Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCACAGGCTTATCGGACCATGGAATGTGTTGATGGAGCTCTCGAGATTCTTCAATTGAGCCCACAACTCTGTTTTCGTGATAATGGCTGTTTTAATCCCCAGAATCTTCCCACCTCCGATGATTTCTTCGTCGACCAACTCCTCGATTTCTCCAATGATGACCAATTTGTTCAAGACCAGACCCCCGACGAGGACGAACACGACCATGACGACTCTGTTTCTCTTTCCGGTCAAGAAATTCATCCGAACTCCATTGTTTCCGATCATCCTTCTTTACCCTCCGGCGAACTTACCGTTCCGGTGTTGTTTTTGTTTCCTTTCCCCTGTTTTTTGAACAGAGTTGCGGGGGTTATTTTAATTTCTGTAACATTGATGAAGGCTTTGCTATTTTTAACAGGTGGATGATTTAGCAGACCTCGAATGGTTATCTCATTTCGTTGAGGATTCTTTCTCTGGATTCTCGGCTTCCTTCCCCTCCGCCGGAATTTCTTCCTTGGTGAAATCGTCAAAGGACTCCGCCGCCGTAGACAAGCAACCGGGCAACGGTGGTTCTATTTCGCCGCCGGAGAACTGTTTCAAAACCCCCATTCCGGTTAAGGCTAGAAGCAAACGAACGAGAACTGGCGGTCGAGTTTGGTGCCTCGCCTCACCGTCGTTGACCGAGTCATCCTCCAGTTCCACAACGTCGTCGTCCTCCTCCTCGTCGCCGGCTAGTCCTTGGCTTATACTTCCCGACCGTTTCGAACCGGAAATTCCAAAGAAGAAACCAAGGAGAAAGTCGTTATCAGAAAAGCCCAAAACCAGCGTCGGAGCTCAGCCTCCTCGGCGGTGCAGCCATTGCGGAGTCCAGAAAACCCCCCAATGGAGAACCGGCCCCCTCGGAGCCAAAACTGTCTGCAACGCTTGCGGCGTCCGATTCAAATCGGGTCGACTATTACCCGAATACCGACCCGCCTGTAGTCCAACTTTCTCCAGCGAATTGCACTCCAACCACCACCGGAAAGTCCTCGAGATGCGCCGTAAAAAGGAAATCGCCGCCCCGGCCGAGTTATTAACCTTAGAACAGAAATAGCATACCGTAGTTGAGGCGGGCCACCGGAGGAGGAGGAAGAGAAGAGTAAAGTTTAGGTAAGGAACCGGATTTATCGAACCCGGTTCAATTAATCCGAGTTAGTATACATTTTCCGCCCTCCTCGGTGCGCCGTAGGTTTGTAGCAATGTACGTACGTAACCGTCTAGAGAAAAAAAAAA
mRNA sequence
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCACAGGCTTATCGGACCATGGAATGTGTTGATGGAGCTCTCGAGATTCTTCAATTGAGCCCACAACTCTGTTTTCGTGATAATGGCTGTTTTAATCCCCAGAATCTTCCCACCTCCGATGATTTCTTCGTCGACCAACTCCTCGATTTCTCCAATGATGACCAATTTGTTCAAGACCAGACCCCCGACGAGGACGAACACGACCATGACGACTCTGTTTCTCTTTCCGGTCAAGAAATTCATCCGAACTCCATTGTTTCCGATCATCCTTCTTTACCCTCCGGCGAACTTACCGTTCCGGTGGATGATTTAGCAGACCTCGAATGGTTATCTCATTTCGTTGAGGATTCTTTCTCTGGATTCTCGGCTTCCTTCCCCTCCGCCGGAATTTCTTCCTTGGTGAAATCGTCAAAGGACTCCGCCGCCGTAGACAAGCAACCGGGCAACGGTGGTTCTATTTCGCCGCCGGAGAACTGTTTCAAAACCCCCATTCCGGTTAAGGCTAGAAGCAAACGAACGAGAACTGGCGGTCGAGTTTGGTGCCTCGCCTCACCGTCGTTGACCGAGTCATCCTCCAGTTCCACAACGTCGTCGTCCTCCTCCTCGTCGCCGGCTAGTCCTTGGCTTATACTTCCCGACCGTTTCGAACCGGAAATTCCAAAGAAGAAACCAAGGAGAAAGTCGTTATCAGAAAAGCCCAAAACCAGCGTCGGAGCTCAGCCTCCTCGGCGGTGCAGCCATTGCGGAGTCCAGAAAACCCCCCAATGGAGAACCGGCCCCCTCGGAGCCAAAACTGTCTGCAACGCTTGCGGCGTCCGATTCAAATCGGGTCGACTATTACCCGAATACCGACCCGCCTGTAGTCCAACTTTCTCCAGCGAATTGCACTCCAACCACCACCGGAAAGTCCTCGAGATGCGCCGTAAAAAGGAAATCGCCGCCCCGGCCGAGTTATTAACCTTAGAACAGAAATAGCATACCGTAGTTGAGGCGGGCCACCGGAGGAGGAGGAAGAGAAGAGTAAAGTTTAGGTAAGGAACCGGATTTATCGAACCCGGTTCAATTAATCCGAGTTAGTATACATTTTCCGCCCTCCTCGGTGCGCCGTAGGTTTGTAGCAATGTACGTACGTAACCGTCTAGAGAAAAAAAAAA
