CmaCh16G006860 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCTGGAAATAGTGGGAGTATGCAGTCGTCTAGTGGCGGCGATGAGGAGTTTGAGTCACCCGCCGACTCAATCACCGCCGTCTTTTTAACTAATCCACCAACTCATGGTGGTTCTTTCACCGGAAACTTCCATCCAACCAACCCTCTTCCTCAATCCTCCTCCTCCTCCTCCGCCGCCGCGGCCATGTTTGATCCTTTGTCTAATTTATTTGATCCAAGATCTTCGCTTTCTAACCAAAACCCACTTCTCAATTTCGATATGGTTTGGTCTCGGTCTCTGAGATCCGATCAAATTCCGCCGGATCTCGACGCCGCAAATCTTAATTCCGCCGCCGCCGATCAGAGTTTATCATCTATCTCCAATTTCTCCGGCGTACACAATTTTTCTCACCCATCTGATGGTATTAATTCCTTCCGAGCTTCGGATCAGACAGAATTGCAAGATATTCCTAATAATTGTGGCCGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCGAACGTAGTTAGGAGCTCGAAGAAGCGGCCGAGGGCGTCACGACGAGCTCCGACAACGGTGTTAACAACAGACACTACTAATTTCCGTGCCATGGTTCAAGAATTCACTGGAATTCCAGCTCCACCCTTCACCGCTTCCTCGTCGTCTCCTTTTACAAGAAACGCTGCGAGATTCGATTTGTTCGGCGGCTGTGGCGATGGCGGAGGCGGAGGTGGTGGTGGTAGATCATCAACAAATTTGGACGTTGTACCATCTACACAACAGAATTACCTTTTGCGACCATTTCCTCAAAAACCGCCGTATCTCTCTCCGCCGTCATCGACTTTCCTCGCCGGCGGCAACTTACAAAGTCCAATTTTTGACATCCAAAACATGTTTCAATCCAACCCCAAATTGATCCCTTCATCCAACGATCAAAATCTCAAAATGGGTATTTTCGAGGAGTTCGGTTTAAGCAGCCACAGCCACGGCCTCCTCCCGACCGGCCAAACCGTAAGAGGCGACAACAACAACCACCCTCCACCGACGAGCTGGGTTATCGGCGGCAGCGGTGGAGACCCAAATCAACAAGGTGTTAATCTCAGATCTAGCAATGGAAATCTCAACGGGAAATTAATCAGGTACGCCGCCGCCGGCACTGCAAATTCACCGGGATTTCACGGCGATAAAGCTGCTGAGAATTTAAGAGCTAGAACTGAAGGTATGGTGGAACCATGGATATGTTCATCTGATTAG ATGGAGTCTGGAAATAGTGGGAGTATGCAGTCGTCTAGTGGCGGCGATGAGGAGTTTGAGTCACCCGCCGACTCAATCACCGCCGTCTTTTTAACTAATCCACCAACTCATGGTGGTTCTTTCACCGGAAACTTCCATCCAACCAACCCTCTTCCTCAATCCTCCTCCTCCTCCTCCGCCGCCGCGGCCATGTTTGATCCTTTGTCTAATTTATTTGATCCAAGATCTTCGCTTTCTAACCAAAACCCACTTCTCAATTTCGATATGGTTTGGTCTCGGTCTCTGAGATCCGATCAAATTCCGCCGGATCTCGACGCCGCAAATCTTAATTCCGCCGCCGCCGATCAGAGTTTATCATCTATCTCCAATTTCTCCGGCGTACACAATTTTTCTCACCCATCTGATGGTATTAATTCCTTCCGAGCTTCGGATCAGACAGAATTGCAAGATATTCCTAATAATTGTGGCCGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCGAACGTAGTTAGGAGCTCGAAGAAGCGGCCGAGGGCGTCACGACGAGCTCCGACAACGGTGTTAACAACAGACACTACTAATTTCCGTGCCATGGTTCAAGAATTCACTGGAATTCCAGCTCCACCCTTCACCGCTTCCTCGTCGTCTCCTTTTACAAGAAACGCTGCGAGATTCGATTTGTTCGGCGGCTGTGGCGATGGCGGAGGCGGAGGTGGTGGTGGTAGATCATCAACAAATTTGGACGTTGTACCATCTACACAACAGAATTACCTTTTGCGACCATTTCCTCAAAAACCGCCGTATCTCTCTCCGCCGTCATCGACTTTCCTCGCCGGCGGCAACTTACAAAGTCCAATTTTTGACATCCAAAACATGTTTCAATCCAACCCCAAATTGATCCCTTCATCCAACGATCAAAATCTCAAAATGGGTATTTTCGAGGAGTTCGGTTTAAGCAGCCACAGCCACGGCCTCCTCCCGACCGGCCAAACCGTAAGAGGCGACAACAACAACCACCCTCCACCGACGAGCTGGGTTATCGGCGGCAGCGGTGGAGACCCAAATCAACAAGGTGTTAATCTCAGATCTAGCAATGGAAATCTCAACGGGAAATTAATCAGGTACGCCGCCGCCGGCACTGCAAATTCACCGGGATTTCACGGCGATAAAGCTGCTGAGAATTTAAGAGCTAGAACTGAAGGTATGGTGGAACCATGGATATGTTCATCTGATTAG