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CmaCh16G006830 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATACTAAGGAAGCGTCCACGGCCGCAGATGAAAAGAACGGCGAGTATATCAGGAATCACGGTGGATCTCAGCCACGTGGAGGGCGAACAGCCATCCAATCTTCACAATCCCGCCACCGGAGATATTCCTCCGGTGATCGCCACCCAAAGTCCGGAGACTGATCAATTGAATTACACCTTGTCTTTCGTGTCACCGAGAGGCCGGAGAAATCTCTCCGCCTTTAACAAACACTCCGATGACCATTCTTCTCTCCACTTTCTTCGCACTTGCACCTTCTGTCACCGCCGTCTCTCCCCCGCCCGTGACATTTACATGTACATGTATGAATCTCTAATTTTATCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTAAATTTCAATACTTTCCCCAAAAAAAATTAATGGGTTTTGTTAATAATAACTCATCAATTCAAGCTTTATTTTTATTTTATTTTATTGGTTTAAATTATTGTTTAAAATTGAGTTTTGTGTGTAGGGGAGATACAGCTTTTTGCAGTGCTGAGTGCAGAGAGAAGAAGATGGAACAAGATTTCACAAAAGAAAAGGGCACCACCACCGGCCACGGCGGCGGTGGCGGCCGGCATAAAGAAAGGTCAGATTGTGGCAGCGGATTTTAAATGGGTTTCCAACTATTATATTTGTTTGTACGATTATGAACCAAAAATTGACATGCACGTCTTTCTTTAAAAATATATGCATTTTTATTTTTCGA ATGATACTAAGGAAGCGTCCACGGCCGCAGATGAAAAGAACGGCGAGTATATCAGGAATCACGGTGGATCTCAGCCACGTGGAGGGCGAACAGCCATCCAATCTTCACAATCCCGCCACCGGAGATATTCCTCCGGTGATCGCCACCCAAAGTCCGGAGACTGATCAATTGAATTACACCTTGTCTTTCGTGTCACCGAGAGGCCGGAGAAATCTCTCCGCCTTTAACAAACACTCCGATGACCATTCTTCTCTCCACTTTCTTCGCACTTGCACCTTCTGTCACCGCCGTCTCTCCCCCGCCCGTGACATTTACATGTACATGGGAGATACAGCTTTTTGCAGTGCTGAGTGCAGAGAGAAGAAGATGGAACAAGATTTCACAAAAGAAAAGGGCACCACCACCGGCCACGGCGGCGGTGGCGGCCGGCATAAAGAAAGGTCAGATTGTGGCAGCGGATTTTAAATGGGTTTCCAACTATTATATTTGTTTGTACGATTATGAACCAAAAATTGACATGCACGTCTTTCTTTAAAAATATATGCATTTTTATTTTTCGA ATGATACTAAGGAAGCGTCCACGGCCGCAGATGAAAAGAACGGCGAGTATATCAGGAATCACGGTGGATCTCAGCCACGTGGAGGGCGAACAGCCATCCAATCTTCACAATCCCGCCACCGGAGATATTCCTCCGGTGATCGCCACCCAAAGTCCGGAGACTGATCAATTGAATTACACCTTGTCTTTCGTGTCACCGAGAGGCCGGAGAAATCTCTCCGCCTTTAACAAACACTCCGATGACCATTCTTCTCTCCACTTTCTTCGCACTTGCACCTTCTGTCACCGCCGTCTCTCCCCCGCCCGTGACATTTACATGTACATGGGAGATACAGCTTTTTGCAGTGCTGAGTGCAGAGAGAAGAAGATGGAACAAGATTTCACAAAAGAAAAGGGCACCACCACCGGCCACGGCGGCGGTGGCGGCCGGCATAAAGAAAGGTCAGATTGTGGCAGCGGATTTTAA MILRKRPRPQMKRTASISGITVDLSHVEGEQPSNLHNPATGDIPPVIATQSPETDQLNYTLSFVSPRGRRNLSAFNKHSDDHSSLHFLRTCTFCHRRLSPARDIYMYMGDTAFCSAECREKKMEQDFTKEKGTTTGHGGGGGRHKERSDCGSGF Homology
BLAST of CmaCh16G006830 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.0e-20 Identity = 60/141 (42.55%), Postives = 74/141 (52.48%), Query Frame = 0
BLAST of CmaCh16G006830 vs. ExPASy Swiss-Prot
Match: F4JW68 (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.2e-17 Identity = 56/132 (42.42%), Postives = 73/132 (55.30%), Query Frame = 0
BLAST of CmaCh16G006830 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 8.9e-17 Identity = 60/149 (40.27%), Postives = 79/149 (53.02%), Query Frame = 0
BLAST of CmaCh16G006830 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.3e-09 Identity = 45/131 (34.35%), Postives = 61/131 (46.56%), Query Frame = 0
BLAST of CmaCh16G006830 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08 Identity = 41/124 (33.06%), Postives = 62/124 (50.00%), Query Frame = 0
BLAST of CmaCh16G006830 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 99.0 bits (245), Expect = 3.6e-21 Identity = 60/141 (42.55%), Postives = 74/141 (52.48%), Query Frame = 0
BLAST of CmaCh16G006830 vs. TAIR 10
Match: AT4G39795.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 89.0 bits (219), Expect = 3.7e-18 Identity = 56/132 (42.42%), Postives = 73/132 (55.30%), Query Frame = 0
BLAST of CmaCh16G006830 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 88.2 bits (217), Expect = 6.3e-18 Identity = 60/149 (40.27%), Postives = 79/149 (53.02%), Query Frame = 0
BLAST of CmaCh16G006830 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10 Identity = 45/131 (34.35%), Postives = 61/131 (46.56%), Query Frame = 0
BLAST of CmaCh16G006830 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09 Identity = 41/124 (33.06%), Postives = 62/124 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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