CmaCh16G009150 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G009150
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1
Location	Cma_Chr16: 6881544 .. 6894516 (+)
RNA-Seq Expression	CmaCh16G009150
Synteny	CmaCh16G009150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCCGCCCACCTACGGCCTACGGCCTGATTTTTCCTCTCCTGGCTTTCTTCCCCCATGGCCGAACCCATGGAGGAAACCACGGTTGTTGATGGCGAACCCACTCTACTCGCTGGCGAGAAGAGGTCAATTGAGATTCACGGGGACGATGAACTTGCGGAGCCTCAGTTAAGAAAGAAGCCCCGTAATGGTTGCGAGTTGGGTCCTAATCTCCGGAGGGTTGCGGAGATTGTGTTGGTCATGTCCACAATGACGGCGCTGCGTGCTGGAAAGAAGCCTACTGATGCCGAGGTTGAATTAATGGCTGAGGCTAGGGCTAAGTTGGTTCAGATTTGTGAAGGATTGGCTCCCAAGGATATCGTGGGAAGGGAAGGAATTAGCTCTTTGATTGAAGATTTGGGGCTGCATGGTAACATTAGGGATCAGAAGTTAGGGTTTCGCGGTCCCAGGTTGACGATAGCGGAGAAATTGGCGCAGACAAAGAAGAAGGTATGTTAATGCCTTTAATTTTACCTACTTTTGTTATCTCTTGACTCTCTGCGGAGGGCTGCATGGGTTCTTCAGTTTTCGTGACCGGTACTATTTGATGCTTGATTGTAGATAATACTTCTTGAAGTCTGTTTAATGCTACTCTGCTTGACTGTTAGTTATGTTCAAACTTGTTTGAATGAAACCCGGAGGATGAGACTACATAGGCATTCTTGTCTTCATTTGGTTACTGATAACCTAAAAATCTTCACTTCTTCCGCGGAAAGATACACATGGATGTAATTCTCCAGTCTGCTTCCGAGTTCTCTGATTCATTATTCCATTGGAGATGCATTAGTTTTCTCGCGGATATCTATGGACACAGTGGGGGAGGGTATTGGTTGCTAATAGTTAACCACAGTCTTTCTTTTTTGTGGAAGAACCACACACCTTACATTGACTGAAATGAAAGATTTCAGAGAAGAAGCGGGCAAATGATTGCCAAAAAAGTGCTTGAATTTGTGTAGTGTTGTAAGTAGGTTAGTTACAAAAAAAAGGAAATCTTAGCCCTCCAAATAGGTTAAGTATTTTTCTTTCTTTCCATAATTTCTGAACCCCAGATATGAGGGCAGTCTCCATTGATGTTGTGTTCATCTGAGTGTTGCACTGAAAGCCAAAAGGAATCAGAAGAGGAATACTAATCTTAAAAAACCCTGCTATTTCTTTCCTTCCAATGACACCAAAGAAGGGAGCGAGTTGAATATCTCCAAAGGTTCTTTTCCTTCTGCCAAAAATCTTTCCATCGACTGCTTCTAAAAACCCATCATCAATATCCTCGAGGAGACAACATTCGACCCCCAAAATATTAAAGAAAAACCACCCTTTAACAGCAAATTGACAGTGAAGAAACATATGATCTAAGGGCTCTTCCTCTCAAAGGCGGAGACAATAGATCGAGGGAGACATCACATAGTTTTGAAGCATTCTTTGAAGATTTTTGTTTAAACTTCTTAGGCTAGGGACCATAAAAAAACCTATCACCTTCTTAGGGGTCATGTATTTCCAGATGAGATTCACCATAGAAGAATTCAATTTCCTTGTCCCAATGATCTGCTTCAAGAATGTGGACATGGTCGGAAAACCCTTAGAAGGATCTATCATCCACACATATCTATCATGATCATTACCCACCACCAAAGTATTTAGAATGTGAACAAGGTTGATTGATCTTCCACACCTATCTATCATGATACTTGTCCCATGCTTGTTGCATCTCATTCAAATAGTGGGAAAATAATGACCATTTTTTTTAATGGAAATAACGTAGATATCTAGAAAATATTGTGTTTAGGTCTTTGATCCGAACCATTTATCTTCCCAAAACTTTATTCTTCTCCCATATCCCACAACAAACTTAGCAAAAGTAAAAAAAAAAAAAAAAAAAAAAACTCATTGGTTCTTTATTATCCCAGTACAGCTGCTGCCTCACTTTTTCTTTGGAAGCTTTATATTCCAATGGTGGTGATCTGCCCCATAAATAGCATAAATCACTCTCCATGAAGCATTCTCCTCTTGAGTAAATCTCCAAAGCCATTTCATTAGGAGAGTGCTGTTTCCTTGACGAAAAGAACCAATCCCAAAGCTACCATAAATTAAAGGAATAGAATTACACTTCTAGCTTAGTAGATGAGAAGCCGGTTTGAATGTGCACCATCCCACACAAAATTGCTAACAATCTTTTCAAGGCAATTGATAACCTTAGCAGGGGCTCTCATATGAGAGAAGAAATATTAGTCACCCACCTTTCGATAAAGACAAGCCTCTCTGTTTATCAACTTTCACTTTGAACTTCTTCACTAAAGATATTATTTTGGTGGGGGCTCTCATAAGAGAGAAGAAACAACAAGGCTGAAGATCTTGTTCTACTTGGAAAAAAGATGGTTGCTGATATGAACCAAGAAACATCAATCATACAAGATATTTCAATGAAGATGCGAAGAAAATGCTGTTGAAATTATCGAGAGATATTTCAATTCATGCCACATTGAAGAAGAATGAAGTTTCATTGTTATAAATTTTGGGTGGATTACAATTTAGAGTAATTTAGAGTTATTGTATTTCATTAATTTATTTTAAGACATTTTATTTACTTTAGGTTACATTTACATCATGGTTAATTATGACCATAAACTATGAATGTTACAACTCTTGGAATGCCTTTAATGTTTCATTTTGAGGCTATATAAAGCCATATATGTTGTATTTGTAAGTAGACTTGAAAATATAGTAAAAGGAGCATTTGTGCTTTCTTTAGCAAATAGCTAAGTTTCTTTGCAATTCTATGTAGTTTAGGTTGCATGTAGAATCATTCAAGCTTGACATGATCAATCTTGCTTGTGGAGTGATTCGAATCTCAAACAAGTGTTCTTGCGTTGAGATATTTGATCAACAAGAATTATTCAAGCTAGACATGATCGATCTTGCTTGTGGAATGATTCGAATCTCAAACAATGTTCTTGCCTTGAGATATTCGATAAACAAGGTAATCCAAATCGTACTCCCCTTGTAGTGATTTCCTTATATCAATTGCTCTTCGGGAGAAGACTTACGCTAATTCAATCTGTGTTAGGAGGGATCCTTAACTATTTCTTGTCGATAATTAGGATTTCACTCTTGGTAAGTAAGTCCATAGAAAGAGTGGTGAGAATTTCCTTTAGGAAAGCATTGATTGGGGGAGGATCCTATTTGGTCAAGCGGGAGGTGGTCTTGAAGCTAGTGGATCTAGGAGAATTAGGCACTGGGAGCTTGAGGTTACAAAATGAGGTTCCCTATAAGTGGTTGTAGCGCTTCTTCCTAGAGCTTAACATACTGTGGCATGTGGCATAGGGTAATTGTGAGAAGGTATGATATGCACATTTTCAAGTGGTGTGAGGGTGGTGGATCAGGCCTTAATGAAAACCCCTTAAAGTTTTTTGGTGGGGGGGGTTGGTTTGGTAAACAACTCGACTTTCCATGCATGTACCGGTCGGATACGTCACTTAACACTAAAATTTTGTAATTTTAAAGCATATGAAATCATGCAGTAAGACATTTTATAAAAATCATGCTTGGGGTACCCCTTTCTAAAGAAATTTTAAAGACATGCAATTTAACCAAATAGTTCAACCACAAAATGATTTAAAAGAAAACGACATCAATCCAAAATTTCCTAGTTCCTGTAAACTACGGGTGCTTTAACAAAATTCAAATAGTTAAAATTAACTCGATGTAGAGGCGTGTTAAATAGATAAGAAAAACATAAAAACTCTAAGTTGCCTCATGACGGGCTTCTCCACCTTGCGCCACTCTTGTTCTACGACCTTGCCCTCACTTGAATATCATTTTAAAAACAGGGTGATTATTAAAATACTCAGTAAGGCACCGTTCTATTTGGGTCAGATATGCAAACCATCATATAGTTCATCAATTAGAATCGAAGAACCTTGGTGGTTGATTACCCCAAACATACAACGTGTAACCTACTCACCCAAAATCATTTTTTGCAATCACTCCTTAGTGATCATGGATGGTTGCCTACTCGATACACACAACATGTAACCCTTACCACAAAAATAAATATCAGCAATCGCCTTACATGATTATTAGTGGCTGGTTACCTGATACACAATGTGTAACCCTTACCACACTCATTGCATTCAAGCATAAAATGCATGCATTTGGTCCCAAAACATTTATTTTCATGACCAATCAGCATGACAGCAAACAACAAGCATCCACACAATAACATACACATGCAACTGTATTCTAGAAAAACAAAAGGGTTTAGTTTCAATAGGAAGGTTCCTACCTAGAGACTTCGCTTTAGAAATTTCGATTTATTGGCCCAACTATCCTAGTACTGAACTTGCATTCAATCACCCAACAAATCAACCTATGTTCACATGATACAATGATTGCATGACAGCAAACAACAAGCATCCACACAATAACATACACATCCAACCGTATTTTAGAAAAACAAAAGGGTTTAGTTTCAATAGGAAGGTTCCTACCTAGAGACTTCGCTTTAGAAATTTTGATTTATTGGCCCAACTATCCTAGGACTGAACTTGCATTCAATCACCCAACAAATAAACCTATGTTCACATGATACAATGATTCCAAAGATCACAGGCTTTGTTATTTACATCCTCTTGGGTAAAAGTTGGGTTTGATTCCGTCTTTCTCCAAAAGTAATTCAACTTTAGGAGTTGTCCTATCAACTTCCGACTTAGGCGTCTTGGGGTTTTCTCCTTTCAAACGGTGCTGCTGGTGGTACAAGTTAGTAGCACGTAGTGGTGGTAGCGGTAACGGTGTAACGGCCTAGGCCTACCGCTAGCAGATATTGTCCTATTTGGGCTTTCCCTTTCAGGCTTCCTCTCAAGGTTTTTAAAACGCATCTGCTAGGAAAAGGTTTCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAATCCACCCCCTTCAGGGCCTAGTGTCCTCGTTGGGGCTCGTTCCTTTCTCCAATCGATGTGGGACCCCCACCAAATCCACCCCCTTTCGAGGCCCAGCGTCCTTGCTGACATACTGCCTTGTGTCTACCCCCCTTCAGGGGATAGCCTCTTTGCTGGCACATCGCCCGATGTCTGGCTCTGATACCATTTGTAACGGCCCAGACACACTGCTAGCAGATATTGTTCTATTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACACGTTTGCTAGGGAGAGGTTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACCAATGTGGGATCTCACAAACGGCGATGGTGGTGGCAGTCTCATACCCAGTAACTGTAGCGAAAGATGTGGGCGACGATGAGCTGCAATGGTTGGAGAGCAAGGACGATGGTAGCGAGACAAAGACGACCCTCGGTGTTGCATAACACATCCTTTATTATCCTATGGTGGTCATCTGTCAACAAGTGGCTAAGTGTGGCCGATGGCAAACGACGACGGGAGATGTGGCTACATCTGGCGGTAACGACAGAGGGAGATGTGTTGCAGACATACGAAAACGAGAAAGGAAAAGGGAGATCGATGGCAGCAAGATCTCAGGCTGGGTGCATTAAGAGAGAGGGGGTGTGGCGGCTGTGGTGGTGTGCTTGGCTATTTATGGCTGAGCCCTAGGGTTTTTTTTATTTATTTGATTTTATTTTAGTTTTTTTTTTTTTTGTGTTGGGCCTTTACCGATTGTTGAGTGGGGGATAAACCTTTTTTGCATTATGTTTCCACAGTATATCATATTTTGAACAAAAGGTTGCATTTTTTGCTTTCCTTAGATAACCAACAACCCTGTTTGATAGTGTTTTGGGTCTTCTTTATATCCTATGAGACTTCAAGGTGTACCCTGGGAGATGGGATGTTCATATATGAACTTGTGATCCTTTTAGAGGGGGTATCATGGAATTCCTTCGTCCATGTTTTGTTCGCCCCTTCTCCCTTCCAATTGCCTCTATGCTTTTCTCTCTCTTGAAGGTTAAGGTTCCAAAGAAAGTTAAGGTTTTATTTAACAAGTTTTACCTGAGTGAGTGAATTCCTTGGATTGTGTCCAAAGACTTCCTTCGTTTTATATTTGGAATGGTGTATTCTTTGCCAGAGGCGTGAGGAAGACCTCAATCATTTGATACGAAGTTTCCAATGTGCTCAGTTTCTTGGGACCATTGCTGAACCTCATTTGGTATGTGTGGAGTATGGGATAGGGATGGTAGCTTGTTGTGGAAGAGATGCTTTTGGAATGAGTGTTTAAGGAAAAGGACTAAGTCCTTGGCAAACTAGCTTTTTCGCTGTTTGTATTTGGTTAGAAGTAAGGAATAGAATCTTTAGAGAGGTTGAGAAATATGGTGAGTTTGAGAGGTGATTAGGGTTAATGCTTCTGTTTGGACTTCGGTTGCTAGACCTTTTTGTAATTATTATCTTAGTCTTGTTCTTTTGTATTGGAATTCTTTTCTATAGTTGTTTTGGGCTCCTTGTTTTGGGTTTATTTTTTGTATGCCCTTGTATTACTTCAATTTTTTGAATGAAAGCTTGATTTCTTATAAAAAGAATAAAAATATTTCCATTAATGGTGCACCTAGTATTGAGAAAGGAATGTCTTTGGGTATGTGGATTAGTTGTTGGGGTGGGTAGTATTCTTTGTAAGATACAAGAGAGTTGCTCCCAAGCTTCTAAATAGGTAATCTCTTCCTTGGACCTTTCTTCATCTAGTTGTTCATTAATAGGGGCGTCCATTATCGCCAGGGTCTTTCTTTGAGGACACCTCATTAGAAAGGTTTGGCTTACTGGCCCCACCTTAACACTTGGCAAGAGTGATGCATTTGTAGAACCTTTTGGTCCTCTTGTTGTTGGTTCCTAAAGTGCCTTTTGCCCCTATCCTATTATTTGGTGTATCATCGATTCTTCCTTGCTTTTTTCATGGTTACAAGGAACTGCTCATTTGGAAACTCCTTTGAGCATCTGTTGTGTTCTTTTTGAAGTCATGTTGTGCTTGTCCACTGTTATTCTAGTCGTTGAGCTCCTAATCTCTGTAGCTAATTTGATACCATCTACTAGGTAGTAGATCAGATGTAGAATCACCTTTTTCCTATTTTATCTTGTACTCCATCCACATATCTAGCTATTTGGTGGTTTTCTAACTCACCAAGAATGTTAGGGCACTCAATCTATTGAATTCCTCTAAATAGTCCATAACTAGTTTAGTTCTTTGGATGCAATGTTGGTGTTGACCGTACAACATTTGCTTGTAATTTATCTGCAAGAACGGTTCATTAGTTTGAGCATCTTTGGCCAAGTCCTTATGGACCACTTTCCATATCTCCTTCTATTGGTTTGAATTTTATCCCACCATGCAGGTTCTTCCTCCAATTTACTTTCTAGCTTTACTTTCTTTTTATTGGGTGTGCCAGCGCAGTTAAGGAAGGATTGGCCCAATCAAGAGAGGCTTCCATGTCAATTTTCCATTAAAAGTTGGGAGTTCCACCTTCACTTTATAATCGTTGCTTCCTTCATTTTGCCACTCTTTTCTCCTTGTATGGGGTAAATTTAAGTTATAAGCAAAGTGTTGGAAAGGCCTATCCTCCTCCCTTGAGTTGTCTAATTGTTGGAACCGTGGATTTTTGTAGCATGTATCTGGAGTTCAGAATGGCAGAGTAGCATTTCTTGGGTACTTGTGGTGCAACCTTCTTGTTTGTTCTTGGGGTGGTTCACAACAAGCAATAGGGTGATGAGTATTCGTGTCATTCTTTATTCCTTGGTTAAGCATGTTAGGTCTTTGGAGGGTTAATTGTTCCATTTGTCGTGCCATGGTTCCCATCATTTGGTACATCATCAATATGACTTTTCATCTCATCCACTGATTCTTCCATTTGCAAGATGCATTGGTTGAGAGATTTTGGAAAGAGGCATAAGGTCTCCAATCCGGGATGATCTTTGTCATTACTAGAGGTCACGAGGTGCTTCTTCCCTACCATTGGGTCTCTTCGTCAAGGGCACTCTGATACGAAACCCATGCGGCCGTAAGTATTCTCTAGAGTTTTTATGAAAGAATGTTTTGTACAGCTTAGTGAACATTTATAGGTTCCAAAAGGATTTGAGTTAGCTCCCAACAGCCATAACAACTCCCTAACAACCTCTGCAACTAACTTTAACATCAATTGGACCCACCTAATCAATGGTAAGAGTATAAGCAATCTGAATACAGCAGTTAACAGCCAACTAATCGACAAAAACAGAACATAGACTGCATCAGTTGGCATACTGATGCTCTGGGATCCTTTGTTTTCTTGTCCTTCTCCACTATCTTGACATAACTATCATGTCCCCTAGACCACTACTAGACAGAGAAGTTTGATCCTAAAAACGATCTCTTATCTATTGCAACTTAGTCATGTGAGCACTAATACCTACAGTTTTATGGAAAGGTGGTACCTGTCCCTTGCTCTATCTTCAGATTGGTGTGTCATATGCAAGGGATTGAGTCCCAAGGTTACGTGTTTTCTTATTTGTCCTTCTGTATTCAGGTTTGAGCATACTCTCCCCCTTCAAATGGCACATCGTGTCATTATTTCATCAAGAAAAAGAATATCATTTGCCTTTAATTTAATACTTCGTATATTTTTCTCATAAAAAATTACTACTTATATTTGGAGTCTAGCTTGAAAGTAACAACAAAGCTTTTAACCGCTTATAGAGGTCTTGAACACTTTTCTAGATATAACTTCTTTTGTAGCTCTCTCTTCCTTGAAATTTATATGCTTCCCTCCGTAGCTAGTTTAAATATTCTTTTTGCTAATTAGAAGAGCTTTTCATAATCTTCTTTGACATGGAGTTTAACTTTTATTCTTTGGTGTAACTTCATATAATCTACGTAATTGTTTGGCATGTTAGTGAATAAAATATATATTCTAATAATATCTCCAAGAATGTGAATGATCTTTTCATGAGAATTTTTATTCTTGCTTTCTCATCTAGATGGAAGATTCCAAGAAATATATCCCACCTTCGGGTTATGGATCTCATCCAACCCAAAAACATATTATTTCATCGATTGAGAACCGTGGGCCATTGCCTTCTGTACGGATGTTTCCCTCAGACAAATCAAGTCCTGTCCCTAATTCTGTGGGAGGCACTGCCGGTACTCTGCCTTCAGGTCATGTTTCTGTTGCTGGTTCTTCGTCTATGCAGGTTCAACCGCAACTAACAGGCAATGAAGTCAGAGCTCATAATATTTCAAGTGGATTTCCAATTAATCAACAAGGAAGGGACTCTTCCTCACTCTTGCATGGCATTGAAAGACCACTAAATGGGACATATGGATCTCAAATGCAAGGTATTCTTTTTTTTTTTCTTTTTTCTTTTTATATATATGCTTTTGCCAAACGATGTGAAGTCTTTTTTTTCCCTTTTTATCTATGCAATTTTTCTTGTGATGGATATGGGGCGACTTTTTATTTATATTTTCTTCTCCTTGATGAAAGTTTAGTTCATCATAAAAGAAAATATCAATTATATTGCGTATAATTTTTTTCCCAATTAAATTTAATTTGGGTTGGAGAAACCAGAAGTGATGCAGTGGACAAGATCTATTCCAATAAAATGCTTCAGGCTAAAATACATTCTGTAAGATTGACATCACTGATACGGTATTGCCTGTGAGTGTAAGAGCACGCTCCTGTAATTTTTTATTGAACTCAAGTTACCTTTCATTTGATGTTTTCAGTATTTTGATTATATTTTGTTTGAGCGAGAGTGACGATAAAACATGATCAGGGGATAGTTAAGTTAAAGTCTTTGCACACAATTTGTTGTTTTTCAGATTTATTACGTTTTTGTATGTATTGGTACTTTTCAGTTAACTCTTCCGTAAATCACTCTCTGGCGAGTGCTCCAACCTGGTCTGCTCAAACTCAATCTGCCTTGTCGGCTAAAGGTGGGCCAGAACACAAGTTTCCAAATCATTCTGCTGCTAATGCTCAGGGAACCACAGATTCAAGAGCCTTAAGATCGTCTTCTCAAGCAGCAAGGGACCAAAGCTTTAGACCTCCAATTCCTCAAACTGGGACAGGAAATATGGCTGGTTTGCAGCCGCCGCATTTACAGAGCATAAATTTTGTGCAAGGGCCTTCAGTTTCTAATAGCCACAATGAAATTGTCAAAATTATTCAGAAGCTGTTACAGCCACAGCTTCCTGATCATCCTACTTGGAATCCTCCTTCAAGAGATTACATGAACAAGGCTGTGACTTGCCAAACTTGTCAAGTTACCATCAATGAGATTGATAGTGTACTTATATGTGATGCTTGTGAGAAAGGATTTCACTTGAAATGTGTACAGTCACCTAATCAGAGAGCGATTCCTAGGGGGGAGTGGCACTGCCCAAGATGCTTAACTATAAGCAATGGGAAGCCTTTACCTCCTAAATACGGGCGTGTCATGAGGAGTAACCCCCCACCAAAATTATCTGTCAATACCAGTGGATCTCAGCCACCAGAGAAGAGTTTAGGAGCCGCTGTGGAACAAAAGGCCAGTGCTGGACAGCTGAAGTTAGTTTCTAATGGAGGTTTAGATTTGCTAAGTCACCACCAGCCTGCTGAGGATGGAAGCAACGCCAATGAATCATCTGGTATCAAAATTCCAAATGCGGAAGAAGCTCATGGAAATAATTTTTTACCAATTAGGAAAGACATAGATGAGAAACCAACCTCTTCGACTTCCCTGAATACCCCAGCCAAATCCTTGGGGATGGTTTGTGAACCCTCTTCTGCTGAGATATCAAGTGAAGTATCTGCTCAGCACGTTAAAAGTTCTCAAGCACCAATAGGTGAAGATGGATCCTCAGCAAAAGCAGAGCCTCCAGAAGAATCTCAAACTGCGGGTGACAATTCTAGTAACCCTAAACCCCCTGACATTCCTCAAATTCTTGATCAGAAAATGGGTTCTAATGGTCCAGAGGAACCTTACTTAACAGAAAGTTCTCATGACACTTCAAATGTGAAGAAAGATGGCCATGAAGTTCTGCAGGAGAATAATGTTGAAAATTTTGAAGCTAGCATCGTAAATAGAGAGCAGTCCGGGACTTCTTCCAATGATCTGCATGATGTTGAATGGATTGGAGACCCACATCAGCTGACAGATATGAGGGCATATTACAAATCCTGTCTTGTTGATGGGGTTACATATAAAGTTGAAGAATTTTCTCTTTTTCACTCCAACAACGGGAAATTGATGCCCTATAGGCTTCAGGTGAACAAAAAATTGTTTAATAGAGTATTTAAGTTGATTGTCAAATTCATATGGTTTTCTTACGCACATGAAAATTGCATCCTTTTTTGGAAATAATATGGGGAAGCTTTTACTCTTGATGCAGTCCTTGTACCATGAATATGAAAGTGGATTGAACTGGGCTATTCTTAAGCAGTGTTACTTTCATGAGGACTTGCCCAAGGAAGTTGCCCACCTCTGCCCGTGCTCCCCTGAACAAAATGAGGTACACTTTTCATCTTCTTTTATTTCTCTAATTTCTCCATTTTCCTTGTATGAGATTCCTCATTCATATATGTTCTTGCACACACCTCCAGAAGTTATACTCAGATCTCACGTCAAATTGTCGTTGCCTATTTCTATGTGATTCCTAATGTCGGACCTTACTTAATACTGCACTAGTTGGTATAGAGAGTTTCATATGGACTTCATATTTGTAATTGTTTGTAGGTATATACATCCGATGGCGACATTTGTTTAGCTGTGGGCTTAATTCGAAGCCCATGTGAAGTTCTTCCTGTTGCCAAGTATAAAGAACATGAAAGACGAAAACAATTGGGTCCTGGGGCAGATGATGGAATAAAGCCAACTTTCCTGTGCAAGTACGTCTATTTCCTTGGACAACTCTCTAATCCATTTGTTACTTTTGAAGACTGATATTAAGCACTTTTCCTTTATCGAACAATGTGTGTTGCTTCTTAGAGGATGAATTCCGATTTCCCTTCATGTTGGTAAAATATGGTTTTGCAGATGGTTTTATACTGAAGCTAACAAAGAATTTGTACCTTTTACTGATGCCGTATGTGAAAGCTTCTCAGTGATGCAGGTAATAGTGGACTAATTAGTCCTCATTTGTTCTAAGGTCTTTGTGGGTCATAGCTTGCATTTACATTTCAGCCATTTAAAATTGGTTTCTTCTGGTTGTTATGACTGTAAAGAAGCTGTCAGTAATTAGGATATGTGCCTATTGAAAACACTCTATTGCTATGTTGTTCTTAATCAGTGAAGAATATCCATTCTTTTCTCCATTAAAATGGATGTAGTGTGAGAAATCCCAATTGAAGCTGGCTACTGGCATGTGGTAGTATGACCTGTAGAACTGAGTGTTTGTAGAACTATCGGGCCGTATTCGAAAGATTCTTGCGCCTTGTGTCTTTATTTTTCCTCATGTTTTCATGCCATAACCTTTATATCATTTTTAGTTGGTTCTTTTACAAACATTTGAAGACTGATCAGTTTATTTGCATTGATACACATATAGGGCGACCTGCAATGACAAGTTAATGGATGAATGAATGTCCATATATTCAAATGTTTTGAAGTAGTAGGTAGCAATACTCCCCGTCTGTTTTTCTTTCTTGTGACTGTAATTTAAGGCTGTTTCTTCTTATATAACCCCATATGAGTTACCAAGCCCTGTCTCTCTCCCTCTCGTAGGACCCCTTGTCTGTATATTATTGTATCAACAACACCTGCCCTGCTTTCACAATGAAAGAGGTGCGTTTGTATTGTAGACATCTTTCATTTTTCATATTACAGAGATTTATAATATGTATTTTTCTTGTTCTTTTCATGATAGTTGAGTGAAGCAAAAGATGGTGAATGCCACTAGTAAAACAATGGTACAAGGTGGCTAGAATGGAGT

