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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTGCTTCATCATCCCTTCTGACATACTCATTGCAAGAGCATGCGTCCACCGAAACAGCAATAAAACGCTGCAAGGGCTATATGTACGGTAACTTATGTTCATCCTACTCCCGGATTGGGTACTCCAAAACCAAGTTCCTAACAAGTGCCAAGTTTTCACATAACGAGAATTCATCAAACTGGGAACATATTCAGAAATCTCCAATGAGGAATGAAATCCTGTGCCGTGCTGTGGAAATTGAAAATTCACTTTCTCCCTTTGTAAGCAAGAAGTTTGAGCTTGATGATGTGATCGAATCTCAGCAATTTGATAGAGAGATTCTCAATGATATTTTCGATGTTGCACATGATATGGAAAAGATTGAAAAAAGTTCATCTAAAAGCCAAATGCTCAAGGGATATTTGATGGCTACCCTGTTCTATGAGCCCTCAACTAGAACTAGGCTTTCATTTGAATCTGCCATGAAAAGGTTAGGTGGGGAGGTGTTGACAACTGAAAATGCGCGGGAGTTTTCTTCAGCAGCCAAAGGAGAGACTCTCGAAGGTGATTGAATTGTTTCACCTCCTTTTCTTCACCTTCCTACGGTAGTTTACTTGTAATTTATATGCACTTGATTGCAGATACCATCAGAACTGTTGAGGGCTACTCAGATATAATTGTAATGCGGCATTTTGAAAGTGGTGCTGCTAAGAAAGCTGCCGCAACTGCTGGCATTCCTATTATTAATGCTGGTGATGGTCCTGGACAACATCCCACTCAGGTTTTGTCAGCTCCTTTTTTAGTCTTGTAATATAATGGTTGTATGAATACGTAACATATAAGTGTAAATGATAAGGAAGTGTTATAAGCATGCTTGTTGGTGACGGAGTACAGCATGAATGGTAGAAATTTGAAATGAGTATGTTCATTCGAAAGATTATTGATGTCCAAAATTTTCACCGAGTTTCGTCCTCACAAGAAAAGTTGATATTGACAAATTACTAATTATATACCACTTTTCTGCTTCCATTAAGCAATATAAATAGTAAGTGCCATAGTACTTGCAAAATTATTAAAGAATCGACTCAATTGTTACAAATATTTTCTTAAAGAAACGAATCAACTAAGGGTTATTGTTATTAACAGCCACTAAATAAATATGACTTTATCTCCTATCATCTGTATTTGCTTGATTTGCTGAATTTTGTATAAGAGTTCAAACAAGTGTTTGAATGTTGATCTTTCATTGCGTTTGATTCCAATGAGAACCACTGATTACCATGAATATATGATAAAAGAATGAGGTACTTGATTCATTTTGAGGGTCATATAAAAAAAACATCAGAAAAGGAAGTATGGATTCAGACTCCATAGCTTCTTTTGCTAAGTTTTGCAAGAACTTGAAAATAATGCTGTTCGTAATATTCTGCTATGACGGATATCTGCATCTATTTTGTTTTTGTTTTTGCTTTTGTTTTTTTTTTAACCCTTGACCTTCTTCTGGCAGGCTCTTCTAGATGTATATACTATTCAGAGAGAGATAGGAAAACTGGATGGAATTAAAGTTGGGCTTGTGGGAGATCTTGCCAATGGTAGAACTGTACGGTCACTTGCATATTTGCTCGCCAAGTATCAAGACGTGAAGATATACTTCGTCTCTCCAGATGTTGTAAAAATGAAGGTAACTTTTGAAGCAAAAATATGACAGTATTGTCTATCGGCTGACATTCTTTGTTGTACCATGATATTGGGAAGCAATATTTAGAGAAATAATTACCGGATAAACTGATTTTGCTTTACTTATTGGTATTTTATGGTAAATCGTTGAAGGAAAATCTGTAGGAAGTAACTAGTGAGGTTAAGATCTTCTAATCGTAGAACTTGTTTGTTCATCTAGGATGATATAAAAGAGTATTTGTCATCACAAGGTGTGAAATGGGAAGAATGTGAGAACTTGATGGAAGTTGCGTCCGAGTGTGATGTGGTATATCAAACTCGTATTCAGCGGGAAAGATTTGGGGAGAGGATTGATCTGTATGAACAAGCTAGAGGCAAGTATATTGTGGATAAGAATGTGTTAAAAGTGATGCAGAGACATGCTGTGGTCATGCACCCCCTCCCTCGGCTCGACGAGGTAACAAAGATGAATAACAAGTATTCTCAAACATTTATTTTCAAACATGTCATTACTACAAGTTATACGTTATTTTGCAGATCACTGTTGATGTAGACGAGGATCCGAGGGCTGCCTACTTCCGACAAGCAAAGAATGGTCTATATATTCGGATGGCGCTCGTGAAACTCTTGCTACTTGGATGGTGAAGAAATGCCACCATTGTAAGTTTCGACATTTTATACATGCTTTTCTAGGATGATTTTGTTTAAACAAATTACTAAGATTATAATGGGGGCGAGTTTTAAGTTTGCTACTAGGCGAATGGCTTGATCCCGCTCGCTAGCAGAGAAATGCGAGTACGATTTGCTGAGTTTTTCAGTTTAAGGATAGTTGAATGATTGCTTAAACTTTAAACCTTAAACCCTAAATCTTAAACTTGGATGATCTTGAACTTTTGTCAGGGTGTGTCTCTGTTTAGTTGGAGACGGCTGAACTCGAATTTGGTAGCACTGCTTCATATTTCTTACTGGCCATGTCAACCTTGAACTATATGTTATAGAATCCTTTTACCAAGATGGATCTACTCTCTTAGCTTAGAACAAGTTGTATCCAATTTCTTTTAGTTTATGGCTTTCTATTTAAAACCCATTTGATTTTTTCTTTTATCTTTTAATTTTTTGAACTTGTTTAGGAATTTATTCAATTTTTTTTTCTTTTTTAGATTTTAA mRNA sequence ATGGCTGCTTCATCATCCCTTCTGACATACTCATTGCAAGAGCATGCGTCCACCGAAACAGCAATAAAACGCTGCAAGGGCTATATGTACGGTAACTTATGTTCATCCTACTCCCGGATTGGGTACTCCAAAACCAAGTTCCTAACAAGTGCCAAGTTTTCACATAACGAGAATTCATCAAACTGGGAACATATTCAGAAATCTCCAATGAGGAATGAAATCCTGTGCCGTGCTGTGGAAATTGAAAATTCACTTTCTCCCTTTGTAAGCAAGAAGTTTGAGCTTGATGATGTGATCGAATCTCAGCAATTTGATAGAGAGATTCTCAATGATATTTTCGATGTTGCACATGATATGGAAAAGATTGAAAAAAGTTCATCTAAAAGCCAAATGCTCAAGGGATATTTGATGGCTACCCTGTTCTATGAGCCCTCAACTAGAACTAGGCTTTCATTTGAATCTGCCATGAAAAGGTTAGGTGGGGAGGTGTTGACAACTGAAAATGCGCGGGAGTTTTCTTCAGCAGCCAAAGGAGAGACTCTCGAAGATACCATCAGAACTGTTGAGGGCTACTCAGATATAATTGTAATGCGGCATTTTGAAAGTGGTGCTGCTAAGAAAGCTGCCGCAACTGCTGGCATTCCTATTATTAATGCTGGTGATGGTCCTGGACAACATCCCACTCAGGCTCTTCTAGATGTATATACTATTCAGAGAGAGATAGGAAAACTGGATGGAATTAAAGTTGGGCTTGTGGGAGATCTTGCCAATGGTAGAACTGTACGGTCACTTGCATATTTGCTCGCCAAGTATCAAGACGTGAAGATATACTTCGTCTCTCCAGATGTTGTAAAAATGAAGGATGATATAAAAGAGTATTTGTCATCACAAGGTGTGAAATGGGAAGAATGTGAGAACTTGATGGAAGTTGCGTCCGAGTGTGATGTGGTATATCAAACTCGTATTCAGCGGGAAAGATTTGGGGAGAGGATTGATCTGTATGAACAAGCTAGAGGCAAGTATATTGTGGATAAGAATGTGTTAAAAGTGATGCAGAGACATGCTGTGGTCATGCACCCCCTCCCTCGGCTCGACGAGATCACTGTTGATGTAGACGAGGATCCGAGGGCTGCCTACTTCCGACAAGCAAAGAATGGTCTATATATTCGGATGGCGCTCTTGGAGACGGCTGAACTCGAATTTGGTAGCACTGCTTCATATTTCTTACTGGCCATGTCAACCTTGAACTATATATTTTAA Coding sequence (CDS) ATGGCTGCTTCATCATCCCTTCTGACATACTCATTGCAAGAGCATGCGTCCACCGAAACAGCAATAAAACGCTGCAAGGGCTATATGTACGGTAACTTATGTTCATCCTACTCCCGGATTGGGTACTCCAAAACCAAGTTCCTAACAAGTGCCAAGTTTTCACATAACGAGAATTCATCAAACTGGGAACATATTCAGAAATCTCCAATGAGGAATGAAATCCTGTGCCGTGCTGTGGAAATTGAAAATTCACTTTCTCCCTTTGTAAGCAAGAAGTTTGAGCTTGATGATGTGATCGAATCTCAGCAATTTGATAGAGAGATTCTCAATGATATTTTCGATGTTGCACATGATATGGAAAAGATTGAAAAAAGTTCATCTAAAAGCCAAATGCTCAAGGGATATTTGATGGCTACCCTGTTCTATGAGCCCTCAACTAGAACTAGGCTTTCATTTGAATCTGCCATGAAAAGGTTAGGTGGGGAGGTGTTGACAACTGAAAATGCGCGGGAGTTTTCTTCAGCAGCCAAAGGAGAGACTCTCGAAGATACCATCAGAACTGTTGAGGGCTACTCAGATATAATTGTAATGCGGCATTTTGAAAGTGGTGCTGCTAAGAAAGCTGCCGCAACTGCTGGCATTCCTATTATTAATGCTGGTGATGGTCCTGGACAACATCCCACTCAGGCTCTTCTAGATGTATATACTATTCAGAGAGAGATAGGAAAACTGGATGGAATTAAAGTTGGGCTTGTGGGAGATCTTGCCAATGGTAGAACTGTACGGTCACTTGCATATTTGCTCGCCAAGTATCAAGACGTGAAGATATACTTCGTCTCTCCAGATGTTGTAAAAATGAAGGATGATATAAAAGAGTATTTGTCATCACAAGGTGTGAAATGGGAAGAATGTGAGAACTTGATGGAAGTTGCGTCCGAGTGTGATGTGGTATATCAAACTCGTATTCAGCGGGAAAGATTTGGGGAGAGGATTGATCTGTATGAACAAGCTAGAGGCAAGTATATTGTGGATAAGAATGTGTTAAAAGTGATGCAGAGACATGCTGTGGTCATGCACCCCCTCCCTCGGCTCGACGAGATCACTGTTGATGTAGACGAGGATCCGAGGGCTGCCTACTTCCGACAAGCAAAGAATGGTCTATATATTCGGATGGCGCTCTTGGAGACGGCTGAACTCGAATTTGGTAGCACTGCTTCATATTTCTTACTGGCCATGTCAACCTTGAACTATATATTTTAA Protein sequence MAASSSLLTYSLQEHASTETAIKRCKGYMYGNLCSSYSRIGYSKTKFLTSAKFSHNENSSNWEHIQKSPMRNEILCRAVEIENSLSPFVSKKFELDDVIESQQFDREILNDIFDVAHDMEKIEKSSSKSQMLKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAAKKAAATAGIPIINAGDGPGQHPTQALLDVYTIQREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKEYLSSQGVKWEECENLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYIVDKNVLKVMQRHAVVMHPLPRLDEITVDVDEDPRAAYFRQAKNGLYIRMALLETAELEFGSTASYFLLAMSTLNYIF
Homology
BLAST of CmaCh16G009020 vs. ExPASy Swiss-Prot
Match: Q43064 (Aspartate carbamoyltransferase 3, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB3 PE=2 SV=1) HSP 1 Score: 533.1 bits (1372), Expect = 2.8e-150 Identity = 283/400 (70.75%), Postives = 332/400 (83.00%), Query Frame = 0
Query: 1 MAASSSLLTYSLQEHASTETAIKRCKGYMYGNLCSSYSRIGYSKTKFLTS-----AKFSH 60
M ASSSL + S+ T K K ++ S +S+I Y +T +L S ++F
Sbjct: 1 MTASSSLFSCSMHMEVLTPKISKWPKDFV-----SCHSKISYVETNYLKSTCYPISRFLC 60
Query: 61 NENSSNWEHIQKSPMRNEILCRAVEIENSLSPFVSKKFELDDVIESQQFDREILNDIFDV 120
N S + + K+ R+ I C + +KF+LDDVIE+QQFDR+ILN IF++
Sbjct: 61 INNLSKCDKMIKTRQRDGIHCFS----------EGQKFQLDDVIEAQQFDRDILNAIFEI 120
Query: 121 AHDMEKIEKSSSKSQMLKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSA 180
A DME IE++S +SQ+LKGYLMATLFYEPSTRTRLSFESAM+RLGGEVLTTENAREFSSA
Sbjct: 121 ARDMENIERNSPESQILKGYLMATLFYEPSTRTRLSFESAMRRLGGEVLTTENAREFSSA 180
Query: 181 AKGETLEDTIRTVEGYSDIIVMRHFESGAAKKAAATAGIPIINAGDGPGQHPTQALLDVY 240
AKGETLEDTIRTVEGYSD+IV+RHFESGAA++AAA AGIPI+NAGDGPGQHP+QALLDVY
Sbjct: 181 AKGETLEDTIRTVEGYSDLIVLRHFESGAARRAAAIAGIPIVNAGDGPGQHPSQALLDVY 240
Query: 241 TIQREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKEYLS 300
TI+REIGKLDGIKVGLVGDLANGRTVRSLAYLLAKY+DVKIYFVSP+VVKMKDDIK+YL+
Sbjct: 241 TIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYKDVKIYFVSPEVVKMKDDIKDYLT 300
Query: 301 SQGVKWEECENLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYIVDKNVLKVMQRHA 360
S+GV WEE +L+EVASECDVVYQTRIQ+ERFGER+DLYE+ARGK+IV++N+L MQRHA
Sbjct: 301 SKGVDWEESSDLVEVASECDVVYQTRIQKERFGERLDLYEKARGKFIVNQNILNAMQRHA 360
Query: 361 VVMHPLPRLDEITVDVDEDPRAAYFRQAKNGLYIRMALLE 396
V+MHPLPRLDEITVDVD DPRAAYFRQAK GLYIRMALL+
Sbjct: 361 VIMHPLPRLDEITVDVDADPRAAYFRQAKYGLYIRMALLK 385
BLAST of CmaCh16G009020 vs. ExPASy Swiss-Prot
Match: Q43087 (Aspartate carbamoyltransferase 2, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB2 PE=2 SV=1) HSP 1 Score: 529.3 bits (1362), Expect = 4.1e-149 Identity = 280/395 (70.89%), Postives = 328/395 (83.04%), Query Frame = 0
Query: 1 MAASSSLLTYSLQEHASTETAIKRCKGYMYGNLCSSYSRIGYSKTKFLTSAKFSHNENSS 60
M ASSSL + S+ T K K N S +S+I Y +T +L S + +
Sbjct: 1 MTASSSLFSCSMHMEVLTPKISKWPK-----NFVSCHSKISYVETNYLKSTCYPISRFFC 60
Query: 61 NWEHIQKSPMRNEILCRAVEIENSLSPFVSKKFELDDVIESQQFDREILNDIFDVAHDME 120
+++K+ R+ I C + +KF+LDDV+E+QQFDR+ILN IF+VA DME
Sbjct: 61 -INNLKKTRQRDGIHCFS----------EGQKFQLDDVVEAQQFDRDILNAIFEVARDME 120
Query: 121 KIEKSSSKSQMLKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGET 180
KIE++S +SQ+LKGYLMATLFYEPSTRTRLSFESAM+RLGGEVLTTENAREFSSAAKGET
Sbjct: 121 KIERNSPESQILKGYLMATLFYEPSTRTRLSFESAMRRLGGEVLTTENAREFSSAAKGET 180
Query: 181 LEDTIRTVEGYSDIIVMRHFESGAAKKAAATAGIPIINAGDGPGQHPTQALLDVYTIQRE 240
LEDTIRTVEGYSD+IV+RHFESGAA++AA AGIPI+NAGDGPGQHP+QALLDVYTI+RE
Sbjct: 181 LEDTIRTVEGYSDLIVLRHFESGAARRAATIAGIPIVNAGDGPGQHPSQALLDVYTIERE 240
Query: 241 IGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKEYLSSQGVK 300
IGKLDGIKVGLVGDLANGRTVRSL YLLAKY+DVKIYFVSP+VVKMKDDIK+YL+S+GV
Sbjct: 241 IGKLDGIKVGLVGDLANGRTVRSLTYLLAKYKDVKIYFVSPEVVKMKDDIKDYLTSKGVD 300
Query: 301 WEECENLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYIVDKNVLKVMQRHAVVMHP 360
WEE +L+EVASECDVVYQTRIQ+ERFGER+DLYE+ARGK+IV++N+L MQRHAV+MHP
Sbjct: 301 WEESSDLVEVASECDVVYQTRIQKERFGERLDLYEKARGKFIVNQNILNAMQRHAVIMHP 360
Query: 361 LPRLDEITVDVDEDPRAAYFRQAKNGLYIRMALLE 396
LPRLDEITVDVD DPRAAYFRQAK GLYIRMALL+
Sbjct: 361 LPRLDEITVDVDADPRAAYFRQAKYGLYIRMALLK 379
BLAST of CmaCh16G009020 vs. ExPASy Swiss-Prot
Match: Q43086 (Aspartate carbamoyltransferase 1, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB1 PE=2 SV=1) HSP 1 Score: 522.7 bits (1345), Expect = 3.8e-147 Identity = 264/327 (80.73%), Postives = 302/327 (92.35%), Query Frame = 0
Query: 71 RNEILCRAVEIENSLSPF--VSKKFELDDVIESQQFDREILNDIFDVAHDMEKIEKSSSK 130
