CmaCh16G006660 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G006660
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionnuclear transcription factor Y subunit B-like
LocationCma_Chr16: 3471267 .. 3476010 (-)
RNA-Seq ExpressionCmaCh16G006660
SyntenyCmaCh16G006660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACAAGCGAAACCTCACAACCACCGTCAGCCCCGTCGGCAGCCCAACCTCCGACAACATATCCGACAGCTCCACTAAAGAACAGGACAGGTTTCTTCCGATCGCAAACGTGAGCCGAATCATGAAAAAATCCCTTCCTGCTAACGCCAAAATCTCAAAAGAAGCTAAAGAGACCGTCCAGGAATGCGTGTCGGAGTTCATCAGCTTCATCACTGGCGAGGCCTCCGATAAGTGTCAAAGGGAAAAACGGAAGACGATCAACGGCGACGATTTGCTGTGGGCTATGACCACTTTGGGATTCGAAAATTACGTTGGCCCTTTGAAGATTTATCTCAACAAATACAGAGAAACAGAGGAGGAGAAACATTCTTTAGCCAGACAGGACGATCCCTCCCCGTCACCGACGAAATCCGCCGCCGCCACCGTCGAACAGATTATCCGTGGGAAATCGGCCAATCCGGTGATGGATTTTCAGAATTTAAATTCTGGGTTTTATTCACTGGGGAATCATAAGAGTTTGAATATAATCGATGGCGTTGGATTTGGGGAAAGTTTGAGGGGTAAATATGAGTGGAGTCCGTGAAAATGGAGCTCCAGCTATGGCGGCTCACATGAACATCAGCTAAAAAAGAAAGTAAATTAGGGAATTAATCCAATTTCTGATTGCAATTAAGGAGAATTTATCATAGTCTAAAACATATTACAAATTTATGGTAGGAGAATTTATCAGAGAGAAATATTATAATTTTAGGGGTTTTTTCTTTTCTTTTCTTTTCTTTTTTTCTTGGTTATAAAAGTGATGGGAATCTAGAATTAATACTTTAATATATTATGCTTTTTGACTTAATGATAAAATCACATTTAAATTCTTGGTCTCCAGGTACTTGAGAGTGCTTTTTATTTTAATTTTCTTGTTATGATTGATGGGGAATATCGTGTTTGACCACTTTCTCATTATGAAAATATTCTCTAATCTCATCTTTTTCATAATTATTATTTAACTAATTAAAGGTTCTTACTTCCTTTTAAGGGTGTTTATAGACCCGATATCTTAAACAACTCAAGCTATCCAACCCAAACTATAAAGATTACGATGAATGAGACTTTTGAAAAATCGAAAATTCAGTTCAATCCGAAATTTTAAAAAGATTAAGAAATTTAATATTTGTAACCAATATATATGGTGTGATGAGCCGACATTTGATATTTAAACTTTATAAAATTTTAATTATTATAAAATATATAGTAGATAAATAGATTAAAAAAAAAAAAAAAACCTAACTTGAAAACAAGGGTTTTGTTGAATTGAGATAGGATACTCAAAATTTAAGAGCAGTCTAAAAGATGTTTCCAACCCGAACCATATAGATCATTGCTCCATTTACTTTGGTAAGAAAACCTTTTATAATGTCATTAATCACCCTGGGTTTGACTTGGTGTATTTTAAGCCAAAACAAACAGTCATTACAGGAAGGAAGCTGAATTGGCTACAAGATTATAATTACCACACAAGAATCACTATTTTATAACCCTTTAATGGTGTGAATAATGGAGAGTTTATCTATATGTTCGAATGGCCAAAAACAGTTAAATTAGCAATGAAGTTACTTTCCGTTCTAATTACCGAGTCCTACGATGAACAATAGCAATGAAGTTCATCTACTCAATAGATTATCAGAAGAATGAACTGTTTGGCAAATGGAAATAATATATATATATATATCCTTCAAAAACTGTCAAACGTGTATTGGCATTTGCCAATGGCAGTGAACATCAACAGAATTTGTTCCCGGAGGGGGAGGAACTCAAACTATGGTTACACAAAAAATGATGTGATGGAATAATTAACAAAATTACACCAAGATATTCCTACTAGAAGTGAGGTTCTAAGCCCTTCTGTTTGCTAATGGAAAGAAGAAATGTAGAAAAAGAGAGAAAAGGAATGGAGAATGAAAGCATGATCCTAAATAGTACAACAGTCAGTCTATATCTAAAGATTTTGGTGGCTACTACTACTGTTCTAGGTCCTGTTAGATCAATGAAATAAGTCGAAACGCCATCCGAGTCATCAGTTTGGCATATAAGAAGAAAGAGTACCTTCAAATATTGGGCAAAATCTGGACCCGAAAGGAGCTTTGTATCGATTTTCTATCTCGTGCCAGATATGGTATCAGATCACAGGACTTCATGAGCCTTTCCATAATACCTATTTATAAATGGAGCCTGGAAAGCCCAGAAAACAAAATATTGGAGGACATTGGAGAAAATGCAGGCAAAATCATGTGAGAAAAAATTACTGGTTACGGTTTTTAAATCTTAAACGTTTATAGATTTCTGGTCCTTCAAAATCCTTTTAAGATCGATATATTTATGTATATTAATATTTTTGAGTGTTCGGGTAACCTAGCTGCAAAACAACTACATATGAAAACTCCCAAGTAGGTGATCGTCATGGCTTTAAGTCTTTCACTTTGAGTCATTAATTATTTGCATAGACACTATAGACCACTAGGCCAATCCATGCTTGATTGTAAATGTGTAATAAGCTCAAATGAGCAGGTGGCCAAGTACTAGGATAACTAGTTAAGAGGTACCAAATTCATAGCTATAGCCTATTTTATTCTTTAGATTTAGAATTCTAACCAAGGAGAAGACGAAGACAAGAGTGGAAGAAGGGTGAGTCGCGAAGGAGCAAAGCAAAAAGTGGTTTTGAACTTCCAACTCTTCCCGTCTCAAAAAATTTATAGCTGTGAGAGTCAACCCTATGCAAAAGAGTGGTGGAACCCCCTTTCTTTAATAAGTAGGAAGTTTTCGTAAACATGTTAAAGGGCTCCCGTCTTTGACGGGTCACCTTTCCAAGACTGAAAAAGGAGAACATCTCGGCAAGGGAAAGGACTGGTTCAATCAAGCTACTGAGTATTGGAAACAAGATGCATGAGCTAGGGAGAGTATTTAGAGAATGTCAGCTGAAAAGGAGTAGGCTTTTGGTCCTCTTCCATCAGTTTGGCTTGGGAAGAGATGGGAAGCTCTCTAATCTTCCTATAGGCCATATAGTTCGTAGTTCGTACCCGTTGTTGATAAATAAAAACGATGTTTATCAAAAAAATACAGATCAAGGTCAAACATTTTTCGCTCGTCATCGGCCAAGAGGATTAAACCAGAGTTAACATACCTTAACGTTGGATATATCAGGCGTATCAGGTGTTTGTACAGGGTAAAACTTATAAAATTTCATCTTCTCAAACGCTTCCTTAGTTTCTTTGCTCATTTCCTCAATGGCTTTTTTCCGTGCTTCCCTAGCCTGAAAGAACATCGAATAAGATCTGTTCGCAATGGTTACTTTTTACCAAGAAAAACATCCTAATATGAGTAAAAATGTTTACCAATCTATTTGCTTTCTTGGCCTCTCTAACTTTCTCCTTCACAAAATCCTAAATAATTGAGAACCCTCATCAGGTAAGCCTTTTGTAAAGATGAATAACAGTAACATGTCTACAACACTTGACAAACTATTACCTTGAAGGAATCCTTTTGACTTTCCGGTAATTCTTCCTCCTCAATCAACTTATCCGTGAATTCCTAAAGATACGTGAAAACAGAGCATAAAGATAAAACTCTTAAGGAAATTTTTTCCTTAGAAAGAAAATTTTATTGTACCTCGAGTTCATCCAATTCCCAATCAAACTCACAGAAAACCTGCAGATAACAAAAAATTGAAACGTAAATTTAAATTGTGAGCATATAAATTTCAGATTGTGAATAAGAATGCTCAACTAGTTTCTTCCCCACACACTATGCATTCATTAGCCTTTTTAAACAGTGAGAATTAAAAGCTTACTGGCTTTGGGTCGATTGGGAAGATAATTGGAACCTCAGTGCTTTGTTCAACTTCATCTTCCTTAAAGGGATGGTAGAAATCTGCCAGAAAAATGACAGTACGAGATATGACAAACATATATAGACTTCAACGATAACCATAGCTGGATGATCTAGTTGACATTAAAAATCAACAAAATTGAAAATTTGTGTGAGAAAACTTGCAATGGCCCAAGCCCACCGCTAGCCGATATTGTCCTCTTTGGACTTTCCCTCAAGGCTTTAAAACACGTCTATTAGGGGAAGGTTTCCACACCCTTATAAAGGATGTTTCGTTCTCCTCCCCCAACCAACGTGGGACTTTCTCAAAACTAAGGTAAAGATCTGTTTTCCTCTCAAGAGGATAGTTCATCCAATAAATTATCAATCATAAAGTTAACTACCATATCGTTCGAAGAACTTACATGGTAAGCAATACTCAAATTTCTTGACACGATCTATTTTCAAATGCTTCAAACCAGCTCTGCAGAAACGATCAATCCATTTATGAATAAGAACAATCAAAGGGTAGCAATAAAACAATTTATTGAAATTGTGAGTGAATACCAAATGGATGTGGAAAGTCATTCATGTTTGTACCTTCTCTGAGTGCAACTGAGGATGAATATTTGAGATTTCAACTTATCAACTTGACTACCTCTGAAGAAGAATTAAATTGAATGGTCAATTATAAAACTTGAGTTACAATCTAAAGGATGCTAAGAAAAAAAAAATCACAAATTAGTACCTTTGGTCCAAGGGAATATAAGGAACCCAGTCCATTTTCATCTGTTTCATGGGAACTATCTCTTCAGCCTCTCTTTGAACAGAGTTGATGCCAATTTTATCAGAAGGTGGGAAAGGAGATGCAACCTGTAGAACCATAA

