Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTCTCCTTCTTCCCCTCTTCCCCCTTTTAATGGCGCTCCTCCTTCCACTTCAAGCCAAGACCCATTGGGAAGACACCCAGGTTCTCAAACAGCTCAAGAACGCTCTCGACCCGACCTCTATCCCCTCCGGCTCCTGTCTCGAATCCTGGGATTTCTCTCTCGACCCATGTGATAATCTCTTCGGCCACAAGTTCACCTGCGGTTTCCGCTGCGACGACGTCGTCTCCGGCGTCTCCCGAGTCACCGACCTCACCCTCGACCACGCTGGCTACTCCGCCTCCCTTTCCTCTGTTTTCTGGAACCTCCCTTTTCTGCAATCGCTCGATTTCTCCAATAATTTCTTCTCTGGTCCGATTCCCAACTCCTTCTCCAATTTGACTCGGTTGCGTTCACTCAGTCTCTCTTCCAACTCGTTTTCTGGCGAGGTTCCGCCCTCAATCGGCTCGCTCTCTGCGCTCGAGGAGCTTTATTTGAATGGAAATGGGTTTAATGGCTCTATTCCGGCGAGTTTTGTGGGGCTTGTTAGTTTGAAGCGGCTGGAATTGCAGTCTAATGGGTTCACCGGTGCGTTTCCTGATTTGGGTGTTTTGAAGAATTTGTATTATTTGGATGGAACTGATAATGGGTTTTCTGGAGAGCTTCCGGCGGGTTTTCCGGCGTCGTTGGTTCAATTATTGATGAGGAATAATAGCTTTGAAGGAGTGGTTCCGAGTAGTATTGGCGATTTGGGTAATCTTCAAGTTGTGGATCTGAGTCATAATCAATTCAGTGGCTCTGTTCCGGCGGCTCTGTTTGAACATCCGTCTTTGGAACAACTTACTCTCTCTTTCAACCAATTCTCCGCCGTGGAAACACCAAATTCCAGCGGTGCTCGGAGTAGTCTCATCGCCGTCGATTTAAGCGACAACGAAATCACTGGATTTCTGCCGCCGTTCCTAGCGTTAATGCCGAAGCTCTCTGCTTTGTCACTGGAGAACAACAACTTCACCGGAATGATTCCGGTTCTCTACGCCTTCAAAACCGCCAAACCAGAGCCGGGAATGTCACCGTTAGTAAGACTATTATTGGGCGGAAACTATCTATTCGGTCCAATCCCGGAGCCACTACGGCTGATGAAACCCGACTCGGCCACCGTGACACTCGCCGGGAACTGCCTGTTCCGTTGCCCGACATTCTTGTTCTTCTGCCAAGGAGGCGAGCAGAAATCCTCCGCCGAATGCCGGAGCGCCGGGCCGGTAATCCCATAA
mRNA sequence
ATGGCTTCTCTCCTTCTTCCCCTCTTCCCCCTTTTAATGGCGCTCCTCCTTCCACTTCAAGCCAAGACCCATTGGGAAGACACCCAGGTTCTCAAACAGCTCAAGAACGCTCTCGACCCGACCTCTATCCCCTCCGGCTCCTGTCTCGAATCCTGGGATTTCTCTCTCGACCCATGTGATAATCTCTTCGGCCACAAGTTCACCTGCGGTTTCCGCTGCGACGACGTCGTCTCCGGCGTCTCCCGAGTCACCGACCTCACCCTCGACCACGCTGGCTACTCCGCCTCCCTTTCCTCTGTTTTCTGGAACCTCCCTTTTCTGCAATCGCTCGATTTCTCCAATAATTTCTTCTCTGGTCCGATTCCCAACTCCTTCTCCAATTTGACTCGGTTGCGTTCACTCAGTCTCTCTTCCAACTCGTTTTCTGGCGAGGTTCCGCCCTCAATCGGCTCGCTCTCTGCGCTCGAGGAGCTTTATTTGAATGGAAATGGGTTTAATGGCTCTATTCCGGCGAGTTTTGTGGGGCTTGTTAGTTTGAAGCGGCTGGAATTGCAGTCTAATGGGTTCACCGGTGCGTTTCCTGATTTGGGTGTTTTGAAGAATTTGTATTATTTGGATGGAACTGATAATGGGTTTTCTGGAGAGCTTCCGGCGGGTTTTCCGGCGTCGTTGGTTCAATTATTGATGAGGAATAATAGCTTTGAAGGAGTGGTTCCGAGTAGTATTGGCGATTTGGGTAATCTTCAAGTTGTGGATCTGAGTCATAATCAATTCAGTGGCTCTGTTCCGGCGGCTCTGTTTGAACATCCGTCTTTGGAACAACTTACTCTCTCTTTCAACCAATTCTCCGCCGTGGAAACACCAAATTCCAGCGGTGCTCGGAGTAGTCTCATCGCCGTCGATTTAAGCGACAACGAAATCACTGGATTTCTGCCGCCGTTCCTAGCGTTAATGCCGAAGCTCTCTGCTTTGTCACTGGAGAACAACAACTTCACCGGAATGATTCCGGTTCTCTACGCCTTCAAAACCGCCAAACCAGAGCCGGGAATGTCACCGTTAGTAAGACTATTATTGGGCGGAAACTATCTATTCGGTCCAATCCCGGAGCCACTACGGCTGATGAAACCCGACTCGGCCACCGTGACACTCGCCGGGAACTGCCTGTTCCGTTGCCCGACATTCTTGTTCTTCTGCCAAGGAGGCGAGCAGAAATCCTCCGCCGAATGCCGGAGCGCCGGGCCGGTAATCCCATAA
