CmaCh16G007540 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G007540
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description4-diphosphocytidyl-2C-methyl-D-erythritol synthase
LocationCma_Chr16: 4069142 .. 4077661 (-)
RNA-Seq ExpressionCmaCh16G007540
SyntenyCmaCh16G007540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCGGTCAAGCGTGGATAGAGAAAGAGAGATGGCAACTGTAAGCAATTTTCCTCGACTGAATTGCAGCTTCACATTTTCTTCTTCTTCCAAGGAATTCCCAAGCAAACAGCGGACAGTTCCGGCTATAATCCGGCCATCGATTTCTCATTCCAGCCTCCATTTTGCAGGTCAGTCCAAGCTAGTTTTCGTTTGTTGCATTGTGTTTGGCTCCTAAGAAATTTGGTCATGTTTGGATTTTGAAGTGCATGTAAGTCGAGAGGAATTTTTTTTACTTGTATTGGAAATGATCGAAGGGAGTGGACAATGCTTCCGGTTTATTGGCTATTCATTGAATGTTTTCTCTGTTTTCTGAAGCGATTTAGTAGTTTATATATTATTGTGACGATAATTTTTATGGTTTGGATATTTTCTTTTCGGATTTCCCCAGGCGTTCAGTTTAATTTTAATCGAAATGAGAAGTTTGTGAAATCGGTGATCAAATGCAGCGCTGCTGAAGTTGGGGATGTAAGTTAGACAGATTCCTGTTGCTAAATTGTACAGGGGGTGGTTTACTTTCTTACACTTGTACTATTTCTTGTTCTTGTTCTTGTTCGTTCGGTGTTCTTAAATTTTCTCTTTTAACAATCTTCAGGGGCCTGAGTTTGTGAAAGAAAAAAGTGTTTCTGTTGTTTTGTTGGCTGGAGGCAAGGGAAAAAGGATGGGTGTGAGTTTCTAATTATTTAATCATTTGACTACTTGTATATTGATGTGCATGCAATAAATGTTTGGAATCTCTGTGCAATTAGGCAAGCATGCCAAAGCAGTATCTTCCACTTCTAGGTCAACCAATTGCGTTGTACAGGTAAAATATAAATTAAAATGTCCTTGTTCAGTTTTTCACAGTTCCATGTGGACAATTTTAGCTTGCATATTCGTATGGATTTGAAGAAGTTAAAGCTTCCTAATGATTTGTGGTCTGTTTCTGGTCTAGGTGCAACATTTTTCTGTATGTCCGTAGCAAGGAGAGGCTTTACTTGAAATTAATCAATCAAATAACTATTTGGCCTGAGACATTCCTAATTTTTTAGAGAACATTATGCATCCAAAAATTATCAGATGGATCCCAATCAATATATTCTTTAGGCAAGCATGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAGAAAAAAGTCATATGTATCTGCCTAAGGTAAGATATAAAGAGATGTGCTTGCAGTCTAAGTAGTTGTTTGAGGCTATCAGTTTCAAATCACATGTACGATTGGTCTCAATGCTCATTTTATGGTTAATTTTGATTAGTTCTGCATTTTTTGTGAATTACCAAACGGAATACAAGGATTGTGCACACCTATTTGCTGGCATGGTTAGCCTTCCACAGCTGGGCTGAATGGTGTTTTTGCAATCCCTGTTTCAAGCTTTACTTAGCCATACCTTTTTAAAAAAGGCAACAATCCTCTTGATAAATGCAATGCTTGCTATTTTGTCGAAGGTGTGGCTTAAAAGAATAGAAGGTTTGTCCATGATGTGAAGAAATGTTTAGAGGAGCCTAGGTTTTCCTTCATTTTTTAAATTAAGGGTTTTCCTGTCAAGGAAAATACAGAACTCACATAAACATCTCATTTGACAGTTTCTGATTTTGACCTGATTCATACTTGCATACTTGGTTTTTCTAAGGGCAGTTATCCAGTGACGCTCTCCTAAGCCTTGATAGCTAGCTTCTGCGAACCTTTAATTTATTATGACACATCTTTTGAAGCTTATAAGCACTTAAATGGTGACTTAATGCAGCTTGTACACTTTCTCACGTATGATTGAGGTTAAAGAAATCGTCGTGGTTTGCGATCCTTCTTATCGGGATATTTTTGAAGGTTTTTTAGTTTTTTTCTTTCTTTTTATCTCTCACCAAATGCCTCCAAATTTGTATTCCAGCTCATGCATTAATTAATTTATTTTTTCCTGCTCTTAGATGTCAAAGAGAAGATTGATATTCAACTCAAGTTCACACTTCCAGGAAAGGAGAGACAAGATTCTGTGTACAGTGGCCTTCAGGTCAGGTGGACGCTCATAATTTTCTGTTTTGTTTTCCTGGTGGTGATGACAAGCATGATTTATTAACAAAAGGAATTAGAAGGCATGGAGACTCTCGCAAAACAGCCAAAGGATGTATAAAAACACTTTCCAGTTTACAGCAAAGGAAGGAATATAATATAATAGAAATTATATTAAAAACTGCACATACACTTGGATCATGCAGATTCTTGATGTTTGATGTGATATGTCATTAGATTTTCCGGGATGAATTCACTTTTTTTTTTATAATGTTGTGCCTCATGCTGTTTCTTTTTTCTCCCATTATCTTATAGCTTTTTGCTACCATTTGTATTCACAGGCAATTGATTCGAACGCAGAGCTTGTGTGCATCCATGATTCTGCCAGACCTCTTGTATTAGAAGGAGATATTCAAAAGGTTGCTTTCTCATTCTTATTAATCACCTGGAACATGTACTTTTTTTGTTGCTTGTCATATATGTCAAAATTATAATTTAATGATAAATGATTTCGAGATTTTGGTATGGCCAGCAAAATATTAACAGAAGAATTTTTCAGGAGGAATGAAGGGTGTGGATAAAGTTTTTTGGTTTCTACCCCTTTTGGAACTTCTTTATTGAGTTCTTCCCATAAATAGTTCTTCTTGATAGGTTTAGGAAACCAAAAGGACTTCATGTGGGGTGGGGATAACCTAAAGGCCATAGGAACGAGACGACCAATGCTGGTTGCTGCATGTGAGGAATCTTACTGCAAAAAGTTCTATGATAATTTTCCTTCCATCATCGCTTCCAATTCATAAAAGACTGTTCGTTTTCTCAGTTTCTCAATTTAAAAAAACTACTGTTTATGTTGCTGATAGAAAATGGAATGGTCTGAAAGTCATTAAAAACATAATTTCTCATGTGAAGTCATTTGATTTAATTGTATCAAATATTTGAGATGTAAACGTTAACATGAGCATGTCGGAATAAAGAAAATTTGGGATAGGCAGTGCTTGACATACATACATACATAATTAGGAATATTGGACTTCATGTAGAATATGTACAAATTCGGCAAATTTTACCGTTATGTTCTATTCTGTCTGTGAGTATATCAGGACTTTTATTGCAACGCTCTCTCTTAAACCTTATGAACTTAACCTAGATTAGGCTCATTTAATGATATATTGTTTCTTTACTTCTAGGTTTTCAAAGATGCTAGGTTGAATGGGGCTGCTGTGCTTGGGGTTCCTGTTAAAGCTACAATAAAAGAGGTATATGTTGGGACTTATTCTATCATTATCATTCCCCTTTGGATGCCTTTGGTTTCTTTTATTTTCTAGAAGTTGTCTAACATAGGTATGTTAAATGAAAAACCAAGGGCTATGCTTTACTAATCAGCTTTACTTTCACGAAAGTTGGTTTCACATTCGAAAAAGAAGAATGCATTTAATTCTCATTTCAAAGGCTTGTTTTAAAACGTTACCAAACCAACCACCATCGGTTATCCTAGAATTTAATATCTTAGGACTGAAGTTTCTTGGCAACTAAATGTAGCTGGCTCAGATGGTTATCCCGTGAGATTAATTGAGGTATGTGAAAGTTGGCTTGGATACTCTCTCCATTGGTATGAGTCATTTTGGGGAAGCCCAAAGCAAAGTCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTTGTGTTCATCTAACACTCCCAACCTACTCAGTTGAACTGATTTATTTGATTTTATAAGTTGCCAACTTCTCTATTGCTTTGGCTGAACTTTTACTGAACTTGGTCAGTAAAAGTATTATCCATCTGCATACCTTCTGGCTTGCTTTTTGCCTGGTAGATTCTTCTGTTACCTGGTACCTCCTCTCCGCCTACCTCGCTATCAATCCACGTCCTGTCAATTATCCTTGCCACTCTGTTTTGTTTTTCTTTAACTCAGAGATGCCATCACCCTTTTTTCTCTGTCTTGGTCCAGTTCAATCCGGAGGGAAAAAAATTAAAGCCCACCCTCACCTTTTTCTACCATGTCCTCACCCTCAAAACTATTTTGAATAATGCATTCATCCATGTATATTTTCTTATTTGTTCACTCCCATAATTTCTTAAATATTTTCATATTTTCTTTATCCTACCGTGCCTTCACCCTCAAATCCTTCAAATTTAACGTTTTCTTTTTGTGGGAACTTAATCATACAAGCTTAAACACTTATGGTACTACATAGATGTCTCTCTGGCTTATCATCTATCCTGGATGGCGTTCCCTCTGCAGAAATGATGCTGAAACACAAAGCCATGTCTTTCATGATTGTTCATACGCTAAAAAATTTAGGGACCTCGCTCCTACCTTTAATTGGATAGTGGTGCTTCCTATGAACCTCAACCTTCTTGTTTCCCATACATTAACTGGACTTCCCTTCAAAAGTCACAAAAAGATTTATTCCACACTATTTCATCATTCCTTCAGCAATTTTGGCTTGAAAGGAACAACATAATTTTTTAATGATAAAGACATACTCGAACTTTACTCTATGATGGACAATTTGAGATTTTGTTGAAAATCTTTATTTTTTGTTCCTTGGAGTAAAGATGTCTCCCCATTCAACATTATAGTTTGAATTCTCAATTAGCCAATGGAAGGATTTTTTAAACTTGGTTCTGGGGCCTGGTTCTCCTGCCCGGCTCCCCATTTCTTTTGTAATTTCATTCTATTAAGGGTCATTGATCTTTCCTTAATTATTTGTCTTACTGCATGGGCTTATATTAGATTTTATGGGGCATATCTCAGAAGTATAGGTTGCTTCGGGACTATGATGATATAAGAACCTCTTCAAAGTGGTACTCAAAAAAGAAAAAAAAAAAAAAACTCTTAGAAGTTATCTTTCTACAATTTTAATTTTCTACATTTTACATTGACGAAGCCTCTTGAATTTCTAACATTTTGCTTTATTACGCTGTCACTTTGTTAAAGCAATAATGTGCATTTAGATTTTTTAATATTTTATTTTATTTTTAATGACATACAATTTCATTGATATTTGAAATTTACAAAAGGGATGTGTTATCTATGATACTTACAAAAAAAAATTCCCAATTTACAAGGAGGGAGGTATGACTATAAGAAGCAAAAATATTAGACAAAAATTTTGACTCCGAAAAAAAGAATTTTGTCACCCATATTCTTTATTCCAAAAAAAAAAGTAGACTAATTTCAGATAGGCCAATCCTGTTGCTACTCACACGGCAGTAAATATATAGATACGTCATTTATTCGTATTGCGAGTATTTCAATTGTGTAACAATTTGTTGCCGTTTCTTAACAATTCTCCAATTATTTTTCAGGCGGATGATGATCGTTATGTCCAAAGAACCTTGGACAGGAAAACTCTTTGGGAAATGCAAACTCCGCAGGTTTGCTGACAATTTGCATATATGACGTGCTATCTTTTGTGGAATCTGTTAGGATTTAACACATGCAGATTAATTTAGCATTTCATCGCTCTTTACAGGTTATTGAGCCTGAGTTGCTTAGGAAAGGGTTTGAGCTTGTGAACAGGTATTTATTTATTTTTCATTTATTTTCTCGCCTTATCTATAAGGAAACACGACAGCCACACTTTCTAGTACTGGACTAGTTGAGAGACATGGTCGGAAGGAGAGCTAATAAAATATTTTGAGTGCCGCAAGACATGGTCCTCACTCACATTCATCCTAGGAAAATTCCTAGGTCACCCGACATAGAATTGTTCCAAGTAAAGCACACTTAACCATGAAGTTCCTAGGATTGAGCCACCGAAAAGGAAGGTGCACTTTGTTGGTAGTAACTTTCCTTTCGTTTTAAGTTTTTCTTAGTCATCCTATCCTTAGGATCGCTTTCATTCAGATGTGATCTCAATTCATTCATGCACCGCTCTTTTATTCGGGTTTCACATGCCCACCAGCCATGTATGTTATCTTTACCGACTCATTGCTTCTTAAGAGTGAAGACTAAACCTGGAATCTAAACTACAAAGAATTGTAAAGAAACTTAGATCTTTACGAAAGGAAAGCAAAAATGCTCTTTTTACTACATTTTCCAAGTTTCCCCTACAAAGATAACAAACATGGTTTTATATAGCCTCAAAATGAAACCCTTAACCTTACCTGAGACATGTCAAGAGTTTGTAACCTTAATACTTTTTGACCATAATTAGTCACTATGTAAATGTAACCTAAAAATAAATAAAAAGTCTTAAAACTTAAAATACATTAATAAAACACAAAAAAATCTAAATTTTAATCATCTATCATAAATTTGTAACTATATTCTTTTAATCATCTATCATAAATTTGTAGCTATCTAAGAATAAATGAAGCACATTTGAAGTTGAAGTATCTTGAAGCCTTATTGTATAAATTAGACTTGATTCTTCTTAATGTGAAATTGATTGTAACTTGAGTTCAATTTTAATATAACTTGGCTTTATCTTATGGTAATTTGAACAACATTCTTCACAACTTCCCTCGAGTTCATATTGTATAATTGAGATTTCTTGGTTCATATCCAGAAGGCTGGTTGTAACGGTCCAGGCCCATTGCTAGCCGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCTCCTCAAGGTTTTTTAAAACACATATGCTAGGGAGAGGTTTCCACCCTTATAAAAGGTGTTTCGTTTTCTTTTCCAACCAATGTGTGATGGTTGTATCCTCATATTGGATTATGAAAAAGCTTATGACAAAGTGGACATGTGTTTACCTTGATGGGTGCTTGATAAAAAAAGGCTTCACTAAGTGGTGGAGAAACTGGTTTTGGGGTTGCTTGTCCATTGCAAACTTCTCGGTTATAATAAATGGGAGACGAGAGGTAAAATTGAGGCTAAAAGAGAGTTGAGACAAAGGGATTCTCTCTCCCTTCTTAGTTAATTCAATACTTCTGCCAGCGTAGAATCCTCGAAGACTTTTTCGTTGAAAGGAATGATATTGAAATTTCTCCTCTCCGATATGCTAGTAATACAATAATTTTTGTCCAAATCAGGCTATTTTTTGTGAAAACTGTTGGGCCTTAATAACTTTGTTTCTCCATGCTTCTGTCTCTCTTAATCTAGCTAAGACTGCTATTATCAACGTTAATGTTGAGAACGAGGTGCTGAATGGTATGCTAAAAGTTTTGGTTGCAAGATTGATACTTTTTCTTTCTATTATTTGGGCTTCCCTGGGGCTTTAGAAAGAAGTCTGTGCTCGAAAATTTTACTAGAAGAATTGAGAAATTAGAGCAAGATTTGAAGGAAGATCCCCTAAGATTCGAGAAAGAAAGCAATAAAGATCACCTTTTGACTTTATTGGAGTTGGTTGTTAAGGGAACTTACCAGAAGTATCACGTTTAGAAAGGTTTATTGTTCCTATTGGCATATTAGCATACCTACTGACCCCAGGCAAACCTTCCTCTCAAGACCTAGGCACAACCTTCCACTTAGCTAAATGAGGTGGGAGGTCCGTTTATCAACAATCCATGTGAATGAAGTCTATATCTAAAGAATAGACATGTTGTGTCTCTTAGGAACCACGACTTTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGCTTTGCTTTTGCTTTCCCTAAGAGGCCTAATACCAATGGAGATGTATTCCTTACGTATAAACCCGTGATCAACCCCTTAACTAGCCGATGTGGGACACCTCTCACAACCATCCTCAAAAGTGTCAATATTTCATTGATAAAGCTACATAGTAGTATAATTCAAAGTCATATAGGAGTCTAATTCGAAGTCTTTGTACATAGCGATCTACTAATATATGTTTTTATGAACGAACGTGCTACCCATTTTCCATCAGTAACGGCTTGGAAGTAACAGATGACGTTTCCATTGTGGAGCACTTGAAACATCCCGTGCTCATAACTGAAGGGTCTTATACCAATATCAAGGTATTCAATAAGAAAGAATCTTATCATACATTTAGGAACCATCCATTTGATTTGAATTTCTTATATAGAGAAAGTAAAGTTTGTTATCCAGAACTGTCCGGTAATAAAAGAGCTGCCTCTTTGCAGGTAACAACACCTGATGATTTATTACTTGCAGAGAGAATATTGAATTTGAGTTCGTGAAAGTCTTCTTCAGGGGTCTAAATAACTATTATCCTGACCTCTAAATAATCAAAATACCTTATTATTTTCTCCCCATTTCTGAAGTAGAAATGATGTAATTCAATATTCAATTATGTCATAATGTGAATGAGCATGATGTCGGCTTCTGAAATAAAAGTTCGAGCATGAATGGTTGTGTTGACGAGGTAGAGGCGAAGCTAGATGGAATGAGTATCCAAAAAATCTTGTTTCTTCGATTTGTATTGTGTTAAATTACATGTTTAATCTCTTCGAACTTTTGGATTTGTATCGAGT