mRNA sequence

ATGCACAAGCGAAACCTCACAACCACCGTCAGCCCCGTCGGCAGCCCAACCTCCGACAACATATCCGACAGCTCCACTAAAGAACAGGACAGGTTTCTTCCGATCGCAAACGTGAGCCGAATCATGAAAAAATCCCTTCCTGCTAACGCCAAAATCTCAAAAGAAGCTAAAGAGACCGTCCAGGAATGCGTGTCGGAGTTCATCAGCTTCATCACTGGCGAGGCCTCCGATAAGTGTCAAAGGGAAAAACGGAAGACGATCAACGGCGACGATTTGCTGTGGGCTATGACCACTTTGGGATTCGAAAATTACGTTGGCCCTTTGAAGATTTATCTCAACAAATACAGAGAAACAGAGGAGGAGAAACATTCTTTAGCCAGACAGGACGATCCCTCCCCGTCACCGACGAAATCCGCCGCCGCCACCGTCGAACAGATTATCCGTGGGAAATCGGCCAATCCGAATTCTAACCAAGGAGAAGACGAAGACAAGAGTGGAAGAAGGAAGGTGGGAAAGGAGATGCAACCTGTAGAACCATAA

Coding sequence (CDS)

ATGCACAAGCGAAACCTCACAACCACCGTCAGCCCCGTCGGCAGCCCAACCTCCGACAACATATCCGACAGCTCCACTAAAGAACAGGACAGGTTTCTTCCGATCGCAAACGTGAGCCGAATCATGAAAAAATCCCTTCCTGCTAACGCCAAAATCTCAAAAGAAGCTAAAGAGACCGTCCAGGAATGCGTGTCGGAGTTCATCAGCTTCATCACTGGCGAGGCCTCCGATAAGTGTCAAAGGGAAAAACGGAAGACGATCAACGGCGACGATTTGCTGTGGGCTATGACCACTTTGGGATTCGAAAATTACGTTGGCCCTTTGAAGATTTATCTCAACAAATACAGAGAAACAGAGGAGGAGAAACATTCTTTAGCCAGACAGGACGATCCCTCCCCGTCACCGACGAAATCCGCCGCCGCCACCGTCGAACAGATTATCCGTGGGAAATCGGCCAATCCGAATTCTAACCAAGGAGAAGACGAAGACAAGAGTGGAAGAAGGAAGGTGGGAAAGGAGATGCAACCTGTAGAACCATAA

Protein sequence

MHKRNLTTTVSPVGSPTSDNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQDDPSPSPTKSAAATVEQIIRGKSANPNSNQGEDEDKSGRRKVGKEMQPVEP
Homology
[Close]
BLAST of CmaCh16G006660 vs. ExPASy Swiss-Prot
Match: Q0J7P4 (Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=39947 GN=HD5 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.1e-45
Identity = 99/142 (69.72%), Postives = 104/142 (73.24%), Query Frame = 0 

Query: 10  VSPVGSPTSDNIS-----------------------------DSSTKEQDRFLPIANVSR 69
           +SPVGSP  DN S                             DS  KEQDRFLPIANVSR
Sbjct: 11  LSPVGSPPLDNESGEAAAAAAAGGGGCGSSAGYVVYGGGGGGDSPAKEQDRFLPIANVSR 70

Query: 70  IMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLG 123
           IMK+SLPANAKISKE+KETVQECVSEFISF+TGEASDKCQREKRKTINGDDLLWAMTTLG
Sbjct: 71  IMKRSLPANAKISKESKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLG 130

[Close]
BLAST of CmaCh16G006660 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.1e-45
Identity = 93/109 (85.32%), Postives = 101/109 (92.66%), Query Frame = 0 

Query: 23  DSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQRE 82
           ++ST+EQDRFLPIANVSRIMKK+LPANAKISK+AKETVQECVSEFISFITGEASDKCQRE
Sbjct: 16  NASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 75

Query: 83  KRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLA-RQDD 131
           KRKTINGDDLLWAMTTLGFE+YV PLK+YL KYRE E EK + A RQ D
Sbjct: 76  KRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAGRQGD 124

[Close]
BLAST of CmaCh16G006660 vs. ExPASy Swiss-Prot
Match: Q69J40 (Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.9e-43
Identity = 90/115 (78.26%), Postives = 100/115 (86.96%), Query Frame = 0 

Query: 16  PTSDNISD--------SSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEF 75
           P SDN S         +S +EQDRFLPIANVSRIMK++LPANAKISK+AKETVQECVSEF
Sbjct: 2   PDSDNESGGPSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEF 61

Query: 76  ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEK 123
           ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+Y+ PLK+YL+K+RE E EK
Sbjct: 62  ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEK 116

[Close]
BLAST of CmaCh16G006660 vs. ExPASy Swiss-Prot
Match: Q9SIT9 (Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana OX=3702 GN=NFYB7 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.4e-43
Identity = 87/116 (75.00%), Postives = 102/116 (87.93%), Query Frame = 0 

Query: 14  GSPTS-DNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFIT 73
           GSP+S  N ++++ KEQDRFLPIANV RIMKK LP N KISK+AKETVQECVSEFISF+T
Sbjct: 21  GSPSSKTNNNNNNNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVT 80

Query: 74  GEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQ 129
           GEASDKCQREKRKTINGDD++WA+TTLGFE+YV PLK+YL KYR+TE EK +  +Q
Sbjct: 81  GEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNSPKQ 136

[Close]
BLAST of CmaCh16G006660 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 8.4e-43
Identity = 85/106 (80.19%), Postives = 96/106 (90.57%), Query Frame = 0 

Query: 22  SDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQR 81
           S  S +EQDRFLPIANVSRIMKK+LPANAKISK+AKET+QECVSEFISF+TGEASDKCQ+
Sbjct: 21  SSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQK 80

Query: 82  EKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLAR 128
           EKRKTINGDDLLWAMTTLGFE+YV PLK+YL ++RE E E+  L R
Sbjct: 81  EKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTGLGR 126

[Close]
BLAST of CmaCh16G006660 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 183.0 bits (463), Expect = 2.2e-46
Identity = 93/109 (85.32%), Postives = 101/109 (92.66%), Query Frame = 0 

Query: 23  DSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQRE 82
           ++ST+EQDRFLPIANVSRIMKK+LPANAKISK+AKETVQECVSEFISFITGEASDKCQRE
Sbjct: 16  NASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 75

Query: 83  KRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLA-RQDD 131
           KRKTINGDDLLWAMTTLGFE+YV PLK+YL KYRE E EK + A RQ D
Sbjct: 76  KRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAGRQGD 124

[Close]
BLAST of CmaCh16G006660 vs. TAIR 10
Match: AT2G13570.1 (nuclear factor Y, subunit B7 )

HSP 1 Score: 175.3 bits (443), Expect = 4.5e-44
Identity = 87/116 (75.00%), Postives = 102/116 (87.93%), Query Frame = 0 

Query: 14  GSPTS-DNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFIT 73
           GSP+S  N ++++ KEQDRFLPIANV RIMKK LP N KISK+AKETVQECVSEFISF+T
Sbjct: 21  GSPSSKTNNNNNNNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVT 80

Query: 74  GEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQ 129
           GEASDKCQREKRKTINGDD++WA+TTLGFE+YV PLK+YL KYR+TE EK +  +Q
Sbjct: 81  GEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNSPKQ 136

[Close]
BLAST of CmaCh16G006660 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 174.9 bits (442), Expect = 5.9e-44
Identity = 85/106 (80.19%), Postives = 96/106 (90.57%), Query Frame = 0 

Query: 22  SDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQR 81
           S  S +EQDRFLPIANVSRIMKK+LPANAKISK+AKET+QECVSEFISF+TGEASDKCQ+
Sbjct: 21  SSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQK 80

Query: 82  EKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLAR 128
           EKRKTINGDDLLWAMTTLGFE+YV PLK+YL ++RE E E+  L R
Sbjct: 81  EKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTGLGR 126

[Close]
BLAST of CmaCh16G006660 vs. TAIR 10
Match: AT2G37060.1 (nuclear factor Y, subunit B8 )

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-40
Identity = 83/127 (65.35%), Postives = 99/127 (77.95%), Query Frame = 0 

Query: 11  SPVGSPTSDNISDSS-----TKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVS 70
           SP G  + ++  D S      +EQDRFLPIAN+SRIMK+ LPAN KI+K+AKE VQECVS
Sbjct: 8   SPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVS 67

Query: 71  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSL 130
           EFISF+T EASDKCQREKRKTINGDDLLWAM TLGFE+Y+ PLK+YL +YRE E +    
Sbjct: 68  EFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKGS 127

Query: 131 ARQDDPS 133
           A+  DP+
Sbjct: 128 AKGGDPN 134

[Close]
BLAST of CmaCh16G006660 vs. TAIR 10
Match: AT2G37060.2 (nuclear factor Y, subunit B8 )

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-40
Identity = 83/127 (65.35%), Postives = 99/127 (77.95%), Query Frame = 0 

Query: 11  SPVGSPTSDNISDSS-----TKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVS 70
           SP G  + ++  D S      +EQDRFLPIAN+SRIMK+ LPAN KI+K+AKE VQECVS
Sbjct: 8   SPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVS 67

Query: 71  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSL 130
           EFISF+T EASDKCQREKRKTINGDDLLWAM TLGFE+Y+ PLK+YL +YRE E +    
Sbjct: 68  EFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKGS 127

Query: 131 ARQDDPS 133
           A+  DP+
Sbjct: 128 AKGGDPN 134

The following BLAST results are available for this feature:
BLAST of CmaCh16G006660 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q0J7P43.1e-4569.72Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=3... [more]
O233103.1e-4585.32Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
Q69J402.9e-4378.26Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=3... [more]
Q9SIT96.4e-4375.00Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
Q9FGJ38.4e-4380.19Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
BLAST of CmaCh16G006660 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G14540.12.2e-4685.32nuclear factor Y, subunit B3 [more]
AT2G13570.14.5e-4475.00nuclear factor Y, subunit B7 [more]
AT5G47640.15.9e-4480.19nuclear factor Y, subunit B2 [more]
AT2G37060.11.0e-4065.35nuclear factor Y, subunit B8 [more]
AT2G37060.21.0e-4065.35nuclear factor Y, subunit B8 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..128
NoneNo IPR availablePRINTSPR00615CCAATSUBUNTAcoord: 60..78
score: 50.24
coord: 98..116
score: 41.63
coord: 79..97
score: 38.52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..179
NoneNo IPR availablePANTHERPTHR11064:SF98NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11coord: 14..160
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 32..96
e-value: 4.1E-27
score: 94.2
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 21..169
e-value: 9.0E-48
score: 163.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 29..155
IPR027113Transcription factor NFYB/HAP3PANTHERPTHR11064CCAAT-BINDING TRANSCRIPTION FACTOR-RELATEDcoord: 14..160
IPR003956Transcription factor, NFYB/HAP3, conserved sitePROSITEPS00685NFYB_HAP3coord: 63..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G006660.1CmaCh16G006660.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016602 CCAAT-binding factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding