CmaCh16G008470 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATATGCCCAAAGCATATGTTCTCAAGCCCCCATGTCTTTAAGCATCAATATTATTAATAGCTCCAAGTTTGTGTTGCGCCCTAGCCACAGCTCCCCTGCCGGCATGGCCACTTCGAAGCCGCAACTGGAAGTCCATAAAGCAGACCACAGCCCTTCAAAATGGAGCGTGGCTCTTGGAGAAGAGGTTTTCAGCAAATTTGTGGGGCAACCCAATTCCGGTGTGCAGAAGGTGTTGGGCGAGGGCTCGTTGTTCAGCCCGCTGCTGTTCGGGAAGTTCTTCGACCCCGCCGATGCCTTTCCGCTCTGGGAGTTTGAGTCCGATCTGTTGATGTCAGCCCTCCGCAGCTCTGGGAAATCTTCAATTGATTGGTTTCAGACTGACCAGGAATACGTTCTCCAAGCAGAATTACAAGGTATTTTCCTTTTTTCATTTTTTTTTTATTTTTTACTAGAAGTATTTTATGGATTTTTCAAAATATTAATTATTAGGTGCAAAATTAAATGTTGCATATTTATTAAATTTTGATTATAAAATTTAAAAAAAGGGTGGGAGATCAAATTTATTTGAAATCACTGGAACCTCCCACATCGAAGAATTTTAAAACAATGGAGACTTTAAATTGGTAATTCCGTTCAACTTTGATTGGGGTGTGGGCAGGAAACGGCACGCGCTGATTTAAACCCTAAACCTATATGGCTGATAAGGGGATTTTGCCGGCGTTTACCCCTGTGGATCCCAAAAAACCAAACGCTGATGCACTGCGCGTGGTCTAGTTTCTAGTTGTTAAATATTGCCTTTGAGGTTCGTAGGTGGTAGCCTGCCTACACCATGACATGGTGTCTTATGGTGGCTACTATTGTCCTCGCCTCTGAATCACCCCTTTTTTTCATACCACTACAAAAATTTTACTAATAATTAATCAGTTGAAACCTATTATTATATATAAAATTTAAACTTCAAAACAAATATATTAAATAGAAAGTGATTTTTAAGTTAAATTTCTTAAATATTTATTTTGCAGAGAGTTGAAGTTGAAAGTTGAAAGAATGATAAAGAGAATAGATTTTAATGGTGAAATTATGTTATGAACTTCGAGACTCTCAAAAGGGCCTTCAACTCTCTTTGTAGCTACTCATTCAAAAAGATTGAGTGATATGTTTGATTGACACAAACCAAAATTTTACAAACACACAGAACCTTGGAGAAACGCTTTGCAAATTTCCGTAGAAGACGGGAAGGTGTTAGAGATAAGTGGTCAGTTGAAGGAACAACAAAGAGAAGCCACCAAGCTTGTCGATTGGCGATGTGCCAATTGGTGGGAGCACGGATTCGTTCGGCGACTTGAGTTGCCTGAAGATGTTGATTGTTGTAGAATAGAGGCTCGGATGAAGAATGACACAATTCTTGAGATCAAGATTCCCAAGTTAGAAACGAATAGAGGTGCTGACTCAAAGAGCAAGGATTCTGATCAAGATGTTTAAGTTCATGGCCAAACTTGTAATGAAAAACGTGTTTAACTTAAACTTAATTTACATATGCTCTATGGATCTCAAACATATGTATGTTTCTGATCAACTTCTATGGACGGGAATACAAACACTTTCGAAATGTGTAGATAATTGCATTTCTAACCTCATATCAAATGATTAATGGCTTATAATATTGTCA AATATGCCCAAAGCATATGTTCTCAAGCCCCCATGTCTTTAAGCATCAATATTATTAATAGCTCCAAGTTTGTGTTGCGCCCTAGCCACAGCTCCCCTGCCGGCATGGCCACTTCGAAGCCGCAACTGGAAGTCCATAAAGCAGACCACAGCCCTTCAAAATGGAGCGTGGCTCTTGGAGAAGAGGTTTTCAGCAAATTTGTGGGGCAACCCAATTCCGGTGTGCAGAAGGTGTTGGGCGAGGGCTCGTTGTTCAGCCCGCTGCTGTTCGGGAAGTTCTTCGACCCCGCCGATGCCTTTCCGCTCTGGGAGTTTGAGTCCGATCTGTTGATGTCAGCCCTCCGCAGCTCTGGGAAATCTTCAATTGATTGGTTTCAGACTGACCAGGAATACGTTCTCCAAGCAGAATTACAAGAACCTTGGAGAAACGCTTTGCAAATTTCCGTAGAAGACGGGAAGGTGTTAGAGATAAGTGGTCAGTTGAAGGAACAACAAAGAGAAGCCACCAAGCTTGTCGATTGGCGATGTGCCAATTGGTGGGAGCACGGATTCGTTCGGCGACTTGAGTTGCCTGAAGATGTTGATTGTTGTAGAATAGAGGCTCGGATGAAGAATGACACAATTCTTGAGATCAAGATTCCCAAGTTAGAAACGAATAGAGGTGCTGACTCAAAGAGCAAGGATTCTGATCAAGATGTTTAAGTTCATGGCCAAACTTGTAATGAAAAACGTGTTTAACTTAAACTTAATTTACATATGCTCTATGGATCTCAAACATATGTATGTTTCTGATCAACTTCTATGGACGGGAATACAAACACTTTCGAAATGTGTAGATAATTGCATTTCTAACCTCATATCAAATGATTAATGGCTTATAATATTGTCA