CmaCh16G009370 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G009370
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Pirin-like protein
Location	Cma_Chr16: 7193013 .. 7196701 (+)
RNA-Seq Expression	CmaCh16G009370
Synteny	CmaCh16G009370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGCTCCAGCAGATAGCCCCAATACAGATGGAATTCACATTTTCGAGTCAAGTGGTATCAATATTATGCATTCAGTGATTGGCACTAGAGACGATTGCATCTCTCTAGGCCCTGGAAGTAAATTCATCAACATAACAGACGTCGAGTGTGGTCCAAGTCATGGAATTAGCATCAGTAGCCTCGAAAAGTACCCAAATGAAGATGTCTCTGAAGTCGCAATAAGAGACCCTACATTTGTTGGCATAGACAACGGTGTGAGGAACAAAACATGGTCAACTTCATTTTCTAGTTCTGTTAGTAAGATCGCTTTTCTCAATCTCGAAATGAAGGAGGTAAAAAATCCTGTAACGACCCTAAATTTCCACATACTCAGAGTCGCTATTAACGTCTCTTGCTCATCTACAACTTGCACGAAAAGCAAAAAAAAAAAAAAAAGATCAAATAAATAATAATGGGTTCGCATAAGATAAAACCCTAATGGGTAAACTTCTCACCCACGTTATAACTATTTCTAATAGAGACACATTCAACATAGGATAGCCTACTCATAATAAAAGACAAATGAAGATAACGAACAAAGGAAATCGTAACCCTATTTCGAACATATTTTGAAGATAGGTTTTATTATGAAGTTAGAAATAATTATGGAATACTTATACGTCATTTCCACCTAATACATTGTGAAAATAGAACCCACACCCCTAATATTACCTAATGGGTTTAGTTTCCATTTTGCATGAAACGACATGTCGCACAAGACAGCGAAAGGAGAAGAAAAAAATGGAAACTGTCACCGACATCATCATTTCTAATCGTCTCATCGTAATCAAGAAAACATACCATATATAATAAAATATTAAAAAAAGAAAAATTGTCGGACGGCTATGAAAGTCGACACGTCGTTAAGTGACAGTTATTTTTCAATTATTTAATATGGTTTGACGTTTTTTATTCGCTTTCTGTATTTATTTAACGGCTTCTGTTGCATCATGCTTGCACATGACTGATGCAATAATGGGCCCAGGCCCAGGCCCACGAATCTTGTGATCCATAACCTCAGTTCCACTGGCCCACTAATTCATTGATGTTTGCATACAAAAAAAAAAAATCTTTATTCATTTAAGTTAAAAAAATCATAACCTAACCCAACCATTTCTTTTTAGGTTAGATTGAGTTGGGTTGGTCCGAGAGGATGATCAGCCACACTGGGATTGAGACACGGCCCAGACTCCTACGAGAGGTAGCATTATTAAAAATCCTATTTAATGGGCGAACAGCTCAACCCTTGGAACATACTACAACCCCAGGTGGCAAACAGCCAACATCAAGGTGTCAAACCTTCCCGTCAATGTGAGCTCTTGGAAAAGATCAACCTGTTATCCCTAGAGTAACTTTTATCCGTTGAGTGACAGCTCTTCTACTCGGCACCGTTGGATCACTAAGGCCAACTTTCGCCCCTATTCGACGAGTGGGTTTTGCAGTCAAGCTCCCTCTTGTCTTTATTTATGATACATGCTATATTAATAACTAAAACCTCATATAACTCAAATATTAAATGTTTATAATGCACAATCATCACTAACATCAGTTGCAAAAGTCAAATATTTTTAATCTTCGTAATAATTAAATCTAGTGTGAGGTTGGGTTGAATTGTGATCCTATTTTTCTTTCAATAATTTTGTTTATTTATATTTAAAAATAAATATAATAATTTTAAATAATAATTTTATATTCATAAACATATTTAAATTAAATTATATAAAATTTCCAAACAATGTCTTTTTAAATAAATAAAAAGAAAAAAAAAAGTTACCAAACATGTTTCCTTTTTCAAGAAAAAAACAAAAATAAAATATTATCCATTACACATTTTAAAAAATGCATAAAAAGGGAATATTGATCCTCTAAAATATTTTATTATATTATAATAATAATTAATATTATTTAAATATTGTGTTTGGTAAGTTGTTTGAAGTAGGCAATTTCAAGGAGCGATGGTGATTGGTAGAAATTGAACGGCGGAGATTCAAAGTTGAAAGTCATAGACGGTCGATGTAATCCCACCGTCACGCTGACATGGCTGTTTTGTTCTCCCTCCTCCTCAAGCAATCTCTCTCTTCCTTTGACCTCTCCTCTCTCTGTAATAAACAAATCTTCCATTTCTCTCTCCTCTCTCTATAAATACATATCCCATTTCAACTCCAAACACCCACAAATTTCATATCAAATATGTCTCAGCTTTGTGTCGCACTCAAACACCCTCGTCTTGTTGATCGAACGTTCCTTGCTCGACCTCAACATGAAGGCTTTGGTGCTGTCGTCAGAAGAAGCATCGGCAGGTAAAAACGATTCAACTGATATTAGTGATTGGGTTGTGAGCTCTATTTGAGTAGTTCGAGTCACCCATTCAATTAACCTAATCTTTTTTTTTTTTTTTTCAGGTATGAACTCAAATACTTTGATCCATTCCTAGTTTTGGACGAGTTCTTTGGTACCCACTTCTCAAAATCTTTCGATTTTTATTGATTTATTTGTTCTTAAGAGGAGGAAATTAAAATATATTATTGCAGTGACTGCGCCTGCTGGTTTTCCTGATCATCCACATCGAGGATTTGAAACTGTCACCTACATGCTGCAGGTATTCATACTGTAATGTTGGAAGGTCTTGATCTTATTCTCCTCGTTAGAAATTACGACTCTCTAGTATGATATTGTCTACTTTGAGGTTTGGTTTCTTCAAAAAGTCTCGTACTAATGAAGATAGTATTTCTTATTTATAAACTCATGATCAATCTCTTAATTACCCGAAACATTTGTTTTGGAATTTGATTCAAGGGAGCCATGACCCACGAAGATTTTCAAGGCCATAAAGGAACAATTGGAGCTGGGGACTTGCAATGGATGACTGCTGGCAAAGGCATTGTCCACTCTGAAATGCCTGCCTCCCATGGCACACAACATGGCTTACAACTTTGGATCAATCTATCCTCCAAACACAAAATGTAACTTTAAATCCTTCCATTTCAATATGTTAAATTTTTATAATAACCGTGTTTTCATCGACAGGATAGAGCCGAGGTATCAAGAAGTACATAACAACGACGTAGTGGAAGCTAAAAAAGACGGAGTAAAAGTGAGAGTGATAGCGGGAGAAGCCATGGGAGCACGATCCCCAATTTACACCAAGACTCTGACCATGTACTTGGATTTCACACTCGACCCAGGATCTCACATTGAGCAGTCGATCCCGATGGGGTGGAATGCGTTCGTGTACGTGCTAGAAGGTGAGGACGGAGTGTTCGGGAGCATGAAATCGATGCCGATTGCATCACATCACATTGTTTTGTTAGGGAATGGGGATGGATTGGAGGCTTGGAACAAGTCTTCCTCCGAAGTCCTGAGGTTTATATTGGTTGGGGGTGAGCCATTGAATGAGAGTGTTGTGCAGATGGGGCCATTTGTGATGAACACTGAAGAAGAGATTGACCAAACCATTGAGGATTTTGAGAATTGTACCAATGGGTTTGAGAGAGCAAAGCATTGGAGTTCACAAGCTTAAGATGTTTGCTTGCCTCTTCTTTTGCCATTAATATTTAAACCACATTATTATACCTTTGTTATTTTAGATTCATATAATAAATATGTAACTCTTCACCCAAATCCGATCTTAAATAGTTAATTTCAC

