CmaCh16G008620 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G008620
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	polyadenylate-binding protein-interacting protein 4-like
Location	Cma_Chr16: 5120756 .. 5129805 (+)
RNA-Seq Expression	CmaCh16G008620
Synteny	CmaCh16G008620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTCCTGTCATAGTTCAATGCAGTCAACGATCGACATGGCCCCTTCTCATGGTTCAGAATCCAATAAAAATGGCAAGGTATGTCGTATCCTTGTCAGTTTATCACATTACTACTATAATTAATAGATAGAATGTTCATGGGACATTTATCATGTTATATTTATACCTTAATATCTTTTCCATTGTTCTCAGCCAAAATCCCCTCAGATTAGTACAATCCCTTGAGTTAAAGAACTTTTTAATTTTCACCTTTTCTTTTAAAAAAATGTATTTATTGATATAAAATTTTATTGGATGGACGAAATACAAGCCAAAAGCTTACAGAAATTATGGGAGTTACTAAACGCTCTCCGGTCGGCACAAATCAAAGAAAAGCCATTGATGCAAAAGTCAGCTGCAGAAAATACCCATACTAGTAAAAAAACAAGGTTTAAATATACAGAAAGTTTGCCAATGATAAGACCAATTAAAAAGTTTGAGAAATTTCCTCCTCAATTTCTTACATAAAGGTACCAAAGGAAGAGGTAGTCGCCAATTCATCCTCTCTTTTACATATCACACACCAACTTGTCAAGATAAATTATTCTGTGGTCGAATCTAATTTGGATACCCAAACCTTCGAGAAGATGAGATCCACAAGCATCTTGAGGTTACAGACTTGAGTAAACAATTTGTATCACTACAATTGACTTCCAAGGGCTTTTCATGGTAGACAATGCTACTCATTGAGGACGATGCTACTCATTGAGTCAGAAACCCTTAGACGTTGAGTAGAGTTGCTAGTATTGATTAAGGAAGATGCCACTCACTGTTTACATCCAAAACCATCCAAAACCATCAGCCACTTCTTTTCCATTAAGGATTTTTTTTTAGTTCCATAGGAGATTCGACTCTATGACCTCTTGGCTGAAAGTGTGTACCTAACTGCTATTCTCAGGTTGGCCCAACTACCATAAGAATTAATTTTGAAGAGATTTCTGATCATTATAGGATCTTCCGATTAGCCAAAGAGAAAGGGAGTGTAATCAAAGAACTGAAGGTGATTGAACTAATTATCTTCTTATCCACTCGTAAAACTCTAAAATGGCAACATAGAGGAATACAGGAATATGGTTGGAAAGTTGGGCACTTTCCATGCGATAGGGAGGATGTAGGTATAGGCAACCCACAAGGCTAGGACTTTGTAATTATCCATAATATATTTTTATTTTTTGAAATCTTTGAAGAATCTGACCATATCTCAATCAGATCATCTATTGAAAAATTGATGAAAAGGAAGAACACTCTAGAGGAAAATTTGATTATGCTGATGTGAAGAGGTAGTGTACAAGAGAAGGTGAAAATTTTACTGTGGAGTTGTTTATTTGAATCATTAAATGCCTGCTTCAGATAAGTTACAGAATGCCAAATTGGCTCCTTCTTTAGACTGGTGCGTGAGTTTAAATTCAAGATGCTGGTGTTCAATTCTGAATCGCCAATATGTTGGATAGGGTTTTCATAAATCCATGAAGGAATTTGCAGTGAATGGCAGGGGTTTTGGGGAAGACCTATTTAAATCAAGGCTATGGAAAAATATCTGGATGGAAGGGAACTACATAATTTTTTCTAAATAGGGAAATAAAATGGGAGGGCGTATTTGAAAGGGATGCTCTTTACACTAATGATATTATATCCCTTCTGTAATTAACTTAATTATAGAGCGTTCTGTTTTGTTTTTTTTTTTTTCAAGGTGTTCTACTCTTCAGGACTTTTCACTATATCTGTATAAAGTTATTTATGTTTTTCTTAACCAGAAACAAAATTTTCATTTGATATATGAAAAGAAATAAAAGATTTGGGGAAACAAACTCCCATAGGAAGTGTAAAGAACAAGCAACCATACCAAAAAGAAAGGAACTTCCAAAAATATAAGAAACCAAATAATACAATGAAGAACAAAGCGCCCAATGGAGAAACAGACACAATCCCTGAAGCAAAAACCATGTCACTGAAGAGCCACTAAAGCTAGGCCTGAAAAAGCATATTCGGCAACTAAACCACTGCATATGGTACAAAGGCTCGAATAGAGAACTACAAAAAATCTAGCTATGAAGACTGCTTCAACTCCCAAACAAACGAGAAAAATTCGAAAGCAATCTTGTTTCTGTTTTTAAAGAATGGAATATCTTCAATGAAAAATCCTGTATGTTGTTAGGTTTGCCCCAATGAAGACCAAAACTTTTGATGAAGCCATAAGGGGAGAAAGGCCCAATGAGGAGGCTGTTAGAGGACTCTGTCATTTGTATTAATTAAATGGAGAGAGAGTAATAAATTGAAAAATCTGATCTCATGAGGAACTGTCTCCAAATGCTATTGGCCGGATGTGGAGGAAAAATCCTTTGCTAGTTCAGAGCAGCGCCCAATACACCCGCAACTCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAATCCTTGGAAAAAGAGGATGAATCGAAATATAGCTGATTTGTGTTCAGTCGCTCCTCTTTTGTCTGGAATTTGATACCCTATTGCGAGAGTTTACAAGTACGCAAGTGAGGGAGGGTAGGGACACATGAGGAGGTGTGCTTGAATGATTTGCCTAAGGGATCTTTTTTCAGTTAGAAGAGGGTAGGTGTAACGCTCCTAATTTTCTTGCCTAAACTAGAGACGTCATTATATGCATGCTTTTAATAACATATGCAGAAATTTAAATAAAACGTTTCAAATGAAGCCGTGGACTTACACATTTAATTTAAAACAAGAAAAGAAAAATAACAGTCATTTAACATGAAAAATGAAATAAACTACCTATCAATTACTAAATGAAATTTAATGCATACTATTGGCCTATCTTGACTTCTATGACCATTCCATCATTCACCGTCATCCGTGCAGGGGTGCATTACCTTTACCTGAAAAATATAAGGGTAGCATGTGGCTCGAGTATTTTAAGAAATACTCAGTAAGTCACCCATTGTTGGGCTAGTAATGGAATCACACACATATAATGATGGGACCTATCCTTTAAAACCGTAACATGATCTTGGACACTTTTTAATTTCGAACAGGATTCGATGTGTAGTGTTTTCCCACACACACAGACTTGCACGCGCACATGGACCCACTAGCAGGCTCATATACATACCCCTGGGTTTGGCTTGGTTGGGCACAACGTGTTAACACGTCGTCCGATGCCACCAAAAAAGAAAGGTCCGAAGATATCATGGCGAACATAAATATCGATGGTACGCATCCGTACTAACATAACATAACTGGGAAGTATCCCGATGCATATGACATACATATATGCATGAGATCCTCACGATTTACATTCATAGCATTGCATTAACATCACTCCCTTTCTCCTTTCATCCATGACATATTACATATATGCATCATGTATACATGACAATCATCACATAATCCATCACATATTTTTTCCTGGGAAGACATAACATGACATAGACAATTCTTTTCTATTCTAATTAGTATTAGATTAGTATTAGTTAGTGATCTCGGCTTAGTGAGTCCTTTCTTCTGTGATGAACTGTTGGCACCAGTCCTCCATTTTGTCTCCGTGGATTGAGGAGAAAGGGTGCTCGGCGTCAAGAGGATTGTAACATGAGAAAAGCAAGGAGGTCAACCTCTTTCAGATATGCAAGATGGATTCTGTAAAGGATTGTAACCGGAGAGAAGAGGATTGTAACATGTTAGAAGAGGGTAGGTCAACTTCATTTCATTCACAACATGTAATGGATTTCATTCACCTAATTACCACGTGTGTATCCCTTCACTACTTTTAGTGTTTTTTCCTTGATCATCTTTTCCTTTTCATACAAATTCATCATCAATTACACACTTGCCCTTATCCATTGGTGTTTTTTTGTGATGAAGGGAATCCCCTCTCAGTGTTTATCTACATTTCCATTAGAGAAATCACCCTCGGAATTCACTGCTTTGATACAAAAATTAATAGGCCTTGCTCAACCATTTACTTAATAACCAGAAAGGTAGCAAGGATAGTTTAGAGAGCTTCCCACCTCTCCCCATTCTCATAGAGAATAGCCAAAAAAGCCATTAGCGAAAAGATACCCCTTCCTCAAGCATACAACTATATGCTCTATTTCCCGTGCCTCTTTTCCAACTAACAAAATCCCTTGGACCCACATAACCATCCAAGCACACCCTCTTCACGTACCCATGCCCCTCTTCTAACTAACAAAATTCCTTGGGTCTACAGTCATTCGAGCAAACCCTCCTCATGTACCCCTTCTCTCCCTCCCGCACCTACGTGTATAGACTCTCATAATAAGGGGTCTATAGAATTTACAGTCATAATTACTTTGGGCAGGAGGAAAGTCCTGAAGAATGACGAGGGTTAACCGTTCTTGATAAAGATCACGGTGTTTCAAATGTTCAAACTGGACCTATTACACGATTCAAGGCCATGAAAATTCAACAAACATTCATTCTTCATCTACAAAATTGGATAGGCTCAATTCAACCATTATTTCATGTGTTACAAACTGATTCGACTGAGGAAGGACCATTTGAAGCTTTGGAAGTGAATATTTGCACGGTTGAAGTAGCGAATGATGGTGCGATAAATTGCACTTGATTGATAAGTTATTAGAAAGCTTTATTTATTATTTTTAACCATAAAGAAAAGAAGCTATCATATATATATCCCATTGAAGTTGGGTTCATAATTTCTTGTTGTGGGCAAAAGGGTGGGGGAAGTTATTTGTGAAAGTGACTCCTTTTTTTTTTTTTTTTTTTTTTTGGAGATTAAAAGGGAGTGGAAGTAAATTATGGCCACTAACTTCTTTAGTGGACATTTGAGAGTTCAAAGTTTCTTTTGTGGAGACTATAAATACCTATAAGACAGATTTTAGAGGAATGAAATTGAGCTCTCAAATTGAGACTTTCACCTTTAGAATTTGATCATCATCTTTTCCATTTCTAAATTTTAAGCAAGTTTTTTTTGTAGTAGATTGCATCTGAGCCCTTCAATCAAACCTTAATCAAGTTCGATTGTGGAGTGACTCAATTTAGAACAAAGTTTCAAATCTTGTTTCTAGATATTTGATCTTAAGAGTAATCTAATTCTAGCCTTATCTCTTGGTTGATCCAAATTTTGTATAAGGAGGTGTTAATTTCTTGGATCATTGGGCTGATAAGGCCTAATCCTCAGCCTAACGATCCAAACTTTTGATGAAGCAAGAACCATTGAATCAAAGAAATTAACACTTGGATCAACCAAAAGATAAGACTAGAATTAGATTATCTCTTAAGATCAAAGATCTAGAAGCAAGATTTGGAACCTTGTTCTAAATTGAGTTACTCCACAATCGTACTTGTTCAAGATTTTATTGAATGACTTAGATGCAATCTACTACAAGAATTGGTTGAAACTTAGAAATGGCAAAGATGATGCTCAAATTCTAAGGGTGAAAGTCTCAATTTGAGAACTCAATTTCATTCCTCTAAAATCTGACTTTTATATAGTAATTTGTGAGTATTTATAGTCTCCCACACAAAAAAGAAACTTTGTACTCTTCAAATGCCCACTAAAAAAGTCTTTGGCCAGAAATTATGAAATTAAAAATAATAAATAAAGTTTTCTAACAATTTATCTCAGTGCAATTTATAGTAACTTCATCTGCTACTCTTCAACCATGCAAATATTCACTTTCGAGACTCCAGATTGTTCTTCCTCAATTGAATCCGCTTGTAACACATGAAATAATGGTTGAACCGAGTCTATCCAATTTTGTAGGTGAAGAATGAATGCTTGTTGAATCTTCTTGGCCTTGGATCGTGTAATAGGTCCAGTTGGAACATTTGCAACAGTCTATCCAATTTTGTAGGTGAAGAATGAATGCTTGTTGAATCTTCTTGGCCTTGGATCGTGTAATAGGTCCAGTTGGAACATTTGCAACACCATCATCCTTATCAGTTCCTCAAGGAACCACTTTGGGCAGGAGGAAAACCATGTTGGCTTTATAGTACTGTTACTGCTGTTTGCATGTCTGAACAGCTTAGAAAATTGGTAAACTAGCATCCTCTCCGTGAGTCCTTAGATCAACCTTGCTTCCTTCATCGGTCCTCATGAAATGTAGGCTGAGTGAAGGCATTTTTCCTATGGAATGTTGCACCGTGGACTTGTGCTACTAACCTACCGAACGTTGGTGTAGTTGCTGGTTGAATTGCCATAAGTTACTGGTTTCAAAGGATCTCTATATAGCCTCTGGAATAATTAGCTACGTATTTCCTTCTGACATCACTTCCAGTCCACCAAACTGATTAGGATGGGCAACATTTTCCCATCCAACAAGATGATTCCTCTCGTTTTCTTGACAAAGGATCTATCGGTTACTTTTTTTTTTTTTCTTATTAAAAAAAACAGATATTCAGTCATAGATCCTGGTTTTTAAGGGTCTTCAAGAGGAAAGGTAGAAATGGGTAATTAGCGAGGACAAATTCAACTGAGGTAAGTTTCTTTCCCTTCGAAATATGAGATTTGGATCAACAACAGTGTTGAAATTTGGATAAACTTTCCGTCTTTTTCATACATCTTAATGAAACATTTTCGACGTGAGGTAGGTTGTATGTGTTTTATGGACGGTTTATTACCTGTTGCAACGGCCTTTGTACATGTATGTTAAAGTGATGAACACAGATTGAAGACTTTTGTAAGGTCGCAAAGTTATAATTGATATTTCTTCTCCGATAACTAATGAAATAATTCTTCTATTTTATACTTCTGCAGGAATTCAAGCTCAATCCAAGAGCCAAACTCTTCTATCCATCCGTTGCAAATAACATGTCAGCAACCCCTGCAGCTCCAGTGTCTTACATTTCAAACAACACGCCAGTACTACATGTACCTGTTGCACAACCAGAGGTGGTGTTCAGTCCTTTGTACCTCGTTCACCTGGGCCTGCCGCCAAGTTTGTCCCAAATGACAACTCAATATCTGGGTTTGGTGGCAACGTTGCTCAATTTTCCCAACCTGTACGCATTGTTTGGGCAGGTTTCTCTTGATCGGTTTTCCTTTGTTATTCTTATCAAACTATCTATTTGGCCTTATGGGGGTCAAGTTCTTCTAATAGTTGTGTCTCCATTTCACAACCAAAATGAACAAAAGCTAAAACTAAAGTCGGAATATATAATTCCAGTGTTTCAGCTGCATCTAGGTCTTCCTTCCCTAGTTTGAGAAGGCAATTTTAGATCTCATTTATAAGACCATGTACTGTATCTTGGGTAACAGAGATTCAATGATAGGTGAGTATTAAAATCTGAAACTTGTACTTGGCTAATCCCCCAGGATTTTTTAAGGTGTTTCTTGGTTTCAATATGGTTATATCAAATGAATTTTATTGTTCATAAGAAAACATCGGTTTGAAGTGTATCCCAGAAGGAAAAAAAAAAAAAAAAAAAGAGTTGTATGTAGGGTTTTCCTTGAATCTTTCGATTGGAATTTCCAATGATAATTTGGTTGGCTAGGGATGCATGATGATCATGCAAACAGTTTTTATACCGCTCTCTATTACAACAAGACGCAAGTAACTGTCGCATGTAGTAATTTTGTTTATTACTTATAAACTAATCTCAGTAGGATCCTCTTTGCTGGTAATGGTAAAAGCATTTTCAAACTTTCAGTGCAACTGTAGTAATAAACTTCATTCCTACAAATTTGCTGTCCGAGTTTTCAACCTCTATCTTTCCTACAGATGGTGGGACATGTGGGAACCAGGACGCAGCCACTAAGATATGTTGGTCAGTATCCTTTCCAGGCTGCCCCGACCTTTGGGCCCCCAAATTCTCCAGCAGTAAGTGGAAACATGATTATATTTGTTCTTTCAATTTAGTTCCTCCTGGTTGCAATTTTAGTTGGCAGATTAGAATGTACTTTAATTCATTCATGACCAGCTGATAATATATGTGTTGAAAACCTCTGCACCTCCCCTATTGTGCTACAGGTTATGGTCGGTCGTCTTGGGCAACTTGTTTATATGCAGCCACTCTCCCATGTAAGCATTTAGTGACCCCATTTATCTGAAGTATAAGCCATCCTTCCACAAATTCTATTGCTTCCTTGAATTATTTTACCTTGTAGAATTGATCTCTCTTCACTTTATGTTTCTTGACGCCATGAGCAGCAGTTAAATAGTTGTGAATTGTGAACTTGAAGGATGTATATGTTCTGTTTTGATAATTAAATCTATATGTTTGAAGTTCTTTGGTTTTTTCTGAGGTCAATTCATCATCTAGTCTGTTTTCATGATGTTGCTTCTCCCTTTGACTCTGAATTACCTAGTTTCCTTGTCTCATATTTCAGGACTTGGCTCAAGGTACGACAATCATCTCACCGATACCACCTTGCCCTTTGTTGACAACACAGCCTGTTCAATATCCGAAACATCAAGGTGAAATTCTTGTTCCTGGCTAATGCCTGAGCATTCCTGTATCGGTCCGCCACCCCTACTAGATATTGTCATCTTTGAGCTTTCCTCTCGAGCTTCCCCTCGAGGCTTAAAGGTGTTTCATTCTCCTCCTCAACCGATGTGGGATCTCACAATTCCCTTTTCATCACCCAACTTTTCATCTTAACGTCCTCGACCAATGCAGGAACTGCAGCAACACAAGCATTGCAGCTTTGTGTTCCAGAGCCATTCATGGCCAGTGGACACCAACCGCTTGCCGCAGCGCCAAAGGTCATTCCAGCTTTGCAGCCATCCTTCCCACTCAACCACCCAATGCAACTGCCAGAAGCTAATTCATTCTTCAACGCCAAGTTCTAATGAATTTGCTTCTTTTGTTAATTCTCCATGTAGTCAACCCCAAGGTTTTAGCAAAATTTTGATCCTCTTAAAAGTTATTTTCCCAATTTGTATTAATTATTAGCATTTTTCTTTTTATTGGATTGTTTCCATTCAAATCAAGACAGTTTACCTTCGATTGGTGGATGGGGCCTGATGAACTATGTATAGGTTGAATTAAAATTTGTTTAGGATAAGCATTATTTCTAGGGAGGGA