++++LC A ++ +P V +KF+LDDVIE+QQFDRE L+ IF+VA ME I +SS
Sbjct: 54 KSKLLCGAGALQVESAPLFSVGQKFQLDDVIEAQQFDRETLSAIFEVARSMENIRGNSSG 113
Query: 131 SQMLKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTV 190
SQMLKGYLMATLFYEPSTRTRLSFESAMKRLGG+VLTTENAREFSSAAKGETLEDTIRTV
Sbjct: 114 SQMLKGYLMATLFYEPSTRTRLSFESAMKRLGGDVLTTENAREFSSAAKGETLEDTIRTV 173
Query: 191 EGYSDIIVMRHFESGAAKKAAATAGIPIINAGDGPGQHPTQALLDVYTIQREIGKLDGIK 250
EGYSDIIV+RHFESGAA++AAATA IP+INAGDGPGQHP+QALLDVYTI+REIGKLDGIK
Sbjct: 174 EGYSDIIVLRHFESGAARRAAATANIPVINAGDGPGQHPSQALLDVYTIEREIGKLDGIK 233
Query: 251 VGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKEYLSSQGVKWEECENLM 310
VGLVGDLANGRTVRSLAYLLAKY+DVK+YFVSP+VVKMKDDIKEYL+S+GV+WEE +LM
Sbjct: 234 VGLVGDLANGRTVRSLAYLLAKYRDVKLYFVSPNVVKMKDDIKEYLTSKGVEWEESSDLM 293
Query: 311 EVASECDVVYQTRIQRERFGERIDLYEQARGKYIVDKNVLKVMQRHAVVMHPLPRLDEIT 370
EVAS+CDVVYQTRIQ+ERFGE+++LYE+ARGKYIV+++VLKVMQ HAVVMHPLP+LDEI
Sbjct: 294 EVASKCDVVYQTRIQKERFGEKLNLYEEARGKYIVNQDVLKVMQNHAVVMHPLPKLDEIE 353
Query: 371 VDVDEDPRAAYFRQAKNGLYIRMALLE 396
DVD DPRAAYFRQAKNGLYIRMALL+
Sbjct: 354 ADVDNDPRAAYFRQAKNGLYIRMALLK 380
BLAST of CmaCh16G009020 vs. ExPASy Swiss-Prot
Match: P49077 (Aspartate carbamoyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PYRB PE=2 SV=2) HSP 1 Score: 521.5 bits (1342), Expect = 8.5e-147 Identity = 262/305 (85.90%), Postives = 289/305 (94.75%), Query Frame = 0
Query: 91 KKFELDDVIESQQFDREILNDIFDVAHDMEKIEKSSSKSQMLKGYLMATLFYEPSTRTRL 150
KKFEL DVIE +QFDRE+L+ IFDVA +MEKIEKSSS+S++LKGYLMATLFYEPSTRTRL
Sbjct: 80 KKFELSDVIEGKQFDREMLSAIFDVAREMEKIEKSSSQSEILKGYLMATLFYEPSTRTRL 139
Query: 151 SFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAAKKAAA 210
SFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAA+KAAA
Sbjct: 140 SFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAARKAAA 199
Query: 211 TAGIPIINAGDGPGQHPTQALLDVYTIQREIGKLDGIKVGLVGDLANGRTVRSLAYLLAK 270
TA IP+INAGDGPG+HPTQALLDVYTIQ EIGKLDGI V LVGDLANGRTVRSLAYLLAK
Sbjct: 200 TANIPVINAGDGPGEHPTQALLDVYTIQSEIGKLDGISVALVGDLANGRTVRSLAYLLAK 259
Query: 271 YQDVKIYFVSPDVVKMKDDIKEYLSSQGVKWEECENLMEVASECDVVYQTRIQRERFGER 330
++DVKIYFVSP++VKMKDDIK+YL+S GV+WEE +LMEVAS+CDVVYQTRIQRERFGER
Sbjct: 260 FKDVKIYFVSPEIVKMKDDIKDYLTSSGVEWEESSDLMEVASKCDVVYQTRIQRERFGER 319
Query: 331 IDLYEQARGKYIVDKNVLKVMQRHAVVMHPLPRLDEITVDVDEDPRAAYFRQAKNGLYIR 390
+DLYE ARGKYIVDK++L VMQ+ A++MHPLPRLDEIT DVD DPRAAYFRQAKNGL+IR
Sbjct: 320 LDLYEAARGKYIVDKDLLGVMQKKAIIMHPLPRLDEITADVDADPRAAYFRQAKNGLFIR 379
Query: 391 MALLE 396