mRNA sequence

ATGATAGCTCCAGCAGATAGCCCCAATACAGATGGAATTCACATTTTCGAGTCAAGTGGTATCAATATTATGCATTCAGTGATTGGCACTAGAGACGATTGCATCTCTCTAGGCCCTGGAAGTAAATTCATCAACATAACAGACGTCGAGTGTGGTCCAAGTCATGGAATTAGCATCAGTAGCCTCGAAAAGTACCCAAATGAAGATGTCTCTGAAGTCGCAATAAGAGACCCTACATTTGTTGGCATAGACAACGGTGTGAGGAACAAAACATGGTCAACTTCATTTTCTAGTTCTGTTAGTAAGATCGCTTTTCTCAATCTCGAAATGAAGGAGCTTTGTGTCGCACTCAAACACCCTCGTCTTGTTGATCGAACGTTCCTTGCTCGACCTCAACATGAAGGCTTTGGTGCTGTCGTCAGAAGAAGCATCGGCAGGTATGAACTCAAATACTTTGATCCATTCCTAGTTTTGGACGAGTTCTTTGTGACTGCGCCTGCTGGTTTTCCTGATCATCCACATCGAGGATTTGAAACTGTCACCTACATGCTGCAGGGAGCCATGACCCACGAAGATTTTCAAGGCCATAAAGGAACAATTGGAGCTGGGGACTTGCAATGGATGACTGCTGGCAAAGGCATTGTCCACTCTGAAATGCCTGCCTCCCATGGCACACAACATGGCTTACAACTTTGGATCAATCTATCCTCCAAACACAAAATGATAGAGCCGAGGTATCAAGAAGTACATAACAACGACGTAGTGGAAGCTAAAAAAGACGGAGTAAAAGTGAGAGTGATAGCGGGAGAAGCCATGGGAGCACGATCCCCAATTTACACCAAGACTCTGACCATGTACTTGGATTTCACACTCGACCCAGGATCTCACATTGAGCAGTCGATCCCGATGGGGTGGAATGCGTTCGTGTACGTGCTAGAAGGTGAGGACGGAGTGTTCGGGAGCATGAAATCGATGCCGATTGCATCACATCACATTGTTTTGTTAGGGAATGGGGATGGATTGGAGGCTTGGAACAAGTCTTCCTCCGAAGTCCTGAGGTTTATATTGGTTGGGGGTGAGCCATTGAATGAGAGTGTTGTGCAGATGGGGCCATTTGTGATGAACACTGAAGAAGAGATTGACCAAACCATTGAGGATTTTGAGAATTGTACCAATGGGTTTGAGAGAGCAAAGCATTGGAGTTCACAAGCTTAAGATGTTTGCTTGCCTCTTCTTTTGCCATTAATATTTAAACCACATTATTATACCTTTGTTATTTTAGATTCATATAATAAATATGTAACTCTTCACCCAAATCCGATCTTAAATAGTTAATTTCAC