mRNA sequence

CTTCTTCCGCCCACCTACGGCCTACGGCCTGATTTTTCCTCTCCTGGCTTTCTTCCCCCATGGCCGAACCCATGGAGGAAACCACGGTTGTTGATGGCGAACCCACTCTACTCGCTGGCGAGAAGAGGTCAATTGAGATTCACGGGGACGATGAACTTGCGGAGCCTCAGTTAAGAAAGAAGCCCCGTAATGGTTGCGAGTTGGGTCCTAATCTCCGGAGGGTTGCGGAGATTGTGTTGGTCATGTCCACAATGACGGCGCTGCGTGCTGGAAAGAAGCCTACTGATGCCGAGGTTGAATTAATGGCTGAGGCTAGGGCTAAGTTGGTTCAGATTTGTGAAGGATTGGCTCCCAAGGATATCGTGGGAAGGGAAGGAATTAGCTCTTTGATTGAAGATTTGGGGCTGCATGGTAACATTAGGGATCAGAAGTTAGGGTTTCGCGGTCCCAGGTTGACGATAGCGGAGAAATTGGCGCAGACAAAGAAGAAGATGGAAGATTCCAAGAAATATATCCCACCTTCGGGTTATGGATCTCATCCAACCCAAAAACATATTATTTCATCGATTGAGAACCGTGGGCCATTGCCTTCTGTACGGATGTTTCCCTCAGACAAATCAAGTCCTGTCCCTAATTCTGTGGGAGGCACTGCCGGTACTCTGCCTTCAGGTCATGTTTCTGTTGCTGGTTCTTCGTCTATGCAGGTTCAACCGCAACTAACAGGCAATGAAGTCAGAGCTCATAATATTTCAAGTGGATTTCCAATTAATCAACAAGGAAGGGACTCTTCCTCACTCTTGCATGGCATTGAAAGACCACTAAATGGGACATATGGATCTCAAATGCAAGTTAACTCTTCCGTAAATCACTCTCTGGCGAGTGCTCCAACCTGGTCTGCTCAAACTCAATCTGCCTTGTCGGCTAAAGGTGGGCCAGAACACAAGTTTCCAAATCATTCTGCTGCTAATGCTCAGGGAACCACAGATTCAAGAGCCTTAAGATCGTCTTCTCAAGCAGCAAGGGACCAAAGCTTTAGACCTCCAATTCCTCAAACTGGGACAGGAAATATGGCTGGTTTGCAGCCGCCGCATTTACAGAGCATAAATTTTGTGCAAGGGCCTTCAGTTTCTAATAGCCACAATGAAATTGTCAAAATTATTCAGAAGCTGTTACAGCCACAGCTTCCTGATCATCCTACTTGGAATCCTCCTTCAAGAGATTACATGAACAAGGCTGTGACTTGCCAAACTTGTCAAGTTACCATCAATGAGATTGATAGTGTACTTATATGTGATGCTTGTGAGAAAGGATTTCACTTGAAATGTGTACAGTCACCTAATCAGAGAGCGATTCCTAGGGGGGAGTGGCACTGCCCAAGATGCTTAACTATAAGCAATGGGAAGCCTTTACCTCCTAAATACGGGCGTGTCATGAGGAGTAACCCCCCACCAAAATTATCTGTCAATACCAGTGGATCTCAGCCACCAGAGAAGAGTTTAGGAGCCGCTGTGGAACAAAAGGCCAGTGCTGGACAGCTGAAGTTAGTTTCTAATGGAGGTTTAGATTTGCTAAGTCACCACCAGCCTGCTGAGGATGGAAGCAACGCCAATGAATCATCTGGTATCAAAATTCCAAATGCGGAAGAAGCTCATGGAAATAATTTTTTACCAATTAGGAAAGACATAGATGAGAAACCAACCTCTTCGACTTCCCTGAATACCCCAGCCAAATCCTTGGGGATGGTTTGTGAACCCTCTTCTGCTGAGATATCAAGTGAAGTATCTGCTCAGCACGTTAAAAGTTCTCAAGCACCAATAGGTGAAGATGGATCCTCAGCAAAAGCAGAGCCTCCAGAAGAATCTCAAACTGCGGGTGACAATTCTAGTAACCCTAAACCCCCTGACATTCCTCAAATTCTTGATCAGAAAATGGGTTCTAATGGTCCAGAGGAACCTTACTTAACAGAAAGTTCTCATGACACTTCAAATGTGAAGAAAGATGGCCATGAAGTTCTGCAGGAGAATAATGTTGAAAATTTTGAAGCTAGCATCGTAAATAGAGAGCAGTCCGGGACTTCTTCCAATGATCTGCATGATGTTGAATGGATTGGAGACCCACATCAGCTGACAGATATGAGGGCATATTACAAATCCTGTCTTGTTGATGGGGTTACATATAAAGTTGAAGAATTTTCTCTTTTTCACTCCAACAACGGGAAATTGATGCCCTATAGGCTTCAGTCCTTGTACCATGAATATGAAAGTGGATTGAACTGGGCTATTCTTAAGCAGTGTTACTTTCATGAGGACTTGCCCAAGGAAGTTGCCCACCTCTGCCCGTGCTCCCCTGAACAAAATGAGGTATATACATCCGATGGCGACATTTGTTTAGCTGTGGGCTTAATTCGAAGCCCATGTGAAGTTCTTCCTGTTGCCAAGTATAAAGAACATGAAAGACGAAAACAATTGGGTCCTGGGGCAGATGATGGAATAAAGCCAACTTTCCTGTGCAAATGGTTTTATACTGAAGCTAACAAAGAATTTGTACCTTTTACTGATGCCGTATGTGAAAGCTTCTCAGTGATGCAGGGCGACCTGCAATGACAAGTTAATGGATGAATGAATGTCCATATATTCAAATGTTTTGAAGTAGTAGGTAGCAATACTCCCCGTCTGTTTTTCTTTCTTGTGACTGTAATTTAAGGCTGTTTCTTCTTATATAACCCCATATGAGTTACCAAGCCCTGTCTCTCTCCCTCTCGTAGGACCCCTTGTCTGTATATTATTGTATCAACAACACCTGCCCTGCTTTCACAATGAAAGAGGTGCGTTTGTATTGTAGACATCTTTCATTTTTCATATTACAGAGATTTATAATATGTATTTTTCTTGTTCTTTTCATGATAGTTGAGTGAAGCAAAAGATGGTGAATGCCACTAGTAAAACAATGGTACAAGGTGGCTAGAATGGAGT

Coding sequence (CDS)

ATGGCCGAACCCATGGAGGAAACCACGGTTGTTGATGGCGAACCCACTCTACTCGCTGGCGAGAAGAGGTCAATTGAGATTCACGGGGACGATGAACTTGCGGAGCCTCAGTTAAGAAAGAAGCCCCGTAATGGTTGCGAGTTGGGTCCTAATCTCCGGAGGGTTGCGGAGATTGTGTTGGTCATGTCCACAATGACGGCGCTGCGTGCTGGAAAGAAGCCTACTGATGCCGAGGTTGAATTAATGGCTGAGGCTAGGGCTAAGTTGGTTCAGATTTGTGAAGGATTGGCTCCCAAGGATATCGTGGGAAGGGAAGGAATTAGCTCTTTGATTGAAGATTTGGGGCTGCATGGTAACATTAGGGATCAGAAGTTAGGGTTTCGCGGTCCCAGGTTGACGATAGCGGAGAAATTGGCGCAGACAAAGAAGAAGATGGAAGATTCCAAGAAATATATCCCACCTTCGGGTTATGGATCTCATCCAACCCAAAAACATATTATTTCATCGATTGAGAACCGTGGGCCATTGCCTTCTGTACGGATGTTTCCCTCAGACAAATCAAGTCCTGTCCCTAATTCTGTGGGAGGCACTGCCGGTACTCTGCCTTCAGGTCATGTTTCTGTTGCTGGTTCTTCGTCTATGCAGGTTCAACCGCAACTAACAGGCAATGAAGTCAGAGCTCATAATATTTCAAGTGGATTTCCAATTAATCAACAAGGAAGGGACTCTTCCTCACTCTTGCATGGCATTGAAAGACCACTAAATGGGACATATGGATCTCAAATGCAAGTTAACTCTTCCGTAAATCACTCTCTGGCGAGTGCTCCAACCTGGTCTGCTCAAACTCAATCTGCCTTGTCGGCTAAAGGTGGGCCAGAACACAAGTTTCCAAATCATTCTGCTGCTAATGCTCAGGGAACCACAGATTCAAGAGCCTTAAGATCGTCTTCTCAAGCAGCAAGGGACCAAAGCTTTAGACCTCCAATTCCTCAAACTGGGACAGGAAATATGGCTGGTTTGCAGCCGCCGCATTTACAGAGCATAAATTTTGTGCAAGGGCCTTCAGTTTCTAATAGCCACAATGAAATTGTCAAAATTATTCAGAAGCTGTTACAGCCACAGCTTCCTGATCATCCTACTTGGAATCCTCCTTCAAGAGATTACATGAACAAGGCTGTGACTTGCCAAACTTGTCAAGTTACCATCAATGAGATTGATAGTGTACTTATATGTGATGCTTGTGAGAAAGGATTTCACTTGAAATGTGTACAGTCACCTAATCAGAGAGCGATTCCTAGGGGGGAGTGGCACTGCCCAAGATGCTTAACTATAAGCAATGGGAAGCCTTTACCTCCTAAATACGGGCGTGTCATGAGGAGTAACCCCCCACCAAAATTATCTGTCAATACCAGTGGATCTCAGCCACCAGAGAAGAGTTTAGGAGCCGCTGTGGAACAAAAGGCCAGTGCTGGACAGCTGAAGTTAGTTTCTAATGGAGGTTTAGATTTGCTAAGTCACCACCAGCCTGCTGAGGATGGAAGCAACGCCAATGAATCATCTGGTATCAAAATTCCAAATGCGGAAGAAGCTCATGGAAATAATTTTTTACCAATTAGGAAAGACATAGATGAGAAACCAACCTCTTCGACTTCCCTGAATACCCCAGCCAAATCCTTGGGGATGGTTTGTGAACCCTCTTCTGCTGAGATATCAAGTGAAGTATCTGCTCAGCACGTTAAAAGTTCTCAAGCACCAATAGGTGAAGATGGATCCTCAGCAAAAGCAGAGCCTCCAGAAGAATCTCAAACTGCGGGTGACAATTCTAGTAACCCTAAACCCCCTGACATTCCTCAAATTCTTGATCAGAAAATGGGTTCTAATGGTCCAGAGGAACCTTACTTAACAGAAAGTTCTCATGACACTTCAAATGTGAAGAAAGATGGCCATGAAGTTCTGCAGGAGAATAATGTTGAAAATTTTGAAGCTAGCATCGTAAATAGAGAGCAGTCCGGGACTTCTTCCAATGATCTGCATGATGTTGAATGGATTGGAGACCCACATCAGCTGACAGATATGAGGGCATATTACAAATCCTGTCTTGTTGATGGGGTTACATATAAAGTTGAAGAATTTTCTCTTTTTCACTCCAACAACGGGAAATTGATGCCCTATAGGCTTCAGTCCTTGTACCATGAATATGAAAGTGGATTGAACTGGGCTATTCTTAAGCAGTGTTACTTTCATGAGGACTTGCCCAAGGAAGTTGCCCACCTCTGCCCGTGCTCCCCTGAACAAAATGAGGTATATACATCCGATGGCGACATTTGTTTAGCTGTGGGCTTAATTCGAAGCCCATGTGAAGTTCTTCCTGTTGCCAAGTATAAAGAACATGAAAGACGAAAACAATTGGGTCCTGGGGCAGATGATGGAATAAAGCCAACTTTCCTGTGCAAATGGTTTTATACTGAAGCTAACAAAGAATTTGTACCTTTTACTGATGCCGTATGTGAAAGCTTCTCAGTGATGCAGGGCGACCTGCAATGA

