CmaCh16G007870 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAGACTTGGTCCTCTGTTCTTAAAGAGGGCAGAATAGAACTTAGAGAAAGGCTTTCAAGGAAGAAACAGATCTGCGAAGCTCTTAAACTGCTCAACAATGGCGTCAAAGCTACTCCTTCTCTCAGTCTTTGTGTTTGATGTCATCGCTTTTGGGTTAGCCATTGCAGCTGAGCAAAGGAGAAGCACTGTAAAGCTCTTACTCTTTTCCCCTCTCTCTTTACTTCGCTTTATTGTTGCATATTTTAGTGAAAATTTGTGGCTTTACTTCAAATCTTGGTGATCTATGGCCTTTCTCTTCTGGGTTTGCTTAGTTCATTTGGCTCTTAATATGGGTTCTGAATGCAGAGACGGAATATGAGGCTACAGCCTTTCCCTTCACCATTGGGTTTTTAGGTTTAAGGGATTTAGAACTTTCCCGCTACTTTTCTCAGCTGGAAAAGCGCTCAGATCTACTTTTATTGTTTTTCTTAAACGCCAATTGTCCTGCTCGTACAGAAACTAATTGTGAATGATAACACATAATTTCAATGCACTTTTTGAGTTCTTTGTGTTCTTCAGGTTCTTCTAGATCGAGTGTGTGTTGTTGTGTGATTCTGATAGTGTTTTGTTATTGGGATTGATTGTGTAAGATAAGATGGGAGGTTGTGATATACCATAACAAATCTCGAAAAACTACTCTTTTCATGTAACGATGCTTAACCGTGGTACCGATATTATTCGGGGCGGAGAACGAGCTTCTACGAACCTTCTTCGATGTGAGATTTGCAAATCTTGAAAGACTACTCTTTCGTTTAAGGATACTTAATCACTAGGTTGAGATTGCTTTAAGGAGAGATCTTGTAAAAGTCTAAGCCCGCTGGTAACAAATATTGTTCTTTTTGGACTTTCCCTTTTAGCTTCCACTCAATGTTTTAAAATGCGTATGCTAGGGAGAGGTTTCGACCCTTATAAAGAATATTTCGTTTTCCTCTCCAACCAATATGGGATCTCACTATCTACCCCCTTTAGGGCCCAGCATCTTCGTCGGCACTTGTTCCCTTCTCTAATCGATGTGGGACTCCCATTCCACTCACCTCTTTGAGCCCAGCGTTCTTGCTAGCACACTTTGTGTCCACCCCCCTTCGGGGTTCAGCCTCCTCGTTGGCACATCGCTCGTTGTCTGGCTCTAATATCATTTGTAACCGCCCAAGCCCACTGTTAGTTAATATTGTCCTCTTTAAGCTTTCCCTTCTAAGCTCCCCTTCAAGGTTTTAAAATGCATATGATAGAGAGAGGTTTCTACGCCCTTTTAAAGAATGTTTCGTTCTCTTCCCAACTAACGTGGGATCTCAAAGACAAATCTAAAGATGAATTCTTCTTCAAAGGCAGATCTGATCTTCTTAAGCCCCACATTGTTTGTTTTTGATCCACAAGCCATTACTTTCCCCTCACTTTCTTTACCTGCTCCCAACAAGAACAGCCAAACTCATAACTCAGTGGGGAACTGTTTGAAAGGTCAATAATTGTCTTCTTTTTGTAAAAGATTTAGTTGAAGTACTTTGCATTCTTATCTGTTCTACGAAGGACAAGATATTTATCTCTAAAAAAACTTTGAATGTTCTAAAGAGTTCATAATTATTTTAATTCCATTTGATTTGAAATGATTTCACAGGCAAAGATAGTTGAAGACACTGATGCCAAAAAAAACTATTGTGTATATGACTCAGACATTTCAACTGGCTTGGGAGTTGGAGCATTTCTCTTCCTGATGGCTAGCCAGATCCTCATAATGGTGGCTAGCCGCTGCTTTTGCTGCGGTAAGCCTCTGAGTCCGGACGGTTCGAGGGCTTGGGCCATCATTCTCTTCATAACTTGCTGGTAAGTCGAGTCGAGCAAACTAACATGTTACGACATCGAAATTTTGTATAATAATATGATATTGTCTACTGATATGAAATAATCTGTTTCAGGGTGTTTTTTTTAATCGCTGAGATTTGCGTACTCGCGGGTTCTGCTAGGAATGCATACCACACCAAGTACAGAACATTGCTTACTGATACTCCTCCCTCTTGTCAAATGCTGAGAAGAGGAGTGTTTGCTGCAGGAGCAGCTTTCATTTTCTTAACTTCCATTGTTTCGCAGTCCTACTACGTTTGCTACTCGAGGGCCCGGGAGAGCTTCCAATCACCCAACGAAGACACTGGCATCGGCATGAGTTCGTACCGATGAGGTTCATCGTAAATGTCGTTTTCGATCACGTTATGCTTCGATATAGTTTTGCCTTACATTACATTACACCTTTTGTAGCTTTCAATCCAGTTTATAGAAGCCTATAGGTTGTCGTCTTTCTCTCTACCGTTCGATGTTTCGACAAAACTCTGTGGTCGATAGTCTTCGTGTCGGTATCAGAAAAACATTGCTTGTTTGATGGTTTAGGCTATTAGAAAATGAAGATTTATGTTGCAGGATAATGTTTCTTATTCTTATTCTTTCATCCTTTTGATTATTTTCCCAG