Coding sequence (CDS)

ATGATAGCTCCAGCAGATAGCCCCAATACAGATGGAATTCACATTTTCGAGTCAAGTGGTATCAATATTATGCATTCAGTGATTGGCACTAGAGACGATTGCATCTCTCTAGGCCCTGGAAGTAAATTCATCAACATAACAGACGTCGAGTGTGGTCCAAGTCATGGAATTAGCATCAGTAGCCTCGAAAAGTACCCAAATGAAGATGTCTCTGAAGTCGCAATAAGAGACCCTACATTTGTTGGCATAGACAACGGTGTGAGGAACAAAACATGGTCAACTTCATTTTCTAGTTCTGTTAGTAAGATCGCTTTTCTCAATCTCGAAATGAAGGAGCTTTGTGTCGCACTCAAACACCCTCGTCTTGTTGATCGAACGTTCCTTGCTCGACCTCAACATGAAGGCTTTGGTGCTGTCGTCAGAAGAAGCATCGGCAGGTATGAACTCAAATACTTTGATCCATTCCTAGTTTTGGACGAGTTCTTTGTGACTGCGCCTGCTGGTTTTCCTGATCATCCACATCGAGGATTTGAAACTGTCACCTACATGCTGCAGGGAGCCATGACCCACGAAGATTTTCAAGGCCATAAAGGAACAATTGGAGCTGGGGACTTGCAATGGATGACTGCTGGCAAAGGCATTGTCCACTCTGAAATGCCTGCCTCCCATGGCACACAACATGGCTTACAACTTTGGATCAATCTATCCTCCAAACACAAAATGATAGAGCCGAGGTATCAAGAAGTACATAACAACGACGTAGTGGAAGCTAAAAAAGACGGAGTAAAAGTGAGAGTGATAGCGGGAGAAGCCATGGGAGCACGATCCCCAATTTACACCAAGACTCTGACCATGTACTTGGATTTCACACTCGACCCAGGATCTCACATTGAGCAGTCGATCCCGATGGGGTGGAATGCGTTCGTGTACGTGCTAGAAGGTGAGGACGGAGTGTTCGGGAGCATGAAATCGATGCCGATTGCATCACATCACATTGTTTTGTTAGGGAATGGGGATGGATTGGAGGCTTGGAACAAGTCTTCCTCCGAAGTCCTGAGGTTTATATTGGTTGGGGGTGAGCCATTGAATGAGAGTGTTGTGCAGATGGGGCCATTTGTGATGAACACTGAAGAAGAGATTGACCAAACCATTGAGGATTTTGAGAATTGTACCAATGGGTTTGAGAGAGCAAAGCATTGGAGTTCACAAGCTTAA

Protein sequence

MIAPADSPNTDGIHIFESSGINIMHSVIGTRDDCISLGPGSKFINITDVECGPSHGISISSLEKYPNEDVSEVAIRDPTFVGIDNGVRNKTWSTSFSSSVSKIAFLNLEMKELCVALKHPRLVDRTFLARPQHEGFGAVVRRSIGRYELKYFDPFLVLDEFFVTAPAGFPDHPHRGFETVTYMLQGAMTHEDFQGHKGTIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKHKMIEPRYQEVHNNDVVEAKKDGVKVRVIAGEAMGARSPIYTKTLTMYLDFTLDPGSHIEQSIPMGWNAFVYVLEGEDGVFGSMKSMPIASHHIVLLGNGDGLEAWNKSSSEVLRFILVGGEPLNESVVQMGPFVMNTEEEIDQTIEDFENCTNGFERAKHWSSQA

Homology

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BLAST of CmaCh16G009370 vs. ExPASy Swiss-Prot
Match: Q9LPS9 (Pirin-like protein At1g50590 OS=Arabidopsis thaliana OX=3702 GN=At1g50590 PE=2 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 3.4e-108
Identity = 196/292 (67.12%), Postives = 229/292 (78.42%), Query Frame = 0