ATGTCTTTAAGCATCAATATTATTAATAGCTCCAAGTTTGTGTTGCGCCCTAGCCACAGCTCCCCTGCCGGCATGGCCACTTCGAAGCCGCAACTGGAAGTCCATAAAGCAGACCACAGCCCTTCAAAATGGAGCGTGGCTCTTGGAGAAGAGGTTTTCAGCAAATTTGTGGGGCAACCCAATTCCGGTGTGCAGAAGGTGTTGGGCGAGGGCTCGTTGTTCAGCCCGCTGCTGTTCGGGAAGTTCTTCGACCCCGCCGATGCCTTTCCGCTCTGGGAGTTTGAGTCCGATCTGTTGATGTCAGCCCTCCGCAGCTCTGGGAAATCTTCAATTGATTGGTTTCAGACTGACCAGGAATACGTTCTCCAAGCAGAATTACAAGAACCTTGGAGAAACGCTTTGCAAATTTCCGTAGAAGACGGGAAGGTGTTAGAGATAAGTGGTCAGTTGAAGGAACAACAAAGAGAAGCCACCAAGCTTGTCGATTGGCGATGTGCCAATTGGTGGGAGCACGGATTCGTTCGGCGACTTGAGTTGCCTGAAGATGTTGATTGTTGTAGAATAGAGGCTCGGATGAAGAATGACACAATTCTTGAGATCAAGATTCCCAAGTTAGAAACGAATAGAGGTGCTGACTCAAAGAGCAAGGATTCTGATCAAGATGTTTAA MSLSINIINSSKFVLRPSHSSPAGMATSKPQLEVHKADHSPSKWSVALGEEVFSKFVGQPNSGVQKVLGEGSLFSPLLFGKFFDPADAFPLWEFESDLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISVEDGKVLEISGQLKEQQREATKLVDWRCANWWEHGFVRRLELPEDVDCCRIEARMKNDTILEIKIPKLETNRGADSKSKDSDQDV Homology
BLAST of CmaCh16G008470 vs. ExPASy Swiss-Prot
Match: Q9FIT9 (21.7 kDa class VI heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP21.7 PE=2 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 2.8e-48 Identity = 91/181 (50.28%), Postives = 129/181 (71.27%), Query Frame = 0
BLAST of CmaCh16G008470 vs. ExPASy Swiss-Prot
Match: Q6AUW3 (22.3 kDa class VI heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP22.3 PE=2 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 2.9e-37 Identity = 82/185 (44.32%), Postives = 119/185 (64.32%), Query Frame = 0
BLAST of CmaCh16G008470 vs. ExPASy Swiss-Prot
Match: Q9XIE3 (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6A PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09 Identity = 39/129 (30.23%), Postives = 71/129 (55.04%), Query Frame = 0
BLAST of CmaCh16G008470 vs. ExPASy Swiss-Prot
Match: P31673 (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP17.4 PE=2 SV=2) HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09 Identity = 43/147 (29.25%), Postives = 74/147 (50.34%), Query Frame = 0
BLAST of CmaCh16G008470 vs. ExPASy Swiss-Prot
Match: Q84J50 (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 7.5e-09 Identity = 42/151 (27.81%), Postives = 71/151 (47.02%), Query Frame = 0
BLAST of CmaCh16G008470 vs. ExPASy TrEMBL
Match: A0A6J1J4E5 (21.7 kDa class VI heat shock protein OS=Cucurbita maxima OX=3661 GN=LOC111483304 PE=3 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 8.1e-123 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CmaCh16G008470 vs. ExPASy TrEMBL
Match: H6TB45 (HSP23.0 OS=Citrullus lanatus OX=3654 PE=2 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 7.4e-84 Identity = 159/199 (79.90%), Postives = 170/199 (85.43%), Query Frame = 0
BLAST of CmaCh16G008470 vs. ExPASy TrEMBL
Match: A0A0A0L6D5 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G081340 PE=3 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 4.0e-82 Identity = 159/200 (79.50%), Postives = 176/200 (88.00%), Query Frame = 0
BLAST of CmaCh16G008470 vs. ExPASy TrEMBL
Match: A0A5D3C0M7 (21.7 kDa class VI heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00120 PE=3 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 3.4e-81 Identity = 157/200 (78.50%), Postives = 174/200 (87.00%), Query Frame = 0
BLAST of CmaCh16G008470 vs. ExPASy TrEMBL
Match: A0A1S3CJA6 (21.7 kDa class VI heat shock protein OS=Cucumis melo OX=3656 GN=LOC103501614 PE=3 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 3.4e-81 Identity = 157/200 (78.50%), Postives = 174/200 (87.00%), Query Frame = 0
BLAST of CmaCh16G008470 vs. NCBI nr
Match: XP_022985262.1 (21.7 kDa class VI heat shock protein [Cucurbita maxima]) HSP 1 Score: 449.5 bits (1155), Expect = 1.7e-122 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CmaCh16G008470 vs. NCBI nr
Match: KAG6577438.1 (21.7 kDa class VI heat shock protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 402.1 bits (1032), Expect = 3.0e-108 Identity = 195/198 (98.48%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of CmaCh16G008470 vs. NCBI nr
Match: KAG7015509.1 (21.7 kDa class VI heat shock protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 399.1 bits (1024), Expect = 2.6e-107 Identity = 193/198 (97.47%), Postives = 197/198 (99.49%), Query Frame = 0
BLAST of CmaCh16G008470 vs. NCBI nr
Match: XP_023520414.1 (21.7 kDa class VI heat shock protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 396.4 bits (1017), Expect = 1.7e-106 Identity = 191/198 (96.46%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of CmaCh16G008470 vs. NCBI nr
Match: ADU55792.1 (HSP23.0 [Citrullus lanatus]) HSP 1 Score: 320.1 bits (819), Expect = 1.5e-83 Identity = 159/199 (79.90%), Postives = 170/199 (85.43%), Query Frame = 0
BLAST of CmaCh16G008470 vs. TAIR 10
Match: AT5G54660.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 193.4 bits (490), Expect = 2.0e-49 Identity = 91/181 (50.28%), Postives = 129/181 (71.27%), Query Frame = 0
BLAST of CmaCh16G008470 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 65.1 bits (157), Expect = 8.2e-11 Identity = 39/129 (30.23%), Postives = 71/129 (55.04%), Query Frame = 0
BLAST of CmaCh16G008470 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 59.3 bits (142), Expect = 4.5e-09 Identity = 41/142 (28.87%), Postives = 66/142 (46.48%), Query Frame = 0
BLAST of CmaCh16G008470 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 ) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08 Identity = 39/146 (26.71%), Postives = 71/146 (48.63%), Query Frame = 0
BLAST of CmaCh16G008470 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 55.8 bits (133), Expect = 5.0e-08 Identity = 42/147 (28.57%), Postives = 73/147 (49.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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