CTAGACTTGGTCCTCTGTTCTTAAAGAGGGCAGAATAGAACTTAGAGAAAGGCTTTCAAGGAAGAAACAGATCTGCGAAGCTCTTAAACTGCTCAACAATGGCGTCAAAGCTACTCCTTCTCTCAGTCTTTGTGTTTGATGTCATCGCTTTTGGGTTAGCCATTGCAGCTGAGCAAAGGAGAAGCACTGCAAAGATAGTTGAAGACACTGATGCCAAAAAAAACTATTGTGTATATGACTCAGACATTTCAACTGGCTTGGGAGTTGGAGCATTTCTCTTCCTGATGGCTAGCCAGATCCTCATAATGGTGGCTAGCCGCTGCTTTTGCTGCGGTAAGCCTCTGAGTCCGGACGGTTCGAGGGCTTGGGCCATCATTCTCTTCATAACTTGCTGGGTGTTTTTTTTAATCGCTGAGATTTGCGTACTCGCGGGTTCTGCTAGGAATGCATACCACACCAAGTACAGAACATTGCTTACTGATACTCCTCCCTCTTGTCAAATGCTGAGAAGAGGAGTGTTTGCTGCAGGAGCAGCTTTCATTTTCTTAACTTCCATTGTTTCGCAGTCCTACTACGTTTGCTACTCGAGGGCCCGGGAGAGCTTCCAATCACCCAACGAAGACACTGGCATCGGCATGAGTTCGTACCGATGAGGTTCATCGTAAATGTCGTTTTCGATCACGTTATGCTTCGATATAGTTTTGCCTTACATTACATTACACCTTTTGTAGCTTTCAATCCAGTTTATAGAAGCCTATAGGTTGTCGTCTTTCTCTCTACCGTTCGATGTTTCGACAAAACTCTGTGGTCGATAGTCTTCGTGTCGGTATCAGAAAAACATTGCTTGTTTGATGGTTTAGGCTATTAGAAAATGAAGATTTATGTTGCAGGATAATGTTTCTTATTCTTATTCTTTCATCCTTTTGATTATTTTCCCAG ATGGCGTCAAAGCTACTCCTTCTCTCAGTCTTTGTGTTTGATGTCATCGCTTTTGGGTTAGCCATTGCAGCTGAGCAAAGGAGAAGCACTGCAAAGATAGTTGAAGACACTGATGCCAAAAAAAACTATTGTGTATATGACTCAGACATTTCAACTGGCTTGGGAGTTGGAGCATTTCTCTTCCTGATGGCTAGCCAGATCCTCATAATGGTGGCTAGCCGCTGCTTTTGCTGCGGTAAGCCTCTGAGTCCGGACGGTTCGAGGGCTTGGGCCATCATTCTCTTCATAACTTGCTGGGTGTTTTTTTTAATCGCTGAGATTTGCGTACTCGCGGGTTCTGCTAGGAATGCATACCACACCAAGTACAGAACATTGCTTACTGATACTCCTCCCTCTTGTCAAATGCTGAGAAGAGGAGTGTTTGCTGCAGGAGCAGCTTTCATTTTCTTAACTTCCATTGTTTCGCAGTCCTACTACGTTTGCTACTCGAGGGCCCGGGAGAGCTTCCAATCACCCAACGAAGACACTGGCATCGGCATGAGTTCGTACCGATGA MASKLLLLSVFVFDVIAFGLAIAAEQRRSTAKIVEDTDAKKNYCVYDSDISTGLGVGAFLFLMASQILIMVASRCFCCGKPLSPDGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHTKYRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARESFQSPNEDTGIGMSSYR Homology
BLAST of CmaCh16G007870 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 245.4 bits (625), Expect = 3.7e-65 Identity = 119/172 (69.19%), Postives = 141/172 (81.98%), Query Frame = 0
BLAST of CmaCh16G007870 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 237.3 bits (604), Expect = 1.0e-62 Identity = 123/182 (67.58%), Postives = 147/182 (80.77%), Query Frame = 0
BLAST of CmaCh16G007870 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 233.8 bits (595), Expect = 1.1e-61 Identity = 112/174 (64.37%), Postives = 141/174 (81.03%), Query Frame = 0
BLAST of CmaCh16G007870 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 224.9 bits (572), Expect = 5.1e-59 Identity = 107/174 (61.49%), Postives = 137/174 (78.74%), Query Frame = 0
BLAST of CmaCh16G007870 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 174.5 bits (441), Expect = 8.0e-44 Identity = 84/185 (45.41%), Postives = 125/185 (67.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|