CmaCh16G006830 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G006830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	FLZ-type domain-containing protein
Location	Cma_Chr16: 3557660 .. 3559195 (-)
RNA-Seq Expression	CmaCh16G006830
Synteny	CmaCh16G006830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATACTAAGGAAGCGTCCACGGCCGCAGATGAAAAGAACGGCGAGTATATCAGGAATCACGGTGGATCTCAGCCACGTGGAGGGCGAACAGCCATCCAATCTTCACAATCCCGCCACCGGAGATATTCCTCCGGTGATCGCCACCCAAAGTCCGGAGACTGATCAATTGAATTACACCTTGTCTTTCGTGTCACCGAGAGGCCGGAGAAATCTCTCCGCCTTTAACAAACACTCCGATGACCATTCTTCTCTCCACTTTCTTCGCACTTGCACCTTCTGTCACCGCCGTCTCTCCCCCGCCCGTGACATTTACATGTACATGTATGAATCTCTAATTTTATCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTAAATTTCAATACTTTCCCCAAAAAAAATTAATGGGTTTTGTTAATAATAACTCATCAATTCAAGCTTTATTTTTATTTTATTTTATTGGTTTAAATTATTGTTTAAAATTGAGTTTTGTGTGTAGGGGAGATACAGCTTTTTGCAGTGCTGAGTGCAGAGAGAAGAAGATGGAACAAGATTTCACAAAAGAAAAGGGCACCACCACCGGCCACGGCGGCGGTGGCGGCCGGCATAAAGAAAGGTCAGATTGTGGCAGCGGATTTTAAATGGGTTTCCAACTATTATATTTGTTTGTACGATTATGAACCAAAAATTGACATGCACGTCTTTCTTTAAAAATATATGCATTTTTATTTTTCGA

mRNA sequence

ATGATACTAAGGAAGCGTCCACGGCCGCAGATGAAAAGAACGGCGAGTATATCAGGAATCACGGTGGATCTCAGCCACGTGGAGGGCGAACAGCCATCCAATCTTCACAATCCCGCCACCGGAGATATTCCTCCGGTGATCGCCACCCAAAGTCCGGAGACTGATCAATTGAATTACACCTTGTCTTTCGTGTCACCGAGAGGCCGGAGAAATCTCTCCGCCTTTAACAAACACTCCGATGACCATTCTTCTCTCCACTTTCTTCGCACTTGCACCTTCTGTCACCGCCGTCTCTCCCCCGCCCGTGACATTTACATGTACATGGGAGATACAGCTTTTTGCAGTGCTGAGTGCAGAGAGAAGAAGATGGAACAAGATTTCACAAAAGAAAAGGGCACCACCACCGGCCACGGCGGCGGTGGCGGCCGGCATAAAGAAAGGTCAGATTGTGGCAGCGGATTTTAAATGGGTTTCCAACTATTATATTTGTTTGTACGATTATGAACCAAAAATTGACATGCACGTCTTTCTTTAAAAATATATGCATTTTTATTTTTCGA

Coding sequence (CDS)

ATGATACTAAGGAAGCGTCCACGGCCGCAGATGAAAAGAACGGCGAGTATATCAGGAATCACGGTGGATCTCAGCCACGTGGAGGGCGAACAGCCATCCAATCTTCACAATCCCGCCACCGGAGATATTCCTCCGGTGATCGCCACCCAAAGTCCGGAGACTGATCAATTGAATTACACCTTGTCTTTCGTGTCACCGAGAGGCCGGAGAAATCTCTCCGCCTTTAACAAACACTCCGATGACCATTCTTCTCTCCACTTTCTTCGCACTTGCACCTTCTGTCACCGCCGTCTCTCCCCCGCCCGTGACATTTACATGTACATGGGAGATACAGCTTTTTGCAGTGCTGAGTGCAGAGAGAAGAAGATGGAACAAGATTTCACAAAAGAAAAGGGCACCACCACCGGCCACGGCGGCGGTGGCGGCCGGCATAAAGAAAGGTCAGATTGTGGCAGCGGATTTTAA

Protein sequence

MILRKRPRPQMKRTASISGITVDLSHVEGEQPSNLHNPATGDIPPVIATQSPETDQLNYTLSFVSPRGRRNLSAFNKHSDDHSSLHFLRTCTFCHRRLSPARDIYMYMGDTAFCSAECREKKMEQDFTKEKGTTTGHGGGGGRHKERSDCGSGF

