CmaCh16G007640 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G007640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Glycinamide ribonucleotide synthetase
Location	Cma_Chr16: 4188557 .. 4191885 (-)
RNA-Seq Expression	CmaCh16G007640
Synteny	CmaCh16G007640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTGCACCACTCTTAGTCTTGGAGGAGGATCATTCAAGTTTTGTAGCATTGATAGGGGCTGCCAGATAAAGAATCATCTCCGATTCTCTAATGGGTTTGTGCGCAATGGACGATGCAATTTAGTCTGTAACTCTGCAATGTCTTTCTCCCCCCTTAGCTTCCATTCTCTTCCACGTCAGGATTTTCAATTCCACCATCGTTCACGTTTCTCCTCCCATGTCATCAACTGTTCTACTTTTAACTCAGAGGCGTCAATCTCTTCTAATAAGGCAAATGGTAATTTGGGGTCCTTGGAAAATTGGTCTTGTTCGGATGATATTAGAGTTTTTTTTATGGAAATTGTTGTTTGAAACTTACTTGCAGACGAACGAGTTATTGTATTGGTGATTGGTGGAGGAGGGAGAGAACATGCGCTTTGCTATGCACTGAAGCGCTCTCCTTCCTGTGATGCTGTGTTCTGTGCACCAGGCAATGCCGGGATTTCGAGCTCGGGCGATGCCACTTGTATTCCTGACCTCCATATCGACGACAGTGCTGCTGTCATTTCCTTTTGTCGAAAATGGAATGTAGGATTGGTTGTTGTAGGCCCTGAGGCCCCTCTTGTTGCAGGGCTTGCAAATGATTTAGTGAAGGCTGGGATTCCTACTTTTGGCCCCTCATCTGAGGCTGCTGCTTTGGAAGGCTCCAAAAATTTCATGAAGCGTTTGTGTGATAAATATGGAATCCCCACTGCAAAGGTTTGTTTTTGTTGTTCTTGGCTCTGTACCTTAAACTTGTATGCTTAGTTCCTAGCCAAACTTTGGTATTCAATAACTTTCTATTTGAGTTTTCGTCATGTAAAACTGAAAATTCTTTCATATCTCCTTGGATCGAATTGGGGTGTGGATAATCTCAGGGATTGATTGATCGGGATGAGTTCGATACTCTTCCACCCGCTATGAAAAGAAATAGGCACATCAAGAAAATTTAGTATAATGTTTGATCTTGGCTTTGCAACATTAATGAGAATTGAAGAACATTAATGAGAATTGAAGAACATTAATGAGATCTGACTAACCTTTGTCACATGGATTACTTGGTACAGTATCAATCCTTTACAGACCCTTCTGCTGCAAAGCAATATATTCAAGAACAAGGCGCCCCTATAGTCATCAAAGCAGATGGATTGGCTGCTGGAAAAGGAGTTGTTGTCGCTACGACATTGGAGGAGCCTTATGAAGCTGTTGATGCAATGCTTGTGAAGGGTGCTTTTGGTTCGGCCGGTGGTTGTGTCGTTGTGGAAGAATACCTAGAAGGAGAAGAAGCTTCCTTTTTTGCTCTTGTAGATGGAGAGAATGCCATACCCCTAGAATCTGCCCAGGATCATAAAAGAGTAGGGGACGGTGACACGGGACCTAATACAGGTGGTATGGGTGCTTACTCCCCAGCTCCTATCATAACAAGGGAGCTTCAAAGGATAGTCATGGAGTCTATAATTCTACCTACGGTAAAAGGAATGGCAGAAGAGGGTTGCAGGTTTGTTGGGGTTTTGTTTGCTGGCCTTATGATTGAGAAGAAGTCTGGCTTGCCAAAGTTGATTGAATACAACGTACGCTTTGGGGATCCGGAGTGTCAGGTTAGTCGACTCACATTGAACTTTTTTGCTTGTAATTTGACCATGTGTGCTTGCAGATACATTCCAAGGTAGAATGAGTTAGATATTCTTTACTCCATGGAGCATTGGAGTTCATGAAATGACTAACTTGTGGCTAGTGAGTTTGTTAGATTCTTGACTGGAGCCCTTTCTTGTAGTTCGACTCGTTTTTGTATGCTGGCGTATTCTTCCATTTCTTCTGAAGTCGGGTTTTTTCATGTAATGGCCCAAGTTCTTTTGGGCTTCCCCCTCAAAAAACGCGTCTGCTAAGGAGAGGTTTCCACACCCTTATAATGAATACTGTTCCCCTCTCCGACCGATGTAGGATCTCATATTTCATGACAAAAGACGCTAACTTGTAGATAGTCAAGGGAAAAGTACAAAAGAAACTGTCAGGGAATAGCGACAATAATCCTCTTTGGGCTTTCCTTGAAGGTTTTTAAAACGCGTTTGCTAGGGTGAGGTTTCCCTCACCCTTATAAAGAATGTTTCGTTTTCCTCCCCAACTAATGGGGATCTCACAATCCAACCCCCTTCAGGGCCTAAAATGTTCCTCTCTCTAATCGATGTGGGACCCCCCAATCTACCCCCTTCAGGGCCAGCGTCCTCACTGGCACACCTCCCGGTGTCCACTCCCCTTCAGGATTCAAGCTCACCGCTAGCCGATATTGTTCTTGTTGGGCTTTCCCTTTTGAGTTTCCCCTCAAGGTTTTTAAAACACATTTGCTAGAGAGGTTTTCACGCCCTTATAAAGAATATTTTGTTCTCTTCCGAATCGATGTGGGCCCTAGGTCACAAAAGATACACAAAGATGAAAGCAGAGATGATGATGATATAAGAACTGAAATGGGACATAGCAAGAGGTCAAGAGTTGTACACAATCTAAAAACAAGGCCTGCTGACAACAGAGCTGCTCCTTTTCATTAATTTCTATATCCTTCATCTTTCATATTTCCCTTTTTTGCTTCAACTTGTGAGAACTATCACCTTTTGTGTAGCCTTGTTCTTGACATGTTTCTGATCATAAACCTCTGGCCTTGATGAAAAGCAGGTGCTGATGGTTAGGTTGGAATCAGACCTTGCAAAAGTTCTTCTTGCAACATGTAGAGGAGAGCTAACTGGGGTTTCACTGAATTGGTCCCCGGGGTCTTCGATGGTGGTCGTGATGGCGAGCAAGGGCTATCCTGGGGCGTACGAGAAGGGAACTATGATTCAAAACCTCGAAGAAGCAGAGGTCGTTGCTCCATCTGTTAAGATATTTCATGCTGGCACTTCTTCCGACTCCGAAGGCAACTTCATTGCTGTTGGCGGGCGTGTTCTTGGGGTTGCTGCAAAAGGCAAAAACATCGAAGAGGCACGGGACAGAGCATACCAAGCAGTCGAGGAAATCCGTTGGTCGGGTGGGTTCTACAGGAAGGATATAGGGTGGAGAGCTCTAGAAAAGCAATTTTCTTTGCAGGAATAATGCACAAGTTTGAGAATTAATAGGAACATGTATGAGTTCACGTCTTCATGAATAAGTTCTCACTTATTTCTTCAGCTGTTGGGGGAAACTATCTGTTGTATAAAAAACTAATGATGAATGTTCTTGAGCTTCAGCCATTGCTTTCCCTTCAATCCATTGATGTAATCTCGGATTGCCATCCATGAAATTAACCAAATAGTTTAATCCAGTTAATACTATTGTGATAA

mRNA sequence

ATGTCTTGCACCACTCTTAGTCTTGGAGGAGGATCATTCAAGTTTTGTAGCATTGATAGGGGCTGCCAGATAAAGAATCATCTCCGATTCTCTAATGGGTTTGTGCGCAATGGACGATGCAATTTAGTCTGTAACTCTGCAATGTCTTTCTCCCCCCTTAGCTTCCATTCTCTTCCACGTCAGGATTTTCAATTCCACCATCGTTCACGTTTCTCCTCCCATGTCATCAACTGTTCTACTTTTAACTCAGAGGCGTCAATCTCTTCTAATAAGGCAAATGACGAACGAGTTATTGTATTGGTGATTGGTGGAGGAGGGAGAGAACATGCGCTTTGCTATGCACTGAAGCGCTCTCCTTCCTGTGATGCTGTGTTCTGTGCACCAGGCAATGCCGGGATTTCGAGCTCGGGCGATGCCACTTGTATTCCTGACCTCCATATCGACGACAGTGCTGCTGTCATTTCCTTTTGTCGAAAATGGAATGTAGGATTGGTTGTTGTAGGCCCTGAGGCCCCTCTTGTTGCAGGGCTTGCAAATGATTTAGTGAAGGCTGGGATTCCTACTTTTGGCCCCTCATCTGAGGCTGCTGCTTTGGAAGGCTCCAAAAATTTCATGAAGCGTTTGTGTGATAAATATGGAATCCCCACTGCAAAGTATCAATCCTTTACAGACCCTTCTGCTGCAAAGCAATATATTCAAGAACAAGGCGCCCCTATAGTCATCAAAGCAGATGGATTGGCTGCTGGAAAAGGAGTTGTTGTCGCTACGACATTGGAGGAGCCTTATGAAGCTGTTGATGCAATGCTTGTGAAGGGTGCTTTTGGTTCGGCCGGTGGTTGTGTCGTTGTGGAAGAATACCTAGAAGGAGAAGAAGCTTCCTTTTTTGCTCTTGTAGATGGAGAGAATGCCATACCCCTAGAATCTGCCCAGGATCATAAAAGAGTAGGGGACGGTGACACGGGACCTAATACAGGTGGTATGGGTGCTTACTCCCCAGCTCCTATCATAACAAGGGAGCTTCAAAGGATAGTCATGGAGTCTATAATTCTACCTACGGTAAAAGGAATGGCAGAAGAGGGTTGCAGGTTTGTTGGGGTTTTGTTTGCTGGCCTTATGATTGAGAAGAAGTCTGGCTTGCCAAAGTTGATTGAATACAACGTACGCTTTGGGGATCCGGAGTGTCAGGTGCTGATGGTTAGGTTGGAATCAGACCTTGCAAAAGTTCTTCTTGCAACATGTAGAGGAGAGCTAACTGGGGTTTCACTGAATTGGTCCCCGGGGTCTTCGATGGTGGTCGTGATGGCGAGCAAGGGCTATCCTGGGGCGTACGAGAAGGGAACTATGATTCAAAACCTCGAAGAAGCAGAGGTCGTTGCTCCATCTGTTAAGATATTTCATGCTGGCACTTCTTCCGACTCCGAAGGCAACTTCATTGCTGTTGGCGGGCGTGTTCTTGGGGTTGCTGCAAAAGGCAAAAACATCGAAGAGGCACGGGACAGAGCATACCAAGCAGTCGAGGAAATCCGTTGGTCGGGTGGGTTCTACAGGAAGGATATAGGGTGGAGAGCTCTAGAAAAGCAATTTTCTTTGCAGGAATAATGCACAAGTTTGAGAATTAATAGGAACATGTATGAGTTCACGTCTTCATGAATAAGTTCTCACTTATTTCTTCAGCTGTTGGGGGAAACTATCTGTTGTATAAAAAACTAATGATGAATGTTCTTGAGCTTCAGCCATTGCTTTCCCTTCAATCCATTGATGTAATCTCGGATTGCCATCCATGAAATTAACCAAATAGTTTAATCCAGTTAATACTATTGTGATAA

Coding sequence (CDS)

ATGTCTTGCACCACTCTTAGTCTTGGAGGAGGATCATTCAAGTTTTGTAGCATTGATAGGGGCTGCCAGATAAAGAATCATCTCCGATTCTCTAATGGGTTTGTGCGCAATGGACGATGCAATTTAGTCTGTAACTCTGCAATGTCTTTCTCCCCCCTTAGCTTCCATTCTCTTCCACGTCAGGATTTTCAATTCCACCATCGTTCACGTTTCTCCTCCCATGTCATCAACTGTTCTACTTTTAACTCAGAGGCGTCAATCTCTTCTAATAAGGCAAATGACGAACGAGTTATTGTATTGGTGATTGGTGGAGGAGGGAGAGAACATGCGCTTTGCTATGCACTGAAGCGCTCTCCTTCCTGTGATGCTGTGTTCTGTGCACCAGGCAATGCCGGGATTTCGAGCTCGGGCGATGCCACTTGTATTCCTGACCTCCATATCGACGACAGTGCTGCTGTCATTTCCTTTTGTCGAAAATGGAATGTAGGATTGGTTGTTGTAGGCCCTGAGGCCCCTCTTGTTGCAGGGCTTGCAAATGATTTAGTGAAGGCTGGGATTCCTACTTTTGGCCCCTCATCTGAGGCTGCTGCTTTGGAAGGCTCCAAAAATTTCATGAAGCGTTTGTGTGATAAATATGGAATCCCCACTGCAAAGTATCAATCCTTTACAGACCCTTCTGCTGCAAAGCAATATATTCAAGAACAAGGCGCCCCTATAGTCATCAAAGCAGATGGATTGGCTGCTGGAAAAGGAGTTGTTGTCGCTACGACATTGGAGGAGCCTTATGAAGCTGTTGATGCAATGCTTGTGAAGGGTGCTTTTGGTTCGGCCGGTGGTTGTGTCGTTGTGGAAGAATACCTAGAAGGAGAAGAAGCTTCCTTTTTTGCTCTTGTAGATGGAGAGAATGCCATACCCCTAGAATCTGCCCAGGATCATAAAAGAGTAGGGGACGGTGACACGGGACCTAATACAGGTGGTATGGGTGCTTACTCCCCAGCTCCTATCATAACAAGGGAGCTTCAAAGGATAGTCATGGAGTCTATAATTCTACCTACGGTAAAAGGAATGGCAGAAGAGGGTTGCAGGTTTGTTGGGGTTTTGTTTGCTGGCCTTATGATTGAGAAGAAGTCTGGCTTGCCAAAGTTGATTGAATACAACGTACGCTTTGGGGATCCGGAGTGTCAGGTGCTGATGGTTAGGTTGGAATCAGACCTTGCAAAAGTTCTTCTTGCAACATGTAGAGGAGAGCTAACTGGGGTTTCACTGAATTGGTCCCCGGGGTCTTCGATGGTGGTCGTGATGGCGAGCAAGGGCTATCCTGGGGCGTACGAGAAGGGAACTATGATTCAAAACCTCGAAGAAGCAGAGGTCGTTGCTCCATCTGTTAAGATATTTCATGCTGGCACTTCTTCCGACTCCGAAGGCAACTTCATTGCTGTTGGCGGGCGTGTTCTTGGGGTTGCTGCAAAAGGCAAAAACATCGAAGAGGCACGGGACAGAGCATACCAAGCAGTCGAGGAAATCCGTTGGTCGGGTGGGTTCTACAGGAAGGATATAGGGTGGAGAGCTCTAGAAAAGCAATTTTCTTTGCAGGAATAA

Protein sequence

MSCTTLSLGGGSFKFCSIDRGCQIKNHLRFSNGFVRNGRCNLVCNSAMSFSPLSFHSLPRQDFQFHHRSRFSSHVINCSTFNSEASISSNKANDERVIVLVIGGGGREHALCYALKRSPSCDAVFCAPGNAGISSSGDATCIPDLHIDDSAAVISFCRKWNVGLVVVGPEAPLVAGLANDLVKAGIPTFGPSSEAAALEGSKNFMKRLCDKYGIPTAKYQSFTDPSAAKQYIQEQGAPIVIKADGLAAGKGVVVATTLEEPYEAVDAMLVKGAFGSAGGCVVVEEYLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPIITRELQRIVMESIILPTVKGMAEEGCRFVGVLFAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAKVLLATCRGELTGVSLNWSPGSSMVVVMASKGYPGAYEKGTMIQNLEEAEVVAPSVKIFHAGTSSDSEGNFIAVGGRVLGVAAKGKNIEEARDRAYQAVEEIRWSGGFYRKDIGWRALEKQFSLQE

Homology

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BLAST of CmaCh16G007640 vs. ExPASy Swiss-Prot
Match: P52420 (Phosphoribosylamine--glycine ligase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PUR2 PE=2 SV=2)

HSP 1 Score: 738.8 bits (1906), Expect = 4.3e-212
Identity = 373/473 (78.86%), Postives = 418/473 (88.37%), Query Frame = 0


Query: 69  SRFSSH-------VINCSTFNSEASIS-SNKANDERVIVLVIGGGGREHALCYALKRSPS 128
           SRFSS+       ++ C +  S+ S+S  N  ++ERV VLVIGGGGREHALC+ALKRSPS
Sbjct: 59  SRFSSNRIQRRLFLLRCVSEESQPSLSIGNGGSEERVNVLVIGGGGREHALCHALKRSPS 118

Query: 129 CDAVFCAPGNAGISSSGDATCIPDLHIDDSAAVISFCRKWNVGLVVVGPEAPLVAGLAND 188
           CD+V CAPGNAGISSSGDATC+PDL I DS AVISFC+KWNVGLVVVGPE PLVAGLAND
Sbjct: 119 CDSVLCAPGNAGISSSGDATCVPDLDISDSLAVISFCQKWNVGLVVVGPEVPLVAGLAND 178

Query: 189 LVKAGIPTFGPSSEAAALEGSKNFMKRLCDKYGIPTAKYQSFTDPSAAKQYIQEQGAPIV 248
           LVKAGI TFGPSS+AAALEGSKNFMK LC KY IPTAKY++F+D SAAK+YIQEQGAPIV
Sbjct: 179 LVKAGILTFGPSSQAAALEGSKNFMKNLCHKYNIPTAKYKTFSDASAAKEYIQEQGAPIV 238

Query: 249 IKADGLAAGKGVVVATTLEEPYEAVDAMLVKGAFGSAGGCVVVEEYLEGEEASFFALVDG 308
           IKADGLAAGKGV VA  LEE +EAVD+MLVKG FGSAG  VVVEE+LEGEEASFFALVDG
Sbjct: 239 IKADGLAAGKGVTVAMELEEAFEAVDSMLVKGVFGSAGCQVVVEEFLEGEEASFFALVDG 298

Query: 309 ENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPIITRELQRIVMESIILPTVKGMAEEG 368
           ENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAP++T+ELQ  VMESII PTVKGMAEEG
Sbjct: 299 ENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQDFVMESIIHPTVKGMAEEG 358

Query: 369 CRFVGVLFAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAKVLLATCRGELTGV 428
           C+FVGVLFAGLMIEKKSGLPKLIE+NVRFGDPECQVLM+RLESDLAKVLLA C+GEL+GV
Sbjct: 359 CKFVGVLFAGLMIEKKSGLPKLIEFNVRFGDPECQVLMMRLESDLAKVLLAACKGELSGV 418

Query: 429 SLNWSPGSSMVVVMASKGYPGAYEKGTMIQNLEEAEVVAPSVKIFHAGTSSDSEGNFIAV 488
           SL+WS  S+MVVVMAS GYPG+YEKG++I+NLEEAE VAP VK+FHAGT  DSEGN +A 
Sbjct: 419 SLDWSKDSAMVVVMASNGYPGSYEKGSIIKNLEEAERVAPGVKVFHAGTGLDSEGNVVAT 478

Query: 489 GGRVLGVAAKGKNIEEARDRAYQAVEEIRWSGGFYRKDIGWRAL-EKQFSLQE 533
           GGRVLGV AKGK++EEAR+RAY AV++I W GGF+R DIGWRAL +KQ + +E
Sbjct: 479 GGRVLGVTAKGKDLEEARERAYSAVQQINWPGGFFRHDIGWRALRQKQVATKE 531

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BLAST of CmaCh16G007640 vs. ExPASy Swiss-Prot
Match: Q92RL0 (Phosphoribosylamine--glycine ligase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=purD PE=3 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 2.7e-137
Identity = 254/429 (59.21%), Postives = 307/429 (71.56%), Query Frame = 0


Query: 99  VLVIGGGGREHALCYALKRSPSCDAVFCAPGNAGISSSGDATCIPDLHIDDSAAVISFCR 158
           VL+IG GGREHAL + + +SP    ++ APGN GI+   +   I DLH ++   V+ FCR
Sbjct: 3   VLLIGSGGREHALAWKIAQSPRLTKLYAAPGNPGIA---EEAAIVDLHTENHEDVVDFCR 62

Query: 159 KWNVGLVVVGPEAPLVAGLANDLVKAGIPTFGPSSEAAALEGSKNFMKRLCDKYGIPTAK 218
              +  VVVGPEAPLVAGL + L  A IPTFGPS+ AA LEGSK F K LC +YGIPT  
Sbjct: 63  THAIDFVVVGPEAPLVAGLGDVLRAADIPTFGPSAAAAQLEGSKGFTKDLCARYGIPTGA 122

Query: 219 YQSFTDPSAAKQYIQEQGAPIVIKADGLAAGKGVVVATTLEEPYEAVDAMLVKGAFGSAG 278
           Y+ FTD   AK YI+E+GAPIVIKADGLAAGKGV VA +L+E + AVD     GAFG+AG
Sbjct: 123 YRRFTDAEPAKAYIREEGAPIVIKADGLAAGKGVTVAMSLDEAFAAVDECFA-GAFGAAG 182

Query: 279 GCVVVEEYLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPIITR 338
             VVVE YL+GEEASFF L DG++ +PL SAQDHKRVGDGDTGPNTGGMGAYSPAP++T 
Sbjct: 183 AEVVVEAYLDGEEASFFCLCDGKSVLPLASAQDHKRVGDGDTGPNTGGMGAYSPAPVMTA 242

Query: 339 ELQRIVMESIILPTVKGMAEEGCRFVGVLFAGLMIEKKSGLPKLIEYNVRFGDPECQVLM 398
           E+    M+ II PTV+GMAE G  F GV FAGLMI +K   P+LIEYNVRFGDPECQVLM
Sbjct: 243 EMVERTMKEIIEPTVRGMAESGYPFTGVFFAGLMITEKG--PELIEYNVRFGDPECQVLM 302

Query: 399 VRLESDLAKVLLATCRGELTGVSLNWSPGSSMVVVMASKGYPGAYEKGTMIQNLEEAEVV 458
           +RLESDL  +L A   G L G+   W   +++ VVMAS+GYPGAYEK T I  L +A   
Sbjct: 303 MRLESDLLPLLYAAATGTLEGMKAEWRDEAALTVVMASRGYPGAYEKDTPIAALPDA--- 362

Query: 459 APSVKIFHAGTSSDSEGNFIAVGGRVLGVAAKGKNIEEARDRAYQAVEEIRWSGGFYRKD 518
           + + K+FHAGT+    G  +A GGRVL V A GK + EA+D AY AV ++ W  GFYR D
Sbjct: 363 SAATKVFHAGTAMKG-GGLVAAGGRVLNVTATGKTVGEAKDAAYAAVRDVSWENGFYRND 421

Query: 519 IGWRALEKQ 528
           IGWRA+ ++
Sbjct: 423 IGWRAVARE 421

[Close]

BLAST of CmaCh16G007640 vs. ExPASy Swiss-Prot
Match: P52421 (Phosphoribosylamine--glycine ligase (Fragment) OS=Vigna unguiculata OX=3917 GN=PUR2 PE=2 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 4.3e-135
Identity = 238/291 (81.79%), Postives = 263/291 (90.38%), Query Frame = 0


Query: 224 DPSAAKQYIQEQGAPIVIKADGLAAGKGVVVATTLEEPYEAVDAMLVKGAFGSAGGCVVV 283
           DP   KQYIQEQGAPIVIKADGLAAGKGV VA TLEE Y+AVD+MLV+G FGSAG  V+V
Sbjct: 1   DPRVRKQYIQEQGAPIVIKADGLAAGKGVTVAMTLEEAYKAVDSMLVQGDFGSAGCRVIV 60

Query: 284 EEYLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPIITRELQRI 343
           EE+LEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAP++T+ELQ I
Sbjct: 61  EEFLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSI 120

Query: 344 VMESIILPTVKGMAEEGCRFVGVLFAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLES 403
           VM+SII+PTVKGM+ EG +FVGVL+AGLMIEKKSG+PKLIEYNVRFGDPECQVLMVRLES
Sbjct: 121 VMDSIIIPTVKGMSAEGSKFVGVLYAGLMIEKKSGMPKLIEYNVRFGDPECQVLMVRLES 180

Query: 404 DLAKVLLATCRGELTGVSLNWSPGSSMVVVMASKGYPGAYEKGTMIQNLEEAEVVAPSVK 463
           DL +VLLA CRGEL GVSL WSPGS+MVVVMASKGYPG+Y+KGT+I+NLEEAE VAP +K
Sbjct: 181 DLVQVLLAACRGELNGVSLKWSPGSAMVVVMASKGYPGSYQKGTVIENLEEAEAVAPGIK 240