MALL+
Sbjct: 380 MALLK 384
BLAST of CmaCh16G009020 vs. ExPASy Swiss-Prot
Match: Q9LD61 (Aspartate carbamoyltransferase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PYRB PE=2 SV=1) HSP 1 Score: 506.1 bits (1302), Expect = 3.7e-142 Identity = 256/330 (77.58%), Postives = 294/330 (89.09%), Query Frame = 0
Query: 71 RNEILCRAVEIENSLSPFVSKKFELDDVIESQQFDREILNDIFDVAHDMEKIEKSSS--- 130
R + C A S + V+ L DVIE+QQFDR+ L +IF+VA +ME +E+ SS
Sbjct: 32 RGAVACGA----GSAAAGVAASLRLGDVIEAQQFDRDALTEIFEVAREMEALERGSSSRG 91
Query: 131 --KSQMLKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTI 190
+S++L+GYLMATLFYEPSTRTRLSFE+AM+RLGGEVLTTENAREFSSAAKGETLEDTI
Sbjct: 92 AGRSRVLEGYLMATLFYEPSTRTRLSFEAAMRRLGGEVLTTENAREFSSAAKGETLEDTI 151
Query: 191 RTVEGYSDIIVMRHFESGAAKKAAATAGIPIINAGDGPGQHPTQALLDVYTIQREIGKLD 250
RTVEGYSDIIV+RHFESGAA++AAATA IP+INAGDGPGQHPTQALLDVY+I+REIG LD
Sbjct: 152 RTVEGYSDIIVLRHFESGAARRAAATADIPVINAGDGPGQHPTQALLDVYSIEREIGTLD 211
Query: 251 GIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKEYLSSQGVKWEECE 310
GIK+GLVGDLANGRTVRSLAYL+AKYQ++KIYFVSPDVVKMKDDIKEYL+SQGV+WEE
Sbjct: 212 GIKLGLVGDLANGRTVRSLAYLIAKYQNIKIYFVSPDVVKMKDDIKEYLTSQGVEWEESS 271
Query: 311 NLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYIVDKNVLKVMQRHAVVMHPLPRLD 370
+L+EVAS+CDV+YQTRIQ+ERFGERIDLYE ARGKYIVDK VL V+ +HAV+MHPLPRLD
Sbjct: 272 DLLEVASKCDVIYQTRIQKERFGERIDLYEAARGKYIVDKKVLDVLPKHAVIMHPLPRLD 331
Query: 371 EITVDVDEDPRAAYFRQAKNGLYIRMALLE 396
EIT+DVD DPRAAYFRQAKNGLYIRMALL+
Sbjct: 332 EITIDVDSDPRAAYFRQAKNGLYIRMALLK 357
BLAST of CmaCh16G009020 vs. TAIR 10
Match: AT3G20330.1 (PYRIMIDINE B ) HSP 1 Score: 521.5 bits (1342), Expect = 6.1e-148 Identity = 262/305 (85.90%), Postives = 289/305 (94.75%), Query Frame = 0
Query: 91 KKFELDDVIESQQFDREILNDIFDVAHDMEKIEKSSSKSQMLKGYLMATLFYEPSTRTRL 150
KKFEL DVIE +QFDRE+L+ IFDVA +MEKIEKSSS+S++LKGYLMATLFYEPSTRTRL
Sbjct: 80 KKFELSDVIEGKQFDREMLSAIFDVAREMEKIEKSSSQSEILKGYLMATLFYEPSTRTRL 139
Query: 151 SFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAAKKAAA 210
SFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAA+KAAA
Sbjct: 140 SFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAARKAAA 199
Query: 211 TAGIPIINAGDGPGQHPTQALLDVYTIQREIGKLDGIKVGLVGDLANGRTVRSLAYLLAK 270
TA IP+INAGDGPG+HPTQALLDVYTIQ EIGKLDGI V LVGDLANGRTVRSLAYLLAK
Sbjct: 200 TANIPVINAGDGPGEHPTQALLDVYTIQSEIGKLDGISVALVGDLANGRTVRSLAYLLAK 259
Query: 271 YQDVKIYFVSPDVVKMKDDIKEYLSSQGVKWEECENLMEVASECDVVYQTRIQRERFGER 330
++DVKIYFVSP++VKMKDDIK+YL+S GV+WEE +LMEVAS+CDVVYQTRIQRERFGER
Sbjct: 260 FKDVKIYFVSPEIVKMKDDIKDYLTSSGVEWEESSDLMEVASKCDVVYQTRIQRERFGER 319
Query: 331 IDLYEQARGKYIVDKNVLKVMQRHAVVMHPLPRLDEITVDVDEDPRAAYFRQAKNGLYIR 390
+DLYE ARGKYIVDK++L VMQ+ A++MHPLPRLDEIT DVD DPRAAYFRQAKNGL+IR
Sbjct: 320 LDLYEAARGKYIVDKDLLGVMQKKAIIMHPLPRLDEITADVDADPRAAYFRQAKNGLFIR 379
Query: 391 MALLE 396
MALL+
Sbjct: 380 MALLK 384
BLAST of CmaCh16G009020 vs. TAIR 10
Match: AT1G75330.1 (ornithine carbamoyltransferase ) HSP 1 Score: 96.7 bits (239), Expect = 4.8e-20 Identity = 94/335 (28.06%), Postives = 150/335 (44.78%), Query Frame = 0
Query: 71 RNEILCRAVEIENSLSPF-VSKKFELDDVIESQQFDREILNDIFDVAHDMEKIEKSSSKS 130
R + C+A + + SP V K +L D + FD + I D A +++ + KS ++
Sbjct: 47 RLRVSCQASSVTSPSSPSDVKGKSDLKDFLAIDDFDTATIKTILDKASEVKALLKSGERN 106
Query: 131 QM-LKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTV 190
+ KG M+ +F +PS RTR+SFE+ LGG L K E D R +
Sbjct: 107 YLPFKGKSMSMIFAKPSMRTRVSFETGFFLLGGHALYL--GPNDIQMGKREETRDVARVL 166
Query: 191 EGYSDIIVMRHFESGAAKKAAATAGIPIINAGDGPGQHPTQALLDVYTIQREIGKLDGIK 250
Y+DII+ R F A + +P++N G HP Q + D T+ IG+++G K
Sbjct: 167 SRYNDIIMARVFAHQDILDLANYSSVPVVN-GLTDHNHPCQIMADALTMIEHIGQVEGTK 226
Query: 251 VGLVGDLANGRTVRSLAYLLAKYQDVKIYFV-------SPDVVKMKDDIKEYLSSQGVKW 310
V VGD V S L + + +FV PD K+ + + + K
Sbjct: 227 VVYVGD--GNNMVHSWLELASV---IPFHFVCACPKGYEPD----KERVSKAKQAGLSKI 286
Query: 311 EECENLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYIVDKNVLKVMQRHAVVMHPL 370
E + E DVVY + + +A + VD+ ++K+ + A MH L
Sbjct: 287 EITNDPKEAVIGADVVYSDVWASMGQKDEAEARRKAFQGFQVDEALMKLAGQKAYFMHCL 346
Query: 371 P--RLDEITVDVDEDPRAAYFRQAKNGLYIRMALL 395
P R E+T V E P + F QA+N ++ + A++
Sbjct: 347 PAERGVEVTNGVVEAPYSIVFPQAENRMHAQNAIM 369
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q43064 | 2.8e-150 | 70.75 | Aspartate carbamoyltransferase 3, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB... | [more] |
| Q43087 | 4.1e-149 | 70.89 | Aspartate carbamoyltransferase 2, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB... | [more] |
| Q43086 | 3.8e-147 | 80.73 | Aspartate carbamoyltransferase 1, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB... | [more] |
| P49077 | 8.5e-147 | 85.90 | Aspartate carbamoyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... | [more] |
| Q9LD61 | 3.7e-142 | 77.58 | Aspartate carbamoyltransferase, chloroplastic OS=Oryza sativa subsp. japonica OX... | [more] |
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PRINTS | PR00101 | ATCASE | coord: 131..153
score: 60.65
coord: 379..393
score: 62.05
coord: 171..180
score: 61.03
coord: 357..362
score: 79.06
coord: 225..242
score: 65.1
coord: 317..326
score: 64.36 |
| None | No IPR available | PANTHER | PTHR11405:SF52 | ASPARTATE CARBAMOYLTRANSFERASE, CATALYTIC CHAIN | coord: 1..395 |
| None | No IPR available | PANTHER | PTHR11405 | CARBAMOYLTRANSFERASE FAMILY MEMBER | coord: 1..395 |
| IPR006130 | Aspartate/ornithine carbamoyltransferase | PRINTS | PR00100 | AOTCASE | coord: 141..160
score: 64.87
coord: 226..237
score: 68.29
coord: 353..362
score: 48.57
coord: 363..386
score: 43.24 |
| IPR006130 | Aspartate/ornithine carbamoyltransferase | PROSITE | PS00097 | CARBAMOYLTRANSFERASE | coord: 141..148 |
| IPR006132 | Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding | PFAM | PF02729 | OTCace_N | coord: 98..238
e-value: 2.1E-45
score: 154.4 |
| IPR036901 | Aspartate/ornithine carbamoyltransferase superfamily | GENE3D | 3.40.50.1370 | Aspartate/ornithine carbamoyltransferase | coord: 226..385
e-value: 5.2E-109
score: 366.0 |
| IPR036901 | Aspartate/ornithine carbamoyltransferase superfamily | GENE3D | 3.40.50.1370 | Aspartate/ornithine carbamoyltransferase | coord: 98..394
e-value: 5.2E-109
score: 366.0 |
| IPR036901 | Aspartate/ornithine carbamoyltransferase superfamily | SUPERFAMILY | 53671 | Aspartate/ornithine carbamoyltransferase | coord: 95..396 |
| IPR006131 | Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain | PFAM | PF00185 | OTCace | coord: 245..395
e-value: 4.6E-33
score: 114.5 |
| IPR002082 | Aspartate carbamoyltransferase | TIGRFAM | TIGR00670 | TIGR00670 | coord: 97..396
e-value: 4.7E-106
score: 352.3 |
| IPR002082 | Aspartate carbamoyltransferase | HAMAP | MF_00001 | Asp_carb_tr | coord: 95..400
score: 35.13829 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006520 |
cellular amino acid metabolic process |
| biological_process |
GO:0016036 |
cellular response to phosphate starvation |
| biological_process |
GO:0006207 |
'de novo' pyrimidine nucleobase biosynthetic process |
| biological_process |
GO:0044205 |
'de novo' UMP biosynthetic process |
| cellular_component |
GO:0005829 |
cytosol |
| molecular_function |
GO:0016597 |
amino acid binding |
| molecular_function |
GO:0004070 |
aspartate carbamoyltransferase activity |
| molecular_function |
GO:0016743 |
carboxyl- or carbamoyltransferase activity |
|