Query: 121 RLVDRTFLARPQHEGFGAVVRRSIGRYELKYFDPFLVLDEFFVTAPAGFPDHPHRGFETV 180
           RLV +   AR  HEGFGAVVRRSIGR+E +YFDPFLVLDEF V+APAGFPDHPHRGFETV
Sbjct: 13  RLVVKKLFARQLHEGFGAVVRRSIGRFEFRYFDPFLVLDEFSVSAPAGFPDHPHRGFETV 72

Query: 181 TYMLQGAMTHEDFQGHKGTIGAGDLQWMTAGKGIVHSEMPA--SHGTQH--GLQLWINLS 240
           TYML+G + HED +GHKG I  G LQWMTAGKGIVHSEMP+  S+G  H  GLQLWINLS
Sbjct: 73  TYMLEGEILHEDCEGHKGVIREGGLQWMTAGKGIVHSEMPSSNSNGITHNKGLQLWINLS 132

Query: 241 SKHKMIEPRYQEVHNNDVVEAKKDGVKVRVIAGEAMGARSPIYTKTLTMYLDFTLDPGSH 300
           S+ K++EP YQE+ + D+ E +KDGV+VRVIAGE  G +S I T+T TMYLDFTL PGS 
Sbjct: 133 SRQKLVEPSYQEIESKDIAETEKDGVRVRVIAGEWNGVKSKICTRTPTMYLDFTLSPGSR 192

Query: 301 IEQSIPMGWNAFVYVLEGEDGVFGSMK--SMPIASHHIVLLG-NGDGLEAWNKSSSEV-L 360
           I Q IP+ WNAFVYVL+G  G FG  K      A+HH+++LG  GD LEAWN S S + L
Sbjct: 193 ISQPIPLHWNAFVYVLQGH-GHFGDSKLQHSAAAAHHLLVLGLGGDMLEAWNGSDSGLPL 252

Query: 361 RFILVGGEPLNESVVQMGPFVMNTEEEIDQTIEDFENCTNGFERAKHWSSQA 405
           RFILV GEP+ E +VQ GPFVMNT+EEID+TI+DFEN  NGFE+A+HW SQA
Sbjct: 253 RFILVAGEPIGEPMVQFGPFVMNTQEEIDETIDDFENFRNGFEKARHWKSQA 303

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BLAST of CmaCh16G009370 vs. ExPASy Swiss-Prot
Match: Q9SEE4 (Pirin-like protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.3e-107
Identity = 186/284 (65.49%), Postives = 226/284 (79.58%), Query Frame = 0


Query: 120 PRLVDRTFLARPQHEGFGAVVRRSIGRYELKYFDPFLVLDEFFVTAPAGFPDHPHRGFET 179
           PRLV +  LAR Q+EG GA+VRRSIGR EL+  DPFL+LDEF V+ PAGFPDHPHRGFET
Sbjct: 10  PRLVVKKVLARAQNEGDGAIVRRSIGRPELQNLDPFLMLDEFSVSQPAGFPDHPHRGFET 69

Query: 180 VTYMLQGAMTHEDFQGHKGTIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKH 239
           VTYMLQGA TH+DF GHKGTI  GD+QWMTAG+GIVHSEMPA  GTQ GLQLWINLSSK 
Sbjct: 70  VTYMLQGAFTHQDFAGHKGTIRTGDVQWMTAGRGIVHSEMPAGPGTQKGLQLWINLSSKD 129

Query: 240 KMIEPRYQEVHNNDVVEAKKDGVKVRVIAGEAMGARSPIYTKTLTMYLDFTLDPGSHIEQ 299
           KMIEPRYQE+ + D+ +A+KDGV V ++AGE+MG +S ++T+T TMYLDFTL PGS   Q
Sbjct: 130 KMIEPRYQELLHQDIPKAEKDGVSVTILAGESMGKKSQVFTRTPTMYLDFTLKPGSEHHQ 189

Query: 300 SIPMGWNAFVYVLEGEDGVFGSMKSMPIASHHIVLLGNGDGLEAWNKSSSEVLRFILVGG 359
            IP  WNAF+Y++EGE G FGS  S    +HH ++LG G+GL  WNK SS+ LRF+L+GG
Sbjct: 190 PIPETWNAFLYIVEGE-GAFGSSDSTTTPAHHCLVLGPGEGLSVWNK-SSKPLRFVLIGG 249

Query: 360 EPLNESVVQMGPFVMNTEEEIDQTIEDFENCTNGFERAKHWSSQ 404
           +P+NE VVQ GPFVMNT+ EI Q  +D++   NGFER++ W S+
Sbjct: 250 QPINEPVVQYGPFVMNTKSEIMQAYQDYQLGKNGFERSRQWYSK 291

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BLAST of CmaCh16G009370 vs. ExPASy Swiss-Prot
Match: Q9ZW82 (Pirin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PRN2 PE=1 SV=3)

HSP 1 Score: 372.5 bits (955), Expect = 6.2e-102
Identity = 177/286 (61.89%), Postives = 220/286 (76.92%), Query Frame = 0