Query: 464 IFHAGTSSDSEGNFIAVGGRVLGVAAKGKNIEEARDRAYQAVEEIRWSGGF 515
           IFHAGT+ DSEG FIA GGRVLGV AKG ++EEA DRAY AVE + W GGF
Sbjct: 241 IFHAGTAFDSEGRFIATGGRVLGVTAKGNDLEEACDRAYLAVENVNWPGGF 291

[Close]

BLAST of CmaCh16G007640 vs. ExPASy Swiss-Prot
Match: Q8G2B1 (Phosphoribosylamine--glycine ligase OS=Brucella suis biovar 1 (strain 1330) OX=204722 GN=purD PE=3 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 3.2e-130
Identity = 241/429 (56.18%), Postives = 313/429 (72.96%), Query Frame = 0


Query: 99  VLVIGGGGREHALCYALKRSPSCDAVFCAPGNAGISSSGDATCIPDLHIDDSAAVISFCR 158
           VL+IG GGREHAL + L  SP  + ++CAPGN GI++  +   + D+ +DD AA+I+F +
Sbjct: 3   VLLIGSGGREHALAWKLAASPLLEKLYCAPGNPGIAAVAE---LADIGVDDHAALIAFAK 62

Query: 159 KWNVGLVVVGPEAPLVAGLANDLVKAGIPTFGPSSEAAALEGSKNFMKRLCDKYGIPTAK 218
           + ++ LVVVGPEAPLV GLA+++   GI  FGPS  AA LEGSK F K LC ++ IPT  
Sbjct: 63  EKHIDLVVVGPEAPLVTGLADEMRAEGIRVFGPSRAAAQLEGSKGFTKDLCARFNIPTGA 122

Query: 219 YQSFTDPSAAKQYIQEQGAPIVIKADGLAAGKGVVVATTLEEPYEAVDAMLVKGAFGSAG 278
           Y  F +   AK YI++QGAPIV+KADGLAAGKGVVVA TL+E  +AVD+   +GAFG+AG
Sbjct: 123 YGRFNNAPKAKAYIRQQGAPIVVKADGLAAGKGVVVAMTLQEALDAVDSCF-EGAFGAAG 182

Query: 279 GCVVVEEYLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPIITR 338
             VVVEE+L+GEEASFF + DG+ A+PL SAQDHKRVGDGDTGPNTGGMGAY+PAP++T 
Sbjct: 183 AEVVVEEFLDGEEASFFCICDGKTALPLGSAQDHKRVGDGDTGPNTGGMGAYAPAPVMTP 242

Query: 339 ELQRIVMESIILPTVKGMAEEGCRFVGVLFAGLMIEKKSGLPKLIEYNVRFGDPECQVLM 398
           E+    M  +I PT++GMAE G  F G+LFAGLMI   S  PKLIEYN RFGDPECQVLM
Sbjct: 243 EMVARTMRELIEPTMRGMAEIGAPFSGILFAGLMI--TSDGPKLIEYNTRFGDPECQVLM 302

Query: 399 VRLESDLAKVLLATCRGELTGVSLNWSPGSSMVVVMASKGYPGAYEKGTMIQNLEEAEVV 458
           +RL SDL  ++ A   G L  VSL W    ++ VVMA++GYP   +KG++I++LE+ E +
Sbjct: 303 MRLNSDLLALINAAVDGRLDEVSLEWKDEPALTVVMAAEGYPANVKKGSVIRDLEKLESI 362

Query: 459 APSVKIFHAGTSSDSEGNFIAVGGRVLGVAAKGKNIEEARDRAYQAVEEIRWSGGFYRKD 518
              VK+FHAGT+   +G  +A GGRVL + A    + +A+ RAY+A++ I W  GFYR D
Sbjct: 363 -DGVKLFHAGTAL-KDGAIVAGGGRVLNITATAATVAQAQARAYEALKLIDWPEGFYRSD 422

Query: 519 IGWRALEKQ 528
           IGWRA+E++
Sbjct: 423 IGWRAVERE 423

[Close]

BLAST of CmaCh16G007640 vs. ExPASy Swiss-Prot
Match: Q8UHN3 (Phosphoribosylamine--glycine ligase OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=purD PE=3 SV=2)

HSP 1 Score: 464.9 bits (1195), Expect = 1.2e-129
Identity = 242/429 (56.41%), Postives = 303/429 (70.63%), Query Frame = 0


Query: 99  VLVIGGGGREHALCYALKRSPSCDAVFCAPGNAGISSSGDATCIPDLHIDDSAAVISFCR 158
           VL+IG GGREHAL + + +SP  DA++ APGN GI+   D   +  L ++D AAVI+F +
Sbjct: 3   VLLIGSGGREHALAWKIAQSPLIDALYAAPGNPGIA---DHATLVSLDVEDHAAVIAFAK 62