Coding sequence (CDS)
ATGGCTTCTCTCCTTCTTCCCCTCTTCCCCCTTTTAATGGCGCTCCTCCTTCCACTTCAAGCCAAGACCCATTGGGAAGACACCCAGGTTCTCAAACAGCTCAAGAACGCTCTCGACCCGACCTCTATCCCCTCCGGCTCCTGTCTCGAATCCTGGGATTTCTCTCTCGACCCATGTGATAATCTCTTCGGCCACAAGTTCACCTGCGGTTTCCGCTGCGACGACGTCGTCTCCGGCGTCTCCCGAGTCACCGACCTCACCCTCGACCACGCTGGCTACTCCGCCTCCCTTTCCTCTGTTTTCTGGAACCTCCCTTTTCTGCAATCGCTCGATTTCTCCAATAATTTCTTCTCTGGTCCGATTCCCAACTCCTTCTCCAATTTGACTCGGTTGCGTTCACTCAGTCTCTCTTCCAACTCGTTTTCTGGCGAGGTTCCGCCCTCAATCGGCTCGCTCTCTGCGCTCGAGGAGCTTTATTTGAATGGAAATGGGTTTAATGGCTCTATTCCGGCGAGTTTTGTGGGGCTTGTTAGTTTGAAGCGGCTGGAATTGCAGTCTAATGGGTTCACCGGTGCGTTTCCTGATTTGGGTGTTTTGAAGAATTTGTATTATTTGGATGGAACTGATAATGGGTTTTCTGGAGAGCTTCCGGCGGGTTTTCCGGCGTCGTTGGTTCAATTATTGATGAGGAATAATAGCTTTGAAGGAGTGGTTCCGAGTAGTATTGGCGATTTGGGTAATCTTCAAGTTGTGGATCTGAGTCATAATCAATTCAGTGGCTCTGTTCCGGCGGCTCTGTTTGAACATCCGTCTTTGGAACAACTTACTCTCTCTTTCAACCAATTCTCCGCCGTGGAAACACCAAATTCCAGCGGTGCTCGGAGTAGTCTCATCGCCGTCGATTTAAGCGACAACGAAATCACTGGATTTCTGCCGCCGTTCCTAGCGTTAATGCCGAAGCTCTCTGCTTTGTCACTGGAGAACAACAACTTCACCGGAATGATTCCGGTTCTCTACGCCTTCAAAACCGCCAAACCAGAGCCGGGAATGTCACCGTTAGTAAGACTATTATTGGGCGGAAACTATCTATTCGGTCCAATCCCGGAGCCACTACGGCTGATGAAACCCGACTCGGCCACCGTGACACTCGCCGGGAACTGCCTGTTCCGTTGCCCGACATTCTTGTTCTTCTGCCAAGGAGGCGAGCAGAAATCCTCCGCCGAATGCCGGAGCGCCGGGCCGGTAATCCCATAA
Protein sequence
MASLLLPLFPLLMALLLPLQAKTHWEDTQVLKQLKNALDPTSIPSGSCLESWDFSLDPCDNLFGHKFTCGFRCDDVVSGVSRVTDLTLDHAGYSASLSSVFWNLPFLQSLDFSNNFFSGPIPNSFSNLTRLRSLSLSSNSFSGEVPPSIGSLSALEELYLNGNGFNGSIPASFVGLVSLKRLELQSNGFTGAFPDLGVLKNLYYLDGTDNGFSGELPAGFPASLVQLLMRNNSFEGVVPSSIGDLGNLQVVDLSHNQFSGSVPAALFEHPSLEQLTLSFNQFSAVETPNSSGARSSLIAVDLSDNEITGFLPPFLALMPKLSALSLENNNFTGMIPVLYAFKTAKPEPGMSPLVRLLLGGNYLFGPIPEPLRLMKPDSATVTLAGNCLFRCPTFLFFCQGGEQKSSAECRSAGPVIP
Homology
BLAST of CmaCh16G006450 vs. ExPASy Swiss-Prot
Match:
Q9SRL2 (Receptor-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=RLP34 PE=2 SV=1)
HSP 1 Score: 177.2 bits (448), Expect = 3.9e-43
Identity = 121/316 (38.29%), Postives = 165/316 (52.22%), Query Frame = 0
Query: 59 CDNLFGHKFTCGFRCDDVVSGVSRVTDLTLDHAGYSASLSSVFWNLPFLQSLDFSNNFFS 118
C +L G F + + + +T L H + ++S NL L SLD S N FS
Sbjct: 104 CSSLHGR-----FHSNSSIRNLHFLTTLDRSHNDFEGQITSSIENLSHLTSLDLSYNRFS 163