Query: 121 RLVDRTFLARPQHEGFGAVVRRSIGRYELKYFDPFLVLDEFFVTAPAGFPDHPHRGFETV 180
           R V +   A+ Q EG GAVVRR I R E K  DPFL+LDEF V+ PAGFPDHPHRGFETV
Sbjct: 37  RPVIKKVFAKLQKEGDGAVVRRGISRSEQKLLDPFLMLDEFSVSPPAGFPDHPHRGFETV 96

Query: 181 TYMLQGAMTHEDFQGHKGTIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKHK 240
           TY+L+G +TH+DF+GHKGTI AGD+QWMTAG+GI+HSEMP       GLQLWINLSS  K
Sbjct: 97  TYVLEGGITHQDFKGHKGTIYAGDVQWMTAGRGIIHSEMPEEE-VNKGLQLWINLSSNEK 156

Query: 241 MIEPRYQEVHNNDVVEAKKDGVKVRVIAGEAMGARSPIYTKTLTMYLDFTLDPGSHIEQS 300
           MIEP YQE+ ++D+ +A+++GV+V+VIAGE+MG +SP+YT+T TM+LDFTL PG+ I Q+
Sbjct: 157 MIEPNYQELSHSDIPKAEQNGVEVKVIAGESMGIQSPVYTRTPTMFLDFTLQPGAQIHQN 216

Query: 301 IPMGWNAFVYVLEGED--GVFGSMKSMPIASHHIVLLGNG-DGLEAWNKSSSEVLRFILV 360
           +P  WNAF Y+LE  +  GVF S  S PI +H +V+ G G DG+  WNKSSS+ LRF+L+
Sbjct: 217 VPESWNAFAYILESGEGGGVFSSSNSSPIPAHSVVVFGPGNDGVSVWNKSSSKQLRFVLI 276

Query: 361 GGEPLNESVVQMGPFVMNTEEEIDQTIEDFENCTNGFERAKHWSSQ 404
            GEP+ E VVQ GPFVMNT+ EID TIED+    NGFE AK+W SQ
Sbjct: 277 AGEPIGEPVVQYGPFVMNTQAEIDMTIEDYHYGKNGFEMAKYWRSQ 321

[Close]

BLAST of CmaCh16G009370 vs. ExPASy Swiss-Prot
Match: Q9LX49 (Pirin-1 OS=Arabidopsis thaliana OX=3702 GN=PRN1 PE=1 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 9.5e-95
Identity = 157/279 (56.27%), Postives = 211/279 (75.63%), Query Frame = 0


Query: 120 PRLVDRTFLARPQHEGFGAVVRRSIGRYELKYFDPFLVLDEFFVTAPAGFPDHPHRGFET 179
           PR+V +  LA+ + EG GAVVR  I + + K  DPF++L EF  +  AGFPDHPHRGFE+
Sbjct: 9   PRIVIKKVLAKLEKEGEGAVVRNGITKIDQKLLDPFVLLVEFSFSLSAGFPDHPHRGFES 68

Query: 180 VTYMLQGAMTHEDFQGHKGTIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKH 239
           VTYMLQG + H+D +GHKGTI AGD+QWMTAG+GI+HSE P      +GLQLWINL S  
Sbjct: 69  VTYMLQGGIIHKDPKGHKGTIQAGDVQWMTAGRGIIHSEFPEEE-VNNGLQLWINLPSTE 128

Query: 240 KMIEPRYQEVHNNDVVEAKKDGVKVRVIAGEAMGARSPIYTKTLTMYLDFTLDPGSHIEQ 299
           KM EP+Y+E+ + D+  A+++GV+V+VIAG++MG +SP+YT+T TM+LDFTL PGS   Q
Sbjct: 129 KMTEPKYKELSSLDIPRAEENGVEVKVIAGDSMGIKSPVYTRTPTMFLDFTLKPGSQTHQ 188

Query: 300 SIPMGWNAFVYVLEGEDGVFGSMKSMPIASHHIVLLGNGDGLEAWNKSSSEVLRFILVGG 359
           ++P  W AF Y++EG++GVFGS+ S  I++HH+V+ G GD +  WNKS+S  LRF+L+ G
Sbjct: 189 TVPESWTAFAYIIEGDEGVFGSLNSSAISAHHVVVFGPGDLVSVWNKSTSRSLRFLLIAG 248

Query: 360 EPLNESVVQMGPFVMNTEEEIDQTIEDFENCTNGFERAK 399
           EP+ E VVQ GPFVMN++ EID   +D++N  NGFE AK
Sbjct: 249 EPIGEPVVQCGPFVMNSQAEIDMAFDDYQNAKNGFEMAK 286

[Close]

BLAST of CmaCh16G009370 vs. ExPASy Swiss-Prot
Match: O00625 (Pirin OS=Homo sapiens OX=9606 GN=PIR PE=1 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 7.8e-89
Identity = 156/282 (55.32%), Postives = 194/282 (68.79%), Query Frame = 0


