CmaCh16G008380 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G008380
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Prohibitin
Location	Cma_Chr16: 4789931 .. 4790770 (-)
RNA-Seq Expression	CmaCh16G008380
Synteny	CmaCh16G008380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGCAGCCAAGCCGCTGTGTCATTTCTCACCAATATTGCTCGTGCTGCTTTCGGTCTCGGGGCCGCCGCATCGGTTCTGAATGCCTCCCTGTACACCGTTGACGGTGGTGAGAGAGCTGTCCTCTTCGATCGGTTTCGGGGTGTAATTGACGACACTGTCGGTGAGGGAACACACTTCTTGATTCCATGGCTTCAAAAGCCCTTTATATTTGACATTCGTACGAGACCACACACTTTCTCGTCTGTTTCCGGTACTAAAGATCTTCAGATGGTAAATCTAAGCCTCCGTGTTCTCTCTCGCCCTGAGATTTCTCGTCTCCCCGATATTTTCAAAACCCTAGGTCTAGAGTACGACGAGAAGGTCCTCCCTTCTATTGGAAATGAGGTTCTGAAGGCCGTCGTTGCCCAATTCAACGCCGATCAGCTTTTGACCGAGCGGCCTCACGTTTCGGCTCTTGTGCGTGAGAGCCTGGTTCGGCGGGCGAAGGACTTCAACATTGTGCTGGATGACGTTGCCATCACTCATTTGTCCTATAGCCCAGAGTTCTCCAAGGCAGTTGAGCAGAAGCAGGTAGCGCAACAAGAGGCTGAGCGGTCAAAATTTGTTGTGGCAAAGGCTGAACAAGAAAGAAGGGCCGCAATTATTAGGGCTGAGGGTGAGAGCGAGTCAGCTAAGTTGATTTCTGATGCCACGTCGGCCGCTGGTATGGGTTTGATCGAGCTGAGGAGAATTGAAGCATCAAGGGAGATTGCATCCACCCTCGCCAAGTCGCCGAATGTGGCCTACTTGCCCGGTGGTCAGAACATGCTTTTGGCTCTGAATTCGAATCGTTGA

mRNA sequence

ATGGGTAGCAGCCAAGCCGCTGTGTCATTTCTCACCAATATTGCTCGTGCTGCTTTCGGTCTCGGGGCCGCCGCATCGGTTCTGAATGCCTCCCTGTACACCGTTGACGGTGGTGAGAGAGCTGTCCTCTTCGATCGGTTTCGGGGTGTAATTGACGACACTGTCGGTGAGGGAACACACTTCTTGATTCCATGGCTTCAAAAGCCCTTTATATTTGACATTCGTACGAGACCACACACTTTCTCGTCTGTTTCCGGTACTAAAGATCTTCAGATGGTAAATCTAAGCCTCCGTGTTCTCTCTCGCCCTGAGATTTCTCGTCTCCCCGATATTTTCAAAACCCTAGGTCTAGAGTACGACGAGAAGGTCCTCCCTTCTATTGGAAATGAGGTTCTGAAGGCCGTCGTTGCCCAATTCAACGCCGATCAGCTTTTGACCGAGCGGCCTCACGTTTCGGCTCTTGTGCGTGAGAGCCTGGTTCGGCGGGCGAAGGACTTCAACATTGTGCTGGATGACGTTGCCATCACTCATTTGTCCTATAGCCCAGAGTTCTCCAAGGCAGTTGAGCAGAAGCAGGTAGCGCAACAAGAGGCTGAGCGGTCAAAATTTGTTGTGGCAAAGGCTGAACAAGAAAGAAGGGCCGCAATTATTAGGGCTGAGGGTGAGAGCGAGTCAGCTAAGTTGATTTCTGATGCCACGTCGGCCGCTGGTATGGGTTTGATCGAGCTGAGGAGAATTGAAGCATCAAGGGAGATTGCATCCACCCTCGCCAAGTCGCCGAATGTGGCCTACTTGCCCGGTGGTCAGAACATGCTTTTGGCTCTGAATTCGAATCGTTGA

Coding sequence (CDS)