Coding sequence (CDS)
ATGGAATGTGTTGATGGAGCTCTCGAGATTCTTCAATTGAGCCCACAACTCTGTTTTCGTGATAATGGCTGTTTTAATCCCCAGAATCTTCCCACCTCCGATGATTTCTTCGTCGACCAACTCCTCGATTTCTCCAATGATGACCAATTTGTTCAAGACCAGACCCCCGACGAGGACGAACACGACCATGACGACTCTGTTTCTCTTTCCGGTCAAGAAATTCATCCGAACTCCATTGTTTCCGATCATCCTTCTTTACCCTCCGGCGAACTTACCGTTCCGGTGGATGATTTAGCAGACCTCGAATGGTTATCTCATTTCGTTGAGGATTCTTTCTCTGGATTCTCGGCTTCCTTCCCCTCCGCCGGAATTTCTTCCTTGGTGAAATCGTCAAAGGACTCCGCCGCCGTAGACAAGCAACCGGGCAACGGTGGTTCTATTTCGCCGCCGGAGAACTGTTTCAAAACCCCCATTCCGGTTAAGGCTAGAAGCAAACGAACGAGAACTGGCGGTCGAGTTTGGTGCCTCGCCTCACCGTCGTTGACCGAGTCATCCTCCAGTTCCACAACGTCGTCGTCCTCCTCCTCGTCGCCGGCTAGTCCTTGGCTTATACTTCCCGACCGTTTCGAACCGGAAATTCCAAAGAAGAAACCAAGGAGAAAGTCGTTATCAGAAAAGCCCAAAACCAGCGTCGGAGCTCAGCCTCCTCGGCGGTGCAGCCATTGCGGAGTCCAGAAAACCCCCCAATGGAGAACCGGCCCCCTCGGAGCCAAAACTGTCTGCAACGCTTGCGGCGTCCGATTCAAATCGGGTCGACTATTACCCGAATACCGACCCGCCTGTAGTCCAACTTTCTCCAGCGAATTGCACTCCAACCACCACCGGAAAGTCCTCGAGATGCGCCGTAAAAAGGAAATCGCCGCCCCGGCCGAGTTATTAACCTTAGAACAGAAATAG
Protein sequence
MECVDGALEILQLSPQLCFRDNGCFNPQNLPTSDDFFVDQLLDFSNDDQFVQDQTPDEDEHDHDDSVSLSGQEIHPNSIVSDHPSLPSGELTVPVDDLADLEWLSHFVEDSFSGFSASFPSAGISSLVKSSKDSAAVDKQPGNGGSISPPENCFKTPIPVKARSKRTRTGGRVWCLASPSLTESSSSSTTSSSSSSSPASPWLILPDRFEPEIPKKKPRRKSLSEKPKTSVGAQPPRRCSHCGVQKTPQWRTGPLGAKTVCNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKEIAAPAELLTLEQK
Homology
BLAST of CmaCh16G006440 vs. ExPASy Swiss-Prot
Match:
Q9FH57 (GATA transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=GATA5 PE=2 SV=1)
HSP 1 Score: 246.9 bits (629), Expect = 3.1e-64
Identity = 150/292 (51.37%), Postives = 187/292 (64.04%), Query Frame = 0
Query: 28 QNLPTSDDFFVDQLLDFSNDDQFVQDQTPDEDEHD----HDDSVSLSGQEIHPNSIVS-- 87
QN + DDF VD LLD SNDD F ++T + +H+ + + G + +S S
Sbjct: 33 QNGFSVDDFSVDDLLDLSNDDVFADEETDLKAQHEMVRVSSEEPNDDGDALRRSSDFSGC 92
Query: 88 -DHPSLPSGELTVPVDDLADLEWLSHFVEDSFSGFSASFPSAGISSLVKSSKDSAAVDKQ 147
D SLP+ EL++P DDLA+LEWLSHFVEDSF+ +S G + ++ A +
Sbjct: 93 DDFGSLPTSELSLPADDLANLEWLSHFVEDSFTEYS------GPNLTGTPTEKPAWLTGD 152
Query: 148 PGNGGSISPPENCFKTPIPVKARSKRTRTGGRVWCLASPSLTESSSSSTTSSSSSSSPAS 207
+ + E CFK+P+P KARSKR R G +VW L S S + SSS +T SSSSS P+S
Sbjct: 153 RKHPVTAVTEETCFKSPVPAKARSKRNRNGLKVWSLGSSSSSGPSSSGST-SSSSSGPSS 212