Query: 123 VDRTFLARPQHEGFGAVVRRSIGRYELKYFDPFLVLDEFFVTAPAGFPDHPHRGFETVTY 182
           V  + L+R Q EG GA VRRSIGR ELK  DPFL+ DEF    P GFPDHPHRGFETV+Y
Sbjct: 7   VTLSVLSREQSEGVGARVRRSIGRPELKNLDPFLLFDEFKGGRPGGFPDHPHRGFETVSY 66

Query: 183 MLQ-GAMTHEDFQGHKGTIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKHKM 242
           +L+ G+M HEDF GH G +  GDLQWMTAG+GI+H+EMP S    HGLQLW+NL S  KM
Sbjct: 67  LLEGGSMAHEDFCGHTGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLWVNLRSSEKM 126

Query: 243 IEPRYQEVHNNDVVEAKKDGVKVRVIAGEAMGARSPIYTKTLTMYLDFTLDPGSHIEQSI 302
           +EP+YQE+ + ++ +  KDGV V VI+GEA+G +S +YT+T T+YLDF LDPG+   Q I
Sbjct: 127 VEPQYQELKSEEIPKPSKDGVTVAVISGEALGIKSKVYTRTPTLYLDFKLDPGAKHSQPI 186

Query: 303 PMGWNAFVYVLEGEDGVFGSMKSMPIASHHIVLLGNGDGLEAWNKSSSEVLRFILVGGEP 362
           P GW +F+Y + G+  +        I  HH  +LG GD ++  NK       F+L+ GEP
Sbjct: 187 PKGWTSFIYTISGDVYIGPDDAQQKIEPHHTAVLGEGDSVQVENKDPKR-SHFVLIAGEP 246

Query: 363 LNESVVQMGPFVMNTEEEIDQTIEDFENCTNGFERAKHWSSQ 404
           L E V+Q GPFVMNT EEI Q I DF N  NGFERAK W S+
Sbjct: 247 LREPVIQHGPFVMNTNEEISQAILDFRNAKNGFERAKTWKSK 287

[Close]

BLAST of CmaCh16G009370 vs. TAIR 10
Match: AT1G50590.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 393.3 bits (1009), Expect = 2.4e-109
Identity = 196/292 (67.12%), Postives = 229/292 (78.42%), Query Frame = 0


Query: 121 RLVDRTFLARPQHEGFGAVVRRSIGRYELKYFDPFLVLDEFFVTAPAGFPDHPHRGFETV 180
           RLV +   AR  HEGFGAVVRRSIGR+E +YFDPFLVLDEF V+APAGFPDHPHRGFETV
Sbjct: 13  RLVVKKLFARQLHEGFGAVVRRSIGRFEFRYFDPFLVLDEFSVSAPAGFPDHPHRGFETV 72

Query: 181 TYMLQGAMTHEDFQGHKGTIGAGDLQWMTAGKGIVHSEMPA--SHGTQH--GLQLWINLS 240
           TYML+G + HED +GHKG I  G LQWMTAGKGIVHSEMP+  S+G  H  GLQLWINLS
Sbjct: 73  TYMLEGEILHEDCEGHKGVIREGGLQWMTAGKGIVHSEMPSSNSNGITHNKGLQLWINLS 132

Query: 241 SKHKMIEPRYQEVHNNDVVEAKKDGVKVRVIAGEAMGARSPIYTKTLTMYLDFTLDPGSH 300
           S+ K++EP YQE+ + D+ E +KDGV+VRVIAGE  G +S I T+T TMYLDFTL PGS 
Sbjct: 133 SRQKLVEPSYQEIESKDIAETEKDGVRVRVIAGEWNGVKSKICTRTPTMYLDFTLSPGSR 192

Query: 301 IEQSIPMGWNAFVYVLEGEDGVFGSMK--SMPIASHHIVLLG-NGDGLEAWNKSSSEV-L 360
           I Q IP+ WNAFVYVL+G  G FG  K      A+HH+++LG  GD LEAWN S S + L
Sbjct: 193 ISQPIPLHWNAFVYVLQGH-GHFGDSKLQHSAAAAHHLLVLGLGGDMLEAWNGSDSGLPL 252

Query: 361 RFILVGGEPLNESVVQMGPFVMNTEEEIDQTIEDFENCTNGFERAKHWSSQA 405
           RFILV GEP+ E +VQ GPFVMNT+EEID+TI+DFEN  NGFE+A+HW SQA
Sbjct: 253 RFILVAGEPIGEPMVQFGPFVMNTQEEIDETIDDFENFRNGFEKARHWKSQA 303

[Close]

BLAST of CmaCh16G009370 vs. TAIR 10
Match: AT2G43120.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 372.5 bits (955), Expect = 4.4e-103
Identity = 177/286 (61.89%), Postives = 220/286 (76.92%), Query Frame = 0