mRNA sequence

CTCGGTCAAGCGTGGATAGAGAAAGAGAGATGGCAACTGTAAGCAATTTTCCTCGACTGAATTGCAGCTTCACATTTTCTTCTTCTTCCAAGGAATTCCCAAGCAAACAGCGGACAGTTCCGGCTATAATCCGGCCATCGATTTCTCATTCCAGCCTCCATTTTGCAGGCGTTCAGTTTAATTTTAATCGAAATGAGAAGTTTGTGAAATCGGTGATCAAATGCAGCGCTGCTGAAGTTGGGGATGGGCCTGAGTTTGTGAAAGAAAAAAGTGTTTCTGTTGTTTTGTTGGCTGGAGGCAAGGGAAAAAGGATGGGTGCAAGCATGCCAAAGCAGTATCTTCCACTTCTAGGTCAACCAATTGCGTTGTACAGCTTGTACACTTTCTCACGTATGATTGAGGTTAAAGAAATCGTCGTGGTTTGCGATCCTTCTTATCGGGATATTTTTGAAGATGTCAAAGAGAAGATTGATATTCAACTCAAGTTCACACTTCCAGGAAAGGAGAGACAAGATTCTGTGTACAGTGGCCTTCAGGCAATTGATTCGAACGCAGAGCTTGTGTGCATCCATGATTCTGCCAGACCTCTTGTATTAGAAGGAGATATTCAAAAGGTTTTCAAAGATGCTAGGTTGAATGGGGCTGCTGTGCTTGGGGTTCCTGTTAAAGCTACAATAAAAGAGGCGGATGATGATCGTTATGTCCAAAGAACCTTGGACAGGAAAACTCTTTGGGAAATGCAAACTCCGCAGGTTATTGAGCCTGAGTTGCTTAGGAAAGGGTTTGAGCTTGTGAACAGTAACGGCTTGGAAGTAACAGATGACGTTTCCATTGTGGAGCACTTGAAACATCCCGTGCTCATAACTGAAGGGTCTTATACCAATATCAAGGTAACAACACCTGATGATTTATTACTTGCAGAGAGAATATTGAATTTGAGTTCGTGAAAGTCTTCTTCAGGGGTCTAAATAACTATTATCCTGACCTCTAAATAATCAAAATACCTTATTATTTTCTCCCCATTTCTGAAGTAGAAATGATGTAATTCAATATTCAATTATGTCATAATGTGAATGAGCATGATGTCGGCTTCTGAAATAAAAGTTCGAGCATGAATGGTTGTGTTGACGAGGTAGAGGCGAAGCTAGATGGAATGAGTATCCAAAAAATCTTGTTTCTTCGATTTGTATTGTGTTAAATTACATGTTTAATCTCTTCGAACTTTTGGATTTGTATCGAGT

Coding sequence (CDS)

ATGGCAACTGTAAGCAATTTTCCTCGACTGAATTGCAGCTTCACATTTTCTTCTTCTTCCAAGGAATTCCCAAGCAAACAGCGGACAGTTCCGGCTATAATCCGGCCATCGATTTCTCATTCCAGCCTCCATTTTGCAGGCGTTCAGTTTAATTTTAATCGAAATGAGAAGTTTGTGAAATCGGTGATCAAATGCAGCGCTGCTGAAGTTGGGGATGGGCCTGAGTTTGTGAAAGAAAAAAGTGTTTCTGTTGTTTTGTTGGCTGGAGGCAAGGGAAAAAGGATGGGTGCAAGCATGCCAAAGCAGTATCTTCCACTTCTAGGTCAACCAATTGCGTTGTACAGCTTGTACACTTTCTCACGTATGATTGAGGTTAAAGAAATCGTCGTGGTTTGCGATCCTTCTTATCGGGATATTTTTGAAGATGTCAAAGAGAAGATTGATATTCAACTCAAGTTCACACTTCCAGGAAAGGAGAGACAAGATTCTGTGTACAGTGGCCTTCAGGCAATTGATTCGAACGCAGAGCTTGTGTGCATCCATGATTCTGCCAGACCTCTTGTATTAGAAGGAGATATTCAAAAGGTTTTCAAAGATGCTAGGTTGAATGGGGCTGCTGTGCTTGGGGTTCCTGTTAAAGCTACAATAAAAGAGGCGGATGATGATCGTTATGTCCAAAGAACCTTGGACAGGAAAACTCTTTGGGAAATGCAAACTCCGCAGGTTATTGAGCCTGAGTTGCTTAGGAAAGGGTTTGAGCTTGTGAACAGTAACGGCTTGGAAGTAACAGATGACGTTTCCATTGTGGAGCACTTGAAACATCCCGTGCTCATAACTGAAGGGTCTTATACCAATATCAAGGTAACAACACCTGATGATTTATTACTTGCAGAGAGAATATTGAATTTGAGTTCGTGA