Homology

[Close]

BLAST of CmaCh16G006830 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.0e-20
Identity = 60/141 (42.55%), Postives = 74/141 (52.48%), Query Frame = 0


Query: 1   MILRKRPRPQMKRTASISGITVDLSHVEGEQPSNLHNPATGD--------IPPVIATQSP 60
           M+L KR RP + RT S+S I  DL+     +PSN   P            +   +     
Sbjct: 1   MLLGKRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPTVASPYGSNGQAVTAAVDQNRG 60

Query: 61  ETDQLNYTLSFVSPRGRRNLSAFNKHSDDHSSL-HFLRTCTFCHRRLSPARDIYMYMGDT 120
             DQ    LS V+PRG        +HS D S   HFLR+C  C R L P RDIYMY GD 
Sbjct: 61  FLDQ--RLLSMVTPRGN-----LRRHSGDFSDAGHFLRSCALCERLLVPGRDIYMYRGDK 120

Query: 121 AFCSAECREKKMEQDFTKEKG 133
           AFCS+ECR+++M QD  KEKG
Sbjct: 121 AFCSSECRQEQMAQDERKEKG 134

[Close]

BLAST of CmaCh16G006830 vs. ExPASy Swiss-Prot
Match: F4JW68 (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.2e-17
Identity = 56/132 (42.42%), Postives = 73/132 (55.30%), Query Frame = 0


Query: 1   MILRKRPRPQMKRTASISGITVDLSHVEGEQPSNLHNPATGDIPPVIATQSPETDQLNYT 60
           M+L  RPRPQM+RTASI+ IT++   V+G+Q +        D+   +          NY 
Sbjct: 1   MLLGNRPRPQMQRTASITRITIE---VDGDQTAG----QDSDVSMTVVDGGE-----NYA 60

Query: 61  LSFVSP-RGRRNLSAFNKHSDDHSSLHFLRTCTFCHRRLSPARDIYMYMGDTAFCSAECR 120
             F+SP   +RN   +   S   S   FL  C FC R L+P RDIYMY GD AFCS ECR
Sbjct: 61  QRFLSPVNHQRNERKYGGRSSPSS---FLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECR 117

Query: 121 EKKMEQDFTKEK 132
           E++ME D  K +
Sbjct: 121 EQQMEHDEGKTR 117

[Close]

BLAST of CmaCh16G006830 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.9e-17
Identity = 60/149 (40.27%), Postives = 79/149 (53.02%), Query Frame = 0


Query: 1   MILRKRPRPQMKRTASISGITVDLSHVEGEQPSNLHNPATGDIPPVIATQSPETDQLNYT 60
           M+L KR RP +KRT S+S I  DL+    ++PS+ H     ++           DQ    
Sbjct: 1   MLLGKRQRPPIKRTTSLSEIKFDLNQPSEQEPSD-HQIQLVNVDEHRQVHQRLLDQ--RL 60

Query: 61  LSFVSPRGRRNLSAFNKHSDDHSSLHFLRTCTFCHRRLSPARDIYMYMGDTAFCSAECRE 120
           L+ VSPRG +      +HS D+S   FLR+C+ C R L   RDIYMY GD AFCS ECR+
Sbjct: 61  LAMVSPRGTQ-----RRHSSDYSE-DFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQ 120

Query: 121 KKMEQDFTKEK-------------GTTTG 137
           +++  D  KEK             GTTTG
Sbjct: 121 QQITVDERKEKKKGSVRSTIVVATGTTTG 140

[Close]

BLAST of CmaCh16G006830 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.3e-09
Identity = 45/131 (34.35%), Postives = 61/131 (46.56%), Query Frame = 0


Query: 1   MILRKRPRPQMKRTASISGITVDLSHVEGEQPSNLHNPATGDIPPVIATQSPETDQLNYT 60
           M+L KR    +KRT S+  IT+D                     P I   S  +D L + 
Sbjct: 1   MVLGKRHGSLIKRTTSMKMITLD--------------------TPTIYDASQPSDHLTFH 60

Query: 61  LSFVSPRGRRNLSAFNKHSDDHSSLHFLRTCTFCHRRLSPARDIYMYMGDTAFCSAECRE 120
               +P     +     + DD     FL+TC+ C+R L   RDIYMY G+ AFCS ECRE
Sbjct: 61  QHPHNP-----MVVMASNYDD-----FLKTCSLCNRSLCHHRDIYMYRGNNAFCSLECRE 101

Query: 121 KKMEQDFTKEK 132
           K+++ D  K K
Sbjct: 121 KQIKLDEKKAK 101

[Close]

BLAST of CmaCh16G006830 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 41/124 (33.06%), Postives = 62/124 (50.00%), Query Frame = 0


Query: 30  EQPSNLHNPATGDIPPVIATQSPETDQLNYTLSFVSPR-GRRNLSAFNKHSDDHSSLHFL 89
           E  + + +P+  + P     QS   +  ++  S  SPR G+ +   F+     +   HFL
Sbjct: 23  EMEAGVSSPSCYNYP-----QSYYYNHHHHQYSVSSPRSGKFHDFRFDNSYYGYGQPHFL 82

Query: 90  RTCTFCHRRLSPARDIYMYMGDTAFCSAECREKKMEQDFTKEKGTTTGHGGGGGRHKERS 149
            +C  C +RL   RDI+MY GDT FCS ECRE+++E+D  KEK  +        R  E+ 
Sbjct: 83  DSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQIERDEAKEKKQSLSTSVKAMRRNEKR 141

Query: 150 DCGS 153
              S
Sbjct: 143 SSSS 141

[Close]

BLAST of CmaCh16G006830 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 99.0 bits (245), Expect = 3.6e-21
Identity = 60/141 (42.55%), Postives = 74/141 (52.48%), Query Frame = 0


Query: 1   MILRKRPRPQMKRTASISGITVDLSHVEGEQPSNLHNPATGD--------IPPVIATQSP 60
           M+L KR RP + RT S+S I  DL+     +PSN   P            +   +     
Sbjct: 1   MLLGKRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPTVASPYGSNGQAVTAAVDQNRG 60

Query: 61  ETDQLNYTLSFVSPRGRRNLSAFNKHSDDHSSL-HFLRTCTFCHRRLSPARDIYMYMGDT 120
             DQ    LS V+PRG        +HS D S   HFLR+C  C R L P RDIYMY GD 
Sbjct: 61  FLDQ--RLLSMVTPRGN-----LRRHSGDFSDAGHFLRSCALCERLLVPGRDIYMYRGDK 120

Query: 121 AFCSAECREKKMEQDFTKEKG 133
           AFCS+ECR+++M QD  KEKG
Sbjct: 121 AFCSSECRQEQMAQDERKEKG 134

[Close]

BLAST of CmaCh16G006830 vs. TAIR 10
Match: AT4G39795.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 89.0 bits (219), Expect = 3.7e-18
Identity = 56/132 (42.42%), Postives = 73/132 (55.30%), Query Frame = 0


Query: 1   MILRKRPRPQMKRTASISGITVDLSHVEGEQPSNLHNPATGDIPPVIATQSPETDQLNYT 60
           M+L  RPRPQM+RTASI+ IT++   V+G+Q +        D+   +          NY 
Sbjct: 1   MLLGNRPRPQMQRTASITRITIE---VDGDQTAG----QDSDVSMTVVDGGE-----NYA 60

Query: 61  LSFVSP-RGRRNLSAFNKHSDDHSSLHFLRTCTFCHRRLSPARDIYMYMGDTAFCSAECR 120
             F+SP   +RN   +   S   S   FL  C FC R L+P RDIYMY GD AFCS ECR
Sbjct: 61  QRFLSPVNHQRNERKYGGRSSPSS---FLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECR 117

Query: 121 EKKMEQDFTKEK 132
           E++ME D  K +
Sbjct: 121 EQQMEHDEGKTR 117

[Close]

BLAST of CmaCh16G006830 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 88.2 bits (217), Expect = 6.3e-18
Identity = 60/149 (40.27%), Postives = 79/149 (53.02%), Query Frame = 0


Query: 1   MILRKRPRPQMKRTASISGITVDLSHVEGEQPSNLHNPATGDIPPVIATQSPETDQLNYT 60
           M+L KR RP +KRT S+S I  DL+    ++PS+ H     ++           DQ    
Sbjct: 1   MLLGKRQRPPIKRTTSLSEIKFDLNQPSEQEPSD-HQIQLVNVDEHRQVHQRLLDQ--RL 60

Query: 61  LSFVSPRGRRNLSAFNKHSDDHSSLHFLRTCTFCHRRLSPARDIYMYMGDTAFCSAECRE 120
           L+ VSPRG +      +HS D+S   FLR+C+ C R L   RDIYMY GD AFCS ECR+
Sbjct: 61  LAMVSPRGTQ-----RRHSSDYSE-DFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQ 120

Query: 121 KKMEQDFTKEK-------------GTTTG 137
           +++  D  KEK             GTTTG
Sbjct: 121 QQITVDERKEKKKGSVRSTIVVATGTTTG 140

[Close]

BLAST of CmaCh16G006830 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10
Identity = 45/131 (34.35%), Postives = 61/131 (46.56%), Query Frame = 0


Query: 1   MILRKRPRPQMKRTASISGITVDLSHVEGEQPSNLHNPATGDIPPVIATQSPETDQLNYT 60
           M+L KR    +KRT S+  IT+D                     P I   S  +D L + 
Sbjct: 1   MVLGKRHGSLIKRTTSMKMITLD--------------------TPTIYDASQPSDHLTFH 60

Query: 61  LSFVSPRGRRNLSAFNKHSDDHSSLHFLRTCTFCHRRLSPARDIYMYMGDTAFCSAECRE 120
               +P     +     + DD     FL+TC+ C+R L   RDIYMY G+ AFCS ECRE
Sbjct: 61  QHPHNP-----MVVMASNYDD-----FLKTCSLCNRSLCHHRDIYMYRGNNAFCSLECRE 101

Query: 121 KKMEQDFTKEK 132
           K+++ D  K K
Sbjct: 121 KQIKLDEKKAK 101

[Close]

BLAST of CmaCh16G006830 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 41/124 (33.06%), Postives = 62/124 (50.00%), Query Frame = 0


Query: 30  EQPSNLHNPATGDIPPVIATQSPETDQLNYTLSFVSPR-GRRNLSAFNKHSDDHSSLHFL 89
           E  + + +P+  + P     QS   +  ++  S  SPR G+ +   F+     +   HFL
Sbjct: 23  EMEAGVSSPSCYNYP-----QSYYYNHHHHQYSVSSPRSGKFHDFRFDNSYYGYGQPHFL 82

Query: 90  RTCTFCHRRLSPARDIYMYMGDTAFCSAECREKKMEQDFTKEKGTTTGHGGGGGRHKERS 149
            +C  C +RL   RDI+MY GDT FCS ECRE+++E+D  KEK  +        R  E+ 
Sbjct: 83  DSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQIERDEAKEKKQSLSTSVKAMRRNEKR 141

Query: 150 DCGS 153
              S
Sbjct: 143 SSSS 141

The following BLAST results are available for this feature:

BLAST of CmaCh16G006830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGZ8	5.0e-20	42.55	FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1	[more]
F4JW68	5.2e-17	42.42	FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1	[more]
Q8VY80	8.9e-17	40.27	FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1	[more]
Q9LV75	2.3e-09	34.35	Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702...	[more]
Q8VZM9	1.5e-08	33.06	FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1	[more]

BLAST of CmaCh16G006830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78020.1	3.6e-21	42.55	Protein of unknown function (DUF581)	[more]
AT4G39795.1	3.7e-18	42.42	Protein of unknown function (DUF581)	[more]
AT1G22160.1	6.3e-18	40.27	Protein of unknown function (DUF581)	[more]
AT5G65040.1	1.7e-10	34.35	Protein of unknown function (DUF581)	[more]
AT4G17670.1	1.1e-09	33.06	Protein of unknown function (DUF581)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007650	Zf-FLZ domain	PFAM	PF04570	zf-FLZ	coord: 79..126 e-value: 8.2E-22 score: 76.4
IPR007650	Zf-FLZ domain	PROSITE	PS51795	ZF_FLZ	coord: 86..130 score: 21.852146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..154
None	No IPR available	PANTHER	PTHR33059:SF76	PROTEIN INCREASED RESISTANCE TO MYZUS PERSICAE 1	coord: 1..133
None	No IPR available	PANTHER	PTHR33059	FCS-LIKE ZINC FINGER 5	coord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G006830.1	CmaCh16G006830.1	mRNA