ATGGGTAGCAGCCAAGCCGCTGTGTCATTTCTCACCAATATTGCTCGTGCTGCTTTCGGTCTCGGGGCCGCCGCATCGGTTCTGAATGCCTCCCTGTACACCGTTGACGGTGGTGAGAGAGCTGTCCTCTTCGATCGGTTTCGGGGTGTAATTGACGACACTGTCGGTGAGGGAACACACTTCTTGATTCCATGGCTTCAAAAGCCCTTTATATTTGACATTCGTACGAGACCACACACTTTCTCGTCTGTTTCCGGTACTAAAGATCTTCAGATGGTAAATCTAAGCCTCCGTGTTCTCTCTCGCCCTGAGATTTCTCGTCTCCCCGATATTTTCAAAACCCTAGGTCTAGAGTACGACGAGAAGGTCCTCCCTTCTATTGGAAATGAGGTTCTGAAGGCCGTCGTTGCCCAATTCAACGCCGATCAGCTTTTGACCGAGCGGCCTCACGTTTCGGCTCTTGTGCGTGAGAGCCTGGTTCGGCGGGCGAAGGACTTCAACATTGTGCTGGATGACGTTGCCATCACTCATTTGTCCTATAGCCCAGAGTTCTCCAAGGCAGTTGAGCAGAAGCAGGTAGCGCAACAAGAGGCTGAGCGGTCAAAATTTGTTGTGGCAAAGGCTGAACAAGAAAGAAGGGCCGCAATTATTAGGGCTGAGGGTGAGAGCGAGTCAGCTAAGTTGATTTCTGATGCCACGTCGGCCGCTGGTATGGGTTTGATCGAGCTGAGGAGAATTGAAGCATCAAGGGAGATTGCATCCACCCTCGCCAAGTCGCCGAATGTGGCCTACTTGCCCGGTGGTCAGAACATGCTTTTGGCTCTGAATTCGAATCGTTGA

Protein sequence

MGSSQAAVSFLTNIARAAFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGTHFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLVRRAKDFNIVLDDVAITHLSYSPEFSKAVEQKQVAQQEAERSKFVVAKAEQERRAAIIRAEGESESAKLISDATSAAGMGLIELRRIEASREIASTLAKSPNVAYLPGGQNMLLALNSNR

Homology

[Close]

BLAST of CmaCh16G008380 vs. ExPASy Swiss-Prot
Match: O04331 (Prohibitin-3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB3 PE=1 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 2.6e-128
Identity = 241/276 (87.32%), Postives = 263/276 (95.29%), Query Frame = 0


Query: 1   MGSSQAAVSFLTNIARAAFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGTH 60
           MGS QAAVSFL+N+A+AAFGLG AA+VLN SL+TVDGGERAV+FDRFRGV+D TVGEGTH
Sbjct: 1   MGSQQAAVSFLSNLAKAAFGLGTAATVLNTSLFTVDGGERAVIFDRFRGVMDQTVGEGTH 60

Query: 61  FLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEYD 120
           FLIP LQ+P IFDIRT+PHTFSS+SGTKDLQMVNL+LRVLSRPE+SRLP IF+TLGLEYD
Sbjct: 61  FLIPILQRPHIFDIRTKPHTFSSISGTKDLQMVNLTLRVLSRPEVSRLPYIFQTLGLEYD 120

Query: 121 EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLVRRAKDFNIVLDDVAITHLSY 180
           EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESL+ RAKDFNIVLDDVAITHLSY
Sbjct: 121 EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLITRAKDFNIVLDDVAITHLSY 180

Query: 181 SPEFSKAVEQKQVAQQEAERSKFVVAKAEQERRAAIIRAEGESESAKLISDATSAAGMGL 240
             EFS+AVEQKQVAQQEAERSKFVV KA+QERRAA+IRAEGESE+A+LISDAT+ AGMGL
Sbjct: 181 GVEFSRAVEQKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLISDATAKAGMGL 240

Query: 241 IELRRIEASREIASTLAKSPNVAYLPGGQNMLLALN 277
           IELRRIEASREIASTLA+SPNVAYLPGGQ+ML ALN
Sbjct: 241 IELRRIEASREIASTLARSPNVAYLPGGQSMLFALN 276

