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CmaCh16G006670 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTCCCTCCTTGCTCCGAATTGATCCTCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTTGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGCAGCCGTAGAGGCATTGCATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCGAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTTGGTTCATTTCCAAGCATTCTACGCTTTTGACTATTAGTTTGGAGAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATTTCCTGCAAGTTATGCGGCGATGTTCTGATATGCTTAAGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATATTGTTTCTATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGAGGCCTAGAATTTTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGNCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTATTAGTTTGGAAAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTACAAGTTTTGCGGCGATGTTCTGATATGCTTATGCGATCTCCGTATACAAGGTTGCCTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATCTTGTTTCTATGGTTGTAGAGACGGGTTTTTCTACAAATACTAGAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGAGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAACTCGAAGAGGCTATCNCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTTGGTTCATTTCCAAGCATTCTACGCTTTTGACTATTAGTTTGGAGAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATTTCCTGCAAGTTATGCGGCGATGTTCTGATATGCTTAAGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATATTGTTTCTATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGAGGCCTAGAATTTTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAACTCGAAGAGGCTATCGAAGAAACACCTGCAATTGATCGATATATTGGGGATGTCTGATGAGAATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGACAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGGAGTTGGAAACATGA ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTCCCTCCTTGCTCCGAATTGATCCTCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTTGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGCAGCCGTAGAGGCATTGCATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCGAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTTGGTTCATTTCCAAGCATTCTACGCTTTTGACTATTAGTTTGGAGAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATTTCCTGCAAGTTATGCGGCGATGTTCTGATATGCTTAAGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATATTGTTTCTATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGAGGCCTAGAATTTTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGNCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGTTTGGAAAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTACAAGTTTTGCGGCGATGTTCTGATATGCTTATGCGATCTCCGTATACAAGGTTGCCTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATCTTGTTTCTATGGTTGTAGAGACGGGTTTTTCTACAAATACTAGAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGAGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTTGGTTCATTTCCAAGCATTCTACGCTTTTGACTATTAGTTTGGAGAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATTTCCTGCAAGTTATGCGGCGATGTTCTGATATGCTTAAGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATATTGTTTCTATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGAGGCCTAGAATTTTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAACTCGAAGAGGCTATCGAAGAAACACCTGCAATTGATCGATATATTGGGGATGTCTGATGAGAATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGACAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGGAGTTGGAAACATGA ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTCCCTCCTTGCTCCGAATTGATCCTCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTTGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGCAGCCGTAGAGGCATTGCATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCGAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTTGGTTCATTTCCAAGCATTCTACGCTTTTGACTATTAGTTTGGAGAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATTTCCTGCAAGTTATGCGGCGATGTTCTGATATGCTTAAGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATATTGTTTCTATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGAGGCCTAGAATTTTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGNCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGTTTGGAAAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTACAAGTTTTGCGGCGATGTTCTGATATGCTTATGCGATCTCCGTATACAAGGTTGCCTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATCTTGTTTCTATGGTTGTAGAGACGGGTTTTTCTACAAATACTAGAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGAGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTTGGTTCATTTCCAAGCATTCTACGCTTTTGACTATTAGTTTGGAGAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATTTCCTGCAAGTTATGCGGCGATGTTCTGATATGCTTAAGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATATTGTTTCTATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGAGGCCTAGAATTTTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAACTCGAAGAGGCTATCGAAGAAACACCTGCAATTGATCGATATATTGGGGATGTCTGATGAGAATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGACAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGGAGTTGGAAACATGA MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNLGLVGSDLGWFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDFLQVMRRCSDMLKRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRRKDSEAEDRVLPESWLGRLRFGLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLMRSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRMFVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVTLKPKIEFFQNLGLVGSDLGWFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDFLQVMRRCSDMLKRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDKFVHRFPDHVTELLAAFRGQCMDELQPKELET Homology
BLAST of CmaCh16G006670 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.3e-07 Identity = 43/161 (26.71%), Postives = 80/161 (49.69%), Query Frame = 0
BLAST of CmaCh16G006670 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 4.4e-06 Identity = 51/210 (24.29%), Postives = 92/210 (43.81%), Query Frame = 0
BLAST of CmaCh16G006670 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2) HSP 1 Score: 50.8 bits (120), Expect = 8.3e-05 Identity = 41/147 (27.89%), Postives = 72/147 (48.98%), Query Frame = 0
BLAST of CmaCh16G006670 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 4.1e-04 Identity = 37/151 (24.50%), Postives = 67/151 (44.37%), Query Frame = 0
BLAST of CmaCh16G006670 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein ) HSP 1 Score: 214.9 bits (546), Expect = 2.4e-55 Identity = 124/311 (39.87%), Postives = 192/311 (61.74%), Query Frame = 0
BLAST of CmaCh16G006670 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein ) HSP 1 Score: 118.2 bits (295), Expect = 3.0e-26 Identity = 77/268 (28.73%), Postives = 133/268 (49.63%), Query Frame = 0
BLAST of CmaCh16G006670 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein ) HSP 1 Score: 117.9 bits (294), Expect = 3.9e-26 Identity = 84/299 (28.09%), Postives = 140/299 (46.82%), Query Frame = 0
BLAST of CmaCh16G006670 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein ) HSP 1 Score: 90.5 bits (223), Expect = 6.7e-18 Identity = 85/360 (23.61%), Postives = 154/360 (42.78%), Query Frame = 0
BLAST of CmaCh16G006670 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein ) HSP 1 Score: 90.5 bits (223), Expect = 6.7e-18 Identity = 85/360 (23.61%), Postives = 154/360 (42.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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