Query: 121 RLVDRTFLARPQHEGFGAVVRRSIGRYELKYFDPFLVLDEFFVTAPAGFPDHPHRGFETV 180
           R V +   A+ Q EG GAVVRR I R E K  DPFL+LDEF V+ PAGFPDHPHRGFETV
Sbjct: 37  RPVIKKVFAKLQKEGDGAVVRRGISRSEQKLLDPFLMLDEFSVSPPAGFPDHPHRGFETV 96

Query: 181 TYMLQGAMTHEDFQGHKGTIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKHK 240
           TY+L+G +TH+DF+GHKGTI AGD+QWMTAG+GI+HSEMP       GLQLWINLSS  K
Sbjct: 97  TYVLEGGITHQDFKGHKGTIYAGDVQWMTAGRGIIHSEMPEEE-VNKGLQLWINLSSNEK 156

Query: 241 MIEPRYQEVHNNDVVEAKKDGVKVRVIAGEAMGARSPIYTKTLTMYLDFTLDPGSHIEQS 300
           MIEP YQE+ ++D+ +A+++GV+V+VIAGE+MG +SP+YT+T TM+LDFTL PG+ I Q+
Sbjct: 157 MIEPNYQELSHSDIPKAEQNGVEVKVIAGESMGIQSPVYTRTPTMFLDFTLQPGAQIHQN 216

Query: 301 IPMGWNAFVYVLEGED--GVFGSMKSMPIASHHIVLLGNG-DGLEAWNKSSSEVLRFILV 360
           +P  WNAF Y+LE  +  GVF S  S PI +H +V+ G G DG+  WNKSSS+ LRF+L+
Sbjct: 217 VPESWNAFAYILESGEGGGVFSSSNSSPIPAHSVVVFGPGNDGVSVWNKSSSKQLRFVLI 276

Query: 361 GGEPLNESVVQMGPFVMNTEEEIDQTIEDFENCTNGFERAKHWSSQ 404
            GEP+ E VVQ GPFVMNT+ EID TIED+    NGFE AK+W SQ
Sbjct: 277 AGEPIGEPVVQYGPFVMNTQAEIDMTIEDYHYGKNGFEMAKYWRSQ 321

[Close]

BLAST of CmaCh16G009370 vs. TAIR 10
Match: AT3G59220.1 (pirin )

HSP 1 Score: 348.6 bits (893), Expect = 6.8e-96
Identity = 157/279 (56.27%), Postives = 211/279 (75.63%), Query Frame = 0


Query: 120 PRLVDRTFLARPQHEGFGAVVRRSIGRYELKYFDPFLVLDEFFVTAPAGFPDHPHRGFET 179
           PR+V +  LA+ + EG GAVVR  I + + K  DPF++L EF  +  AGFPDHPHRGFE+
Sbjct: 9   PRIVIKKVLAKLEKEGEGAVVRNGITKIDQKLLDPFVLLVEFSFSLSAGFPDHPHRGFES 68

Query: 180 VTYMLQGAMTHEDFQGHKGTIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKH 239
           VTYMLQG + H+D +GHKGTI AGD+QWMTAG+GI+HSE P      +GLQLWINL S  
Sbjct: 69  VTYMLQGGIIHKDPKGHKGTIQAGDVQWMTAGRGIIHSEFPEEE-VNNGLQLWINLPSTE 128

Query: 240 KMIEPRYQEVHNNDVVEAKKDGVKVRVIAGEAMGARSPIYTKTLTMYLDFTLDPGSHIEQ 299
           KM EP+Y+E+ + D+  A+++GV+V+VIAG++MG +SP+YT+T TM+LDFTL PGS   Q
Sbjct: 129 KMTEPKYKELSSLDIPRAEENGVEVKVIAGDSMGIKSPVYTRTPTMFLDFTLKPGSQTHQ 188

Query: 300 SIPMGWNAFVYVLEGEDGVFGSMKSMPIASHHIVLLGNGDGLEAWNKSSSEVLRFILVGG 359
           ++P  W AF Y++EG++GVFGS+ S  I++HH+V+ G GD +  WNKS+S  LRF+L+ G
Sbjct: 189 TVPESWTAFAYIIEGDEGVFGSLNSSAISAHHVVVFGPGDLVSVWNKSTSRSLRFLLIAG 248

Query: 360 EPLNESVVQMGPFVMNTEEEIDQTIEDFENCTNGFERAK 399
           EP+ E VVQ GPFVMN++ EID   +D++N  NGFE AK
Sbjct: 249 EPIGEPVVQCGPFVMNSQAEIDMAFDDYQNAKNGFEMAK 286

[Close]

BLAST of CmaCh16G009370 vs. TAIR 10
Match: AT3G59260.1 (pirin, putative )

HSP 1 Score: 310.5 bits (794), Expect = 2.0e-84
Identity = 141/263 (53.61%), Postives = 188/263 (71.48%), Query Frame = 0


Query: 141 RRSIGRYELKYFDPFLVLDEFFVTAPAGFPDHPHRGFETVTYMLQGAMTHEDFQGHKGTI 200
           + S  + + +  DPF+ L EF V+ P GF DHPHRGFE+VTYM QG + H+D  G+KGTI
Sbjct: 10  KASPSKSDHELLDPFVSLVEFSVSPPGGFKDHPHRGFESVTYMFQGGIIHQDCNGNKGTI 69