Protein sequence

MATVSNFPRLNCSFTFSSSSKEFPSKQRTVPAIIRPSISHSSLHFAGVQFNFNRNEKFVKSVIKCSAAEVGDGPEFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDSNAELVCIHDSARPLVLEGDIQKVFKDARLNGAAVLGVPVKATIKEADDDRYVQRTLDRKTLWEMQTPQVIEPELLRKGFELVNSNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERILNLSS
Homology
[Close]
BLAST of CmaCh16G007540 vs. ExPASy Swiss-Prot
Match: P69834 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISPD PE=1 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.0e-97
Identity = 182/244 (74.59%), Postives = 206/244 (84.43%), Query Frame = 0 

Query: 63  IKCSAAEVGDGPE-FVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSR 122
           IKCS++   D     VKEKSVSV+LLAGG+GKRM  SMPKQY+PLLGQPIALYS +TFSR
Sbjct: 59  IKCSSSTGFDNSNVVVKEKSVSVILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSR 118

Query: 123 MIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDSNAELVCIH 182
           M EVKEIVVVCDP +RDIFE+ +E ID+ L+F +PGKERQDSVYSGLQ ID N+ELVCIH
Sbjct: 119 MPEVKEIVVVCDPFFRDIFEEYEESIDVDLRFAIPGKERQDSVYSGLQEIDVNSELVCIH 178

Query: 183 DSARPLVLEGDIQKVFKDARLNGAAVLGVPVKATIKEADDDRYVQRTLDRKTLWEMQTPQ 242
           DSARPLV   D++KV KD    GAAVLGVP KATIKE + D  V +TLDRKTLWEMQTPQ
Sbjct: 179 DSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQTPQ 238

Query: 243 VIEPELLRKGFELVNSNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERIL 302
           VI+PELL+KGFELV S GLEVTDDVSIVE+LKHPV +++GSYTNIKVTTPDDLLLAERIL
Sbjct: 239 VIKPELLKKGFELVKSEGLEVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERIL 298

Query: 303 NLSS 306
           +  S
Sbjct: 299 SEDS 302

[Close]
BLAST of CmaCh16G007540 vs. ExPASy Swiss-Prot
Match: Q5N8G1 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ISPD PE=2 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 3.6e-94
Identity = 174/238 (73.11%), Postives = 202/238 (84.87%), Query Frame = 0 

Query: 65  CSAAEVGDGPEFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIE 124
           C+A   G   E VKE+SVSVVLL+GG+GKRMGASMPKQYLPLLG PIAL+SL TF ++ E
Sbjct: 58  CAAKADGAQGEAVKERSVSVVLLSGGQGKRMGASMPKQYLPLLGLPIALHSLKTFCQLKE 117

Query: 125 VKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDSNAELVCIHDSA 184
           VKE+VVVCDP Y+DIFE   E + I +KF LPGKERQDSVY+GLQ ID ++ELVC+HDSA
Sbjct: 118 VKEVVVVCDPDYKDIFEGSIENVQIPIKFALPGKERQDSVYNGLQEIDGDSELVCVHDSA 177

Query: 185 RPLVLEGDIQKVFKDARLNGAAVLGVPVKATIKEADDDRYVQRTLDRKTLWEMQTPQVIE 244
           RPLV   D++KV +DA ++GAAVLGVPVKATIKEAD + +V +TLDRKTLWEMQTPQV+ 
Sbjct: 178 RPLVSSEDVKKVLEDAIVHGAAVLGVPVKATIKEADSNSFVVKTLDRKTLWEMQTPQVMR 237

