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CmaCh16G006540 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAGAAGTCAACGTCTCTCCCAGATCTGTGTAAGGTGAAGCAATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTCCTTATTTGTACATGCCATGGCGCCGCCGCTCATCGGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTGTTGATTTCAAGGAGCTGTACGTTCGACTGTCGGGAGACTATCTGATGGCCGAGGCGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACGGTTTTCAACCTCTACGCCATCTGGGCTGCAAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCACTGCTATGGTATATTCTACTTCTCTCCTACCATCATGTGATTGATGAATTTCTATAATTGCCCACATATTCTCCTTCTCCAACTTTCTCTTTTCCTAACCGGGAATTCCGATGTGGGATCCACAATCCACTCCTTTTGGAGTCAACGTCCTAACTGGTACTCGTTCTTTTTGGAACCCAACGTCCTATTCTGGCACATCACCTTGTGTTCACCCCTGCCACTTATTTCTTTCTCTAATCAACGTGAGACTCCCAATCCACTCCCTTTCGGAGTGATACACCACCTTGTGTCCACCCTTTTCGGGGCTCAGCCTCCCCACTGGCACATCCTCCGTGTTTGCCTCTGATATCACTTGCAACCGCTCAAGCCCGCCATTAACAAATAATATCTTCTTTGAATTTTTCTTTTTGAATTTTTTCTCAAATTTTAAAAATGTATTTACTAGGGAAAGGTTTTCAGGCTCCTAAATAAATGTTTGTTTTCCTCTCCAACGGATGGTTGTAAATGAATAAGCCTATTTTAGGTTCTTTTTTCAGGTTGCTATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGACTGCTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTAGCCACGCTACGTGGGCTGCTGCCGCGTTGCAGCAAGGCTACGCCCACCGGCCACGACGTTGGACCATCAATTGCCGGCAAAAAGAAGGTTTGA GAGAAGTCAACGTCTCTCCCAGATCTGTGTAAGGTGAAGCAATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTCCTTATTTGTACATGCCATGGCGCCGCCGCTCATCGGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTGTTGATTTCAAGGAGCTGTACGTTCGACTGTCGGGAGACTATCTGATGGCCGAGGCGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACGGTTTTCAACCTCTACGCCATCTGGGCTGCAAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCACTGCTATGAGGGCATCTGGACTGCTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTAGCCACGCTACGTGGGCTGCTGCCGCGTTGCAGCAAGGCTACGCCCACCGGCCACGACGTTGGACCATCAATTGCCGGCAAAAAGAAGGTTTGA ATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTCCTTATTTGTACATGCCATGGCGCCGCCGCTCATCGGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTGTTGATTTCAAGGAGCTGTACGTTCGACTGTCGGGAGACTATCTGATGGCCGAGGCGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACGGTTTTCAACCTCTACGCCATCTGGGCTGCAAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCACTGCTATGAGGGCATCTGGACTGCTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTAGCCACGCTACGTGGGCTGCTGCCGCGTTGCAGCAAGGCTACGCCCACCGGCCACGACGTTGGACCATCAATTGCCGGCAAAAAGAAGGTTTGA MGVLLKLFDSVLFVSLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFTAMRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV Homology
BLAST of CmaCh16G006540 vs. ExPASy Swiss-Prot
Match: Q6DFQ5 (Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05 Identity = 32/111 (28.83%), Postives = 52/111 (46.85%), Query Frame = 0
BLAST of CmaCh16G006540 vs. TAIR 10
Match: AT2G32380.1 (Transmembrane protein 97, predicted ) HSP 1 Score: 131.0 bits (328), Expect = 8.6e-31 Identity = 77/169 (45.56%), Postives = 105/169 (62.13%), Query Frame = 0
BLAST of CmaCh16G006540 vs. TAIR 10
Match: AT1G05210.1 (Transmembrane protein 97, predicted ) HSP 1 Score: 130.2 bits (326), Expect = 1.5e-30 Identity = 74/152 (48.68%), Postives = 92/152 (60.53%), Query Frame = 0
BLAST of CmaCh16G006540 vs. TAIR 10
Match: AT1G05220.1 (Transmembrane protein 97, predicted ) HSP 1 Score: 104.8 bits (260), Expect = 6.6e-23 Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 0
BLAST of CmaCh16G006540 vs. TAIR 10
Match: AT1G05220.2 (Transmembrane protein 97, predicted ) HSP 1 Score: 104.8 bits (260), Expect = 6.6e-23 Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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