CmaCh16G009730 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G009730
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor MYB80-like
Location	Cma_Chr16: 7497446 .. 7499059 (-)
RNA-Seq Expression	CmaCh16G009730
Synteny	CmaCh16G009730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACAAAACAAAAAAAAAAAAAAAAACACTGAGAAAGACAGACAAAAAGGAAAGAAAAATGGGCAGAATTCCATGTTGTGAGAAGGAAAATGTTAAGAGAGGACAGTGGACTCCTGAAGAAGATAACAAGCTGTCGTCCTACATCGTCCAGCACGGCACTCGAAACTGGCGCCTTATCCCCAAGAATGCCGGTATCACTTTCTCTCTTTACAAACATTTCACACCATTACCTTACTCAATGTCTAATGCTGCTATCACATTCAGGTCTCCAAAGATGTGGGAAGAGCTGTCGGCTACGTTGGACTAATTACCTTCGCCCTGACCTGAAGCACGGCCAGTTTTCTGATATGGAAGAACAAACTATTGTCAAGCTACATTCTGTTGTTGGCAACAGGTACACTGTCTTCTTAATGTCAACATTGTTAGGAATCACGGATCTCCGCTATGGTGTATGATATTGCCTGATTTGCTTTTGGGATTTTAAAAGAAATTGTTAAGTCTTTTGTTGAGGGAAATGGTTAGTAGTTGCTTAACTTGAGGAGAAAGTTTAACAAACTAGTTGTGCTTTCTCCCGTGTAAATACTCATGAGATGTATGCTATATTCACAACCGCAGAGAGAATTGAAAAGCATAAGTGCTTAAGTTTCCTTCTTCAAAAGCTCTCTCCTGCTTCAGTTATTATGTTGGTTGGGGAGGAGAACGAAAAACTTTTTTATAAGGGGGTGGAAACCTCTCTTTAGCAGACGTGTTTTAAAGCCTTGAGGGGAACCCAAAAGAGAAAGCCCAAATAGGACAATATAGGCTAGCGGTGGGCTAGGCCGTTACATATTTCGATCGTGGGTCATTTCCAACAAACATTGTTTATGAATTGTGTATTATGACTTTGTTGTATAAAAGAGGATCGATTTCGACTCTGCAGGTGGTCATTGATTGCAGCTCAGTTACCTGGTCGAACCGATAATGATGTCAAGAATCACTGGAACACTAAGTTGAAGAAGAAGCTATCAGGAATGGGCATTGATCCAGTCACTCACAAGCCATTCTCCCATCTCATGGCTGAAATCGCCACCACTCTGGCTCCTCCACAAGTTTCCCATCTTGCCGAAGCAGCGCTCGGCTGCTTCAAAGACGAAATGCTTCACCTTCTTACAAAGAAGCGCGTCGATTTCCAGCTTCAACAAGCTAACGTACCGCCTGGAAGCACAACAGGAATGTACATTCATGGCAAACAAAATGAGAAAGATGGTACTGTTGAGAATATCAAACTTGGTTTGTCAAGAGCCATTCAACAGCCTGATCTCATCTCCCCTTATAAGCCTTGGAATTCTACTGATGCAGTAGGGACAAGCAATTGTTTTCCTGCATCAACGTCGGAGTTCCAATACGGTCCGCTGTCGTTCGGGACCGAGGGGGACGGATCGTCATGGAGCCAGAGCTTATGTACGGGAAGTACGTGCACGGCAGAACAGGGGCAACTGCATGAAATTCTTGAAGAAACAGAAGAAGAGCTATCAGAGAATGGAAAAGAGATGAGAAATAGGACAAGTATTTTCAGTTCAAACTCAGTGTTGTGGGATTTACCATGTGATGATCTGATGAATCCAATAGTCTGA

mRNA sequence

AAAACAAAACAAAAAAAAAAAAAAAAACACTGAGAAAGACAGACAAAAAGGAAAGAAAAATGGGCAGAATTCCATGTTGTGAGAAGGAAAATGTTAAGAGAGGACAGTGGACTCCTGAAGAAGATAACAAGCTGTCGTCCTACATCGTCCAGCACGGCACTCGAAACTGGCGCCTTATCCCCAAGAATGCCGGTCTCCAAAGATGTGGGAAGAGCTGTCGGCTACGTTGGACTAATTACCTTCGCCCTGACCTGAAGCACGGCCAGTTTTCTGATATGGAAGAACAAACTATTGTCAAGCTACATTCTGTTGTTGGCAACAGGTGGTCATTGATTGCAGCTCAGTTACCTGGTCGAACCGATAATGATGTCAAGAATCACTGGAACACTAAGTTGAAGAAGAAGCTATCAGGAATGGGCATTGATCCAGTCACTCACAAGCCATTCTCCCATCTCATGGCTGAAATCGCCACCACTCTGGCTCCTCCACAAGTTTCCCATCTTGCCGAAGCAGCGCTCGGCTGCTTCAAAGACGAAATGCTTCACCTTCTTACAAAGAAGCGCGTCGATTTCCAGCTTCAACAAGCTAACGTACCGCCTGGAAGCACAACAGGAATGTACATTCATGGCAAACAAAATGAGAAAGATGGTACTGTTGAGAATATCAAACTTGGTTTGTCAAGAGCCATTCAACAGCCTGATCTCATCTCCCCTTATAAGCCTTGGAATTCTACTGATGCAGTAGGGACAAGCAATTGTTTTCCTGCATCAACGTCGGAGTTCCAATACGGTCCGCTGTCGTTCGGGACCGAGGGGGACGGATCGTCATGGAGCCAGAGCTTATGTACGGGAAGTACGTGCACGGCAGAACAGGGGCAACTGCATGAAATTCTTGAAGAAACAGAAGAAGAGCTATCAGAGAATGGAAAAGAGATGAGAAATAGGACAAGTATTTTCAGTTCAAACTCAGTGTTGTGGGATTTACCATGTGATGATCTGATGAATCCAATAGTCTGA

Coding sequence (CDS)

ATGGGCAGAATTCCATGTTGTGAGAAGGAAAATGTTAAGAGAGGACAGTGGACTCCTGAAGAAGATAACAAGCTGTCGTCCTACATCGTCCAGCACGGCACTCGAAACTGGCGCCTTATCCCCAAGAATGCCGGTCTCCAAAGATGTGGGAAGAGCTGTCGGCTACGTTGGACTAATTACCTTCGCCCTGACCTGAAGCACGGCCAGTTTTCTGATATGGAAGAACAAACTATTGTCAAGCTACATTCTGTTGTTGGCAACAGGTGGTCATTGATTGCAGCTCAGTTACCTGGTCGAACCGATAATGATGTCAAGAATCACTGGAACACTAAGTTGAAGAAGAAGCTATCAGGAATGGGCATTGATCCAGTCACTCACAAGCCATTCTCCCATCTCATGGCTGAAATCGCCACCACTCTGGCTCCTCCACAAGTTTCCCATCTTGCCGAAGCAGCGCTCGGCTGCTTCAAAGACGAAATGCTTCACCTTCTTACAAAGAAGCGCGTCGATTTCCAGCTTCAACAAGCTAACGTACCGCCTGGAAGCACAACAGGAATGTACATTCATGGCAAACAAAATGAGAAAGATGGTACTGTTGAGAATATCAAACTTGGTTTGTCAAGAGCCATTCAACAGCCTGATCTCATCTCCCCTTATAAGCCTTGGAATTCTACTGATGCAGTAGGGACAAGCAATTGTTTTCCTGCATCAACGTCGGAGTTCCAATACGGTCCGCTGTCGTTCGGGACCGAGGGGGACGGATCGTCATGGAGCCAGAGCTTATGTACGGGAAGTACGTGCACGGCAGAACAGGGGCAACTGCATGAAATTCTTGAAGAAACAGAAGAAGAGCTATCAGAGAATGGAAAAGAGATGAGAAATAGGACAAGTATTTTCAGTTCAAACTCAGTGTTGTGGGATTTACCATGTGATGATCTGATGAATCCAATAGTCTGA

Protein sequence

MGRIPCCEKENVKRGQWTPEEDNKLSSYIVQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGQFSDMEEQTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMGIDPVTHKPFSHLMAEIATTLAPPQVSHLAEAALGCFKDEMLHLLTKKRVDFQLQQANVPPGSTTGMYIHGKQNEKDGTVENIKLGLSRAIQQPDLISPYKPWNSTDAVGTSNCFPASTSEFQYGPLSFGTEGDGSSWSQSLCTGSTCTAEQGQLHEILEETEEELSENGKEMRNRTSIFSSNSVLWDLPCDDLMNPIV

Homology

[Close]

BLAST of CmaCh16G009730 vs. ExPASy Swiss-Prot
Match: Q7XQN1 (Transcription factor MYB80 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB80 PE=2 SV=2)

HSP 1 Score: 368.2 bits (944), Expect = 9.2e-101
Identity = 212/374 (56.68%), Postives = 251/374 (67.11%), Query Frame = 0


Query: 1   MGRIPCCEKENVKRGQWTPEEDNKLSSYIVQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60
           MGR+PCCEK+NVKRGQWTPEEDNKL SYI Q+GTRNWRLIPKNAGLQRCGKSCRLRWTNY
Sbjct: 1   MGRVPCCEKDNVKRGQWTPEEDNKLLSYITQYGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60

Query: 61  LRPDLKHGQFSDMEEQTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMG 120
           LRPDLKHG+F+D EEQTI+KLHSVVGNRWS+IAAQLPGRTDNDVKNHWNTKLKKKLSGMG
Sbjct: 61  LRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNHWNTKLKKKLSGMG 120

Query: 121 IDPVTHKPFSHLMAEIATTLAPPQVSHLAEAALGCFKDEMLHLLTKKRVDFQLQQANVPP 180
           IDPVTHK FSHLMAEIATTLAPPQV+HLAEAALGCFKDEMLHLLTKKR         V  
Sbjct: 121 IDPVTHKSFSHLMAEIATTLAPPQVAHLAEAALGCFKDEMLHLLTKKRPS-DFPSPAVHD 180

Query: 181 GSTTGMYIHG-----------KQNEKDGTVENIKLGLSRAIQQ-------------PDLI 240
           G+  G                   + D T+E IKLGLSRAI               P   
Sbjct: 181 GAGAGASASALAAPCFPAAPPHHPQADDTIERIKLGLSRAIMSDPSTASAAAAAAAPSAP 240

Query: 241 SPYKPWNSTD-AVGTSNCF----PA------STSEFQYGPLS------FGTEGD--GSSW 300
           +  KPW   D + G +  +    PA      + +EF+Y   S       G +GD   S W
Sbjct: 241 AEDKPWPPGDMSEGLAGMYATYNPAAHAHAQAQAEFRYDGASAAQGYVLGGDGDQGTSMW 300

Query: 301 S-QSLCTGSTCTAE-QGQLHEILEET------EEELSENGKE-----MRNRTSIFSSNSV 319
           S QSL +GS+ T E + +L E   ++      +++ +++GK+       + + +F+S+ V
Sbjct: 301 SHQSLYSGSSGTEEARRELPEKGNDSVGSSGGDDDAADDGKDSGKGAASDMSGLFASDCV 360

[Close]

BLAST of CmaCh16G009730 vs. ExPASy Swiss-Prot
Match: Q9XHV0 (Transcription factor MYB80 OS=Arabidopsis thaliana OX=3702 GN=MYB80 PE=1 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.5e-98
Identity = 196/327 (59.94%), Postives = 225/327 (68.81%), Query Frame = 0


Query: 1   MGRIPCCEKENVKRGQWTPEEDNKLSSYIVQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60
           MGRIPCCEKENVKRGQWTPEEDNKL+SYI QHGTRNWRLIPKNAGLQRCGKSCRLRWTNY
Sbjct: 1   MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60

Query: 61  LRPDLKHGQFSDMEEQTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMG 120
           LRPDLKHGQFS+ EE  IVK HSV+GNRWSLIAAQLPGRTDNDVKN+WNTKLKKKLSGMG
Sbjct: 61  LRPDLKHGQFSEAEEHIIVKFHSVLGNRWSLIAAQLPGRTDNDVKNYWNTKLKKKLSGMG 120

Query: 121 IDPVTHKPFSHLMAEIATTLAPPQVSHLAEAALGCFKDEMLHLLTKKRVDFQLQQANVPP 180
           IDPVTHKPFSHLMAEI TTL PPQVSHLAEAALGCFKDEMLHLLTKKRVD  L Q N   
Sbjct: 121 IDPVTHKPFSHLMAEITTTLNPPQVSHLAEAALGCFKDEMLHLLTKKRVD--LNQINFSN 180

Query: 181 GSTTGMYIHGKQNEKDGTVENIKLGLSRAIQQP-DLISPYKPWNSTDAVGTSNCFPASTS 240
            +      H   + + G ++   L     I +  D+ + +   +S+ + G       S S
Sbjct: 181 HNPNPNNFHEIADNEAGKIKMDGLDHGNGIMKLWDMGNGFSYGSSSSSFGNEERNDGSAS 240

Query: 241 EFQYGPLSFGTEGDGSSWSQSLCTGSTCTAEQGQLHEILEETEEELSENGK-----EMRN 300
                P      G G   +    T +    E+ +L   + + EE  SE G+      MRN
Sbjct: 241 -----PAVAAWRGHGGIRTAVAETAAAEEEERRKLKGEVVDQEEIGSEGGRGDGMTMMRN 300

Query: 301 ---RTSIFSSNSVLWDLPCDDLMNPIV 319
                 +F+ ++VLWDL  DDL+N +V
Sbjct: 301 HHHHQHVFNVDNVLWDLQADDLINHMV 320

[Close]

BLAST of CmaCh16G009730 vs. ExPASy Swiss-Prot
Match: Q9LSI7 (Transcription factor MYB35 OS=Arabidopsis thaliana OX=3702 GN=MYB35 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.1e-56
Identity = 96/135 (71.11%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 1   MGRIPCCEKENVKRGQWTPEEDNKLSSYIVQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60
           MGR PCC+K NVK+G WT EED K+ +Y+  HG  NW LIPK AGL RCGKSCRLRWTNY
Sbjct: 1   MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLKHGQFSDMEEQTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMG 120
           LRPDLKH  FS  EE+ I++ H  +G+RWS IA +LPGRTDNDVKNHWNTKLKKKL  MG
Sbjct: 61  LRPDLKHDSFSTQEEELIIECHRAIGSRWSSIARKLPGRTDNDVKNHWNTKLKKKLMKMG 120

Query: 121 IDPVTHKPFSHLMAE 136
           IDPVTHKP S L+AE
Sbjct: 121 IDPVTHKPVSQLLAE 135

[Close]

BLAST of CmaCh16G009730 vs. ExPASy Swiss-Prot
Match: Q9M0J5 (Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB41 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.9e-53
Identity = 96/166 (57.83%), Postives = 118/166 (71.08%), Query Frame = 0


Query: 1   MGRIPCCEKENVKRGQWTPEEDNKLSSYIVQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60
           MGR PCC+K  VK+G WT EED KL  YI  HG  NWR +PKNAGL RCGKSCRLRWTNY
Sbjct: 1   MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRLRWTNY 60

Query: 61  LRPDLKHGQFSDMEEQTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMG 120
           LRPD+K G+FS  EE+TI++LHSV+GN+WS IAA+LPGRTDN++KNHWNT ++K+L   G
Sbjct: 61  LRPDIKRGRFSFEEEETIIQLHSVMGNKWSAIAARLPGRTDNEIKNHWNTHIRKRLVRSG 120

Query: 121 IDPVTHKP---FSHLMAEIATTLAPPQVSHLAEAALGCFKDEMLHL 164
           IDPVTH P      L + ++     P  S +A  A      ++L L
Sbjct: 121 IDPVTHSPRLDLLDLSSLLSALFNQPNFSAVATHASSLLNPDVLRL 166

[Close]

BLAST of CmaCh16G009730 vs. ExPASy Swiss-Prot
Match: Q9M0Y5 (Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.9e-53
Identity = 91/129 (70.54%), Postives = 110/129 (85.27%), Query Frame = 0


Query: 1   MGRIPCCEKEN-VKRGQWTPEEDNKLSSYIVQHGTRNWRLIPKNAGLQRCGKSCRLRWTN 60
           MGR PCCEK+N +K+G WTPEED KL  YI  HG  NWR +PKNAGLQRCGKSCRLRWTN
Sbjct: 1   MGRSPCCEKKNGLKKGPWTPEEDQKLIDYINIHGYGNWRTLPKNAGLQRCGKSCRLRWTN 60

Query: 61  YLRPDLKHGQFSDMEEQTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGM 120
           YLRPD+K G+FS  EE+TI++LHS++GN+WS IAA+LPGRTDN++KN+WNT ++K+L  M
Sbjct: 61  YLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLKM 120

Query: 121 GIDPVTHKP 129
           GIDPVTH P
Sbjct: 121 GIDPVTHTP 129

[Close]

BLAST of CmaCh16G009730 vs. TAIR 10
Match: AT5G56110.1 (myb domain protein 103 )

HSP 1 Score: 360.9 bits (925), Expect = 1.0e-99
Identity = 196/327 (59.94%), Postives = 225/327 (68.81%), Query Frame = 0


Query: 1   MGRIPCCEKENVKRGQWTPEEDNKLSSYIVQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60
           MGRIPCCEKENVKRGQWTPEEDNKL+SYI QHGTRNWRLIPKNAGLQRCGKSCRLRWTNY
Sbjct: 1   MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60

Query: 61  LRPDLKHGQFSDMEEQTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMG 120
           LRPDLKHGQFS+ EE  IVK HSV+GNRWSLIAAQLPGRTDNDVKN+WNTKLKKKLSGMG
Sbjct: 61  LRPDLKHGQFSEAEEHIIVKFHSVLGNRWSLIAAQLPGRTDNDVKNYWNTKLKKKLSGMG 120

Query: 121 IDPVTHKPFSHLMAEIATTLAPPQVSHLAEAALGCFKDEMLHLLTKKRVDFQLQQANVPP 180
           IDPVTHKPFSHLMAEI TTL PPQVSHLAEAALGCFKDEMLHLLTKKRVD  L Q N   
Sbjct: 121 IDPVTHKPFSHLMAEITTTLNPPQVSHLAEAALGCFKDEMLHLLTKKRVD--LNQINFSN 180

Query: 181 GSTTGMYIHGKQNEKDGTVENIKLGLSRAIQQP-DLISPYKPWNSTDAVGTSNCFPASTS 240
            +      H   + + G ++   L     I +  D+ + +   +S+ + G       S S
Sbjct: 181 HNPNPNNFHEIADNEAGKIKMDGLDHGNGIMKLWDMGNGFSYGSSSSSFGNEERNDGSAS 240

Query: 241 EFQYGPLSFGTEGDGSSWSQSLCTGSTCTAEQGQLHEILEETEEELSENGK-----EMRN 300
                P      G G   +    T +    E+ +L   + + EE  SE G+      MRN
Sbjct: 241 -----PAVAAWRGHGGIRTAVAETAAAEEEERRKLKGEVVDQEEIGSEGGRGDGMTMMRN 300

Query: 301 ---RTSIFSSNSVLWDLPCDDLMNPIV 319
                 +F+ ++VLWDL  DDL+N +V
Sbjct: 301 HHHHQHVFNVDNVLWDLQADDLINHMV 320

[Close]

BLAST of CmaCh16G009730 vs. TAIR 10
Match: AT3G28470.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 220.3 bits (560), Expect = 2.2e-57
Identity = 96/135 (71.11%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 1   MGRIPCCEKENVKRGQWTPEEDNKLSSYIVQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60
           MGR PCC+K NVK+G WT EED K+ +Y+  HG  NW LIPK AGL RCGKSCRLRWTNY
Sbjct: 1   MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDLKHGQFSDMEEQTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMG 120
           LRPDLKH  FS  EE+ I++ H  +G+RWS IA +LPGRTDNDVKNHWNTKLKKKL  MG
Sbjct: 61  LRPDLKHDSFSTQEEELIIECHRAIGSRWSSIARKLPGRTDNDVKNHWNTKLKKKLMKMG 120

Query: 121 IDPVTHKPFSHLMAE 136
           IDPVTHKP S L+AE
Sbjct: 121 IDPVTHKPVSQLLAE 135

[Close]

BLAST of CmaCh16G009730 vs. TAIR 10
Match: AT4G05100.1 (myb domain protein 74 )

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-54
Identity = 91/129 (70.54%), Postives = 110/129 (85.27%), Query Frame = 0


Query: 1   MGRIPCCEKEN-VKRGQWTPEEDNKLSSYIVQHGTRNWRLIPKNAGLQRCGKSCRLRWTN 60
           MGR PCCEK+N +K+G WTPEED KL  YI  HG  NWR +PKNAGLQRCGKSCRLRWTN
Sbjct: 1   MGRSPCCEKKNGLKKGPWTPEEDQKLIDYINIHGYGNWRTLPKNAGLQRCGKSCRLRWTN 60

Query: 61  YLRPDLKHGQFSDMEEQTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGM 120
           YLRPD+K G+FS  EE+TI++LHS++GN+WS IAA+LPGRTDN++KN+WNT ++K+L  M
Sbjct: 61  YLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLKM 120

Query: 121 GIDPVTHKP 129
           GIDPVTH P
Sbjct: 121 GIDPVTHTP 129

[Close]

BLAST of CmaCh16G009730 vs. TAIR 10
Match: AT4G28110.1 (myb domain protein 41 )

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-54
Identity = 96/166 (57.83%), Postives = 118/166 (71.08%), Query Frame = 0


