CmaCh16G009470 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACCGAAACGAAAGATTCTGGCGCCGCCACGCACATAGTCGAAATCCCAGCAGAGAATCAGAACATTATGATCTCTGTAATAGAACAACACCCATTGAGACAAATCTCCGAAAGCTCCGGCCATTTATTGCTTTTAAAGCTCTGGCAACGAGAGGAGCATCTGTTCGGCCTACGAATCGGGCGGCGAGAGACCAAACTGGAGTCTCTAAAGCAACAGATCTTCCAACTCTGCTGCTACTTTTTCCTGTTCCATGCCCTGTCTCTGACTCTCTTGTTCACTTCGTCCGATCCCAATGTGTGCCACAAATGGTGGGTTCCGGGAGTGGCAATGGGGGCGACGTCGGGCGTGTTTGTGATCGTGGTGCAGCTGAAATTGTGGCTGTATTGGAAGGCATCAGCGCAGCTGCAAAGGGAGAAGAGTGAGAACAGAGCACTTACAAGGATTGTTCAAGAGCTGAGGATGAAAGGGTCGTGTTTTAATTTGTCCAAAGAGCCTCAAATTGGGCATAGGATGAAGAGCTCTAGTGTGGAGATTAAATGGGGGCCTCTTACTTGGTTGTCAAGGAATTTCGTCACCATTTTTCTTCTGTGCTTTTCTGGCATTGTTTTTGGTGCTTCCAAGTTCATACTCTGTGGCCTTTAA ATGGCGACCGAAACGAAAGATTCTGGCGCCGCCACGCACATAGTCGAAATCCCAGCAGAGAATCAGAACATTATGATCTCTGTAATAGAACAACACCCATTGAGACAAATCTCCGAAAGCTCCGGCCATTTATTGCTTTTAAAGCTCTGGCAACGAGAGGAGCATCTGTTCGGCCTACGAATCGGGCGGCGAGAGACCAAACTGGAGTCTCTAAAGCAACAGATCTTCCAACTCTGCTGCTACTTTTTCCTGTTCCATGCCCTGTCTCTGACTCTCTTGTTCACTTCGTCCGATCCCAATGTGTGCCACAAATGGTGGGTTCCGGGAGTGGCAATGGGGGCGACGTCGGGCGTGTTTGTGATCGTGGTGCAGCTGAAATTGTGGCTGTATTGGAAGGCATCAGCGCAGCTGCAAAGGGAGAAGAGTGAGAACAGAGCACTTACAAGGATTGTTCAAGAGCTGAGGATGAAAGGGTCGTGTTTTAATTTGTCCAAAGAGCCTCAAATTGGGCATAGGATGAAGAGCTCTAGTGTGGAGATTAAATGGGGGCCTCTTACTTGGTTGTCAAGGAATTTCGTCACCATTTTTCTTCTGTGCTTTTCTGGCATTGTTTTTGGTGCTTCCAAGTTCATACTCTGTGGCCTTTAA ATGGCGACCGAAACGAAAGATTCTGGCGCCGCCACGCACATAGTCGAAATCCCAGCAGAGAATCAGAACATTATGATCTCTGTAATAGAACAACACCCATTGAGACAAATCTCCGAAAGCTCCGGCCATTTATTGCTTTTAAAGCTCTGGCAACGAGAGGAGCATCTGTTCGGCCTACGAATCGGGCGGCGAGAGACCAAACTGGAGTCTCTAAAGCAACAGATCTTCCAACTCTGCTGCTACTTTTTCCTGTTCCATGCCCTGTCTCTGACTCTCTTGTTCACTTCGTCCGATCCCAATGTGTGCCACAAATGGTGGGTTCCGGGAGTGGCAATGGGGGCGACGTCGGGCGTGTTTGTGATCGTGGTGCAGCTGAAATTGTGGCTGTATTGGAAGGCATCAGCGCAGCTGCAAAGGGAGAAGAGTGAGAACAGAGCACTTACAAGGATTGTTCAAGAGCTGAGGATGAAAGGGTCGTGTTTTAATTTGTCCAAAGAGCCTCAAATTGGGCATAGGATGAAGAGCTCTAGTGTGGAGATTAAATGGGGGCCTCTTACTTGGTTGTCAAGGAATTTCGTCACCATTTTTCTTCTGTGCTTTTCTGGCATTGTTTTTGGTGCTTCCAAGTTCATACTCTGTGGCCTTTAA MATETKDSGAATHIVEIPAENQNIMISVIEQHPLRQISESSGHLLLLKLWQREEHLFGLRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGATSGVFVIVVQLKLWLYWKASAQLQREKSENRALTRIVQELRMKGSCFNLSKEPQIGHRMKSSSVEIKWGPLTWLSRNFVTIFLLCFSGIVFGASKFILCGL Homology
BLAST of CmaCh16G009470 vs. TAIR 10
Match: AT5G56120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12870.1); Has 77 Blast hits to 75 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 228.0 bits (580), Expect = 7.1e-60 Identity = 121/236 (51.27%), Postives = 157/236 (66.53%), Query Frame = 0
BLAST of CmaCh16G009470 vs. TAIR 10
Match: AT3G12870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56120.1); Has 70 Blast hits to 70 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 113.2 bits (282), Expect = 2.5e-25 Identity = 69/191 (36.13%), Postives = 110/191 (57.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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