[Close]

BLAST of CmaCh16G008380 vs. ExPASy Swiss-Prot
Match: Q9LK25 (Prohibitin-4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB4 PE=1 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 1.7e-122
Identity = 228/279 (81.72%), Postives = 257/279 (92.11%), Query Frame = 0


Query: 1   MGSSQAAVSFLTNIARAAFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGTH 60
           MGS Q A+SFLTN+A+AAFGLG AA+ LN+SLYTVDGGERAVLFDRFRGV+D TVGEGTH
Sbjct: 1   MGSQQVAISFLTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQTVGEGTH 60

Query: 61  FLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEYD 120
           FLIP+LQ P I+DIRT+PHTFSS SGTKDLQMVNL+LRVL RPE+SRLP IF+TLGLEYD
Sbjct: 61  FLIPYLQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYD 120

Query: 121 EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLVRRAKDFNIVLDDVAITHLSY 180
           EKVLPSIGNEVLKAVVA FNADQLLTERP VSALVR++L++RA++FNI LDD+AITHLSY
Sbjct: 121 EKVLPSIGNEVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIELDDIAITHLSY 180

Query: 181 SPEFSKAVEQKQVAQQEAERSKFVVAKAEQERRAAIIRAEGESESAKLISDATSAAGMGL 240
             EFS+AVE KQVAQQEAERSKFVV KA+QERRAA+IRAEGESE+A+LISDAT+ AGMGL
Sbjct: 181 GAEFSRAVEAKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLISDATAKAGMGL 240

Query: 241 IELRRIEASREIASTLAKSPNVAYLPGGQNMLLALNSNR 280
           IELRRIEASRE+A+TLA+SPNVAYLPGGQ+ML  LN  R
Sbjct: 241 IELRRIEASREVAATLARSPNVAYLPGGQSMLFNLNPGR 279

[Close]

BLAST of CmaCh16G008380 vs. ExPASy Swiss-Prot
Match: Q9LY99 (Prohibitin-5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB5 PE=1 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 8.1e-85
Identity = 165/265 (62.26%), Postives = 209/265 (78.87%), Query Frame = 0


Query: 12  TNIARAAFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGTHFLIPWLQKPFI 71
           +   + A GLGAA + + ++++TVDGG+RAV+F RF G++++ VGEGTH  IPW+QKP+I
Sbjct: 4   SKFTKVALGLGAAIAAVRSTMFTVDGGQRAVMFHRFEGILEEPVGEGTHRKIPWVQKPYI 63

Query: 72  FDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEYDEKVLPSIGNEV 131
           FDIRT+P+  ++ SGTKDLQMVNL+LRV+ RP                          +V
Sbjct: 64  FDIRTKPYKINTDSGTKDLQMVNLTLRVMFRP--------------------------DV 123

Query: 132 LKAVVAQFNADQLLTERPHVSALVRESLVRRAKDFNIVLDDVAITHLSYSPEFSKAVEQK 191
           +KAVVAQFNAD+LLTERP VSAL+RE+L++RAK+FNIVLDDV+IT LSY  EFS AVE+K
Sbjct: 124 VKAVVAQFNADELLTERPQVSALIRETLIKRAKEFNIVLDDVSITGLSYGKEFSLAVERK 183

Query: 192 QVAQQEAERSKFVVAKAEQERRAAIIRAEGESESAKLISDATSAAGMGLIELRRIEASRE 251
           QVAQQEAERSKFVVAKA+QERRAA+IRAEGESE+A++IS AT+ AGMGLI+LRR+EA+RE
Sbjct: 184 QVAQQEAERSKFVVAKADQERRAAVIRAEGESEAARVISKATAGAGMGLIKLRRVEAARE 242

Query: 252 IASTLAKSPNVAYLPGGQNMLLALN 277
           +A TL+ SPNV YLP G NML A+N
Sbjct: 244 VAITLSNSPNVVYLPSGGNMLFAMN 242

[Close]

BLAST of CmaCh16G008380 vs. ExPASy Swiss-Prot
Match: Q54GI9 (Prohibitin-1, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=phbA PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.2e-80
Identity = 153/268 (57.09%), Postives = 208/268 (77.61%), Query Frame = 0