Protein sequence

MAEPMEETTVVDGEPTLLAGEKRSIEIHGDDELAEPQLRKKPRNGCELGPNLRRVAEIVLVMSTMTALRAGKKPTDAEVELMAEARAKLVQICEGLAPKDIVGREGISSLIEDLGLHGNIRDQKLGFRGPRLTIAEKLAQTKKKMEDSKKYIPPSGYGSHPTQKHIISSIENRGPLPSVRMFPSDKSSPVPNSVGGTAGTLPSGHVSVAGSSSMQVQPQLTGNEVRAHNISSGFPINQQGRDSSSLLHGIERPLNGTYGSQMQVNSSVNHSLASAPTWSAQTQSALSAKGGPEHKFPNHSAANAQGTTDSRALRSSSQAARDQSFRPPIPQTGTGNMAGLQPPHLQSINFVQGPSVSNSHNEIVKIIQKLLQPQLPDHPTWNPPSRDYMNKAVTCQTCQVTINEIDSVLICDACEKGFHLKCVQSPNQRAIPRGEWHCPRCLTISNGKPLPPKYGRVMRSNPPPKLSVNTSGSQPPEKSLGAAVEQKASAGQLKLVSNGGLDLLSHHQPAEDGSNANESSGIKIPNAEEAHGNNFLPIRKDIDEKPTSSTSLNTPAKSLGMVCEPSSAEISSEVSAQHVKSSQAPIGEDGSSAKAEPPEESQTAGDNSSNPKPPDIPQILDQKMGSNGPEEPYLTESSHDTSNVKKDGHEVLQENNVENFEASIVNREQSGTSSNDLHDVEWIGDPHQLTDMRAYYKSCLVDGVTYKVEEFSLFHSNNGKLMPYRLQSLYHEYESGLNWAILKQCYFHEDLPKEVAHLCPCSPEQNEVYTSDGDICLAVGLIRSPCEVLPVAKYKEHERRKQLGPGADDGIKPTFLCKWFYTEANKEFVPFTDAVCESFSVMQGDLQ

Homology

[Close]

BLAST of CmaCh16G009150 vs. ExPASy Swiss-Prot
Match: Q5PNS0 (PHD finger protein At3g20280 OS=Arabidopsis thaliana OX=3702 GN=At3g20280 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.5e-33
Identity = 86/272 (31.62%), Postives = 140/272 (51.47%), Query Frame = 0


Query: 348 INFVQGPSVSNSHNEIVKIIQKLLQPQLPDHPTWNPPSRDYMNKAVTCQTCQVTINEIDS 407
           +++ Q  S   +H EI KII K LQP++  +P WNPPSR+YM++A+ CQ C+VTINE+D+
Sbjct: 1   MHYSQTSSFGGNHTEIAKIIHKFLQPRVKQYPLWNPPSREYMSRAMACQICEVTINEMDT 60

Query: 408 VLICDACEKGFHLKCVQSPNQRAIPRGEWHCPRCLTISNGKPLPPKYGRVMRSNPPPKLS 467
           +LICDACEK +HLKC+Q  N + +P+ EWHC RC+   NGKP PP YGR  R       +
Sbjct: 61  LLICDACEKAYHLKCLQGNNMKGVPKSEWHCSRCVQAFNGKPFPPTYGRATR-------A 120

Query: 468 VNTSGSQPPEKSLGAAVEQKASAGQLKLVSNGGLDLLSHHQPAEDGSNANESSGIKIPNA 527
           V T+ ++ P ++ G         G + + +N    ++S     ++    + ++      +
Sbjct: 121 VATTTAKMPFRAAGVLSSSAKKIGPMDIKANQQKPIVSTFSRLQNTGLVSGAATTSQFES 180

Query: 528 EEAHGNNFLPIRKDID-----EKPTSSTSLNTPAKSLGMVCEPSSAEISSEVSAQHVKSS 587
              +        K  +      K   +   N+PA  + +   P+   I+S +S  +    
Sbjct: 181 ASVNAKTTASAAKTTNIGSQGSKENVACGANSPA-PVSLTETPNRTGIASTISVINNGLI 240

Query: 588 QAPIGEDGSSAKAEP-PEESQTAGDNSSNPKP 614
             P+   G+ +   P P  +Q   + +SN  P
Sbjct: 241 SKPLTPVGTMSSTSPLPVVNQLPVNATSNASP 264

[Close]

BLAST of CmaCh16G009150 vs. ExPASy Swiss-Prot
Match: Q8WYB5 (Histone acetyltransferase KAT6B OS=Homo sapiens OX=9606 GN=KAT6B PE=1 SV=3)

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-06
Identity = 22/57 (38.60%), Postives = 33/57 (57.89%), Query Frame = 0


Query: 394 TCQTCQVTINEIDSVLICDACEKGFHLKCVQSPNQRAIPRGEWHCPRCLTISNGKPL 451
           TC  C+V     D++L CD+C++GFH++C   P  R +P+G W C  C     G+ L
Sbjct: 271 TCSACRVQGRNADNMLFCDSCDRGFHMECCDPPLSR-MPKGMWICQVCRPKKKGRKL 326

[Close]

BLAST of CmaCh16G009150 vs. ExPASy Swiss-Prot
Match: Q8WML3 (Histone acetyltransferase KAT6B OS=Macaca fascicularis OX=9541 GN=KAT6B PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-06
Identity = 22/57 (38.60%), Postives = 33/57 (57.89%), Query Frame = 0


Query: 394 TCQTCQVTINEIDSVLICDACEKGFHLKCVQSPNQRAIPRGEWHCPRCLTISNGKPL 451
           TC  C+V     D++L CD+C++GFH++C   P  R +P+G W C  C     G+ L
Sbjct: 271 TCSACRVQGRNADNMLFCDSCDRGFHMECCDPPLSR-MPKGMWICQVCRPKKKGRKL 326

[Close]

BLAST of CmaCh16G009150 vs. ExPASy Swiss-Prot
Match: Q8BRB7 (Histone acetyltransferase KAT6B OS=Mus musculus OX=10090 GN=Kat6b PE=1 SV=3)

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-06
Identity = 22/57 (38.60%), Postives = 33/57 (57.89%), Query Frame = 0


Query: 394 TCQTCQVTINEIDSVLICDACEKGFHLKCVQSPNQRAIPRGEWHCPRCLTISNGKPL 451
           TC  C+V     D++L CD+C++GFH++C   P  R +P+G W C  C     G+ L
Sbjct: 272 TCSACRVQGKNADNMLFCDSCDRGFHMECCDPPLSR-MPKGMWICQVCRPKKKGRKL 327

[Close]

BLAST of CmaCh16G009150 vs. ExPASy Swiss-Prot
Match: Q5SMU7 (Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ORC1 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 7.8e-06
Identity = 29/77 (37.66%), Postives = 43/77 (55.84%), Query Frame = 0


