQLPVSENSKLMSFGSNHQ 344
           KYW  RY++ ++ IP+FL  +A  IL+TGKYLNV+RECGH+V  PV++  +++       
Sbjct: 429 KYWDQRYTIVQQQIPSFLQKMADKILSTGKYLNVVRECGHDVTCPVAK--EIIYTLKERA 488

Query: 345 YLECIKAAYDFSSSELLKLIKEKYDLVVKLRSIKHYLLLDQGDFLVHFMDIARDELSKKL 404
           Y+E I+ A++++S  LL  + E+ +LV  LRSIK Y L+DQGDF VHFMD+A +EL K +
Sbjct: 489 YVEQIEKAFNYASKVLLDFLMEEKELVAHLRSIKRYFLMDQGDFFVHFMDLAEEELRKPV 548

Query: 405 DDISVEKLQSLLDVALRSTAAAADPCHEDLTCCVERMSLPKSLRALKDLVDSRTLPGIND 464
           +DI+  +L++LL++ALR + A  DP  +DL   +    L   L  +  +   +     + 
Sbjct: 549 EDITPPRLEALLELALRMSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMAHA 608

Query: 465 EEEPMGITGLETFSLSYKVRWPLSIVISWKSLSKYQLIFRFLFHCKHVERQLCWAW---- 524
           +   + ++GLE FS  Y V+WPLS++I+ K+L++YQ++FR +F+CKHVERQLC  W    
Sbjct: 609 DPTELTLSGLEAFSFDYIVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSVWISNK 668

Query: 525 ------------------------------------QVLEPNWHVMHNRIQTAKSIDEVI 584
                                               +V+EP WH++   +++A +ID+V+
Sbjct: 669 TAKQHSLPSAQWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASNIDDVL 728

Query: 585 RHHDFFLDKCLRECLLLLPQLLKKVERLKLLCLQYAAATQCL 586
            +H  FLD CL++C+L  P+LLK   +L  +C+ +   T C+
Sbjct: 729 GYHTGFLDTCLKDCMLTNPELLKVFSKLMSVCVMF---TNCM 762

[Close]

BLAST of CmaCh16G009780 vs. ExPASy Swiss-Prot
Match: Q95ZG3 (Spindle pole body component 97 OS=Dictyostelium discoideum OX=44689 GN=spc97 PE=2 SV=2)

HSP 1 Score: 306.6 bits (784), Expect = 7.0e-82
Identity = 204/670 (30.45%), Postives = 333/670 (49.70%), Query Frame = 0


Query: 70   QELIVIDDLLSALLGIEGRYISIKRVHGKE------NEISFQVDASMDLTLQELAKRIFP 129
            +E I+I+DLLS ++GIEG  I I  V   E      N +SF V+  +D +  +L +RI P
Sbjct: 423  REQILIEDLLSTMIGIEGECIHIGVVQENEDDSLQSNLVSFVVEGEVDPSNNDLVQRILP 482

Query: 130  LCESFLFINQFVESRSQFKKGLVNHAFAAALRALLLDYQAMVAQLEHQFRLGRLSTQGLW 189
            LC  + F+N F++ R  ++ G++NH+   ++  LL +Y  +V+QLE Q +  RLS Q +W
Sbjct: 483  LCSYYSFVNDFIQIRYAYEWGIINHSLCFSIDQLLKEYLVLVSQLEGQLKSERLSLQRMW 542

Query: 190  FYCQPVMGSMQALSAVTRKVSASDIAGSAVLNLLQSQAKAMAGDNAVRSLLEKMTQCASN 249
            FY QP + + + L  VT ++   +  G  V+NLL       + D     L   + +  + 
Sbjct: 543  FYLQPTIKTFEILYRVTSEIMRCNSHGVQVINLLLKLQSKYSSDKKTDDLFHYLIKATTL 602

Query: 250  AYLGILERWVYEGVIDDPYGEFFIVENKSLRKESLYQDYDTKYWRCRYSLKEG-IPTFLA 309
             +L +L+ W+++G+I D Y EF I EN  L+++++ +D++  YW  RY +++  IP +L 
Sbjct: 603  PFLEMLDLWIHQGIIRDTYFEFMIEENTDLKRDNINRDFNDLYWEQRYQIRQDQIPKYLQ 662

Query: 310  NIAGMILTTGKYLNVMREC-------------------GHNVQLPVSENSKLMSFGSNHQ 369
            + A  ILTTGKYLNV+REC                    +NV+L   +   L+   +  Q
Sbjct: 663  SHALKILTTGKYLNVVRECNQSISQQQQHNKSDNNNNNNNNVKLNSQQQLLLLKLNTTQQ 722

Query: 370  ---------------------------YLECIKAAYDFSSSELLKLIKEKYDLVVKLRSI 429
                                       Y++ I+ AYD++S  LL L+  +  L+ +L++I
Sbjct: 723  QQQQQLSSTSASMIPTTIIEYSKNENVYIDKIEKAYDYASGILLNLLINERHLISRLKAI 782

Query: 430  KHYLLLDQGDFLVHFMDIARDELSKKLDDISVEKLQSLLDVALR-STAAAADPCHEDLTC 489
            KHY LL +GDF  HFMD   DEL K LD I++ K+ SLL ++LR S+ +  D   +DL C
Sbjct: 783  KHYFLLCKGDFFSHFMDTTYDELKKPLDQINMVKMNSLLQLSLRTSSISEEDEFKDDLEC 842

Query: 490  ------CVERM-----------------------------SLPKSLRALKDLVDSRTLPG 549
                   V+++                             +   +   +   V++  +  
Sbjct: 843  EFIPYKLVDQLLNIININNFNNPTTTTTTNTSSNNITATTNTSSNNTTINTTVNTTLIQS 902

Query: 550  INDEE--EPMGITGLETFSLSYKVRWPLSIVISWKSLSKYQLIFRFLFHCKHVERQLCWA 607
             +  E  +   + G+E+ + +Y V WPLS++IS KSL KYQ+IFR LF CKHVE+ L   
Sbjct: 903  TSAHEVLKTNKLFGIESLAFNYNVGWPLSLIISRKSLIKYQIIFRHLFLCKHVEKVLVDT 962

[Close]

BLAST of CmaCh16G009780 vs. TAIR 10
Match: AT5G17410.2 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 882.9 bits (2280), Expect = 1.7e-256
Identity = 464/658 (70.52%), Postives = 523/658 (79.48%), Query Frame = 0


Query: 52  STSNGGLEKAIGCYDTAIQELIVIDDLLSALLGIEGRYISIKRVHGKENEISFQVDASMD 111
           S+S+ G+E+AIGCYDT +QELIVIDDLLSAL+GIEGRYISIKR HGKE+ I+FQVD SMD
Sbjct: 46  SSSSSGVEQAIGCYDTPVQELIVIDDLLSALVGIEGRYISIKRFHGKEDSIAFQVDPSMD 105

Query: 112 LTLQELAKRIFPLCESFLFINQFVESRSQFKKGLVNHAFAAALRALLLDYQAMVAQLEHQ 171
           L LQELAKRIFPLCE +L I+QFVES SQFK GLVNHAFAAALRALLLDYQAMVAQLEHQ
Sbjct: 106 LALQELAKRIFPLCEYYLLIDQFVESSSQFKNGLVNHAFAAALRALLLDYQAMVAQLEHQ 165

Query: 172 FRLGRLSTQGLWFYCQPVMGSMQALSAVTRKVSASDIAGSAVLNLLQSQAKAMAGDNAVR 231
           FRLGRLS QGLWFYCQP+MGSM+AL+AV ++ S     GS VLNLLQSQAKAMAGDN+VR
Sbjct: 166 FRLGRLSIQGLWFYCQPMMGSMRALAAVIQQASTKQFVGSGVLNLLQSQAKAMAGDNSVR 225

Query: 232 SLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIVENKSLRKESLYQDYDTKYWRCRY 291
           SLLEKMT+CASNAYL ILERWVYEG+IDDPYGEFFI EN+SL+KESL QD   KYW  RY
Sbjct: 226 SLLEKMTECASNAYLSILERWVYEGIIDDPYGEFFIAENRSLKKESLSQDSTAKYWSQRY 285

Query: 292 SLKEGIPTFLANIAGMILTTGKYLNVMRECGHNVQLPVSENSKLMSFGSNHQYLECIKAA 351
           SLK+ IP FLANIA  ILTTGKYLNVMRECGHNVQ+P+SE SKL  FGSNH YLECIKAA
Sbjct: 286 SLKDTIPGFLANIAATILTTGKYLNVMRECGHNVQVPISERSKLTIFGSNHHYLECIKAA 345

Query: 352 YDFSSSELLKLIKEKYDLVVKLRSIKHYLLLDQGDFLVHFMDIARDELSKKLDDISVEKL 411
           ++F+S EL+ LIK+KYDLV +LRSIKHYLLLDQGDFLVHFMDIAR+EL+KK+ +ISVEKL
Sbjct: 346 HEFASIELVNLIKDKYDLVGRLRSIKHYLLLDQGDFLVHFMDIAREELNKKVHEISVEKL 405

Query: 412 QSLLDVALRSTAAAADPCHEDLTCCVERMSLPKSLRALKDLVDSRTLPGINDEEEPMGIT 471
           QSLLD+ALR+TAAAADP HEDLTCCV+R SL  +L   KD  DS      N  E+PM IT
Sbjct: 406 QSLLDLALRTTAAAADPRHEDLTCCVDRASLLTTLGMHKD-TDS------NSIEDPMSIT 465

Query: 472 GLETFSLSYKVRWPLSIVISWKSLSKYQLIFRFLFHCKHVERQLCWAWQ----------- 531
           GLETFSLSYKV+WPLSIVIS K+LSKYQLIFRFLFHCKHVERQLC AWQ           
Sbjct: 466 GLETFSLSYKVQWPLSIVISKKALSKYQLIFRFLFHCKHVERQLCGAWQIHQGIRSMNSK 525

Query: 532 ----------------------------VLEPNWHVMHNRIQTAKSIDEVIRHHDFFLDK 591
                                       VLEPNWHVMH+R+Q+ +S+DEVI+HHDFFLDK
Sbjct: 526 GTAILRSSLLCRSMLKFISSLLHYLTFEVLEPNWHVMHDRLQSTRSVDEVIQHHDFFLDK 585

Query: 592 CLRECLLLLPQLLKKVERLKLLCLQYAAATQCLISSSIDVCKSEESSNSLTRSETSKQWN 651
           CLR CLLLLP +LKK+E+LK +CLQYAAATQ LISSSID+        ++ R        
Sbjct: 586 CLRGCLLLLPDVLKKMEKLKSVCLQYAAATQWLISSSIDINSQSHPQKTMIR-------- 645

Query: 652 GRTPKGAILSASNSTVTESILKFEKEFNSELQSLGPLLSKSSQAEPYLTHLAQWILGM 671
                       ++TVTESI  FE+EFNSELQSLGP+LSK SQAEPYLTHL+QWILG+
Sbjct: 646 ------------DTTVTESIFNFEREFNSELQSLGPVLSKGSQAEPYLTHLSQWILGV 676

[Close]

BLAST of CmaCh16G009780 vs. TAIR 10
Match: AT5G17410.1 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 881.7 bits (2277), Expect = 3.7e-256
Identity = 463/659 (70.26%), Postives = 523/659 (79.36%), Query Frame = 0


Query: 51  VSTSNGGLEKAIGCYDTAIQELIVIDDLLSALLGIEGRYISIKRVHGKENEISFQVDASM 110
           + +S+ G+E+AIGCYDT +QELIVIDDLLSAL+GIEGRYISIKR HGKE+ I+FQVD SM
Sbjct: 44  LDSSSSGVEQAIGCYDTPVQELIVIDDLLSALVGIEGRYISIKRFHGKEDSIAFQVDPSM 103

Query: 111 DLTLQELAKRIFPLCESFLFINQFVESRSQFKKGLVNHAFAAALRALLLDYQAMVAQLEH 170
           DL LQELAKRIFPLCE +L I+QFVES SQFK GLVNHAFAAALRALLLDYQAMVAQLEH
Sbjct: 104 DLALQELAKRIFPLCEYYLLIDQFVESSSQFKNGLVNHAFAAALRALLLDYQAMVAQLEH 163

Query: 171 QFRLGRLSTQGLWFYCQPVMGSMQALSAVTRKVSASDIAGSAVLNLLQSQAKAMAGDNAV 230
           QFRLGRLS QGLWFYCQP+MGSM+AL+AV ++ S     GS VLNLLQSQAKAMAGDN+V
Sbjct: 164 QFRLGRLSIQGLWFYCQPMMGSMRALAAVIQQASTKQFVGSGVLNLLQSQAKAMAGDNSV 223