Query: 9   SFLTNIARAAFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGTHFLIPWLQK 68
           SFL  +   A  +G   S+  +S+YTVDGG+RAV+FDR  GV + +VGEGTHF++PWLQK
Sbjct: 3   SFLNKLIPLALTVGTGLSLAQSSMYTVDGGQRAVIFDRISGVKEKSVGEGTHFIMPWLQK 62

Query: 69  PFIFDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEYDEKVLPSIG 128
           P IFDIR+ P    S +G+KDLQ V++++RVL RP++  LP IF  LGL+YDE++LPS+G
Sbjct: 63  PIIFDIRSSPRNIKSDTGSKDLQTVSVTVRVLFRPDVEHLPSIFSKLGLDYDERILPSLG 122

Query: 129 NEVLKAVVAQFNADQLLTERPHVSALVRESLVRRAKDFNIVLDDVAITHLSYSPEFSKAV 188
           NEVLK+VVAQ++A +L+T+R  VS  +RESL++RAK+FN++LDDV+ITHLS+S +F+ A+
Sbjct: 123 NEVLKSVVAQYDATELITQREVVSKEIRESLMKRAKEFNLLLDDVSITHLSFSQDFTNAI 182

Query: 189 EQKQVAQQEAERSKFVVAKAEQERRAAIIRAEGESESAKLISDATSAAGMGLIELRRIEA 248
           E KQVAQQEAERSK++V K EQE++A IIRAEGE+E+AKLI  A   +    IELRRIEA
Sbjct: 183 EHKQVAQQEAERSKYIVMKNEQEKKANIIRAEGEAEAAKLIGQAMGNSA-AFIELRRIEA 242

Query: 249 SREIASTLAKSPNVAYLPGGQNMLLALN 277
            ++I  +L+KS  V Y+P   N+L+ LN
Sbjct: 243 YKDITESLSKSKQVTYVPTSGNLLMNLN 269

[Close]

BLAST of CmaCh16G008380 vs. ExPASy Swiss-Prot
Match: P40961 (Prohibitin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PHB1 PE=1 SV=2)

HSP 1 Score: 298.9 bits (764), Expect = 6.0e-80
Identity = 152/261 (58.24%), Postives = 204/261 (78.16%), Query Frame = 0


Query: 14  IARAAFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGTHFLIPWLQKPFIFD 73
           I + A  +G  AS +  S+Y V GG R V+FDR  GV    VGEGTHFL+PWLQK  I+D
Sbjct: 11  ITKVALPIGIIASGIQYSMYDVKGGSRGVIFDRINGVKQQVVGEGTHFLVPWLQKAIIYD 70

Query: 74  IRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEYDEKVLPSIGNEVLK 133
           +RT+P + ++ +GTKDLQMV+L+LRVL RPE+ +LP I++ LGL+YDE+VLPSIGNEVLK
Sbjct: 71  VRTKPKSIATNTGTKDLQMVSLTLRVLHRPEVLQLPAIYQNLGLDYDERVLPSIGNEVLK 130

Query: 134 AVVAQFNADQLLTERPHVSALVRESLVRRAKDFNIVLDDVAITHLSYSPEFSKAVEQKQV 193
           ++VAQF+A +L+T+R  +S  +R+ L  RA +F I L+DV+ITH+++ PEF+KAVEQKQ+
Sbjct: 131 SIVAQFDAAELITQREIISQKIRKELSTRANEFGIKLEDVSITHMTFGPEFTKAVEQKQI 190

Query: 194 AQQEAERSKFVVAKAEQERRAAIIRAEGESESAKLISDATSAAGMGLIELRRIEASREIA 253
           AQQ+AER+KF+V KAEQER+A++IRAEGE+ESA+ IS A +  G GL+ +RR+EAS++IA
Sbjct: 191 AQQDAERAKFLVEKAEQERQASVIRAEGEAESAEFISKALAKVGDGLLLIRRLEASKDIA 250

Query: 254 STLAKSPNVAYLP----GGQN 271
            TLA S NV YLP    GG N
Sbjct: 251 QTLANSSNVVYLPSQHSGGGN 271

[Close]

BLAST of CmaCh16G008380 vs. TAIR 10
Match: AT5G40770.1 (prohibitin 3 )

HSP 1 Score: 459.5 bits (1181), Expect = 1.9e-129
Identity = 241/276 (87.32%), Postives = 263/276 (95.29%), Query Frame = 0


Query: 1   MGSSQAAVSFLTNIARAAFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGTH 60
           MGS QAAVSFL+N+A+AAFGLG AA+VLN SL+TVDGGERAV+FDRFRGV+D TVGEGTH
Sbjct: 1   MGSQQAAVSFLSNLAKAAFGLGTAATVLNTSLFTVDGGERAVIFDRFRGVMDQTVGEGTH 60

Query: 61  FLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEYD 120
           FLIP LQ+P IFDIRT+PHTFSS+SGTKDLQMVNL+LRVLSRPE+SRLP IF+TLGLEYD
Sbjct: 61  FLIPILQRPHIFDIRTKPHTFSSISGTKDLQMVNLTLRVLSRPEVSRLPYIFQTLGLEYD 120

Query: 121 EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLVRRAKDFNIVLDDVAITHLSY 180
           EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESL+ RAKDFNIVLDDVAITHLSY
Sbjct: 121 EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLITRAKDFNIVLDDVAITHLSY 180

Query: 181 SPEFSKAVEQKQVAQQEAERSKFVVAKAEQERRAAIIRAEGESESAKLISDATSAAGMGL 240
             EFS+AVEQKQVAQQEAERSKFVV KA+QERRAA+IRAEGESE+A+LISDAT+ AGMGL
Sbjct: 181 GVEFSRAVEQKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLISDATAKAGMGL 240

Query: 241 IELRRIEASREIASTLAKSPNVAYLPGGQNMLLALN 277
           IELRRIEASREIASTLA+SPNVAYLPGGQ+ML ALN
Sbjct: 241 IELRRIEASREIASTLARSPNVAYLPGGQSMLFALN 276

[Close]

BLAST of CmaCh16G008380 vs. TAIR 10
Match: AT3G27280.2 (prohibitin 4 )

HSP 1 Score: 440.3 bits (1131), Expect = 1.2e-123
Identity = 228/279 (81.72%), Postives = 257/279 (92.11%), Query Frame = 0


Query: 1   MGSSQAAVSFLTNIARAAFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGTH 60
           MGS Q A+SFLTN+A+AAFGLG AA+ LN+SLYTVDGGERAVLFDRFRGV+D TVGEGTH
Sbjct: 1   MGSQQVAISFLTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQTVGEGTH 60

Query: 61  FLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEYD 120
           FLIP+LQ P I+DIRT+PHTFSS SGTKDLQMVNL+LRVL RPE+SRLP IF+TLGLEYD
Sbjct: 61  FLIPYLQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYD 120

Query: 121 EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLVRRAKDFNIVLDDVAITHLSY 180
           EKVLPSIGNEVLKAVVA FNADQLLTERP VSALVR++L++RA++FNI LDD+AITHLSY
Sbjct: 121 EKVLPSIGNEVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIELDDIAITHLSY 180

Query: 181 SPEFSKAVEQKQVAQQEAERSKFVVAKAEQERRAAIIRAEGESESAKLISDATSAAGMGL 240
             EFS+AVE KQVAQQEAERSKFVV KA+QERRAA+IRAEGESE+A+LISDAT+ AGMGL
Sbjct: 181 GAEFSRAVEAKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLISDATAKAGMGL 240

Query: 241 IELRRIEASREIASTLAKSPNVAYLPGGQNMLLALNSNR 280
           IELRRIEASRE+A+TLA+SPNVAYLPGGQ+ML  LN  R
Sbjct: 241 IELRRIEASREVAATLARSPNVAYLPGGQSMLFNLNPGR 279

[Close]

BLAST of CmaCh16G008380 vs. TAIR 10
Match: AT3G27280.1 (prohibitin 4 )

HSP 1 Score: 440.3 bits (1131), Expect = 1.2e-123
Identity = 228/279 (81.72%), Postives = 257/279 (92.11%), Query Frame = 0