Query: 208 PWLILPDRFEPEI-------PKKKPRRKSLSEKPKTSVGAQPPRRCSHCGVQKTPQWRTG 267
PW + EP + PKK +R + S QP R+CSHCGVQKTPQWR G
Sbjct: 213 PWFSGAELLEPVVTSERPPFPKKHKKRSAESVFSGELQQLQPQRKCSHCGVQKTPQWRAG 272
Query: 268 PLGAKTVCNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKE 306
P+GAKT+CNACGVR+KSGRLLPEYRPACSPTFSSELHSNHHRKV+EMRRKKE
Sbjct: 273 PMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVIEMRRKKE 317
BLAST of CmaCh16G006440 vs. ExPASy Swiss-Prot
Match:
Q9SD38 (GATA transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=GATA6 PE=2 SV=1)
HSP 1 Score: 216.9 bits (551), Expect = 3.4e-55
Identity = 146/289 (50.52%), Postives = 180/289 (62.28%), Query Frame = 0
Query: 34 DDFFVDQLLDFSNDDQFVQDQTPDEDEHDHDDSVSLSGQE-IHPNSIVSDHPSLPSGELT 93
DDF VD LLDFS +++ DE E +S + +H ++ S SG L+
Sbjct: 26 DDFSVDDLLDFSKEEEDDDVLVEDEAELKVQRKRGVSDENTLHRSNDFSTADFHTSG-LS 85
Query: 94 VPVDDLADLEWLSHFVED-SFSGFSASFPSAGISSLVKSSKDSAAVDKQPGNGGSISPPE 153
VP+DD+A+LEWLS+FV+D SF+ +SA P+ L + + K+ E
Sbjct: 86 VPMDDIAELEWLSNFVDDSSFTPYSA--PTNKPVWLTGNRRHLVQPVKE----------E 145
Query: 154 NCFKTPIP-VKARSKRTRTGGRVWCLASPSLTESSSSSTTSSSSSSSPASP-WLILPDRF 213
CFK+ P VK R KR RTG RVW S SLT+SSSSSTTSSSSS P+SP WL
Sbjct: 146 TCFKSQHPAVKTRPKRARTGVRVWSHGSQSLTDSSSSSTTSSSSSPRPSSPLWLASGQFL 205
Query: 214 EPEIPKKKPRRKSLSEKPKTSVGAQ-PPRRCSHCGVQKTPQWRTGPLGAKTVCNACGVRF 273
+ + K + ++K +T Q R+C HCGVQKTPQWR GPLGAKT+CNACGVR+
Sbjct: 206 DEPMTKTQKKKKVWKNAGQTQTQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVRY 265
Query: 274 KSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKEIAAPAELLTLEQ 318
KSGRLLPEYRPACSPTFSSELHSNHH KV+EMRRKKE + AE L Q
Sbjct: 266 KSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRKKETSDGAEETGLNQ 301
BLAST of CmaCh16G006440 vs. ExPASy Swiss-Prot
Match:
O65515 (GATA transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=GATA7 PE=2 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 2.5e-42
Identity = 123/282 (43.62%), Postives = 152/282 (53.90%), Query Frame = 0
Query: 35 DFFVDQLLDFSNDDQFVQDQTPD--EDEHDHDDSVSLSGQEIHPNSIVSDHPSLPSGELT 94
DF VD LLD SN D ++ + EDE + + S S Q ++ +S L S
Sbjct: 10 DFSVDDLLDLSNADTSLESSSSQRKEDEQEREKFKSFSDQ----STRLSPPEDLLSFPGD 69
Query: 95 VPVDDLADLEWLSHFVEDSFSG--FSASFPSAGISSLVKSSKDSAAVDKQPGNGGSISPP 154
PV DL DLEWLS+FVEDSFS S+ FP ++ S+
Sbjct: 70 APVGDLEDLEWLSNFVEDSFSESYISSDFPVNPVA--------------------SVEVR 129
Query: 155 ENCFKTPIPVKARSKRTRTGGRVWCLASPSLTESSSSSTTSSSSSSSPASPWLILPDRFE 214
C +PVK RSKR RT GR+W + SPS S++ +
Sbjct: 130 RQC----VPVKPRSKRRRTNGRIWSMESPSPLLSTAVARR-------------------- 189
Query: 215 PEIPKKKPRRKSLSEKPKTSVGAQPPRRCSHCGVQKTPQWRTGPLGAKTVCNACGVRFKS 274
KK+ R+K + Q R CSHCGVQKTPQWR GPLGAKT+CNACGVRFKS
Sbjct: 190 ----KKRGRQKVDASYGGVVQQQQLRRCCSHCGVQKTPQWRMGPLGAKTLCNACGVRFKS 238
Query: 275 GRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKEIAAPAEL 313
GRLLPEYRPACSPTF++E+HSN HRKVLE+R K +A PA +
Sbjct: 250 GRLLPEYRPACSPTFTNEIHSNSHRKVLELRLMK-VADPARV 238
BLAST of CmaCh16G006440 vs. ExPASy Swiss-Prot
Match:
P69781 (GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1)
HSP 1 Score: 155.2 bits (391), Expect = 1.2e-36
Identity = 123/287 (42.86%), Postives = 155/287 (54.01%), Query Frame = 0
Query: 33 SDDFFVDQLL-DFSNDDQFVQDQTPDEDEHDH-DDSVSLSGQEIHP-NSIVSDHPSLPSG 92
+ DF VD LL DFSNDD D D DS + S ++ + V D S SG
Sbjct: 11 TSDFAVDDLLVDFSNDDDEENDVVADSTTTTTITDSSNFSAADLPSFHGDVQDGTSF-SG 70
Query: 93 ELTVPVDDLAD-LEWLSHFVEDSFSGFSASFPSAGISSLVKSSKDSAAVDKQPGNGGSIS 152
+L +P DDLAD LEWLS+ V++S S + S KS D + P N S S
Sbjct: 71 DLCIPSDDLADELEWLSNIVDESLS--PEDVHKLELISGFKSRPDPKSDTGSPENPNSSS 130
Query: 153 PPENCFKT--PIPVKARSKRTRTGGRVWC---LASPSLTESSSSSTTSSSSS---SSPAS 212
P F T +P KARSKR+R W L + +S + T SS S P S
Sbjct: 131 P---IFTTDVSVPAKARSKRSRAAACNWASRGLLKETFYDSPFTGETILSSQQHLSPPTS 190
Query: 213 PWLILPDRFEPEIPKKKPRRKSLSEKPKTSVGAQPPRRCSHCGVQKTPQWRTGPLGAKTV 272
P L++ + + RRK P++ G RRC HC KTPQWRTGP+G KT+
Sbjct: 191 PPLLMAPLGKKQAVDGGHRRKKDVSSPES--GGAEERRCLHCATDKTPQWRTGPMGPKTL 250
Query: 273 CNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKEIA 308
CNACGVR+KSGRL+PEYRPA SPTF HSN HRKV+E+RR+KE++
Sbjct: 251 CNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHRKVMELRRQKEMS 289
BLAST of CmaCh16G006440 vs. ExPASy Swiss-Prot
Match:
O82632 (GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1)
HSP 1 Score: 152.9 bits (385), Expect = 6.0e-36
Identity = 117/288 (40.62%), Postives = 152/288 (52.78%), Query Frame = 0
Query: 34 DDFFVDQLLDFSNDDQFVQDQTPDEDEHDHDDSVSLSGQEIHPNSIVSDHPSLPSG--EL 93
D F VD LLDFSNDD V D+ + DS +LS + +S S + +G +L
Sbjct: 16 DSFVVDDLLDFSNDDGEV-----DDGLNTLPDSSTLSTGTLTDSSNSSSLFTDGTGFSDL 75
Query: 94 TVPVDDLADLEWLSHFVEDSFSG--------FSA-SFPSAGISSLVKSSKDSAAVDKQPG 153
+P DD+A+LEWLS+FVE+SF+G FS P S+L K +D Q
Sbjct: 76 YIPNDDIAELEWLSNFVEESFAGEDQDKLHLFSGLKNPQTTGSTLTHLIKPEPELDHQ-- 135