Query: 231 RSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIVENKSLRKESLYQDYDTKYWRCR 290
           RSLLEKMT+CASNAYL ILERWVYEG+IDDPYGEFFI EN+SL+KESL QD   KYW  R
Sbjct: 224 RSLLEKMTECASNAYLSILERWVYEGIIDDPYGEFFIAENRSLKKESLSQDSTAKYWSQR 283

Query: 291 YSLKEGIPTFLANIAGMILTTGKYLNVMRECGHNVQLPVSENSKLMSFGSNHQYLECIKA 350
           YSLK+ IP FLANIA  ILTTGKYLNVMRECGHNVQ+P+SE SKL  FGSNH YLECIKA
Sbjct: 284 YSLKDTIPGFLANIAATILTTGKYLNVMRECGHNVQVPISERSKLTIFGSNHHYLECIKA 343

Query: 351 AYDFSSSELLKLIKEKYDLVVKLRSIKHYLLLDQGDFLVHFMDIARDELSKKLDDISVEK 410
           A++F+S EL+ LIK+KYDLV +LRSIKHYLLLDQGDFLVHFMDIAR+EL+KK+ +ISVEK
Sbjct: 344 AHEFASIELVNLIKDKYDLVGRLRSIKHYLLLDQGDFLVHFMDIAREELNKKVHEISVEK 403

Query: 411 LQSLLDVALRSTAAAADPCHEDLTCCVERMSLPKSLRALKDLVDSRTLPGINDEEEPMGI 470
           LQSLLD+ALR+TAAAADP HEDLTCCV+R SL  +L   KD  DS      N  E+PM I
Sbjct: 404 LQSLLDLALRTTAAAADPRHEDLTCCVDRASLLTTLGMHKD-TDS------NSIEDPMSI 463

Query: 471 TGLETFSLSYKVRWPLSIVISWKSLSKYQLIFRFLFHCKHVERQLCWAWQ---------- 530
           TGLETFSLSYKV+WPLSIVIS K+LSKYQLIFRFLFHCKHVERQLC AWQ          
Sbjct: 464 TGLETFSLSYKVQWPLSIVISKKALSKYQLIFRFLFHCKHVERQLCGAWQIHQGIRSMNS 523

Query: 531 -----------------------------VLEPNWHVMHNRIQTAKSIDEVIRHHDFFLD 590
                                        VLEPNWHVMH+R+Q+ +S+DEVI+HHDFFLD
Sbjct: 524 KGTAILRSSLLCRSMLKFISSLLHYLTFEVLEPNWHVMHDRLQSTRSVDEVIQHHDFFLD 583

Query: 591 KCLRECLLLLPQLLKKVERLKLLCLQYAAATQCLISSSIDVCKSEESSNSLTRSETSKQW 650
           KCLR CLLLLP +LKK+E+LK +CLQYAAATQ LISSSID+        ++ R       
Sbjct: 584 KCLRGCLLLLPDVLKKMEKLKSVCLQYAAATQWLISSSIDINSQSHPQKTMIR------- 643

Query: 651 NGRTPKGAILSASNSTVTESILKFEKEFNSELQSLGPLLSKSSQAEPYLTHLAQWILGM 671
                        ++TVTESI  FE+EFNSELQSLGP+LSK SQAEPYLTHL+QWILG+
Sbjct: 644 -------------DTTVTESIFNFEREFNSELQSLGPVLSKGSQAEPYLTHLSQWILGV 675

[Close]

BLAST of CmaCh16G009780 vs. TAIR 10
Match: AT5G06680.1 (spindle pole body component 98 )

HSP 1 Score: 137.1 bits (344), Expect = 5.2e-32
Identity = 130/505 (25.74%), Postives = 225/505 (44.55%), Query Frame = 0


Query: 66  DTAIQELIVIDDLLSALLGIEGRYISI-KRVHGKENEISFQVDASMDLTLQELAKRIFPL 125
           +  + E +++ D+L A  GI+G+Y+     + G   + S +V  +  + ++ L++  +  
Sbjct: 181 ENEVTEEVLVRDVLYASQGIDGKYVKFNSEIDGYAVQESVKVPRATRIMVRMLSELGWLF 240

Query: 126 CESFLFINQFVESRSQFKKGLVNHAFAAALRALLLDYQAMVAQLEHQ------------- 185
            +   FI + ++       G V  AF AAL+  L DY  ++A LE Q             
Sbjct: 241 RKVKTFITESMDRFPAEDVGTVGQAFCAALQDELSDYYKLLAVLEAQAMNPIPLVSESAS 300

Query: 186 ----FRLGRLSTQGLWFYCQPVMGSMQALSAVTRKVSASDIAGSAVLNLLQSQAKAMAGD 245
                 L RLS   +WF  +P M  M+ ++ +  K     + G A+   +   A+   GD
Sbjct: 301 SNNYLSLRRLS---VWF-AEP-MVKMRLMAVLVDKCKV--LRGGAMAGAIHLHAQ--HGD 360

Query: 246 NAVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIVENKSLRKESLYQDYDTKYW 305
             V   +  + +C  +    ++  WV EG ++D +GEFF+V  + ++ + L        W
Sbjct: 361 PLVHDFMMSLLRCVCSPLFEMVRSWVLEGELEDTFGEFFVV-GQPVKVDLL--------W 420

Query: 306 RCRYSLKEG-IPTFLA-NIAGMILTTGKYLNVMREC--GHNVQLPVSENSKL-------- 365
           R  Y L    +P+F++ ++A  IL TGK +N +R C   H      SE +          
Sbjct: 421 REGYKLHPAMLPSFISPSLAQRILRTGKSINFLRVCCDDHGWADAASEAAAASGTTTRRG 480

Query: 366 -MSFGSNHQYLECIKAAYDFSSSELLKLIKEKYDLVVKLRSIKHYLLLDQGDFLVHFMDI 425
            + +G        +  A       LL ++ ++Y       +IK YLLL QGDF+ + MDI
Sbjct: 481 GLGYGETDALEHLVTEAAKRIDKHLLDVLYKRYKFKEHCLAIKRYLLLGQGDFVQYLMDI 540

Query: 426 ARDELSKKLDDISVEKLQSLLDVALRSTAAAADPCHEDLTCCVERMSLPKSLRALKDLVD 485
              +LS+  ++IS  +L   L+ A+R++ A  D                   R + D + 
Sbjct: 541 VGPKLSEPANNISSFELAGFLEAAIRASNAQYDD------------------RDMLDRLR 600

Query: 486 SRTLPGINDEEEPMGITGLETFSLSYKVRWPLSIVISWKSLSKYQLIFRFLFHCKHVERQ 540
            + +P         G  G + FSL Y+ R PL  V +   LSKY  +F FL+  K VE  
Sbjct: 601 VKMMP------HGSGDRGWDVFSLEYEARVPLDTVFTESVLSKYLRVFNFLWKLKRVEHA 643

[Close]

BLAST of CmaCh16G009780 vs. TAIR 10
Match: AT3G53760.1 (GAMMA-TUBULIN COMPLEX PROTEIN 4 )

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-07
Identity = 57/290 (19.66%), Postives = 117/290 (40.34%), Query Frame = 0


Query: 346 EC-IKAAYDFSSSELLKLIKEKYDLVVKLRSIKHYLLLDQGDFLVHFMDIARDELSKKLD 405
           EC + +    ++S L +L+  + DL   L+++K Y LL++GDF   F++ +R +L +   
Sbjct: 377 ECTVDSVRAIAASHLWQLVVVRADLNGHLKALKDYFLLEKGDFFQCFLEESR-QLMRLPP 436

Query: 406 DISVEKLQSLLDVALRSTAAAADPCHEDLTCCVERMSLPKSLRALK-DLVDSR-TLPGIN 465
             S  +   ++   L +T   A+         +   S   ++R+ + D+V S+ +L G  
Sbjct: 437 RQSTGESDLMVPFQLAATKTIAEEDKYFSRVSLRMPSFGVTVRSSQADMVRSKVSLTGKA 496

Query: 466 DEEEPMGITGLETFSLSYKVRWPLSIVISWKSLSKYQLIFRFLFHCKHVERQLCWAW--- 525
           +      + G +  +L Y V WP+ +  + + LSKY  +F++L   K  + +L  +W   
Sbjct: 497 NLTSDTSVDGWDAIALEYSVDWPMQLFFTQEVLSKYLKVFQYLIRLKRTQMELEKSWASV 556

Query: 526 ---------------------------------------------------QVLEPNWHV 579
                                                               V+E  W V
Sbjct: 557 MHQDHIESAQHRKDGLNGSTSQQRRQGIRPMWRVREHMAFLIRNLQFYIQVDVIESQWKV 616

[Close]

BLAST of CmaCh16G009780 vs. TAIR 10
Match: AT3G43610.1 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 50.1 bits (118), Expect = 8.3e-06
Identity = 42/189 (22.22%), Postives = 85/189 (44.97%), Query Frame = 0


Query: 345  LECIKAAYDFSSSELLKLIKEKYDLVVKLRSIKHYLLLDQGDFL-VHFMDIARDELSKKL 404
            L+ I   Y+F S   +KL++E + L   L +++ Y  ++  D+  V  + +   +     
Sbjct: 855  LQEIHLQYNFVSKLAIKLLEEGFGLQEHLLALRRYHFMELADWADVFVVSLWHHKWLVTE 914

Query: 405  DDISVEKLQSLLDVALRSTAAAADPCHEDLTCCVERMSLPKSLRALKDLVDSRTLPGIND 464
             D  + ++Q  L+ +++ ++     C  D+  C +R+ L K    +            + 
Sbjct: 915  ADKRIAEIQGFLESSIQRSS-----CERDI--CKDRIFLYKRQGTM------------HI 974

Query: 465  EEEPMGITGLETFSLSYKVRWPLSIVISWKSLSKYQLIFRFLFHCKHVERQLCWAWQVLE 524
                +G+   +   L Y+V WP+SI+++  +L+ Y  +F FL   K     L   W  L+
Sbjct: 975  PPSTIGVRSFDFLRLGYRVDWPISIILTCDALTAYADVFSFLVQVKLAAYVLTDVWCSLK 1024

Query: 525  PNWHVMHNR 533
               H+MH +
Sbjct: 1035 DVRHMMHEK 1024

The following BLAST results are available for this feature:

BLAST of CmaCh16G009780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5H9	5.2e-255	70.26	Gamma-tubulin complex component 2 OS=Arabidopsis thaliana OX=3702 GN=GCP2 PE=1 S...	[more]
Q921G8	5.6e-116	38.63	Gamma-tubulin complex component 2 OS=Mus musculus OX=10090 GN=Tubgcp2 PE=1 SV=2	[more]
Q9BSJ2	1.4e-114	38.14	Gamma-tubulin complex component 2 OS=Homo sapiens OX=9606 GN=TUBGCP2 PE=1 SV=2	[more]
Q5R5J6	2.0e-113	37.80	Gamma-tubulin complex component 2 OS=Pongo abelii OX=9601 GN=TUBGCP2 PE=2 SV=1	[more]
Q95ZG3	7.0e-82	30.45	Spindle pole body component 97 OS=Dictyostelium discoideum OX=44689 GN=spc97 PE=...	[more]

BLAST of CmaCh16G009780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17410.2	1.7e-256	70.52	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT5G17410.1	3.7e-256	70.26	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT5G06680.1	5.2e-32	25.74	spindle pole body component 98	[more]
AT3G53760.1	2.6e-07	19.66	GAMMA-TUBULIN COMPLEX PROTEIN 4	[more]
AT3G43610.1	8.3e-06	22.22	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 151..171
None	No IPR available	PANTHER	PTHR19302:SF13	GAMMA-TUBULIN COMPLEX COMPONENT 2	coord: 44..668
IPR042241	Gamma-tubulin complex, C-terminal domain superfamily	GENE3D	1.20.120.1900		coord: 520..672 e-value: 4.8E-19 score: 70.6
IPR042241	Gamma-tubulin complex, C-terminal domain superfamily	GENE3D	1.20.120.1900		coord: 369..519 e-value: 7.4E-41 score: 142.3
IPR041470	Gamma tubulin complex component protein, N-terminal	PFAM	PF17681	GCP_N_terminal	coord: 75..366 e-value: 3.5E-69 score: 233.8
IPR040457	Gamma tubulin complex component, C-terminal	PFAM	PF04130	GCP_C_terminal	coord: 520..663 e-value: 2.1E-15 score: 57.0 coord: 369..519 e-value: 3.2E-35 score: 122.0
IPR007259	Gamma-tubulin complex component protein	PANTHER	PTHR19302	GAMMA TUBULIN COMPLEX PROTEIN	coord: 44..668

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G009780.1	CmaCh16G009780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0007020	microtubule nucleation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005815	microtubule organizing center
cellular_component	GO:0000922	spindle pole
molecular_function	GO:0043015	gamma-tubulin binding
molecular_function	GO:0016787	hydrolase activity