ATGGAGTCTGGAAATAGTGGGAGTATGCAGTCGTCTAGTGGCGGCGATGAGGAGTTTGAGTCACCCGCCGACTCAATCACCGCCGTCTTTTTAACTAATCCACCAACTCATGGTGGTTCTTTCACCGGAAACTTCCATCCAACCAACCCTCTTCCTCAATCCTCCTCCTCCTCCTCCGCCGCCGCGGCCATGTTTGATCCTTTGTCTAATTTATTTGATCCAAGATCTTCGCTTTCTAACCAAAACCCACTTCTCAATTTCGATATGGTTTGGTCTCGGTCTCTGAGATCCGATCAAATTCCGCCGGATCTCGACGCCGCAAATCTTAATTCCGCCGCCGCCGATCAGAGTTTATCATCTATCTCCAATTTCTCCGGCGTACACAATTTTTCTCACCCATCTGATGGTATTAATTCCTTCCGAGCTTCGGATCAGACAGAATTGCAAGATATTCCTAATAATTGTGGCCGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCGAACGTAGTTAGGAGCTCGAAGAAGCGGCCGAGGGCGTCACGACGAGCTCCGACAACGGTGTTAACAACAGACACTACTAATTTCCGTGCCATGGTTCAAGAATTCACTGGAATTCCAGCTCCACCCTTCACCGCTTCCTCGTCGTCTCCTTTTACAAGAAACGCTGCGAGATTCGATTTGTTCGGCGGCTGTGGCGATGGCGGAGGCGGAGGTGGTGGTGGTAGATCATCAACAAATTTGGACGTTGTACCATCTACACAACAGAATTACCTTTTGCGACCATTTCCTCAAAAACCGCCGTATCTCTCTCCGCCGTCATCGACTTTCCTCGCCGGCGGCAACTTACAAAGTCCAATTTTTGACATCCAAAACATGTTTCAATCCAACCCCAAATTGATCCCTTCATCCAACGATCAAAATCTCAAAATGGGTATTTTCGAGGAGTTCGGTTTAAGCAGCCACAGCCACGGCCTCCTCCCGACCGGCCAAACCGTAAGAGGCGACAACAACAACCACCCTCCACCGACGAGCTGGGTTATCGGCGGCAGCGGTGGAGACCCAAATCAACAAGGTGTTAATCTCAGATCTAGCAATGGAAATCTCAACGGGAAATTAATCAGGTACGCCGCCGCCGGCACTGCAAATTCACCGGGATTTCACGGCGATAAAGCTGCTGAGAATTTAAGAGCTAGAACTGAAGGTATGGTGGAACCATGGATATGTTCATCTGATTAG MESGNSGSMQSSSGGDEEFESPADSITAVFLTNPPTHGGSFTGNFHPTNPLPQSSSSSSAAAAMFDPLSNLFDPRSSLSNQNPLLNFDMVWSRSLRSDQIPPDLDAANLNSAAADQSLSSISNFSGVHNFSHPSDGINSFRASDQTELQDIPNNCGRGGGGGGGGGGGGANVVRSSKKRPRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFTASSSSPFTRNAARFDLFGGCGDGGGGGGGGRSSTNLDVVPSTQQNYLLRPFPQKPPYLSPPSSTFLAGGNLQSPIFDIQNMFQSNPKLIPSSNDQNLKMGIFEEFGLSSHSHGLLPTGQTVRGDNNNHPPPTSWVIGGSGGDPNQQGVNLRSSNGNLNGKLIRYAAAGTANSPGFHGDKAAENLRARTEGMVEPWICSSD Homology
BLAST of CmaCh16G006860 vs. ExPASy Swiss-Prot
Match: Q9LIE6 (VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 6.5e-06 Identity = 24/39 (61.54%), Postives = 33/39 (84.62%), Query Frame = 0
BLAST of CmaCh16G006860 vs. TAIR 10
Match: AT5G65170.1 (VQ motif-containing protein ) HSP 1 Score: 100.9 bits (250), Expect = 2.5e-21 Identity = 147/439 (33.49%), Postives = 193/439 (43.96%), Query Frame = 0
BLAST of CmaCh16G006860 vs. TAIR 10
Match: AT4G39720.1 (VQ motif-containing protein ) HSP 1 Score: 92.0 bits (227), Expect = 1.2e-18 Identity = 116/373 (31.10%), Postives = 148/373 (39.68%), Query Frame = 0
BLAST of CmaCh16G006860 vs. TAIR 10
Match: AT1G35830.1 (VQ motif-containing protein ) HSP 1 Score: 77.8 bits (190), Expect = 2.3e-14 Identity = 78/253 (30.83%), Postives = 112/253 (44.27%), Query Frame = 0
BLAST of CmaCh16G006860 vs. TAIR 10
Match: AT4G15120.1 (VQ motif-containing protein ) HSP 1 Score: 55.5 bits (132), Expect = 1.2e-07 Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0
BLAST of CmaCh16G006860 vs. TAIR 10
Match: AT3G22160.1 (VQ motif-containing protein ) HSP 1 Score: 53.5 bits (127), Expect = 4.6e-07 Identity = 24/39 (61.54%), Postives = 33/39 (84.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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