Query: 1   MGRIPCCEKENVKRGQWTPEEDNKLSSYIVQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60
           MGR PCC+K  VK+G WT EED KL  YI  HG  NWR +PKNAGL RCGKSCRLRWTNY
Sbjct: 1   MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRLRWTNY 60

Query: 61  LRPDLKHGQFSDMEEQTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMG 120
           LRPD+K G+FS  EE+TI++LHSV+GN+WS IAA+LPGRTDN++KNHWNT ++K+L   G
Sbjct: 61  LRPDIKRGRFSFEEEETIIQLHSVMGNKWSAIAARLPGRTDNEIKNHWNTHIRKRLVRSG 120

Query: 121 IDPVTHKP---FSHLMAEIATTLAPPQVSHLAEAALGCFKDEMLHL 164
           IDPVTH P      L + ++     P  S +A  A      ++L L
Sbjct: 121 IDPVTHSPRLDLLDLSSLLSALFNQPNFSAVATHASSLLNPDVLRL 166

[Close]

BLAST of CmaCh16G009730 vs. TAIR 10
Match: AT4G21440.1 (MYB-like 102 )

HSP 1 Score: 209.9 bits (533), Expect = 3.0e-54
Identity = 93/141 (65.96%), Postives = 113/141 (80.14%), Query Frame = 0


Query: 1   MGRIPCCEKENVKRGQWTPEEDNKLSSYIVQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60
           M R PCCEK  +K+G WT EED KL  YI +HG  NWR +PKNAGLQRCGKSCRLRWTNY
Sbjct: 1   MARSPCCEKNGLKKGPWTSEEDQKLVDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNY 60

Query: 61  LRPDLKHGQFSDMEEQTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMG 120
           LRPD+K G+FS  EE+TI++LHS +GN+WS IAA+LPGRTDN++KN WNT ++KKL  MG
Sbjct: 61  LRPDIKRGRFSFEEEETIIQLHSFLGNKWSAIAARLPGRTDNEIKNFWNTHIRKKLLRMG 120

Query: 121 IDPVTHKPFSHLMAEIATTLA 142
           IDPVTH P   L+ +I++ LA
Sbjct: 121 IDPVTHSPRLDLL-DISSILA 140

The following BLAST results are available for this feature:

BLAST of CmaCh16G009730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XQN1	9.2e-101	56.68	Transcription factor MYB80 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB80 PE=...	[more]
Q9XHV0	1.5e-98	59.94	Transcription factor MYB80 OS=Arabidopsis thaliana OX=3702 GN=MYB80 PE=1 SV=1	[more]
Q9LSI7	3.1e-56	71.11	Transcription factor MYB35 OS=Arabidopsis thaliana OX=3702 GN=MYB35 PE=1 SV=1	[more]
Q9M0J5	1.9e-53	57.83	Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB41 PE=1 SV=1	[more]
Q9M0Y5	1.9e-53	70.54	Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1	[more]

BLAST of CmaCh16G009730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56110.1	1.0e-99	59.94	myb domain protein 103	[more]
AT3G28470.1	2.2e-57	71.11	Duplicated homeodomain-like superfamily protein	[more]
AT4G05100.1	1.3e-54	70.54	myb domain protein 74	[more]
AT4G28110.1	1.3e-54	57.83	myb domain protein 41	[more]
AT4G21440.1	3.0e-54	65.96	MYB-like 102	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 275..295
None	No IPR available	GENE3D	1.10.10.60		coord: 68..128 e-value: 3.0E-19 score: 70.8
None	No IPR available	GENE3D	1.10.10.60		coord: 6..67 e-value: 8.3E-20 score: 72.4
None	No IPR available	PANTHER	PTHR47994:SF2	TRANSCRIPTION FACTOR MYB80	coord: 1..318
None	No IPR available	PANTHER	PTHR47994	F14D16.11-RELATED	coord: 1..318
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..63 e-value: 3.2E-13 score: 59.9 coord: 66..114 e-value: 3.2E-13 score: 59.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 62..112 score: 9.488739
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..61 score: 11.544133
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 70..112 e-value: 2.13339E-10 score: 53.3482
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 17..61 e-value: 4.16561E-12 score: 57.9706
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 68..110 e-value: 8.9E-12 score: 45.0 coord: 14..61 e-value: 1.1E-14 score: 54.4
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..65 score: 26.05851
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 66..116 score: 21.507191
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G009730.1	CmaCh16G009730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048658	anther wall tapetum development