Query: 154 NGGSISPPENCFKTPIPVKARSKRTRTGGRVWCLASPSLTESSSSSTTSSSSSSSPASPW 213
I E+ +P KARSKR+R+ W SL +S ++
Sbjct: 136 ---FIDIDES--NVAVPAKARSKRSRSAASTWASRLLSLADSDETN-------------- 195
Query: 214 LILPDRFEPEIPKKKPRR---KSLSEKPKTSVG-AQPPRRCSHCGVQKTPQWRTGPLGAK 273
PKKK RR + + G + RRC HC +KTPQWRTGP+G K
Sbjct: 196 -----------PKKKQRRVKEQDFAGDMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPK 255
Query: 274 TVCNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKEI 307
T+CNACGVR+KSGRL+PEYRPA SPTF HSN HRKV+E+RR+KE+
Sbjct: 256 TLCNACGVRYKSGRLVPEYRPASSPTFVMARHSNSHRKVMELRRQKEM 266
BLAST of CmaCh16G006440 vs. TAIR 10
Match:
AT5G66320.1 (GATA transcription factor 5 )
HSP 1 Score: 246.9 bits (629), Expect = 2.2e-65
Identity = 150/292 (51.37%), Postives = 187/292 (64.04%), Query Frame = 0
Query: 28 QNLPTSDDFFVDQLLDFSNDDQFVQDQTPDEDEHD----HDDSVSLSGQEIHPNSIVS-- 87
QN + DDF VD LLD SNDD F ++T + +H+ + + G + +S S
Sbjct: 33 QNGFSVDDFSVDDLLDLSNDDVFADEETDLKAQHEMVRVSSEEPNDDGDALRRSSDFSGC 92
Query: 88 -DHPSLPSGELTVPVDDLADLEWLSHFVEDSFSGFSASFPSAGISSLVKSSKDSAAVDKQ 147
D SLP+ EL++P DDLA+LEWLSHFVEDSF+ +S G + ++ A +
Sbjct: 93 DDFGSLPTSELSLPADDLANLEWLSHFVEDSFTEYS------GPNLTGTPTEKPAWLTGD 152
Query: 148 PGNGGSISPPENCFKTPIPVKARSKRTRTGGRVWCLASPSLTESSSSSTTSSSSSSSPAS 207
+ + E CFK+P+P KARSKR R G +VW L S S + SSS +T SSSSS P+S
Sbjct: 153 RKHPVTAVTEETCFKSPVPAKARSKRNRNGLKVWSLGSSSSSGPSSSGST-SSSSSGPSS 212
Query: 208 PWLILPDRFEPEI-------PKKKPRRKSLSEKPKTSVGAQPPRRCSHCGVQKTPQWRTG 267
PW + EP + PKK +R + S QP R+CSHCGVQKTPQWR G
Sbjct: 213 PWFSGAELLEPVVTSERPPFPKKHKKRSAESVFSGELQQLQPQRKCSHCGVQKTPQWRAG 272
Query: 268 PLGAKTVCNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKE 306
P+GAKT+CNACGVR+KSGRLLPEYRPACSPTFSSELHSNHHRKV+EMRRKKE
Sbjct: 273 PMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVIEMRRKKE 317
BLAST of CmaCh16G006440 vs. TAIR 10
Match:
AT5G66320.2 (GATA transcription factor 5 )
HSP 1 Score: 246.9 bits (629), Expect = 2.2e-65
Identity = 150/292 (51.37%), Postives = 187/292 (64.04%), Query Frame = 0
Query: 28 QNLPTSDDFFVDQLLDFSNDDQFVQDQTPDEDEHD----HDDSVSLSGQEIHPNSIVS-- 87
QN + DDF VD LLD SNDD F ++T + +H+ + + G + +S S
Sbjct: 33 QNGFSVDDFSVDDLLDLSNDDVFADEETDLKAQHEMVRVSSEEPNDDGDALRRSSDFSGC 92
Query: 88 -DHPSLPSGELTVPVDDLADLEWLSHFVEDSFSGFSASFPSAGISSLVKSSKDSAAVDKQ 147
D SLP+ EL++P DDLA+LEWLSHFVEDSF+ +S G + ++ A +
Sbjct: 93 DDFGSLPTSELSLPADDLANLEWLSHFVEDSFTEYS------GPNLTGTPTEKPAWLTGD 152