Query: 159 KWNVGLVVVGPEAPLVAGLANDLVKAGIPTFGPSSEAAALEGSKNFMKRLCDKYGIPTAK 218
           +  +  VV+GPEAPLVAGLA+DL  AGI TFGPS  AA LEGSK F K LC +Y IPT  
Sbjct: 63  EKAIDFVVIGPEAPLVAGLADDLRAAGIATFGPSKAAAQLEGSKGFTKDLCARYDIPTGA 122

Query: 219 YQSFTDPSAAKQYIQEQGAPIVIKADGLAAGKGVVVATTLEEPYEAVDAMLVKGAFGSAG 278
           Y+ F     AK Y++ QGAPIVIKADGLAAGKGV VA T  E   A+D     GAFG+AG
Sbjct: 123 YERFKAAEPAKDYVRAQGAPIVIKADGLAAGKGVTVAMTEAEALAAIDDCF-DGAFGTAG 182

Query: 279 GCVVVEEYLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPIITR 338
             VVVE +L+GEEASFF L DG+ A+ L +AQDHKRVGDGDTGPNTGGMGAYSPAP++T 
Sbjct: 183 TEVVVEAFLDGEEASFFCLSDGKTALALATAQDHKRVGDGDTGPNTGGMGAYSPAPVMTP 242

Query: 339 ELQRIVMESIILPTVKGMAEEGCRFVGVLFAGLMIEKKSGLPKLIEYNVRFGDPECQVLM 398
            +    M+ II PT+ GMA++G  F GV FAGLMI  K   P+LIEYNVRFGDPECQVLM
Sbjct: 243 AMVERTMKEIIEPTISGMAKDGNPFSGVFFAGLMITAKG--PELIEYNVRFGDPECQVLM 302

Query: 399 VRLESDLAKVLLATCRGELTGVSLNWSPGSSMVVVMASKGYPGAYEKGTMIQNLEEAEVV 458
           +RL+SDL  +L AT  G L  V   W   +++ VV+ASKGYPGAY+K T I ++ EA   
Sbjct: 303 MRLKSDLLPILYATATGTLDKVQAEWRDDAALTVVLASKGYPGAYDKNTPIAHIPEA--- 362

Query: 459 APSVKIFHAGTSSDSEGNFIAVGGRVLGVAAKGKNIEEARDRAYQAVEEIRWSGGFYRKD 518
           +   K+FHAGT+   +G  +A GGRVL V A G+N+ EA+ RAY   +++ W  GF R+D
Sbjct: 363 SEEAKVFHAGTAL-KDGKLVATGGRVLNVTAFGRNVTEAQARAYALADKVEWENGFCRRD 421

Query: 519 IGWRALEKQ 528
           IGW+A+ ++
Sbjct: 423 IGWQAIARE 421

[Close]

BLAST of CmaCh16G007640 vs. TAIR 10
Match: AT1G09830.1 (Glycinamide ribonucleotide (GAR) synthetase )

HSP 1 Score: 738.8 bits (1906), Expect = 3.1e-213
Identity = 373/473 (78.86%), Postives = 418/473 (88.37%), Query Frame = 0


Query: 69  SRFSSH-------VINCSTFNSEASIS-SNKANDERVIVLVIGGGGREHALCYALKRSPS 128
           SRFSS+       ++ C +  S+ S+S  N  ++ERV VLVIGGGGREHALC+ALKRSPS
Sbjct: 59  SRFSSNRIQRRLFLLRCVSEESQPSLSIGNGGSEERVNVLVIGGGGREHALCHALKRSPS 118

Query: 129 CDAVFCAPGNAGISSSGDATCIPDLHIDDSAAVISFCRKWNVGLVVVGPEAPLVAGLAND 188
           CD+V CAPGNAGISSSGDATC+PDL I DS AVISFC+KWNVGLVVVGPE PLVAGLAND
Sbjct: 119 CDSVLCAPGNAGISSSGDATCVPDLDISDSLAVISFCQKWNVGLVVVGPEVPLVAGLAND 178

Query: 189 LVKAGIPTFGPSSEAAALEGSKNFMKRLCDKYGIPTAKYQSFTDPSAAKQYIQEQGAPIV 248
           LVKAGI TFGPSS+AAALEGSKNFMK LC KY IPTAKY++F+D SAAK+YIQEQGAPIV
Sbjct: 179 LVKAGILTFGPSSQAAALEGSKNFMKNLCHKYNIPTAKYKTFSDASAAKEYIQEQGAPIV 238

Query: 249 IKADGLAAGKGVVVATTLEEPYEAVDAMLVKGAFGSAGGCVVVEEYLEGEEASFFALVDG 308
           IKADGLAAGKGV VA  LEE +EAVD+MLVKG FGSAG  VVVEE+LEGEEASFFALVDG
Sbjct: 239 IKADGLAAGKGVTVAMELEEAFEAVDSMLVKGVFGSAGCQVVVEEFLEGEEASFFALVDG 298

Query: 309 ENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPIITRELQRIVMESIILPTVKGMAEEG 368
           ENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAP++T+ELQ  VMESII PTVKGMAEEG
Sbjct: 299 ENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQDFVMESIIHPTVKGMAEEG 358