Query: 396 QTCQVTINEIDSVLI-CDACEKGFHLKCVQSPNQRAIPRGEWHCPRCLTISNGK----PL 455
           + C+V      +V++ CD C  GFHL+CV+ P +R +P G+W CP C     GK    P 
Sbjct: 161 EECRVCFRAGAAVMVECDVCLGGFHLRCVRPPLRR-VPEGDWACPYCEAERAGKAIERPK 220

Query: 456 PPKYGRVMRSNPPPKLS 468
           PP+  R++R+     LS
Sbjct: 221 PPEGKRIVRTAKEKLLS 236

[Close]

BLAST of CmaCh16G009150 vs. TAIR 10
Match: AT1G50620.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 266.2 bits (679), Expect = 9.3e-71
Identity = 208/607 (34.27%), Postives = 305/607 (50.25%), Query Frame = 0


Query: 24  SIEIHGDDELAE--PQLRKKPRNGCELGPNLRRVAEIVLVMSTMTALRAGKKPTDAEVEL 83
           S+E   D+E  E  P  +KKPR        + RVAEIVLV+S +  +R GK PT+ E++L
Sbjct: 15  SVEEKRDEETVEESPVKKKKPR----FDEEVNRVAEIVLVLSALRKIRGGKPPTELEIDL 74

Query: 84  MAEARAKLVQICEGLAPKDIVGREGISSLIEDLGLHGNIRDQKLGFRGPRLTIAEKLAQT 143
           M EA++KLV +C+   PKDI+G + I ++IEDLG +G ++DQ+LGFR P+LTI+EKL+  
Sbjct: 75  MVEAKSKLVDMCQEFTPKDIIGVDAIGAVIEDLGFNGKLKDQRLGFRAPKLTISEKLSLG 134

Query: 144 KKKMEDSKKYIPPSGYGSHPTQKHIISSIENRGPLPSVRMFPSDKSSPVPNSVGGTAGTL 203
           K+KME+ KK                        P+ S     +  +SP  N+V   A   
Sbjct: 135 KRKMEELKK-----------------------NPVVS-----TTSTSPAVNNV-SMAHQW 194

Query: 204 PSGHVSVAGSSSMQVQPQLTGNEVRAHNISSGFPINQQGRDSSSLLHGIERPLNGTYGSQ 263
           P+  +  + SS          N   +H +     I Q           +ERP    + S 
Sbjct: 195 PNSEMKASASSV---------NASGSHYVREASGITQA---------RMERP---QFKSD 254

Query: 264 MQVNSS------VNHSLASAPTWSAQTQSALSAKGGPEHKFPNHSAANAQGTTDSRALRS 323
           +   +S        +   +  TWSAQ  S+              S  +    +DS+    
Sbjct: 255 LHTGTSQGPAVPAGNYFGNTTTWSAQPHSST-------------STISFGTASDSKVPVP 314

Query: 324 SSQAARDQSFRPPIPQTGTGNMAGLQPPHLQSINFVQGPSVSNSHNEIVKIIQKLLQPQL 383
           SS    D SFRP + QT  G   G++     +      P  +N+H EI K+I K+LQP+ 
Sbjct: 315 SSSRISDPSFRPFMSQTPPGAFPGMKG---ATYGQTSSPFGNNNHAEIAKLIHKVLQPRA 374

Query: 384 PDHPTWNPPSRDYMNKAVTCQTCQVTINEIDSVLICDACEKGFHLKCVQSPNQRAIPRGE 443
             +  WNPPSR+YM+KA+TCQ CQ TINEI++VLICDACEKG+HLKC+ + N + +P+ E
Sbjct: 375 KQNLLWNPPSREYMSKAMTCQICQGTINEIETVLICDACEKGYHLKCLHAHNIKGVPKSE 434

Query: 444 WHCPRCLTISNGKPLPPKYGRVMRSNPPPKLSVNTSGSQ-PPEKSLGAAVEQKASAGQLK 503
           WHC RC+ + NGK  PPKYGRVMRS    K+S +T+  Q P EK +G  ++QK       
Sbjct: 435 WHCSRCVQLYNGKSFPPKYGRVMRSATTAKMSSSTAEVQLPAEKGVG-KMDQK------- 494

Query: 504 LVSNGGLDLLSHHQPAEDGS--NANESSGIKI-PNAEEAHGNNFLPIRKDIDEKPTSSTS 563
            VS  G+  L   +P +D +     E+  + + P  E+A           I+    +   
Sbjct: 495 -VSQEGMPHLETAKPTKDSAMEQTVEAEDVAMNPIVEKAMSEMVEAEGAAINPIVEAEDG 535

Query: 564 LNTP--AKSLGMVCEPSSAEISSEVSAQHVKSSQAPIGEDGSSAKAEPPEESQTAGDNSS 617
              P   K++  + E   A I+  V A     +QAP G D   A+++ P E  +   +S 
Sbjct: 555 AMNPIVEKAMSQIVEAEDAAINQAVDANF--QTQAPTGND--DAESDDPSEPVS---HSE 535

[Close]

BLAST of CmaCh16G009150 vs. TAIR 10
Match: AT3G20280.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 243.4 bits (620), Expect = 6.4e-64
Identity = 188/595 (31.60%), Postives = 289/595 (48.57%), Query Frame = 0


Query: 25  IEIHGDDELAEPQLRKKPRNGCELGPNLRRVAEIVLVMSTMTALRAGKKPTDAEVELMAE 84
           ++ +G + ++ P   KKPR        + RVAEIVLV+S +  +R G+ PT  E+ELM E
Sbjct: 18  VDGNGAEPVSPP--AKKPR----FDEEMNRVAEIVLVLSALGRMRGGETPTALELELMFE 77

Query: 85  ARAKLVQICEGLAPKDIVGREGISSLIEDLGLHGNIRDQKLGFRGPRLTIAEKLAQTKKK 144
           AR+KL  +C    PKDI+ ++ + S+IEDLG +G ++DQ+LGFR P +TI+EKL+  K+K
Sbjct: 78  ARSKLAGMCLEFDPKDIIRKDDVKSVIEDLGFNGKLKDQRLGFRAPTVTISEKLSLGKRK 137

Query: 145 MEDSKKYIPPSGYGSHPTQKHIISSIENRGPLPSVRMFPSDKSSPVPNSVGGTAGTLPSG 204
           ME+++KY   S   +  T      S+ + G L       ++K+S         A   PS 
Sbjct: 138 MEEAEKYPTTSTVSTGYTLSQPNGSLASPGGL-------ANKAS--------VAHQWPSS 197

Query: 205 HVSVAGSSSMQVQPQLTGNEVRAHNISSGFPINQQGRDSSSLLHGIERPLNGTYGSQMQV 264
            V+ A +S      +L   ++  +  S G P+                            
Sbjct: 198 EVATANTSGSHF--KLDRPQMVLNGASQGTPV---------------------------- 257

Query: 265 NSSVNHSLASAPTWSAQTQSALSAKGGPEHKFPNHSAANAQGTTDSRALRSSSQAARDQS 324
            SS N+    A  WSAQ  S +S    P+ K P               ++SS + A D S
Sbjct: 258 -SSANY---YAEPWSAQLPSTISFSTAPDKKVP---------------IQSSVRTA-DPS 317

Query: 325 FRPPIPQTGTGNMAGLQPPHLQSINFVQGPSVSNSHNEIVKIIQKLLQPQLPDHPTWNPP 384
           FRP    T TG     QP H     + Q  S   +H EI KII K LQP++  +P WNPP
Sbjct: 318 FRPFRHGTFTGTN---QPMH-----YSQTSSFGGNHTEIAKIIHKFLQPRVKQYPLWNPP 377

Query: 385 SRDYMNKAVTCQTCQVTINEIDSVLICDACEKGFHLKCVQSPNQRAIPRGEWHCPRCLTI 444
           SR+YM++A+ CQ C+VTINE+D++LICDACEK +HLKC+Q  N + +P+ EWHC RC+  
Sbjct: 378 SREYMSRAMACQICEVTINEMDTLLICDACEKAYHLKCLQGNNMKGVPKSEWHCSRCVQA 437

Query: 445 SNGKPLPPKYGRVMRSNPPPKLSVNTSGSQPPEKSLGAAVEQKASAGQLKLVSNGGLDLL 504
            NGKP PP YGR  R       +V T+ ++ P ++ G         G + + +N    ++
Sbjct: 438 FNGKPFPPTYGRATR-------AVATTTAKMPFRAAGVLSSSAKKIGPMDIKANQQKPIV 497

Query: 505 SHHQPAEDGSNANESSGIKIPNAEEAHGNNFLPIRKDID-----EKPTSSTSLNTPAKSL 564
           S     ++    + ++      +   +        K  +      K   +   N+PA  +
Sbjct: 498 STFSRLQNTGLVSGAATTSQFESASVNAKTTASAAKTTNIGSQGSKENVACGANSPA-PV 525

Query: 565 GMVCEPSSAEISSEVSAQHVKSSQAPIGEDGSSAKAEP-PEESQTAGDNSSNPKP 614
            +   P+   I+S +S  +      P+   G+ +   P P  +Q   + +SN  P
Sbjct: 558 SLTETPNRTGIASTISVINNGLISKPLTPVGTMSSTSPLPVVNQLPVNATSNASP 525

[Close]

BLAST of CmaCh16G009150 vs. TAIR 10
Match: AT3G20280.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 5.3e-34
Identity = 86/272 (31.62%), Postives = 140/272 (51.47%), Query Frame = 0


Query: 348 INFVQGPSVSNSHNEIVKIIQKLLQPQLPDHPTWNPPSRDYMNKAVTCQTCQVTINEIDS 407
           +++ Q  S   +H EI KII K LQP++  +P WNPPSR+YM++A+ CQ C+VTINE+D+
Sbjct: 1   MHYSQTSSFGGNHTEIAKIIHKFLQPRVKQYPLWNPPSREYMSRAMACQICEVTINEMDT 60

Query: 408 VLICDACEKGFHLKCVQSPNQRAIPRGEWHCPRCLTISNGKPLPPKYGRVMRSNPPPKLS 467
           +LICDACEK +HLKC+Q  N + +P+ EWHC RC+   NGKP PP YGR  R       +
Sbjct: 61  LLICDACEKAYHLKCLQGNNMKGVPKSEWHCSRCVQAFNGKPFPPTYGRATR-------A 120

Query: 468 VNTSGSQPPEKSLGAAVEQKASAGQLKLVSNGGLDLLSHHQPAEDGSNANESSGIKIPNA 527
           V T+ ++ P ++ G         G + + +N    ++S     ++    + ++      +
Sbjct: 121 VATTTAKMPFRAAGVLSSSAKKIGPMDIKANQQKPIVSTFSRLQNTGLVSGAATTSQFES 180

Query: 528 EEAHGNNFLPIRKDID-----EKPTSSTSLNTPAKSLGMVCEPSSAEISSEVSAQHVKSS 587
              +        K  +      K   +   N+PA  + +   P+   I+S +S  +    
Sbjct: 181 ASVNAKTTASAAKTTNIGSQGSKENVACGANSPA-PVSLTETPNRTGIASTISVINNGLI 240

Query: 588 QAPIGEDGSSAKAEP-PEESQTAGDNSSNPKP 614
             P+   G+ +   P P  +Q   + +SN  P
Sbjct: 241 SKPLTPVGTMSSTSPLPVVNQLPVNATSNASP 264

[Close]

BLAST of CmaCh16G009150 vs. TAIR 10
Match: AT5G09790.1 (ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 )

HSP 1 Score: 46.2 bits (108), Expect = 1.5e-04
Identity = 20/49 (40.82%), Postives = 30/49 (61.22%), Query Frame = 0


Query: 393 VTCQTCQVTINEIDSVLICDACEKGFHLKCVQSPNQRAIPRGEWHCPRC 442
           VTC+ C     + D +L+CD C++GFH+KC++ P    +P G W C  C
Sbjct: 65  VTCEKCGSGEGD-DELLLCDKCDRGFHMKCLR-PIVVRVPIGTWLCVDC 111

[Close]

BLAST of CmaCh16G009150 vs. TAIR 10
Match: AT3G01460.1 (methyl-CPG-binding domain 9 )

HSP 1 Score: 45.8 bits (107), Expect = 2.0e-04
Identity = 41/138 (29.71%), Postives = 60/138 (43.48%), Query Frame = 0


Query: 362 EIVKIIQKLLQPQLPDHPTWNP-PSRDYMNKAVTCQTCQVTINEIDSVLICDACEKGFHL 421
           E+V+ I     P  P  P   P P RD      +C  C      I+ V++CDACE+GFH+
Sbjct: 58  EVVRSIHDNPDP-APGAPAEVPEPDRD-----ASCGACG-RPESIELVVVCDACERGFHM 117

Query: 422 KCVQSPNQRAIPRGEWHCPRCLTISNGKPLPPKYGRVMRSNPPPKLSVNTSGSQPPEKSL 481
            CV +    A P  +W C  C T      L P            KL ++ + S PP  + 
Sbjct: 118 SCV-NDGVEAAPSADWMCSDCRTGGERSKLWP-------LGVKSKLILDMNAS-PPSDAE 177

Query: 482 GAAVEQKASAGQLKLVSN 499
           G   E+ + + +  L S+
Sbjct: 178 GYGAEETSDSRKHMLASS 179

The following BLAST results are available for this feature:

BLAST of CmaCh16G009150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5PNS0	7.5e-33	31.62	PHD finger protein At3g20280 OS=Arabidopsis thaliana OX=3702 GN=At3g20280 PE=2 S...	[more]
Q8WYB5	2.1e-06	38.60	Histone acetyltransferase KAT6B OS=Homo sapiens OX=9606 GN=KAT6B PE=1 SV=3	[more]
Q8WML3	2.1e-06	38.60	Histone acetyltransferase KAT6B OS=Macaca fascicularis OX=9541 GN=KAT6B PE=2 SV=...	[more]
Q8BRB7	2.1e-06	38.60	Histone acetyltransferase KAT6B OS=Mus musculus OX=10090 GN=Kat6b PE=1 SV=3	[more]
Q5SMU7	7.8e-06	37.66	Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica OX=39947...	[more]

BLAST of CmaCh16G009150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50620.1	9.3e-71	34.27	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT3G20280.1	6.4e-64	31.60	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT3G20280.2	5.3e-34	31.62	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G09790.1	1.5e-04	40.82	ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5	[more]
AT3G01460.1	2.0e-04	29.71	methyl-CPG-binding domain 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 394..442 e-value: 1.4E-8 score: 44.5
IPR043151	Bromo adjacent homology (BAH) domain superfamily	GENE3D	2.30.30.490		coord: 673..839 e-value: 6.6E-15 score: 57.1
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 395..442 e-value: 2.8E-8 score: 33.5
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 392..444 score: 9.9172
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 383..456 e-value: 7.3E-13 score: 50.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 503..644
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 568..588
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 596..615
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 463..477
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 452..486
None	No IPR available	PANTHER	PTHR47527	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 10..832
None	No IPR available	PANTHER	PTHR47527:SF3	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 10..832
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 395..441
IPR001025	Bromo adjacent homology (BAH) domain	PROSITE	PS51038	BAH	coord: 704..832 score: 10.97259
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 385..451

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G009150.1	CmaCh16G009150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0046872	metal ion binding