CmaCh16G006040 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGCAAAAAGGTAACAACTTATAGCATATAACTATCGAGCAAGGAAAAGTTGACAATGACATAGATGAATAAGATATACCAATCCAAACTAAGAATTATTTATTTATTTTTTATCCATTCGGGAAGTAAAGATTATAGCATTTGAACTAAAAGTTATAAAAAGAAAGGAAATAAAATGAATTAAATAGTCTAAGACCTTAGGGTGGGGAAAAAAATATGCATGAAAACAGTTGGAGAAGCAAATAAAATAAATGTGAGTTTCCGCGTAAGAACATGAATGAACATGAAAGAACAAATCCAGAACAAATCCAGCCATCCATCGCCACTACAAAACACCAACATAATTTTACTCCAATCCCAATCCCACTCTTTGTTCTTCCTTTCTTCTTTTCGCATCTTTCTCTTTGTTTCCACTATCATAATCCTTATCTTCTACCTCTATAAATCCATCGCCATTCATTTTCTTAACGAAAAGGGGTAGAAACAACCTTCTCCACCGACACCCATTTTCCCGATTCCCCTTCCCTCCGATTTATACCCCAAAAAAGGCCTTCAATCTCACAGAACAGAGAAGAACAGAGCAGAACAGAGTAGAACAGAGCTTCTCTGTGTTTATCGGAATGGGGAACTGCTTATTCGGCGGTGGGTCTGGTGAGATTCAGGGGAAAATCAAGGTAATCACGTCCAACGGTGGGATTATGGAGTTGGGTTCTCCGATTACCGTCGGGTGCATCGCCGACGAGTTTCCGGGATATGGAATATTCAAAAGCCACGATCTTTTTTGGAACCCATTACCGCACAACGAGGAGCTGCTTCCGGGGAAATCCTACTACTTGCTTCAGAGAAACAGGGGAAGAAACAGAGGAGAGACAGAAGAAGGGGAAATGGGAATGATAAGGGCGCGTGAGGGGCACGTGAGGTCGAATAGTGTACCGGAGGCGACGGCGGCGGCGGCGGGTATGGCGTCGTATAGAATGTCGTTTGATTATCAGGGGGTTTTGAGGAGGTCGCAGACGGAGGTTTTTTCGAGGAGCAGTGAGAAGAACGGCGGGGTTTGGAAGGTGAAATTGGTGATTAGTCCAAAGCGATTAGTGGAGATTTTGGAGGAGGAAGGTCACACTCAGGAGTTGATTGAGAGCGTAAGGACTGTGGCTAAATGTGGAAGTACCAGCACGAGCAGTAGCTTTTCGTCGTCCATGGCGTTTTCCGATCACTGGAGTTTGTCCTCCACCACCGCCAATGCTACTCCGAGCGCTTCCGCCAAAAGTGGCGGCTTGCTGGAGATCTAA ATGCAAGCAAAAAGGGGTAGAAACAACCTTCTCCACCGACACCCATTTTCCCGATTCCCCTTCCCTCCGATTTATACCCCAAAAAAGGCCTTCAATCTCACAGAACAGAGAAGAACAGAGCAGAACAGAGTAGAACAGAGCTTCTCTGTGTTTATCGGAATGGGGAACTGCTTATTCGGCGGTGGGTCTGGTGAGATTCAGGGGAAAATCAAGGTAATCACGTCCAACGGTGGGATTATGGAGTTGGGTTCTCCGATTACCGTCGGGTGCATCGCCGACGAGTTTCCGGGATATGGAATATTCAAAAGCCACGATCTTTTTTGGAACCCATTACCGCACAACGAGGAGCTGCTTCCGGGGAAATCCTACTACTTGCTTCAGAGAAACAGGGGAAGAAACAGAGGAGAGACAGAAGAAGGGGAAATGGGAATGATAAGGGCGCGTGAGGGGCACGTGAGGTCGAATAGTGTACCGGAGGCGACGGCGGCGGCGGCGGGTATGGCGTCGTATAGAATGTCGTTTGATTATCAGGGGGTTTTGAGGAGGTCGCAGACGGAGGTTTTTTCGAGGAGCAGTGAGAAGAACGGCGGGGTTTGGAAGGTGAAATTGGTGATTAGTCCAAAGCGATTAGTGGAGATTTTGGAGGAGGAAGGTCACACTCAGGAGTTGATTGAGAGCGTAAGGACTGTGGCTAAATGTGGAAGTACCAGCACGAGCAGTAGCTTTTCGTCGTCCATGGCGTTTTCCGATCACTGGAGTTTGTCCTCCACCACCGCCAATGCTACTCCGAGCGCTTCCGCCAAAAGTGGCGGCTTGCTGGAGATCTAA ATGCAAGCAAAAAGGGGTAGAAACAACCTTCTCCACCGACACCCATTTTCCCGATTCCCCTTCCCTCCGATTTATACCCCAAAAAAGGCCTTCAATCTCACAGAACAGAGAAGAACAGAGCAGAACAGAGTAGAACAGAGCTTCTCTGTGTTTATCGGAATGGGGAACTGCTTATTCGGCGGTGGGTCTGGTGAGATTCAGGGGAAAATCAAGGTAATCACGTCCAACGGTGGGATTATGGAGTTGGGTTCTCCGATTACCGTCGGGTGCATCGCCGACGAGTTTCCGGGATATGGAATATTCAAAAGCCACGATCTTTTTTGGAACCCATTACCGCACAACGAGGAGCTGCTTCCGGGGAAATCCTACTACTTGCTTCAGAGAAACAGGGGAAGAAACAGAGGAGAGACAGAAGAAGGGGAAATGGGAATGATAAGGGCGCGTGAGGGGCACGTGAGGTCGAATAGTGTACCGGAGGCGACGGCGGCGGCGGCGGGTATGGCGTCGTATAGAATGTCGTTTGATTATCAGGGGGTTTTGAGGAGGTCGCAGACGGAGGTTTTTTCGAGGAGCAGTGAGAAGAACGGCGGGGTTTGGAAGGTGAAATTGGTGATTAGTCCAAAGCGATTAGTGGAGATTTTGGAGGAGGAAGGTCACACTCAGGAGTTGATTGAGAGCGTAAGGACTGTGGCTAAATGTGGAAGTACCAGCACGAGCAGTAGCTTTTCGTCGTCCATGGCGTTTTCCGATCACTGGAGTTTGTCCTCCACCACCGCCAATGCTACTCCGAGCGCTTCCGCCAAAAGTGGCGGCTTGCTGGAGATCTAA MQAKRGRNNLLHRHPFSRFPFPPIYTPKKAFNLTEQRRTEQNRVEQSFSVFIGMGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVRSNSVPEATAAAAGMASYRMSFDYQGVLRRSQTEVFSRSSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDHWSLSSTTANATPSASAKSGGLLEI Homology
BLAST of CmaCh16G006040 vs. TAIR 10
Match: AT1G64700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 135.2 bits (339), Expect = 8.0e-32 Identity = 91/209 (43.54%), Postives = 120/209 (57.42%), Query Frame = 0
BLAST of CmaCh16G006040 vs. TAIR 10
Match: AT3G61920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, hypocotyl, root, egg cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 105.9 bits (263), Expect = 5.2e-23 Identity = 84/214 (39.25%), Postives = 109/214 (50.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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