Query: 119 GPIPNSFSNLTRLRSLSLSSNSFSGEVPPSIGSLSALEELYLNGNGFNGSIPASFVGLVS 178
G I NS NL+RL SL LS N FSG++P SIG+LS L L L+GN F G IP+S L
Sbjct: 164 GQILNSIGNLSRLTSLDLSFNQFSGQIPSSIGNLSHLTFLGLSGNRFFGQIPSSIGNLSH 223
Query: 179 LKRLELQSNGFTGAFP-DLGVLKNLYYLDGTDNGFSGELPA--GFPASLVQLLMRNNSFE 238
L L L N F G FP +G L NL L + N +SG++P+ G + L+ L + N+F
Sbjct: 224 LTFLGLSGNRFFGQFPSSIGGLSNLTNLHLSYNKYSGQIPSSIGNLSQLIVLYLSVNNFY 283
Query: 239 GVVPSSIGDLGNLQVVDLSHNQFSGSVPAALFEHPSLEQLTLSFNQFSAVETPNSSGARS 298
G +PSS G+L L +D+S N+ G+ P L L ++LS N+F+ PN + + S
Sbjct: 284 GEIPSSFGNLNQLTRLDVSFNKLGGNFPNVLLNLTGLSVVSLSNNKFTGTLPPNIT-SLS 343
Query: 299 SLIAVDLSDNEITGFLPPFLALMPKLSALSLENNNFTGMIPVLYAFKTAKPEPGMSPLVR 358
+L+A SDN TG P FL ++P L+ L L N G L + P S L
Sbjct: 344 NLMAFYASDNAFTGTFPSFLFIIPSLTYLGLSGNQLKG---TLEFGNISSP----SNLQY 403
Query: 359 LLLGGNYLFGPIPEPL 372
L +G N GPIP +
Sbjct: 404 LNIGSNNFIGPIPSSI 406
BLAST of CmaCh16G006450 vs. ExPASy Swiss-Prot
Match:
G9LZD7 (Probable inactive leucine-rich repeat receptor kinase XIAO OS=Oryza sativa subsp. japonica OX=39947 GN=XIAO PE=2 SV=1)
HSP 1 Score: 171.0 bits (432), Expect = 2.8e-41
Identity = 114/296 (38.51%), Postives = 154/296 (52.03%), Query Frame = 0
Query: 77 VSGVSRVTDLTLDHAGYSASLSSVFWNLPFLQSLDFSNNFFSGPIPNSFSNLTRLRSLSL 136
++G +T L L ++ + L LQ L N F+G +P L+ L L
Sbjct: 340 LAGAGGLTVLDLSGNAFTGEVPPAVGQLTALQELRLGGNAFTGTVPAEIGRCGALQVLDL 399
Query: 137 SSNSFSGEVPPSIGSLSALEELYLNGNGFNGSIPASFVGLVSLKRLELQSNGFTGAFP-D 196
N FSGEVP ++G L L E+YL GN F+G IPAS L L+ L N TG P +
Sbjct: 400 EDNRFSGEVPAALGGLRRLREVYLGGNSFSGQIPASLGNLSWLEALSTPGNRLTGDLPSE 459
Query: 197 LGVLKNLYYLDGTDNGFSGELP--AGFPASLVQLLMRNNSFEGVVPSSIGDLGNLQVVDL 256
L VL NL +LD +DN +GE+P G A+L L + NSF G +PS+IG+L NL+V+DL
Sbjct: 460 LFVLGNLTFLDLSDNKLAGEIPPSIGNLAALQSLNLSGNSFSGRIPSNIGNLLNLRVLDL 519
Query: 257 S-HNQFSGSVPAALFEHPSLEQLTLSFNQFSAVETPNSSGARSSLIAVDLSDNEITGFLP 316
S SG++PA LF P L+ ++L+ N FS + P + SL ++LS N TG +P
Sbjct: 520 SGQKNLSGNLPAELFGLPQLQYVSLAGNSFSG-DVPEGFSSLWSLRHLNLSVNSFTGSMP 579
Query: 317 PFLALMPKLSALSLENNNFTGMIPVLYAFKTAKPEPGMSPLVRLLLGGNYLFGPIP 369
+P L LS +N G +PV A S L L L N L GPIP
Sbjct: 580 ATYGYLPSLQVLSASHNRICGELPVELA--------NCSNLTVLDLRSNQLTGPIP 626
BLAST of CmaCh16G006450 vs. ExPASy Swiss-Prot
Match:
Q9SRL7 (Receptor-like protein 35 OS=Arabidopsis thaliana OX=3702 GN=RLP35 PE=3 SV=1)
HSP 1 Score: 167.9 bits (424), Expect = 2.4e-40
Identity = 119/325 (36.62%), Postives = 164/325 (50.46%), Query Frame = 0
Query: 50 ESWDFSLDPCDNLFGHKFTCGFRCDDVVSGVSRVTDLTLDHAGYSASLSSVFWNLPFLQS 109
ESW + D C+ TC + +V+ DL+ S +S + L L+
Sbjct: 78 ESWRNNSDCCN---WEGITCDTKSGEVIE-----LDLSCSWLYGSFHSNSSLFRLQNLRV 137
Query: 110 LDFSNNFFSGPIPNSFSNLTRLRSLSLSSNSFSGEVPPSIGSLSALEELYLNGNGFNGSI 169
LD + N G IP+S NL+ L SL LS N F G +P SI +LS L L+L+ N F+G I
Sbjct: 138 LDLTQNDLDGEIPSSIGNLSHLTSLHLSYNQFLGLIPSSIENLSRLTSLHLSSNQFSGQI 197
Query: 170 PASFVGLVSLKRLELQSNGFTGAFP-DLGVLKNLYYLDGTDNGFSGELPA--GFPASLVQ 229
P+S L L LEL SN F+G P +G L NL +L N F G++P+ G A L
Sbjct: 198 PSSIGNLSHLTSLELSSNQFSGQIPSSIGNLSNLTFLSLPSNDFFGQIPSSIGNLARLTY 257
Query: 230 LLMRNNSFEGVVPSSIGDLGNLQVVDLSHNQFSGSVPAALFEHPSLEQLTLSFNQFSAVE 289
L + N+F G +PSS G+L L V+ + N+ SG+VP +L L L LS NQF+
Sbjct: 258 LYLSYNNFVGEIPSSFGNLNQLIVLQVDSNKLSGNVPISLLNLTRLSALLLSHNQFTGT- 317
Query: 290 TPNSSGARSSLIAVDLSDNEITGFLPPFLALMPKLSALSLENNNFTGMIPVLYAFKTAKP 349
PN+ S+L+ + S+N TG LP L +P L L L +N G L+ + P
Sbjct: 318 IPNNISLLSNLMDFEASNNAFTGTLPSSLFNIPPLIRLDLSDNQLNG---TLHFGNISSP 377
Query: 350 EPGMSPLVRLLLGGNYLFGPIPEPL 372
S L L++G N G IP L
Sbjct: 378 ----SNLQYLIIGSNNFIGTIPRSL 386
BLAST of CmaCh16G006450 vs. ExPASy Swiss-Prot
Match:
Q9S9U3 (Receptor-like protein 53 OS=Arabidopsis thaliana OX=3702 GN=RLP53 PE=3 SV=1)
HSP 1 Score: 167.2 bits (422), Expect = 4.1e-40
Identity = 117/316 (37.03%), Postives = 162/316 (51.27%), Query Frame = 0
Query: 59 CDNLFGHKFTCGFRCDDVVSGVSRVTDLTLDHAGYSASLSSVFWNLPFLQSLDFSNNFFS 118
C +L G F + + + +T L L + ++S NL L LD S+N FS
Sbjct: 104 CSSLHGR-----FHSNSSIRNLHFLTTLDLSFNDFKGQITSSIENLSHLTYLDLSSNHFS 163
Query: 119 GPIPNSFSNLTRLRSLSLSSNSFSGEVPPSIGSLSALEELYLNGNGFNGSIPASFVGLVS 178
G I NS NL+RL L+L N FSG+ P SI +LS L L L+ N F G P+S GL
Sbjct: 164 GQILNSIGNLSRLTYLNLFDNQFSGQAPSSICNLSHLTFLDLSYNRFFGQFPSSIGGLSH 223
Query: 179 LKRLELQSNGFTGAFP-DLGVLKNLYYLDGTDNGFSGELPA--GFPASLVQLLMRNNSFE 238
L L L SN F+G P +G L NL LD ++N FSG++P+ G + L L + +N+F
Sbjct: 224 LTTLSLFSNKFSGQIPSSIGNLSNLTTLDLSNNNFSGQIPSFIGNLSQLTFLGLFSNNFV 283
Query: 239 GVVPSSIGDLGNLQVVDLSHNQFSGSVPAALFEHPSLEQLTLSFNQFSAVETPNSSGARS 298
G +PSS G+L L + + N+ SG+ P L L L+LS N+F+ PN + + S
Sbjct: 284 GEIPSSFGNLNQLTRLYVDDNKLSGNFPNVLLNLTGLSLLSLSNNKFTGTLPPNIT-SLS 343
Query: 299 SLIAVDLSDNEITGFLPPFLALMPKLSALSLENNNFTGMIPVLYAFKTAKPEPGMSPLVR 358
+L+ D SDN TG P FL +P L+ + L N G L + P S L
Sbjct: 344 NLMDFDASDNAFTGTFPSFLFTIPSLTYIRLNGNQLKG---TLEFGNISSP----SNLYE 403
Query: 359 LLLGGNYLFGPIPEPL 372
L +G N GPIP +
Sbjct: 404 LDIGNNNFIGPIPSSI 406
BLAST of CmaCh16G006450 vs. ExPASy Swiss-Prot
Match:
Q9LJW7 (Receptor-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=RLP43 PE=2 SV=1)
HSP 1 Score: 164.9 bits (416), Expect = 2.0e-39
Identity = 111/290 (38.28%), Postives = 154/290 (53.10%), Query Frame = 0
Query: 50 ESWDFSLDPCDNLFGHKFTCGFRCDDVVSGVSRVTDLTLDHAGYSASLSSVFWNLPFLQS 109
ESW + C N G TC + +V+ DL+ + +S NL FL +
Sbjct: 73 ESWGNNNSDCCNWEG--VTCNAKSGEVIE-----LDLSCSYLHGRFHSNSSIRNLHFLTT 132
Query: 110 LDFSNNFFSGPIPNSFSNLTRLRSLSLSSNSFSGEVPPSIGSLSALEELYLNGNGFNGSI 169
LD S N F G I +S NL+ L L LS N FSG+VP SIG+LS L L L N F+G +
Sbjct: 133 LDLSFNDFKGQIMSSIENLSHLTYLDLSFNHFSGQVPSSIGNLSHLTFLDLYCNQFSGQV 192
Query: 170 PASFVGLVSLKRLELQSNGFTGAFP-DLGVLKNLYYLDGTDNGFSGELPA--GFPASLVQ 229
P+S L L LEL N F G FP +G L +L L+ N F G++P+ G ++L
Sbjct: 193 PSSIGNLSHLTTLELSFNRFFGQFPSSIGGLSHLTTLNLFVNNFLGQIPSSIGNLSNLTS 252
Query: 230 LLMRNNSFEGVVPSSIGDLGNLQVVDLSHNQFSGSVPAALFEHPSLEQLTLSFNQFSAVE 289
L + N+F G +PS IG+L L +DLS N F G +P L+ P+L + LS+N F +
Sbjct: 253 LYLCKNNFSGQIPSFIGNLSQLTRLDLSSNNFFGEIPGWLWTLPNLFYVNLSYNTFIGFQ 312
Query: 290 TPNSSGARSSLIAVDLSDNEITGFLPPFLALMPKLSALSLENNNFTGMIP 337
PN S+ + S+N TG +P F+ + L L L +NNF+G+IP
Sbjct: 313 RPNK--PEPSMGHLLGSNNNFTGKIPSFICELRSLETLDLSDNNFSGLIP 353
BLAST of CmaCh16G006450 vs. TAIR 10
Match:
AT5G66330.1 (Leucine-rich repeat (LRR) family protein )
HSP 1 Score: 487.3 bits (1253), Expect = 1.3e-137
Identity = 245/419 (58.47%), Postives = 302/419 (72.08%), Query Frame = 0
Query: 1 MASLLLPLFPLLMALLLPLQAKTHWEDTQVLKQLKNALDPTSIPSGSCLESWDFSLDPCD 60
MAS L+ L LL+ L ++KT W D LK KN++D S+ GSCL SWDFS+DPCD
Sbjct: 1 MAS-LISLVLLLLLTLSSAESKTFWGDVAALKDFKNSVDAKSMSPGSCLSSWDFSVDPCD 60
Query: 61 NLFGHKFTCGFRCDDVVSGVSRVTDLTLDHAGYSASLSSVFWNLPFLQSLDFSNNFFSGP 120
N+F FTCGFRCD VV+G RVT+L+LD AGYS SLSSV +NLP+LQ+LD S N+FSGP
Sbjct: 61 NIFSDTFTCGFRCDSVVTGSGRVTELSLDQAGYSGSLSSVSFNLPYLQTLDLSGNYFSGP 120
Query: 121 IPNSFSNLTRLRSLSLSSNSFSGEVPPSIGSLSALEELYLNGNGFNGSIPASFVGLVSLK 180
+P+S SNLTRL L++S NSFSG +P S+GS++ LEEL L+ N GSIPASF GL SLK
Sbjct: 121 LPDSLSNLTRLTRLTVSGNSFSGSIPDSVGSMTVLEELVLDSNRLYGSIPASFNGLSSLK 180
Query: 181 RLELQSNGFTGAFPDLGVLKNLYYLDGTDNGFSGELPAGFPASLVQLLMRNNSFEGVVPS 240
RLE+Q N +G FPDL LKNLYYLD +DN SG +P+ P S+VQ+ MRNN F+G +P
Sbjct: 181 RLEIQLNNISGEFPDLSSLKNLYYLDASDNRISGRIPSFLPESIVQISMRNNLFQGTIPE 240
Query: 241 SIGDLGNLQVVDLSHNQFSGSVPAALFEHPSLEQLTLSFNQFSAVETPNSS--GARSSLI 300
S L +L+V+DLSHN+ SGS+P+ +F H SL+QLTLSFN F+++E+P S G S LI
Sbjct: 241 SFKLLNSLEVIDLSHNKLSGSIPSFIFTHQSLQQLTLSFNGFTSLESPYYSPLGLPSELI 300
Query: 301 AVDLSDNEITGFLPPFLALMPKLSALSLENNNFTGMIPVLYAFKTAKPEPGMSPLVRLLL 360
+VDLS+N+I G LP F+ L PKLSALSLENN F GMIP Y +KT P + RLLL
Sbjct: 301 SVDLSNNQILGALPLFMGLSPKLSALSLENNKFFGMIPTQYVWKTVSPGSEFAGFQRLLL 360
Query: 361 GGNYLFGPIPEPLRLMKPDSATVTLAGNCLFRCPTFLFFCQGGEQKSSAECRSAGPVIP 418
GGN+LFG +P PL +KP SA V LAGNC CP LFFCQG EQ+S ECR V+P
Sbjct: 361 GGNFLFGVVPGPLMALKPGSANVQLAGNCFSWCPATLFFCQGQEQRSPKECRKFSRVVP 418
BLAST of CmaCh16G006450 vs. TAIR 10
Match:
AT2G15320.1 (Leucine-rich repeat (LRR) family protein )
HSP 1 Score: 204.1 bits (518), Expect = 2.1e-52
Identity = 142/410 (34.63%), Postives = 209/410 (50.98%), Query Frame = 0
Query: 8 LFPLLMALLLPLQAKTHWEDTQVLKQLKNALDPTSIPSGSCLESWDFSL-DPCDNLFGHK 67
L LL+ L + T D LK K + P SIP SCL SWDF++ DPC +
Sbjct: 5 LLLLLLLLFSSADSLTSPSDVSALKAFKATVKPNSIPPWSCLASWDFTVSDPCASPRRTH 64
Query: 68 FTCGFRCDDVVSGVSRVTDLTLDHAGYSASLSSVFWNLPFLQSLDFSNNFFSGPIPNSFS 127
FTCG C S +RVT LTLD AGY+ L+ + L L +LD + N F G IP+S S
Sbjct: 65 FTCGITCS---SDSTRVTQLTLDPAGYTGRLTPLISGLTELLTLDLAENNFYGLIPSSIS 124
Query: 128 NLTRLRSLSLSSNSFSGEVPPSIGSLSALEELYLNGNGFNGSIPASFVGLVSLKRLELQS 187
+LT L++L L SNSFSG +P S+ L++LE + ++ N G +P + L +L++L+L
Sbjct: 125 SLTSLKTLILRSNSFSGSLPDSVTRLNSLESIDISHNSLTGPLPKTMNSLSNLRQLDLSY 184
Query: 188 NGFTGAFPDLGVLKNLYYLDGTDNGFSGELPAGFPASLVQLLMRNNSFEG-VVPSSIGDL 247
N TGA P L P +L+ L ++ N+ G + S +
Sbjct: 185 NKLTGAIPKL------------------------PKNLIDLALKANTLSGPISKDSFTES 244
Query: 248 GNLQVVDLSHNQFSGSVPAALFEHPSLEQLTLSFNQFSAVET--PNSSGARSSLIAVDLS 307
L++V+++ N F+G++ A F S++Q+ L+ N + +E PN +G ++L+AV+L
Sbjct: 245 TQLEIVEIAENSFTGTLGAWFFLLESIQQVDLANNTLTGIEVLPPNLAG-ENNLVAVELG 304
Query: 308 DNEITGFLPPFLALMPKLSALSLENNNFTGMIPVLYAFKTAKPEPGMSPLVRLLLGGNYL 367
N+I G P A P+LS+LS+ N G+IP Y L RL L GN+L
Sbjct: 305 FNQIRGNAPASFAAYPRLSSLSMRYNVLHGVIPSEY--------ERSKTLRRLYLDGNFL 364
Query: 368 FGPIPEPLRLMKPDSATV-TLAGNCLFRCPTFLFFCQGGEQKSSAECRSA 413
G P R ++ D+ + +L NCL CP C QK C+ A
Sbjct: 365 TG--KPPARFVRTDAEVMGSLGNNCLQGCPGKAKMC-APSQKPFYICKQA 375
BLAST of CmaCh16G006450 vs. TAIR 10
Match:
AT3G59510.1 (Leucine-rich repeat (LRR) family protein )
HSP 1 Score: 193.4 bits (490), Expect = 3.8e-49
Identity = 141/411 (34.31%), Postives = 207/411 (50.36%), Query Frame = 0
Query: 5 LLPLFPLLMALLLP--LQAKTHWEDTQVLKQLKNALDPTSIPSGSCLESWDFSLDPCDNL 64
++ LF LL++L++P + + T D Q L+ + ++DP+SI S L +WDFS DPC+
Sbjct: 19 IMSLFFLLLSLIVPSSVLSATLRSDIQALESIIRSVDPSSISPSSYLSTWDFSEDPCE-- 78
Query: 65 FGHKFTCGFRCD-DVVSGVSRVTDLTLDHAGYSASLSSVFWNLPFLQSLDFSNNFFSGPI 124
G G C + + SRV ++ LD GY LS NL L L + N F GP+
Sbjct: 79 -GSGTFLGVMCSFPLENTTSRVIEIDLDDDGYDGFLSDEVGNLTELTVLSLNKNRFRGPV 138
Query: 125 PNSFSNLTRLRSLSLSSNSFSGEVPPSIGSLSALEELYLNGNGFNGSIPASFVGLVSLKR 184
P S L +L LSL+ N F+G++P I L L+ + L+ N G IP L SL
Sbjct: 139 PESVFQLRKLTKLSLAENFFTGDIPAEITRLKELKTIDLSKNSIAGEIPPRISALRSLTH 198
Query: 185 LELQSNGFTGAFPDLGVLKNLYYLDGTDNGFSGELPAGFPASLVQLLMRNNSFEGVVPSS 244
L L +N G P L L L L+ +N G LP P SL L + NS G + S
Sbjct: 199 LVLSNNHLDGRIPALNGLWKLQVLELGNNHLYGMLPK-LPPSLRTLSLCFNSLAGRI-SP 258
Query: 245 IGDLGNLQVVDLSHNQFSGSVPAALFEHPSLEQLTLSFNQFSAVETPNSSGARSSLIAVD 304
+ L L +D+S N+FSG+V + P + ++ +SFNQF ++E +G+R L +D
Sbjct: 259 LHRLKQLVSLDVSQNRFSGTVGHEILTFPEIARINVSFNQFISIEVIKVTGSR--LRMLD 318
Query: 305 LSDNEITGFLPPFLALMPKLSALSLENNNFTGMIPVLYAFKTAKPEPGMSPLVRLLLGGN 364
N + G LP LA L ++L +N F+G IP +Y + + L L N
Sbjct: 319 AEGNHLQGHLPLNLATYENLKDINLRSNMFSGDIPRIYGKRLE------NSWRSLYLENN 378
Query: 365 YLFGPIPEPLRLMKPDSATVTLAGNCLFRCPTFLFFCQGGEQKSSAECRSA 413
YL G +PE + + L+ NCL +CP + CQ G QK ++C +A
Sbjct: 379 YLSGILPEEFQKI-TKQIRGNLSNNCL-QCPKNVQICQ-GTQKPKSQCTNA 413
BLAST of CmaCh16G006450 vs. TAIR 10
Match:
AT3G11010.1 (receptor like protein 34 )
HSP 1 Score: 177.2 bits (448), Expect = 2.8e-44
Identity = 121/316 (38.29%), Postives = 165/316 (52.22%), Query Frame = 0
Query: 59 CDNLFGHKFTCGFRCDDVVSGVSRVTDLTLDHAGYSASLSSVFWNLPFLQSLDFSNNFFS 118
C +L G F + + + +T L H + ++S NL L SLD S N FS
Sbjct: 41 CSSLHGR-----FHSNSSIRNLHFLTTLDRSHNDFEGQITSSIENLSHLTSLDLSYNRFS 100
Query: 119 GPIPNSFSNLTRLRSLSLSSNSFSGEVPPSIGSLSALEELYLNGNGFNGSIPASFVGLVS 178
G I NS NL+RL SL LS N FSG++P SIG+LS L L L+GN F G IP+S L
Sbjct: 101 GQILNSIGNLSRLTSLDLSFNQFSGQIPSSIGNLSHLTFLGLSGNRFFGQIPSSIGNLSH 160
Query: 179 LKRLELQSNGFTGAFP-DLGVLKNLYYLDGTDNGFSGELPA--GFPASLVQLLMRNNSFE 238
L L L N F G FP +G L NL L + N +SG++P+ G + L+ L + N+F
Sbjct: 161 LTFLGLSGNRFFGQFPSSIGGLSNLTNLHLSYNKYSGQIPSSIGNLSQLIVLYLSVNNFY 220
Query: 239 GVVPSSIGDLGNLQVVDLSHNQFSGSVPAALFEHPSLEQLTLSFNQFSAVETPNSSGARS 298
G +PSS G+L L +D+S N+ G+ P L L ++LS N+F+ PN + + S
Sbjct: 221 GEIPSSFGNLNQLTRLDVSFNKLGGNFPNVLLNLTGLSVVSLSNNKFTGTLPPNIT-SLS 280
Query: 299 SLIAVDLSDNEITGFLPPFLALMPKLSALSLENNNFTGMIPVLYAFKTAKPEPGMSPLVR 358
+L+A SDN TG P FL ++P L+ L L N G L + P S L
Sbjct: 281 NLMAFYASDNAFTGTFPSFLFIIPSLTYLGLSGNQLKG---TLEFGNISSP----SNLQY 340
Query: 359 LLLGGNYLFGPIPEPL 372
L +G N GPIP +
Sbjct: 341 LNIGSNNFIGPIPSSI 343
BLAST of CmaCh16G006450 vs. TAIR 10
Match:
AT3G11080.1 (receptor like protein 35 )
HSP 1 Score: 167.9 bits (424), Expect = 1.7e-41
Identity = 119/325 (36.62%), Postives = 164/325 (50.46%), Query Frame = 0
Query: 50 ESWDFSLDPCDNLFGHKFTCGFRCDDVVSGVSRVTDLTLDHAGYSASLSSVFWNLPFLQS 109
ESW + D C+ TC + +V+ DL+ S +S + L L+
Sbjct: 78 ESWRNNSDCCN---WEGITCDTKSGEVIE-----LDLSCSWLYGSFHSNSSLFRLQNLRV 137
Query: 110 LDFSNNFFSGPIPNSFSNLTRLRSLSLSSNSFSGEVPPSIGSLSALEELYLNGNGFNGSI 169
LD + N G IP+S NL+ L SL LS N F G +P SI +LS L L+L+ N F+G I
Sbjct: 138 LDLTQNDLDGEIPSSIGNLSHLTSLHLSYNQFLGLIPSSIENLSRLTSLHLSSNQFSGQI 197
Query: 170 PASFVGLVSLKRLELQSNGFTGAFP-DLGVLKNLYYLDGTDNGFSGELPA--GFPASLVQ 229
P+S L L LEL SN F+G P +G L NL +L N F G++P+ G A L
Sbjct: 198 PSSIGNLSHLTSLELSSNQFSGQIPSSIGNLSNLTFLSLPSNDFFGQIPSSIGNLARLTY 257
Query: 230 LLMRNNSFEGVVPSSIGDLGNLQVVDLSHNQFSGSVPAALFEHPSLEQLTLSFNQFSAVE 289
L + N+F G +PSS G+L L V+ + N+ SG+VP +L L L LS NQF+
Sbjct: 258 LYLSYNNFVGEIPSSFGNLNQLIVLQVDSNKLSGNVPISLLNLTRLSALLLSHNQFTGT- 317
Query: 290 TPNSSGARSSLIAVDLSDNEITGFLPPFLALMPKLSALSLENNNFTGMIPVLYAFKTAKP 349
PN+ S+L+ + S+N TG LP L +P L L L +N G L+ + P
Sbjct: 318 IPNNISLLSNLMDFEASNNAFTGTLPSSLFNIPPLIRLDLSDNQLNG---TLHFGNISSP 377
Query: 350 EPGMSPLVRLLLGGNYLFGPIPEPL 372
S L L++G N G IP L
Sbjct: 378 ----SNLQYLIIGSNNFIGTIPRSL 386
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SRL2 | 3.9e-43 | 38.29 | Receptor-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=RLP34 PE=2 SV=1 | [more] |
G9LZD7 | 2.8e-41 | 38.51 | Probable inactive leucine-rich repeat receptor kinase XIAO OS=Oryza sativa subsp... | [more] |
Q9SRL7 | 2.4e-40 | 36.62 | Receptor-like protein 35 OS=Arabidopsis thaliana OX=3702 GN=RLP35 PE=3 SV=1 | [more] |
Q9S9U3 | 4.1e-40 | 37.03 | Receptor-like protein 53 OS=Arabidopsis thaliana OX=3702 GN=RLP53 PE=3 SV=1 | [more] |
Q9LJW7 | 2.0e-39 | 38.28 | Receptor-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=RLP43 PE=2 SV=1 | [more] |