Query: 1   MGSSQAAVSFLTNIARAAFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGTH 60
           MGS Q A+SFLTN+A+AAFGLG AA+ LN+SLYTVDGGERAVLFDRFRGV+D TVGEGTH
Sbjct: 1   MGSQQVAISFLTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQTVGEGTH 60

Query: 61  FLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEYD 120
           FLIP+LQ P I+DIRT+PHTFSS SGTKDLQMVNL+LRVL RPE+SRLP IF+TLGLEYD
Sbjct: 61  FLIPYLQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYD 120

Query: 121 EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLVRRAKDFNIVLDDVAITHLSY 180
           EKVLPSIGNEVLKAVVA FNADQLLTERP VSALVR++L++RA++FNI LDD+AITHLSY
Sbjct: 121 EKVLPSIGNEVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIELDDIAITHLSY 180

Query: 181 SPEFSKAVEQKQVAQQEAERSKFVVAKAEQERRAAIIRAEGESESAKLISDATSAAGMGL 240
             EFS+AVE KQVAQQEAERSKFVV KA+QERRAA+IRAEGESE+A+LISDAT+ AGMGL
Sbjct: 181 GAEFSRAVEAKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLISDATAKAGMGL 240

Query: 241 IELRRIEASREIASTLAKSPNVAYLPGGQNMLLALNSNR 280
           IELRRIEASRE+A+TLA+SPNVAYLPGGQ+ML  LN  R
Sbjct: 241 IELRRIEASREVAATLARSPNVAYLPGGQSMLFNLNPGR 279

[Close]

BLAST of CmaCh16G008380 vs. TAIR 10
Match: AT5G14300.1 (prohibitin 5 )

HSP 1 Score: 315.1 bits (806), Expect = 5.7e-86
Identity = 165/265 (62.26%), Postives = 209/265 (78.87%), Query Frame = 0


Query: 12  TNIARAAFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGTHFLIPWLQKPFI 71
           +   + A GLGAA + + ++++TVDGG+RAV+F RF G++++ VGEGTH  IPW+QKP+I
Sbjct: 4   SKFTKVALGLGAAIAAVRSTMFTVDGGQRAVMFHRFEGILEEPVGEGTHRKIPWVQKPYI 63

Query: 72  FDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEYDEKVLPSIGNEV 131
           FDIRT+P+  ++ SGTKDLQMVNL+LRV+ RP                          +V
Sbjct: 64  FDIRTKPYKINTDSGTKDLQMVNLTLRVMFRP--------------------------DV 123

Query: 132 LKAVVAQFNADQLLTERPHVSALVRESLVRRAKDFNIVLDDVAITHLSYSPEFSKAVEQK 191
           +KAVVAQFNAD+LLTERP VSAL+RE+L++RAK+FNIVLDDV+IT LSY  EFS AVE+K
Sbjct: 124 VKAVVAQFNADELLTERPQVSALIRETLIKRAKEFNIVLDDVSITGLSYGKEFSLAVERK 183

Query: 192 QVAQQEAERSKFVVAKAEQERRAAIIRAEGESESAKLISDATSAAGMGLIELRRIEASRE 251
           QVAQQEAERSKFVVAKA+QERRAA+IRAEGESE+A++IS AT+ AGMGLI+LRR+EA+RE
Sbjct: 184 QVAQQEAERSKFVVAKADQERRAAVIRAEGESEAARVISKATAGAGMGLIKLRRVEAARE 242

Query: 252 IASTLAKSPNVAYLPGGQNMLLALN 277
           +A TL+ SPNV YLP G NML A+N
Sbjct: 244 VAITLSNSPNVVYLPSGGNMLFAMN 242

[Close]

BLAST of CmaCh16G008380 vs. TAIR 10
Match: AT1G03860.1 (prohibitin 2 )

HSP 1 Score: 258.8 bits (660), Expect = 4.9e-69
Identity = 138/253 (54.55%), Postives = 183/253 (72.33%), Query Frame = 0


Query: 20  GLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGTHFLIPWLQKPFIFDIRTRPH 79
           GLG  A  L  SLY VDGG RAV+F+R  G+ +    EGTHF++PW ++P I+D+R RP+
Sbjct: 26  GLGVYA--LTNSLYNVDGGHRAVMFNRLTGIKEKVYPEGTHFMVPWFERPIIYDVRARPY 85

Query: 80  TFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEYDEKVLPSIGNEVLKAVVAQF 139
              S +G+ DLQMV + LRVL+RP   RLP I++TLG  Y E+VLPSI +E LKAVVAQ+
Sbjct: 86  LVESTTGSHDLQMVKIGLRVLTRPMGDRLPQIYRTLGENYSERVLPSIIHETLKAVVAQY 145

Query: 140 NADQLLTERPHVSALVRESLVRRAKDFNIVLDDVAITHLSYSPEFSKAVEQKQVAQQEAE 199
           NA QL+T+R  VS  +R+ L  RA +F+I LDDV+IT L++  EF+ A+E KQVA QEAE
Sbjct: 146 NASQLITQREAVSREIRKILTERASNFDIALDDVSITTLTFGKEFTAAIEAKQVAAQEAE 205

Query: 200 RSKFVVAKAEQERRAAIIRAEGESESAKLISDATSAAGMGLIELRRIEASREIASTLAKS 259
           R+KF+V KAEQ+RR+A+IRA+GE++SA+LI  A  A     I LR+IEA+REIA T+A+S
Sbjct: 206 RAKFIVEKAEQDRRSAVIRAQGEAKSAQLIGQAI-ANNQAFITLRKIEAAREIAQTIAQS 265

Query: 260 PNVAYLPGGQNML 273
            N  YL     +L
Sbjct: 266 ANKVYLSSNDLLL 275

The following BLAST results are available for this feature:

BLAST of CmaCh16G008380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04331	2.6e-128	87.32	Prohibitin-3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB3 PE=1 SV=1	[more]
Q9LK25	1.7e-122	81.72	Prohibitin-4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB4 PE=1 SV=1	[more]
Q9LY99	8.1e-85	62.26	Prohibitin-5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB5 PE=1 SV=1	[more]
Q54GI9	1.2e-80	57.09	Prohibitin-1, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=phbA PE=3 SV...	[more]
P40961	6.0e-80	58.24	Prohibitin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]

BLAST of CmaCh16G008380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40770.1	1.9e-129	87.32	prohibitin 3	[more]
AT3G27280.2	1.2e-123	81.72	prohibitin 4	[more]
AT3G27280.1	1.2e-123	81.72	prohibitin 4	[more]
AT5G14300.1	5.7e-86	62.26	prohibitin 5	[more]
AT1G03860.1	4.9e-69	54.55	prohibitin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 191..211
None	No IPR available	PANTHER	PTHR23222:SF26	PROHIBITIN-3, MITOCHONDRIAL-LIKE	coord: 1..276
IPR000163	Prohibitin	PRINTS	PR00679	PROHIBITIN	coord: 210..226 score: 64.71 coord: 116..134 score: 75.71 coord: 93..112 score: 61.15 coord: 139..155 score: 57.47 coord: 162..181 score: 63.85 coord: 187..210 score: 76.28 coord: 75..91 score: 59.28
IPR000163	Prohibitin	PANTHER	PTHR23222	PROHIBITIN	coord: 1..276
IPR000163	Prohibitin	CDD	cd03401	SPFH_prohibitin	coord: 32..226 e-value: 8.89803E-94 score: 273.235
IPR001107	Band 7 domain	SMART	SM00244	PHB_4	coord: 31..192 e-value: 1.1E-47 score: 174.4
IPR001107	Band 7 domain	PFAM	PF01145	Band_7	coord: 34..211 e-value: 7.4E-23 score: 81.4
IPR036013	Band 7/SPFH domain superfamily	GENE3D	3.30.479.30	Band 7 domain	coord: 60..194 e-value: 4.7E-9 score: 38.5
IPR036013	Band 7/SPFH domain superfamily	SUPERFAMILY	117892	Band 7/SPFH domain	coord: 63..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G008380.1	CmaCh16G008380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007005	mitochondrion organization
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0016020	membrane