Query: 369 CRFVGVLFAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAKVLLATCRGELTGV 428
           C+FVGVLFAGLMIEKKSGLPKLIE+NVRFGDPECQVLM+RLESDLAKVLLA C+GEL+GV
Sbjct: 359 CKFVGVLFAGLMIEKKSGLPKLIEFNVRFGDPECQVLMMRLESDLAKVLLAACKGELSGV 418

Query: 429 SLNWSPGSSMVVVMASKGYPGAYEKGTMIQNLEEAEVVAPSVKIFHAGTSSDSEGNFIAV 488
           SL+WS  S+MVVVMAS GYPG+YEKG++I+NLEEAE VAP VK+FHAGT  DSEGN +A 
Sbjct: 419 SLDWSKDSAMVVVMASNGYPGSYEKGSIIKNLEEAERVAPGVKVFHAGTGLDSEGNVVAT 478

Query: 489 GGRVLGVAAKGKNIEEARDRAYQAVEEIRWSGGFYRKDIGWRAL-EKQFSLQE 533
           GGRVLGV AKGK++EEAR+RAY AV++I W GGF+R DIGWRAL +KQ + +E
Sbjct: 479 GGRVLGVTAKGKDLEEARERAYSAVQQINWPGGFFRHDIGWRALRQKQVATKE 531

The following BLAST results are available for this feature:

BLAST of CmaCh16G007640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52420	4.3e-212	78.86	Phosphoribosylamine--glycine ligase, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
Q92RL0	2.7e-137	59.21	Phosphoribosylamine--glycine ligase OS=Rhizobium meliloti (strain 1021) OX=26683...	[more]
P52421	4.3e-135	81.79	Phosphoribosylamine--glycine ligase (Fragment) OS=Vigna unguiculata OX=3917 GN=P...	[more]
Q8G2B1	3.2e-130	56.18	Phosphoribosylamine--glycine ligase OS=Brucella suis biovar 1 (strain 1330) OX=2...	[more]
Q8UHN3	1.2e-129	56.41	Phosphoribosylamine--glycine ligase OS=Agrobacterium fabrum (strain C58 / ATCC 3...	[more]

BLAST of CmaCh16G007640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09830.1	3.1e-213	78.86	Glycinamide ribonucleotide (GAR) synthetase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01209	GARS_A_3	coord: 200..394 e-value: 1.6E-130 score: 449.6
None	No IPR available	GENE3D	3.30.470.20		coord: 288..427 e-value: 3.9E-58 score: 197.2
None	No IPR available	GENE3D	3.40.50.20		coord: 98..192 e-value: 2.1E-31 score: 110.2
None	No IPR available	PANTHER	PTHR43472:SF4	OS12G0197100 PROTEIN	coord: 88..525
None	No IPR available	SUPERFAMILY	56059	Glutathione synthetase ATP-binding domain-like	coord: 201..424
IPR020560	Phosphoribosylglycinamide synthetase, C-domain	SMART	SM01210	GARS_C_2	coord: 428..524 e-value: 7.3E-46 score: 168.4
IPR020560	Phosphoribosylglycinamide synthetase, C-domain	PFAM	PF02843	GARS_C	coord: 430..522 e-value: 2.4E-28 score: 98.4
IPR013815	ATP-grasp fold, subdomain 1	GENE3D	3.30.1490.20		coord: 218..287 e-value: 2.4E-28 score: 99.7
IPR000115	Phosphoribosylglycinamide synthetase	TIGRFAM	TIGR00877	TIGR00877	coord: 99..525 e-value: 3.6E-161 score: 534.7
IPR000115	Phosphoribosylglycinamide synthetase	PANTHER	PTHR43472	PHOSPHORIBOSYLAMINE--GLYCINE LIGASE	coord: 88..525
IPR000115	Phosphoribosylglycinamide synthetase	HAMAP	MF_00138	GARS	coord: 97..524 score: 42.469376
IPR037123	Phosphoribosylglycinamide synthetase, C-domain superfamily	GENE3D	3.90.600.10		coord: 429..531 e-value: 1.0E-34 score: 120.4
IPR020562	Phosphoribosylglycinamide synthetase, N-terminal	PFAM	PF02844	GARS_N	coord: 99..199 e-value: 1.8E-30 score: 105.6
IPR020561	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain	PFAM	PF01071	GARS_A	coord: 200..394 e-value: 4.3E-81 score: 271.3
IPR020559	Phosphoribosylglycinamide synthetase, conserved site	PROSITE	PS00184	GARS	coord: 388..395
IPR011761	ATP-grasp fold	PROSITE	PS50975	ATP_GRASP	coord: 206..414 score: 39.139111
IPR011054	Rudiment single hybrid motif	SUPERFAMILY	51246	Rudiment single hybrid motif	coord: 428..524
IPR016185	Pre-ATP-grasp domain superfamily	SUPERFAMILY	52440	PreATP-grasp domain	coord: 99..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G007640.1	CmaCh16G007640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006189	'de novo' IMP biosynthetic process
biological_process	GO:0009113	purine nucleobase biosynthetic process
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004637	phosphoribosylamine-glycine ligase activity