Query: 245 PELLRKGFELVNSNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERILN 303
           P LLR GFELV  +GLEVTDDVSIVE+LKH V ITEGSYTNIKVTTPDDLLLAER++N
Sbjct: 238 PSLLRDGFELVKRDGLEVTDDVSIVEYLKHSVYITEGSYTNIKVTTPDDLLLAERLMN 295

[Close]
BLAST of CmaCh16G007540 vs. ExPASy Swiss-Prot
Match: Q6MEE8 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=ispD PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 5.4e-50
Identity = 106/219 (48.40%), Postives = 148/219 (67.58%), Query Frame = 0 

Query: 83  SVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSYRDIFED 142
           +VVLLAGG G RM   +PKQYL +  +PIAL+S    + M E+++++VVC+P Y  +F  
Sbjct: 9   TVVLLAGGMGTRMKNLIPKQYLTIQEKPIALHSFEKLASMPEIEQMIVVCEPQYEQLF-- 68

Query: 143 VKEKIDIQLKFTLPGKERQDSVYSGLQAIDSNAELVCIHDSARPLVLEGDIQKVFKDARL 202
              K++  L F  PG  RQDS+++G++ I  N  LVCIHDSARP +    I++   +A  
Sbjct: 69  TVYKLNKPLIFARPGLRRQDSLWNGIKLIAGN-PLVCIHDSARPFIEIDRIRQTVAEAEK 128

Query: 203 NGAAVLGVPVKATIKEADDDRYVQRTLDRKTLWEMQTPQVIEPELLRKGFELVNSNGLEV 262
            GAAVLGV VKATIK  ++ +++  T +R  LWEMQTPQ++  +LL  GF +   N L V
Sbjct: 129 WGAAVLGVRVKATIKICEEKQFIVNTPNRAFLWEMQTPQIVRLKLLYDGFSVAQKNELTV 188

Query: 263 TDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERIL 302
           +DDVS+VE +  PV + EGSY NIK+TTP+DLL+A+ IL
Sbjct: 189 SDDVSLVELIDKPVKVVEGSYLNIKITTPEDLLIAQSIL 224

[Close]
BLAST of CmaCh16G007540 vs. ExPASy Swiss-Prot
Match: Q8R7S6 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=ispD PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.9e-43
Identity = 98/224 (43.75%), Postives = 135/224 (60.27%), Query Frame = 0 

Query: 81  SVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSYRDIF 140
           +VS V++A G+  RM  S+ K YL + G+P+  YS+  F  +  +KEI+VV  P   +  
Sbjct: 2   NVSAVIVAAGRSTRMNKSLNKVYLSIAGKPVLYYSIKAFDEIEWIKEIIVVTSPEETEYC 61

Query: 141 -EDVKEKI--DIQLKFTLPGKERQDSVYSGLQAIDSNAELVCIHDSARPLVLEGDIQKVF 200
            E+V EK   +   K    G+ERQ SVY+G+  +D + E+V IHD ARPLV +  I +  
Sbjct: 62  QENVLEKFYWNKPFKIVKGGEERQYSVYNGISVVDKDCEIVAIHDGARPLVTKEIIMEAI 121

Query: 201 KDARLNGAAVLGVPVKATIKEADDDRYVQRTLDRKTLWEMQTPQVIEPELLRKGFELVNS 260
           K A L  AA +GVPVK TIK AD+D ++  T DR+ LW +QTPQV E EL+ K       
Sbjct: 122 KAAYLYKAAAVGVPVKDTIKVADEDNFILDTPDRRYLWAIQTPQVFEKELIVKAHRKALE 181

Query: 261 NGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERIL 302
            G   TDD  +VE +   V + EG Y NIK+TTP+DL++AE  L
Sbjct: 182 EGFLGTDDSVLVERMGFKVKLVEGDYKNIKITTPEDLVVAELFL 225

[Close]
BLAST of CmaCh16G007540 vs. ExPASy Swiss-Prot
Match: A4J0Y3 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Desulfotomaculum reducens (strain MI-1) OX=349161 GN=ispD PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-39
Identity = 89/224 (39.73%), Postives = 135/224 (60.27%), Query Frame = 0 

Query: 81  SVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSYRDIF 140
           ++  V+ A G G RMG  + KQYL L  +PI  +++    ++ ++  IV+V  P    + 
Sbjct: 3   NIVAVIPAAGMGSRMGTEVKKQYLKLQDRPILAHTIDALEQVPDITGIVLVVSPGEETLC 62

Query: 141 ED--VKEKIDIQLKFTLPGKE-RQDSVYSGLQAIDSNAELVCIHDSARPLVLEGDIQKVF 200
           ++  +K  +  ++   +PG + RQ SVY GL ++  + ELV IHD ARPLV   +I  + 
Sbjct: 63  QELILKGNLFNKIMAVVPGGDHRQTSVYHGLCSLPGDTELVVIHDGARPLVQRAEISHII 122

Query: 201 KDARLNGAAVLGVPVKATIKEADDDRYVQRTLDRKTLWEMQTPQVIEPELLRKGFELVNS 260
           K+AR  GAA L VPVK T+K  +D  YV  T +R+ LW +QTPQV   EL+ K  +    
Sbjct: 123 KEARRVGAAALAVPVKDTVKLVNDQGYVIATPNREKLWAVQTPQVFNYELILKAHQDARE 182

Query: 261 NGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERIL 302
            G+  TDD ++VE L  PV + +GSY NIK+TTP+D+++A+  L
Sbjct: 183 KGVYATDDCALVEALGQPVKLVQGSYENIKITTPEDMVMAQAFL 226

[Close]
BLAST of CmaCh16G007540 vs. TAIR 10
Match: AT2G02500.1 (Nucleotide-diphospho-sugar transferases superfamily protein )

HSP 1 Score: 357.1 bits (915), Expect = 1.4e-98
Identity = 182/244 (74.59%), Postives = 206/244 (84.43%), Query Frame = 0 

Query: 63  IKCSAAEVGDGPE-FVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSR 122
           IKCS++   D     VKEKSVSV+LLAGG+GKRM  SMPKQY+PLLGQPIALYS +TFSR
Sbjct: 59  IKCSSSTGFDNSNVVVKEKSVSVILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSR 118

Query: 123 MIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDSNAELVCIH 182
           M EVKEIVVVCDP +RDIFE+ +E ID+ L+F +PGKERQDSVYSGLQ ID N+ELVCIH
Sbjct: 119 MPEVKEIVVVCDPFFRDIFEEYEESIDVDLRFAIPGKERQDSVYSGLQEIDVNSELVCIH 178

Query: 183 DSARPLVLEGDIQKVFKDARLNGAAVLGVPVKATIKEADDDRYVQRTLDRKTLWEMQTPQ 242
           DSARPLV   D++KV KD    GAAVLGVP KATIKE + D  V +TLDRKTLWEMQTPQ
Sbjct: 179 DSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQTPQ 238

Query: 243 VIEPELLRKGFELVNSNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERIL 302
           VI+PELL+KGFELV S GLEVTDDVSIVE+LKHPV +++GSYTNIKVTTPDDLLLAERIL
Sbjct: 239 VIKPELLKKGFELVKSEGLEVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERIL 298

Query: 303 NLSS 306
           +  S
Sbjct: 299 SEDS 302

The following BLAST results are available for this feature:
BLAST of CmaCh16G007540 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P698342.0e-9774.592-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Arabi... [more]
Q5N8G13.6e-9473.112-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Oryza... [more]
Q6MEE85.4e-5048.402-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Protochlamydia amoeb... [more]
Q8R7S64.9e-4343.752-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Caldanaerobacter sub... [more]
A4J0Y31.1e-3939.732-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Desulfotomaculum red... [more]
BLAST of CmaCh16G007540 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G02500.11.4e-9874.59Nucleotide-diphospho-sugar transferases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 300..305
NoneNo IPR availablePANTHERPTHR321252-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTICcoord: 19..304
NoneNo IPR availablePANTHERPTHR32125:SF42-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTICcoord: 19..304
IPR034683Cytidylyltransferase IspD/TarIPFAMPF01128IspDcoord: 82..302
e-value: 7.1E-58
score: 195.9
IPR034683Cytidylyltransferase IspD/TarICDDcd02516CDP-ME_synthetasecoord: 82..297
e-value: 6.17728E-93
score: 272.86
IPR0012282-C-methyl-D-erythritol 4-phosphate cytidylyltransferaseTIGRFAMTIGR00453TIGR00453coord: 83..301
e-value: 1.0E-66
score: 222.4
IPR0012282-C-methyl-D-erythritol 4-phosphate cytidylyltransferaseHAMAPMF_00108IspDcoord: 81..301
score: 40.750599
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain Acoord: 74..303
e-value: 2.5E-82
score: 277.9
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 82..301
IPR0182944-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved sitePROSITEPS01295ISPDcoord: 178..185

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G007540.1CmaCh16G007540.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0008299 isoprenoid biosynthetic process
molecular_function GO:0050518 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0070567 cytidylyltransferase activity