Query: 148 PGNGGSISPPENCFKTPIPVKARSKRTRTGGRVWCLASPSLTESSSSSTTSSSSSSSPAS 207
+ + E CFK+P+P KARSKR R G +VW L S S + SSS +T SSSSS P+S
Sbjct: 153 RKHPVTAVTEETCFKSPVPAKARSKRNRNGLKVWSLGSSSSSGPSSSGST-SSSSSGPSS 212
Query: 208 PWLILPDRFEPEI-------PKKKPRRKSLSEKPKTSVGAQPPRRCSHCGVQKTPQWRTG 267
PW + EP + PKK +R + S QP R+CSHCGVQKTPQWR G
Sbjct: 213 PWFSGAELLEPVVTSERPPFPKKHKKRSAESVFSGELQQLQPQRKCSHCGVQKTPQWRAG 272
Query: 268 PLGAKTVCNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKE 306
P+GAKT+CNACGVR+KSGRLLPEYRPACSPTFSSELHSNHHRKV+EMRRKKE
Sbjct: 273 PMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVIEMRRKKE 317
BLAST of CmaCh16G006440 vs. TAIR 10
Match:
AT3G51080.1 (GATA transcription factor 6 )
HSP 1 Score: 216.9 bits (551), Expect = 2.4e-56
Identity = 146/289 (50.52%), Postives = 180/289 (62.28%), Query Frame = 0
Query: 34 DDFFVDQLLDFSNDDQFVQDQTPDEDEHDHDDSVSLSGQE-IHPNSIVSDHPSLPSGELT 93
DDF VD LLDFS +++ DE E +S + +H ++ S SG L+
Sbjct: 26 DDFSVDDLLDFSKEEEDDDVLVEDEAELKVQRKRGVSDENTLHRSNDFSTADFHTSG-LS 85
Query: 94 VPVDDLADLEWLSHFVED-SFSGFSASFPSAGISSLVKSSKDSAAVDKQPGNGGSISPPE 153
VP+DD+A+LEWLS+FV+D SF+ +SA P+ L + + K+ E
Sbjct: 86 VPMDDIAELEWLSNFVDDSSFTPYSA--PTNKPVWLTGNRRHLVQPVKE----------E 145
Query: 154 NCFKTPIP-VKARSKRTRTGGRVWCLASPSLTESSSSSTTSSSSSSSPASP-WLILPDRF 213
CFK+ P VK R KR RTG RVW S SLT+SSSSSTTSSSSS P+SP WL
Sbjct: 146 TCFKSQHPAVKTRPKRARTGVRVWSHGSQSLTDSSSSSTTSSSSSPRPSSPLWLASGQFL 205
Query: 214 EPEIPKKKPRRKSLSEKPKTSVGAQ-PPRRCSHCGVQKTPQWRTGPLGAKTVCNACGVRF 273
+ + K + ++K +T Q R+C HCGVQKTPQWR GPLGAKT+CNACGVR+
Sbjct: 206 DEPMTKTQKKKKVWKNAGQTQTQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVRY 265
Query: 274 KSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKEIAAPAELLTLEQ 318
KSGRLLPEYRPACSPTFSSELHSNHH KV+EMRRKKE + AE L Q
Sbjct: 266 KSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRKKETSDGAEETGLNQ 301
BLAST of CmaCh16G006440 vs. TAIR 10
Match:
AT4G36240.1 (GATA transcription factor 7 )
HSP 1 Score: 174.1 bits (440), Expect = 1.8e-43
Identity = 123/282 (43.62%), Postives = 152/282 (53.90%), Query Frame = 0
Query: 35 DFFVDQLLDFSNDDQFVQDQTPD--EDEHDHDDSVSLSGQEIHPNSIVSDHPSLPSGELT 94
DF VD LLD SN D ++ + EDE + + S S Q ++ +S L S
Sbjct: 10 DFSVDDLLDLSNADTSLESSSSQRKEDEQEREKFKSFSDQ----STRLSPPEDLLSFPGD 69
Query: 95 VPVDDLADLEWLSHFVEDSFSG--FSASFPSAGISSLVKSSKDSAAVDKQPGNGGSISPP 154
PV DL DLEWLS+FVEDSFS S+ FP ++ S+
Sbjct: 70 APVGDLEDLEWLSNFVEDSFSESYISSDFPVNPVA--------------------SVEVR 129
Query: 155 ENCFKTPIPVKARSKRTRTGGRVWCLASPSLTESSSSSTTSSSSSSSPASPWLILPDRFE 214
C +PVK RSKR RT GR+W + SPS S++ +
Sbjct: 130 RQC----VPVKPRSKRRRTNGRIWSMESPSPLLSTAVARR-------------------- 189
Query: 215 PEIPKKKPRRKSLSEKPKTSVGAQPPRRCSHCGVQKTPQWRTGPLGAKTVCNACGVRFKS 274
KK+ R+K + Q R CSHCGVQKTPQWR GPLGAKT+CNACGVRFKS
Sbjct: 190 ----KKRGRQKVDASYGGVVQQQQLRRCCSHCGVQKTPQWRMGPLGAKTLCNACGVRFKS 238
Query: 275 GRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKEIAAPAEL 313
GRLLPEYRPACSPTF++E+HSN HRKVLE+R K +A PA +
Sbjct: 250 GRLLPEYRPACSPTFTNEIHSNSHRKVLELRLMK-VADPARV 238
BLAST of CmaCh16G006440 vs. TAIR 10
Match:
AT5G25830.1 (GATA transcription factor 12 )
HSP 1 Score: 155.2 bits (391), Expect = 8.7e-38
Identity = 123/287 (42.86%), Postives = 155/287 (54.01%), Query Frame = 0
Query: 33 SDDFFVDQLL-DFSNDDQFVQDQTPDEDEHDH-DDSVSLSGQEIHP-NSIVSDHPSLPSG 92
+ DF VD LL DFSNDD D D DS + S ++ + V D S SG
Sbjct: 11 TSDFAVDDLLVDFSNDDDEENDVVADSTTTTTITDSSNFSAADLPSFHGDVQDGTSF-SG 70
Query: 93 ELTVPVDDLAD-LEWLSHFVEDSFSGFSASFPSAGISSLVKSSKDSAAVDKQPGNGGSIS 152
+L +P DDLAD LEWLS+ V++S S + S KS D + P N S S
Sbjct: 71 DLCIPSDDLADELEWLSNIVDESLS--PEDVHKLELISGFKSRPDPKSDTGSPENPNSSS 130
Query: 153 PPENCFKT--PIPVKARSKRTRTGGRVWC---LASPSLTESSSSSTTSSSSS---SSPAS 212
P F T +P KARSKR+R W L + +S + T SS S P S
Sbjct: 131 P---IFTTDVSVPAKARSKRSRAAACNWASRGLLKETFYDSPFTGETILSSQQHLSPPTS 190
Query: 213 PWLILPDRFEPEIPKKKPRRKSLSEKPKTSVGAQPPRRCSHCGVQKTPQWRTGPLGAKTV 272
P L++ + + RRK P++ G RRC HC KTPQWRTGP+G KT+
Sbjct: 191 PPLLMAPLGKKQAVDGGHRRKKDVSSPES--GGAEERRCLHCATDKTPQWRTGPMGPKTL 250
Query: 273 CNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKEIA 308
CNACGVR+KSGRL+PEYRPA SPTF HSN HRKV+E+RR+KE++
Sbjct: 251 CNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHRKVMELRRQKEMS 289
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FH57 | 3.1e-64 | 51.37 | GATA transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=GATA5 PE=2 SV=1 | [more] |
Q9SD38 | 3.4e-55 | 50.52 | GATA transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=GATA6 PE=2 SV=1 | [more] |
O65515 | 2.5e-42 | 43.62 | GATA transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=GATA7 PE=2 SV=1 | [more] |
P69781 | 1.2e-36 | 42.86 | GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1 | [more] |
O82632 | 6.0e-36 | 40.63 | GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1 | [more] |