mRNA sequence

ATGAACTCCTGTCATAGTTCAATGCAGTCAACGATCGACATGGCCCCTTCTCATGGTTCAGAATCCAATAAAAATGGCAAGGAATTCAAGCTCAATCCAAGAGCCAAACTCTTCTATCCATCCGTTGCAAATAACATGTCAGCAACCCCTGCAGCTCCAGTGTCTTACATTTCAAACAACACGCCAGTACTACATGTACCTGTTGCACAACCAGAGGTGGTGTTCAGTCCTTTGTACCTCGTTCACCTGGGCCTGCCGCCAAGTTTGTCCCAAATGACAACTCAATATCTGGGTTTGGTGGCAACGTTGCTCAATTTTCCCAACCTGTACGCATTGTTTGGGCAGATGGTGGGACATGTGGGAACCAGGACGCAGCCACTAAGATATGTTGGTCAGTATCCTTTCCAGGCTGCCCCGACCTTTGGGCCCCCAAATTCTCCAGCAGTTATGGTCGGTCGTCTTGGGCAACTTGTTTATATGCAGCCACTCTCCCATGACTTGGCTCAAGGTACGACAATCATCTCACCGATACCACCTTGCCCTTTGTTGACAACACAGCCTGTTCAATATCCGAAACATCAAGGAACTGCAGCAACACAAGCATTGCAGCTTTGTGTTCCAGAGCCATTCATGGCCAGTGGACACCAACCGCTTGCCGCAGCGCCAAAGGTCATTCCAGCTTTGCAGCCATCCTTCCCACTCAACCACCCAATGCAACTGCCAGAAGCTAATTCATTCTTCAACGCCAAGTTCTAATGAATTTGCTTCTTTTGTTAATTCTCCATGTAGTCAACCCCAAGGTTTTAGCAAAATTTTGATCCTCTTAAAAGTTATTTTCCCAATTTGTATTAATTATTAGCATTTTTCTTTTTATTGGATTGTTTCCATTCAAATCAAGACAGTTTACCTTCGATTGGTGGATGGGGCCTGATGAACTATGTATAGGTTGAATTAAAATTTGTTTAGGATAAGCATTATTTCTAGGGAGGGA

Coding sequence (CDS)

ATGAACTCCTGTCATAGTTCAATGCAGTCAACGATCGACATGGCCCCTTCTCATGGTTCAGAATCCAATAAAAATGGCAAGGAATTCAAGCTCAATCCAAGAGCCAAACTCTTCTATCCATCCGTTGCAAATAACATGTCAGCAACCCCTGCAGCTCCAGTGTCTTACATTTCAAACAACACGCCAGTACTACATGTACCTGTTGCACAACCAGAGGTGGTGTTCAGTCCTTTGTACCTCGTTCACCTGGGCCTGCCGCCAAGTTTGTCCCAAATGACAACTCAATATCTGGGTTTGGTGGCAACGTTGCTCAATTTTCCCAACCTGTACGCATTGTTTGGGCAGATGGTGGGACATGTGGGAACCAGGACGCAGCCACTAAGATATGTTGGTCAGTATCCTTTCCAGGCTGCCCCGACCTTTGGGCCCCCAAATTCTCCAGCAGTTATGGTCGGTCGTCTTGGGCAACTTGTTTATATGCAGCCACTCTCCCATGACTTGGCTCAAGGTACGACAATCATCTCACCGATACCACCTTGCCCTTTGTTGACAACACAGCCTGTTCAATATCCGAAACATCAAGGAACTGCAGCAACACAAGCATTGCAGCTTTGTGTTCCAGAGCCATTCATGGCCAGTGGACACCAACCGCTTGCCGCAGCGCCAAAGGTCATTCCAGCTTTGCAGCCATCCTTCCCACTCAACCACCCAATGCAACTGCCAGAAGCTAATTCATTCTTCAACGCCAAGTTCTAA

Protein sequence

MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAPVSYISNNTPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQMVGHVGTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIISPIPPCPLLTTQPVQYPKHQGTAATQALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQLPEANSFFNAKF

Homology

[Close]

BLAST of CmaCh16G008620 vs. ExPASy TrEMBL
Match: A0A6J1JD44 (uncharacterized protein LOC111483301 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483301 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 1.8e-139
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAPVSYISNN 60
           MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAPVSYISNN
Sbjct: 1   MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAPVSYISNN 60

Query: 61  TPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQMVGHV 120
           TPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQMVGHV
Sbjct: 61  TPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQMVGHV 120

Query: 121 GTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIISPIPPC 180
           GTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIISPIPPC
Sbjct: 121 GTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIISPIPPC 180

Query: 181 PLLTTQPVQYPKHQGTAATQALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQL 240
           PLLTTQPVQYPKHQGTAATQALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQL
Sbjct: 181 PLLTTQPVQYPKHQGTAATQALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQL 240

Query: 241 PEANSFFNAKF 252
           PEANSFFNAKF
Sbjct: 241 PEANSFFNAKF 251

[Close]

BLAST of CmaCh16G008620 vs. ExPASy TrEMBL
Match: A0A6J1JD48 (uncharacterized protein LOC111483301 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483301 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.7e-101
Identity = 201/251 (80.08%), Postives = 201/251 (80.08%), Query Frame = 0


Query: 1   MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAPVSYISNN 60
           MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAPVSYISNN
Sbjct: 1   MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAPVSYISNN 60

Query: 61  TPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQMVGHV 120
           TPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQ     
Sbjct: 61  TPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQ----- 120

Query: 121 GTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIISPIPPC 180
                                                        DLAQGTTIISPIPPC
Sbjct: 121 ---------------------------------------------DLAQGTTIISPIPPC 180

Query: 181 PLLTTQPVQYPKHQGTAATQALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQL 240
           PLLTTQPVQYPKHQGTAATQALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQL
Sbjct: 181 PLLTTQPVQYPKHQGTAATQALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQL 201

Query: 241 PEANSFFNAKF 252
           PEANSFFNAKF
Sbjct: 241 PEANSFFNAKF 201

[Close]

BLAST of CmaCh16G008620 vs. ExPASy TrEMBL
Match: A0A6J1DB05 (uncharacterized protein LOC111019035 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019035 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 6.2e-87
Identity = 174/257 (67.70%), Postives = 202/257 (78.60%), Query Frame = 0


Query: 1   MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAP----VSY 60
           M+SCHSS+ STID+A  HGSESNK+ KEFKLNPRAKLF PSVANNM+A+PA P    V+Y
Sbjct: 281 MDSCHSSITSTIDVASPHGSESNKSSKEFKLNPRAKLFSPSVANNMTASPATPVVANVAY 340

Query: 61  ISNNTPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQ- 120
           ISN++PV+ V VAQPEV FSP ++    +PP+      +++    ++  F    A F Q 
Sbjct: 341 ISNSSPVVPVAVAQPEVEFSP-FVPRSSVPPA------KFVPYGNSIAGFGGNVAQFSQP 400

Query: 121 MVGHVGTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIIS 180
           MVGHVGTRTQPLRYVGQYP QA PTFGPPNS AVMVGR GQLVY+ P+SHDLAQGTT++S
Sbjct: 401 MVGHVGTRTQPLRYVGQYPLQAGPTFGPPNSQAVMVGRFGQLVYVHPVSHDLAQGTTVVS 460

Query: 181 PIPPCPLLTTQPVQYPKHQGTAAT-QALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPL 240
           P+ PCPLLTTQP QYPKHQGTAA  QALQ CVP PFMASGHQPLAA P  IP LQPSFPL
Sbjct: 461 PVSPCPLLTTQPAQYPKHQGTAAAQQALQFCVPPPFMASGHQPLAAVPNHIPILQPSFPL 520

Query: 241 NHPMQLPEANSFFNAKF 252
           N PMQ+P +N+FF+ KF
Sbjct: 521 NRPMQMPGSNAFFSTKF 530

[Close]

BLAST of CmaCh16G008620 vs. ExPASy TrEMBL
Match: A0A6J1DBR8 (uncharacterized protein LOC111019035 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019035 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 6.2e-87
Identity = 174/257 (67.70%), Postives = 202/257 (78.60%), Query Frame = 0


Query: 1   MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAP----VSY 60
           M+SCHSS+ STID+A  HGSESNK+ KEFKLNPRAKLF PSVANNM+A+PA P    V+Y
Sbjct: 280 MDSCHSSITSTIDVASPHGSESNKSSKEFKLNPRAKLFSPSVANNMTASPATPVVANVAY 339

Query: 61  ISNNTPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQ- 120
           ISN++PV+ V VAQPEV FSP ++    +PP+      +++    ++  F    A F Q 
Sbjct: 340 ISNSSPVVPVAVAQPEVEFSP-FVPRSSVPPA------KFVPYGNSIAGFGGNVAQFSQP 399

Query: 121 MVGHVGTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIIS 180
           MVGHVGTRTQPLRYVGQYP QA PTFGPPNS AVMVGR GQLVY+ P+SHDLAQGTT++S
Sbjct: 400 MVGHVGTRTQPLRYVGQYPLQAGPTFGPPNSQAVMVGRFGQLVYVHPVSHDLAQGTTVVS 459

Query: 181 PIPPCPLLTTQPVQYPKHQGTAAT-QALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPL 240
           P+ PCPLLTTQP QYPKHQGTAA  QALQ CVP PFMASGHQPLAA P  IP LQPSFPL
Sbjct: 460 PVSPCPLLTTQPAQYPKHQGTAAAQQALQFCVPPPFMASGHQPLAAVPNHIPILQPSFPL 519

Query: 241 NHPMQLPEANSFFNAKF 252
           N PMQ+P +N+FF+ KF
Sbjct: 520 NRPMQMPGSNAFFSTKF 529

[Close]

BLAST of CmaCh16G008620 vs. ExPASy TrEMBL
Match: A0A6J1DA25 (uncharacterized protein LOC111019035 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111019035 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 6.2e-87
Identity = 174/257 (67.70%), Postives = 202/257 (78.60%), Query Frame = 0


Query: 1   MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAP----VSY 60
           M+SCHSS+ STID+A  HGSESNK+ KEFKLNPRAKLF PSVANNM+A+PA P    V+Y
Sbjct: 218 MDSCHSSITSTIDVASPHGSESNKSSKEFKLNPRAKLFSPSVANNMTASPATPVVANVAY 277

Query: 61  ISNNTPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQ- 120
           ISN++PV+ V VAQPEV FSP ++    +PP+      +++    ++  F    A F Q 
Sbjct: 278 ISNSSPVVPVAVAQPEVEFSP-FVPRSSVPPA------KFVPYGNSIAGFGGNVAQFSQP 337

Query: 121 MVGHVGTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIIS 180
           MVGHVGTRTQPLRYVGQYP QA PTFGPPNS AVMVGR GQLVY+ P+SHDLAQGTT++S
Sbjct: 338 MVGHVGTRTQPLRYVGQYPLQAGPTFGPPNSQAVMVGRFGQLVYVHPVSHDLAQGTTVVS 397

Query: 181 PIPPCPLLTTQPVQYPKHQGTAAT-QALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPL 240
           P+ PCPLLTTQP QYPKHQGTAA  QALQ CVP PFMASGHQPLAA P  IP LQPSFPL
Sbjct: 398 PVSPCPLLTTQPAQYPKHQGTAAAQQALQFCVPPPFMASGHQPLAAVPNHIPILQPSFPL 457

Query: 241 NHPMQLPEANSFFNAKF 252
           N PMQ+P +N+FF+ KF
Sbjct: 458 NRPMQMPGSNAFFSTKF 467

[Close]

BLAST of CmaCh16G008620 vs. NCBI nr
Match: XP_022985253.1 (uncharacterized protein LOC111483301 isoform X1 [Cucurbita maxima] >XP_022985254.1 uncharacterized protein LOC111483301 isoform X1 [Cucurbita maxima] >XP_022985255.1 uncharacterized protein LOC111483301 isoform X1 [Cucurbita maxima] >XP_022985256.1 uncharacterized protein LOC111483301 isoform X1 [Cucurbita maxima])

HSP 1 Score: 505.0 bits (1299), Expect = 3.8e-139
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAPVSYISNN 60
           MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAPVSYISNN
Sbjct: 1   MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAPVSYISNN 60

Query: 61  TPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQMVGHV 120
           TPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQMVGHV
Sbjct: 61  TPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQMVGHV 120

Query: 121 GTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIISPIPPC 180
           GTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIISPIPPC
Sbjct: 121 GTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIISPIPPC 180

Query: 181 PLLTTQPVQYPKHQGTAATQALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQL 240
           PLLTTQPVQYPKHQGTAATQALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQL
Sbjct: 181 PLLTTQPVQYPKHQGTAATQALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQL 240

Query: 241 PEANSFFNAKF 252
           PEANSFFNAKF
Sbjct: 241 PEANSFFNAKF 251

[Close]

BLAST of CmaCh16G008620 vs. NCBI nr
Match: XP_022985258.1 (uncharacterized protein LOC111483301 isoform X2 [Cucurbita maxima])

HSP 1 Score: 377.1 bits (967), Expect = 1.2e-100
Identity = 201/251 (80.08%), Postives = 201/251 (80.08%), Query Frame = 0


Query: 1   MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAPVSYISNN 60
           MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAPVSYISNN
Sbjct: 1   MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAPVSYISNN 60

Query: 61  TPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQMVGHV 120
           TPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQ     
Sbjct: 61  TPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQ----- 120

Query: 121 GTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIISPIPPC 180
                                                        DLAQGTTIISPIPPC
Sbjct: 121 ---------------------------------------------DLAQGTTIISPIPPC 180

Query: 181 PLLTTQPVQYPKHQGTAATQALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQL 240
           PLLTTQPVQYPKHQGTAATQALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQL
Sbjct: 181 PLLTTQPVQYPKHQGTAATQALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQL 201

Query: 241 PEANSFFNAKF 252
           PEANSFFNAKF
Sbjct: 241 PEANSFFNAKF 201

[Close]

BLAST of CmaCh16G008620 vs. NCBI nr
Match: XP_022151013.1 (uncharacterized protein LOC111019035 isoform X1 [Momordica charantia])

HSP 1 Score: 330.5 bits (846), Expect = 1.3e-86
Identity = 174/257 (67.70%), Postives = 202/257 (78.60%), Query Frame = 0


Query: 1   MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAP----VSY 60
           M+SCHSS+ STID+A  HGSESNK+ KEFKLNPRAKLF PSVANNM+A+PA P    V+Y
Sbjct: 281 MDSCHSSITSTIDVASPHGSESNKSSKEFKLNPRAKLFSPSVANNMTASPATPVVANVAY 340

Query: 61  ISNNTPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQ- 120
           ISN++PV+ V VAQPEV FSP ++    +PP+      +++    ++  F    A F Q 
Sbjct: 341 ISNSSPVVPVAVAQPEVEFSP-FVPRSSVPPA------KFVPYGNSIAGFGGNVAQFSQP 400

Query: 121 MVGHVGTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIIS 180
           MVGHVGTRTQPLRYVGQYP QA PTFGPPNS AVMVGR GQLVY+ P+SHDLAQGTT++S
Sbjct: 401 MVGHVGTRTQPLRYVGQYPLQAGPTFGPPNSQAVMVGRFGQLVYVHPVSHDLAQGTTVVS 460

Query: 181 PIPPCPLLTTQPVQYPKHQGTAAT-QALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPL 240
           P+ PCPLLTTQP QYPKHQGTAA  QALQ CVP PFMASGHQPLAA P  IP LQPSFPL
Sbjct: 461 PVSPCPLLTTQPAQYPKHQGTAAAQQALQFCVPPPFMASGHQPLAAVPNHIPILQPSFPL 520

Query: 241 NHPMQLPEANSFFNAKF 252
           N PMQ+P +N+FF+ KF
Sbjct: 521 NRPMQMPGSNAFFSTKF 530

[Close]

BLAST of CmaCh16G008620 vs. NCBI nr
Match: XP_022151015.1 (uncharacterized protein LOC111019035 isoform X3 [Momordica charantia])

HSP 1 Score: 330.5 bits (846), Expect = 1.3e-86
Identity = 174/257 (67.70%), Postives = 202/257 (78.60%), Query Frame = 0


Query: 1   MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAP----VSY 60
           M+SCHSS+ STID+A  HGSESNK+ KEFKLNPRAKLF PSVANNM+A+PA P    V+Y
Sbjct: 218 MDSCHSSITSTIDVASPHGSESNKSSKEFKLNPRAKLFSPSVANNMTASPATPVVANVAY 277

Query: 61  ISNNTPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQ- 120
           ISN++PV+ V VAQPEV FSP ++    +PP+      +++    ++  F    A F Q 
Sbjct: 278 ISNSSPVVPVAVAQPEVEFSP-FVPRSSVPPA------KFVPYGNSIAGFGGNVAQFSQP 337

Query: 121 MVGHVGTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIIS 180
           MVGHVGTRTQPLRYVGQYP QA PTFGPPNS AVMVGR GQLVY+ P+SHDLAQGTT++S
Sbjct: 338 MVGHVGTRTQPLRYVGQYPLQAGPTFGPPNSQAVMVGRFGQLVYVHPVSHDLAQGTTVVS 397

Query: 181 PIPPCPLLTTQPVQYPKHQGTAAT-QALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPL 240
           P+ PCPLLTTQP QYPKHQGTAA  QALQ CVP PFMASGHQPLAA P  IP LQPSFPL
Sbjct: 398 PVSPCPLLTTQPAQYPKHQGTAAAQQALQFCVPPPFMASGHQPLAAVPNHIPILQPSFPL 457

Query: 241 NHPMQLPEANSFFNAKF 252
           N PMQ+P +N+FF+ KF
Sbjct: 458 NRPMQMPGSNAFFSTKF 467

[Close]

BLAST of CmaCh16G008620 vs. NCBI nr
Match: XP_022151014.1 (uncharacterized protein LOC111019035 isoform X2 [Momordica charantia])

HSP 1 Score: 330.5 bits (846), Expect = 1.3e-86
Identity = 174/257 (67.70%), Postives = 202/257 (78.60%), Query Frame = 0


Query: 1   MNSCHSSMQSTIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPAAP----VSY 60
           M+SCHSS+ STID+A  HGSESNK+ KEFKLNPRAKLF PSVANNM+A+PA P    V+Y
Sbjct: 280 MDSCHSSITSTIDVASPHGSESNKSSKEFKLNPRAKLFSPSVANNMTASPATPVVANVAY 339

Query: 61  ISNNTPVLHVPVAQPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQ- 120
           ISN++PV+ V VAQPEV FSP ++    +PP+      +++    ++  F    A F Q 
Sbjct: 340 ISNSSPVVPVAVAQPEVEFSP-FVPRSSVPPA------KFVPYGNSIAGFGGNVAQFSQP 399

Query: 121 MVGHVGTRTQPLRYVGQYPFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIIS 180
           MVGHVGTRTQPLRYVGQYP QA PTFGPPNS AVMVGR GQLVY+ P+SHDLAQGTT++S
Sbjct: 400 MVGHVGTRTQPLRYVGQYPLQAGPTFGPPNSQAVMVGRFGQLVYVHPVSHDLAQGTTVVS 459

Query: 181 PIPPCPLLTTQPVQYPKHQGTAAT-QALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPL 240
           P+ PCPLLTTQP QYPKHQGTAA  QALQ CVP PFMASGHQPLAA P  IP LQPSFPL
Sbjct: 460 PVSPCPLLTTQPAQYPKHQGTAAAQQALQFCVPPPFMASGHQPLAAVPNHIPILQPSFPL 519

Query: 241 NHPMQLPEANSFFNAKF 252
           N PMQ+P +N+FF+ KF
Sbjct: 520 NRPMQMPGSNAFFSTKF 529

[Close]

BLAST of CmaCh16G008620 vs. TAIR 10
Match: AT5G54920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 168.3 bits (425), Expect = 7.8e-42
Identity = 108/251 (43.03%), Postives = 135/251 (53.78%), Query Frame = 0


Query: 10  STIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPA------APVSYISNNTPV 69
           ST  + P+  ++ +K  KEFKLNP AK F PS+A  +++  A      A + Y+ +NTP+
Sbjct: 274 STNSLPPTQATDPDKKAKEFKLNPGAKTFSPSLAKRLTSAHAGMTPVVANMGYVPSNTPM 333

Query: 70  LHVPVA-QPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQMVGHVGT 129
           L VP A QPE+  SP +L H   P      T    G      +FP        MVG    
Sbjct: 334 LPVPEAVQPEIGISP-FLSHASSPSKFVPYTNLATGNAGGGSHFPQ------HMVGPTIN 393

Query: 130 RTQPLRYVGQY-PFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIISPIPPCP 189
           R QP R+  QY   Q  P    PN P VMVGR GQL+YMQP+S DL QG    S +PP P
Sbjct: 394 RGQPHRFTTQYHSVQPTPMLVNPN-PQVMVGRSGQLMYMQPISQDLVQGAPHNSHLPPRP 453

Query: 190 LLTTQPVQYPKHQGTAAT-QALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQL 249
           L T Q  QYPKHQ   AT Q + L  P+PF A+GHQP    P  IP +Q  FP+N  M +
Sbjct: 454 LFTPQQFQYPKHQSLIATGQPMHLYAPQPFAANGHQPYTVMPTDIPVMQSPFPINRAMPI 513

Query: 250 PEANSFFNAKF 252
           P  N F+  KF
Sbjct: 514 PVPNGFYGTKF 516

[Close]

BLAST of CmaCh16G008620 vs. TAIR 10
Match: AT5G54920.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 168.3 bits (425), Expect = 7.8e-42
Identity = 108/251 (43.03%), Postives = 135/251 (53.78%), Query Frame = 0


Query: 10  STIDMAPSHGSESNKNGKEFKLNPRAKLFYPSVANNMSATPA------APVSYISNNTPV 69
           ST  + P+  ++ +K  KEFKLNP AK F PS+A  +++  A      A + Y+ +NTP+
Sbjct: 279 STNSLPPTQATDPDKKAKEFKLNPGAKTFSPSLAKRLTSAHAGMTPVVANMGYVPSNTPM 338

Query: 70  LHVPVA-QPEVVFSPLYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQMVGHVGT 129
           L VP A QPE+  SP +L H   P      T    G      +FP        MVG    
Sbjct: 339 LPVPEAVQPEIGISP-FLSHASSPSKFVPYTNLATGNAGGGSHFPQ------HMVGPTIN 398

Query: 130 RTQPLRYVGQY-PFQAAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIISPIPPCP 189
           R QP R+  QY   Q  P    PN P VMVGR GQL+YMQP+S DL QG    S +PP P
Sbjct: 399 RGQPHRFTTQYHSVQPTPMLVNPN-PQVMVGRSGQLMYMQPISQDLVQGAPHNSHLPPRP 458

Query: 190 LLTTQPVQYPKHQGTAAT-QALQLCVPEPFMASGHQPLAAAPKVIPALQPSFPLNHPMQL 249
           L T Q  QYPKHQ   AT Q + L  P+PF A+GHQP    P  IP +Q  FP+N  M +
Sbjct: 459 LFTPQQFQYPKHQSLIATGQPMHLYAPQPFAANGHQPYTVMPTDIPVMQSPFPINRAMPI 518

Query: 250 PEANSFFNAKF 252
           P  N F+  KF
Sbjct: 519 PVPNGFYGTKF 521

[Close]

BLAST of CmaCh16G008620 vs. TAIR 10
Match: AT4G26990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-34
Identity = 104/233 (44.64%), Postives = 121/233 (51.93%), Query Frame = 0


Query: 24  KNGKEFKLNPRAKLFYPSVANNMSATP-----AAPVSYISNNTPVLHVPVA-QPEVVFSP 83
           K  KEFKLNP AK+F PS    +S +P        ++YI +NTP+L VP A  PEVV +P
Sbjct: 247 KKPKEFKLNPEAKIFSPSYTKRLSPSPVGMPHVGNIAYIPSNTPMLPVPEAIYPEVVNNP 306

Query: 84  LYLVHLGLPPSLSQMTTQYLGLVATLLNFPNLYALFGQMVGHVGTRTQPLRYVGQY-PFQ 143
            Y+     P           G       FP        M+G    R QP RY  QY   Q
Sbjct: 307 -YVPQAPPPSKFVPYGNVTAGHAVGGFQFPQ------HMIGPTVNRAQPQRYTAQYHSVQ 366

Query: 144 AAPTFGPPNSPAVMVGRLGQLVYMQPLSHDLAQGTTIISPIPPCPLLTTQPVQYPKHQG- 203
           AAP    P SP VMV R GQLVY+Q +S DL QGT  +SP+  CPL T Q VQY KHQG 
Sbjct: 367 AAPMLVNP-SPQVMVARSGQLVYVQSVSQDLVQGTPPLSPMLSCPLPTAQHVQYLKHQGV 426

Query: 204 TAATQALQLCVPEPFMASGHQPLAAAPKVIPAL-QPSFPLNHPMQLPEANSFF 248
            AA Q L LCV  PF   G QP    P   PA+ QP FP N PM +   N F+
Sbjct: 427 VAAGQPLPLCVSLPFTTGGPQPY-GIPTQFPAMQQPPFPTNQPMTVAVPNGFY 470

The following BLAST results are available for this feature:

BLAST of CmaCh16G008620 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh16G008620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JD44	1.8e-139	100.00	uncharacterized protein LOC111483301 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JD48	5.7e-101	80.08	uncharacterized protein LOC111483301 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1DB05	6.2e-87	67.70	uncharacterized protein LOC111019035 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DBR8	6.2e-87	67.70	uncharacterized protein LOC111019035 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DA25	6.2e-87	67.70	uncharacterized protein LOC111019035 isoform X3 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CmaCh16G008620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022985253.1	3.8e-139	100.00	uncharacterized protein LOC111483301 isoform X1 [Cucurbita maxima] >XP_022985254...	[more]
XP_022985258.1	1.2e-100	80.08	uncharacterized protein LOC111483301 isoform X2 [Cucurbita maxima]	[more]
XP_022151013.1	1.3e-86	67.70	uncharacterized protein LOC111019035 isoform X1 [Momordica charantia]	[more]
XP_022151015.1	1.3e-86	67.70	uncharacterized protein LOC111019035 isoform X3 [Momordica charantia]	[more]
XP_022151014.1	1.3e-86	67.70	uncharacterized protein LOC111019035 isoform X2 [Momordica charantia]	[more]

BLAST of CmaCh16G008620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54920.1	7.8e-42	43.03	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G54920.2	7.8e-42	43.03	unknown protein; FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thal...	[more]
AT4G26990.1	2.1e-34	44.64	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR12854:SF12	POLYADENYLATE-BINDING PROTEIN INTERACTING PROTEIN	coord: 2..248
IPR045117	Ataxin2-like	PANTHER	PTHR12854	ATAXIN 2-RELATED	coord: 2..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G008620.1	CmaCh16G008620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034063	stress granule assembly
cellular_component	GO:0010494	cytoplasmic stress granule
molecular_function	GO:0003723	RNA binding