Query: 201 GAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKHKMIEPRYQEVHNNDVVEAKKD 260
             GD+QWMTAG+GI+HSEMP       GLQLWINL S  KMIEP+  E+ ++++  A   
Sbjct: 70  HEGDVQWMTAGRGIIHSEMPEEQ-VNKGLQLWINLPSSAKMIEPKNIEISSSEIPSADDY 129

Query: 261 GVKVRVIAGEAMGARSPIYTKTLTMYLDFTLDPGSHIEQSIPMGWNAFVYVLEGEDGVFG 320
           GV+V+VIAGE+MG +SP YTKT  M+LDFTLDP +   Q++P  W AF Y++EG++GVF 
Sbjct: 130 GVEVKVIAGESMGVKSPFYTKTPIMFLDFTLDPKAQTHQAVPESWTAFAYIVEGDEGVFS 189

Query: 321 SMKSMPIASHHIVLLGNGDGLEAWNKSSSEVLRFILVGGEPLNESVVQMGPFVMNTEEEI 380
           S  S  + +H++V+ G GD +  WN S+S  LRF+L+ GEP+ E VVQ GPFVMN+++EI
Sbjct: 190 SSDSSTVQAHNVVVFGTGDEVSVWNTSNSRPLRFLLIAGEPIGEPVVQHGPFVMNSQDEI 249

Query: 381 DQTIEDFENCTNGFERAKHWSSQ 404
           + TI D+ N  NGFE AKHW S+
Sbjct: 250 EMTIGDYRNGMNGFEMAKHWRSE 271

[Close]

BLAST of CmaCh16G009370 vs. TAIR 10
Match: AT1G02790.1 (polygalacturonase 4 )

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-25
Identity = 56/131 (42.75%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 1   MIAPADSPNTDGIHIFESSGINIMHSVIGTRDDCISLGPGSKFINITDVECGPSHGISIS 60
           + APA+SPNTDGIH+  +  ++I+ S I T DDC+S+G GS  + +  V CGP HG+S+ 
Sbjct: 210 LTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVG 269

Query: 61  SLEKYPN-EDVSEVAIRDPTFVGIDNGVRNKTWSTSFSSSVSKIAFLNLEMKELCVALKH 120
           SL KY N EDVS + + + T +  DNG+R KTW  S  S    I F N+ M+    ++K+
Sbjct: 270 SLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQ----SVKN 329

Query: 121 PRLVDRTFLAR 131
           P ++D+ + +R
Sbjct: 330 PIIIDQNYGSR 336

The following BLAST results are available for this feature:

BLAST of CmaCh16G009370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPS9	3.4e-108	67.12	Pirin-like protein At1g50590 OS=Arabidopsis thaliana OX=3702 GN=At1g50590 PE=2 S...	[more]
Q9SEE4	1.3e-107	65.49	Pirin-like protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
Q9ZW82	6.2e-102	61.89	Pirin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PRN2 PE=1 SV=3	[more]
Q9LX49	9.5e-95	56.27	Pirin-1 OS=Arabidopsis thaliana OX=3702 GN=PRN1 PE=1 SV=1	[more]
O00625	7.8e-89	55.32	Pirin OS=Homo sapiens OX=9606 GN=PIR PE=1 SV=1	[more]

BLAST of CmaCh16G009370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50590.1	2.4e-109	67.12	RmlC-like cupins superfamily protein	[more]
AT2G43120.1	4.4e-103	61.89	RmlC-like cupins superfamily protein	[more]
AT3G59220.1	6.8e-96	56.27	pirin	[more]
AT3G59260.1	2.0e-84	53.61	pirin, putative	[more]
AT1G02790.1	1.6e-25	42.75	polygalacturonase 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 255..362 e-value: 4.2E-104 score: 349.7
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 134..388 e-value: 4.2E-104 score: 349.7
IPR008778	Pirin, C-terminal domain	PFAM	PF05726	Pirin_C	coord: 286..393 e-value: 5.5E-32 score: 110.3
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 3..113 e-value: 2.0E-33 score: 115.8
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 1..119 e-value: 6.7E-33 score: 115.9
IPR003829	Pirin, N-terminal domain	PFAM	PF02678	Pirin	coord: 140..233 e-value: 2.3E-31 score: 108.0
None	No IPR available	PANTHER	PTHR13903:SF26	SUBFAMILY NOT NAMED	coord: 110..404
None	No IPR available	CDD	cd02909	cupin_pirin_N	coord: 138..235 e-value: 6.92208E-60 score: 187.743
None	No IPR available	CDD	cd02247	cupin_pirin_C	coord: 284..361 e-value: 7.97465E-21 score: 83.8198
IPR012093	Pirin	PANTHER	PTHR13903	PIRIN-RELATED	coord: 110..404
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 121..402
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 2..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G009370.1	CmaCh16G009370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity