CmaCh16G006020 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTTAGAACTTGCAGACTTAGCTTCAAACCAAAACCCTCAGGCCCTAACCATCTTCATCCAAGAGCCCCTAATTGGTGTTCGTTTCGTTGAGTCGCCCCCAACTTCAATCATTTATAATCCGATCAAGTTCCGGCCGTCGTGTATTTGACTGTCCCACGCCACTGCCACCCCTTTTGTCTTGGTTCCATCTTCATCGCTGCTATCTTCGTCTTCATAATGGGTTGCAGGAAGAAAGGAGTCCCAGATTCCCAAAACGAGGTAGAGCCTTTTGAATTTTCATAGCAAAGGGTTAATCTATCTTTTGCGTTAATCTTGGAGGTTTCTGTTTGTTTCGTATGTATTTTTTAACAAGAAAGAAGAGTTCCGTGCGAATTTGCTTTGATTTTAAAGTGGGTTTGTGTTCATGGGGAGATGGCATGTTTCATCTAATGCTTCCATTTTAGATTGCAATAAAGATGTAGATCCTAATCCTAGTAATGGCTGTTGCATTGCTTCGGATTGTTTGGTAGAGGGGACTTATGCAAATGTTGATTATGATGATTGCAAGGCGAGAATTAGATGCTATTTTGAGAAAATTCTTTGGGTTTTTTTAAAGGAAATTGGTCGTAGAGGATTTGTTAGGCCACTGCCTGCGTTAATAGGTGAAGGGGGAGCTTTGGATTTGTTTGAATTGTTCTTGGTAGTAAGAGATAAAGGAGGTTCTCAAGTGGTTTCAGAGAAGAAACTATGGTCTTCAGTGGTTGTGGAATTAGGTTTGGATCTTGGGCTTTCGGCTTCGGTGAAATTGATTTATTCCAAGTACTTAAGTGATCTAGAGAAATGGCTTATGGTGAGATGTGGAGACACAAAACTGGAAAATGGGAGCTCTGATTATTGCTACAAGAAAAGTTCTCCATTTTTGTCGGAACTCGGGGCAAAGATTAACGGTATGTTGTATGGTGTGCCGAGACAAAATAGCATATATGATGAATGTTTTGGATTCAAATCTAACAAACAGAATGGGAACGTTAATGTTGCTGCCGCTGCAGTGGAGAAGGAAATAAAATTCTCTGAAATAAAGAAGAAAGAACACGATCTCCATGGGGATGTTACACCAATTCAACAAGATTGTACAGAGACGCATCCAATCCATGTTATTGAAGATGGTCAAAGTTTGGATGCTGTTAATGTTGAAGCTGAAATAGAATCTCTTGGGAAATATCGAGAATCGTTATTACGAATGCTGAAGTGGGTGAGAAAGACTGCGAAGCATCCTGAAGATCCATTAAATGGTACAATACTGGGGGCATCAAGGTGGAAAGGTTACTCGAGCGATGATGCATTATGGCTTCAAGTAATCAGTGCAAAGGATGCTCTTCTAATTAGGAAGGGTGTTGACAAAATCGCTGAGAAACGTCTTTTAATACAGGTAGATTTCACCCACTTATTCTGATTGTAAGCCAGTTCTCTCTCTCTCTCCCCCTTCCCCTTTTTTCCTTGACCGATCGACATACTTGCTTTCTTGCTTTGGACTGCAATTATGCGCAAACTGACGTGTGCAGGTATTACGATCTTTGGCTTTCTTTTTCAGGATAGAGTCTTCTGA TCTTAGAACTTGCAGACTTAGCTTCAAACCAAAACCCTCAGGCCCTAACCATCTTCATCCAAGAGCCCCTAATTGGTGTTCGTTTCGTTGAGTCGCCCCCAACTTCAATCATTTATAATCCGATCAAGTTCCGGCCGTCGTGTATTTGACTGTCCCACGCCACTGCCACCCCTTTTGTCTTGGTTCCATCTTCATCGCTGCTATCTTCGTCTTCATAATGGGTTGCAGGAAGAAAGGAGTCCCAGATTCCCAAAACGAGGTAGAGCCTTTTGAATTTTCATAGCAAAGGGTTAATCTATCTTTTGCGTTAATCTTGGAGGTTTCTGTTTGTTTCGTATGTATTTTTTAACAAGAAAGAAGAGTTCCGTGCGAATTTGCTTTGATTTTAAAGTGGGTTTGTGTTCATGGGGAGATGGCATGTTTCATCTAATGCTTCCATTTTAGATTGCAATAAAGATGTAGATCCTAATCCTAGTAATGGCTGTTGCATTGCTTCGGATTGTTTGGTAGAGGGGACTTATGCAAATGTTGATTATGATGATTGCAAGGCGAGAATTAGATGCTATTTTGAGAAAATTCTTTGGGTTTTTTTAAAGGAAATTGGTCGTAGAGGATTTGTTAGGCCACTGCCTGCGTTAATAGGTGAAGGGGGAGCTTTGGATTTGTTTGAATTGTTCTTGGTAGTAAGAGATAAAGGAGGTTCTCAAGTGGTTTCAGAGAAGAAACTATGGTCTTCAGTGGTTGTGGAATTAGGTTTGGATCTTGGGCTTTCGGCTTCGGTGAAATTGATTTATTCCAAGTACTTAAGTGATCTAGAGAAATGGCTTATGGTGAGATGTGGAGACACAAAACTGGAAAATGGGAGCTCTGATTATTGCTACAAGAAAAGTTCTCCATTTTTGTCGGAACTCGGGGCAAAGATTAACGGTATGTTGTATGGTGTGCCGAGACAAAATAGCATATATGATGAATGTTTTGGATTCAAATCTAACAAACAGAATGGGAACGTTAATGTTGCTGCCGCTGCAGTGGAGAAGGAAATAAAATTCTCTGAAATAAAGAAGAAAGAACACGATCTCCATGGGGATGTTACACCAATTCAACAAGATTGTACAGAGACGCATCCAATCCATGTTATTGAAGATGGTCAAAGTTTGGATGCTGTTAATGTTGAAGCTGAAATAGAATCTCTTGGGAAATATCGAGAATCGTTATTACGAATGCTGAAGTGGGTGAGAAAGACTGCGAAGCATCCTGAAGATCCATTAAATGGTACAATACTGGGGGCATCAAGGTGGAAAGGTTACTCGAGCGATGATGCATTATGGCTTCAAGTAATCAGTGCAAAGGATGCTCTTCTAATTAGGAAGGGTGTTGACAAAATCGCTGAGAAACGTCTTTTAATACAGGATAGAGTCTTCTGA ATGGGGAGATGGCATGTTTCATCTAATGCTTCCATTTTAGATTGCAATAAAGATGTAGATCCTAATCCTAGTAATGGCTGTTGCATTGCTTCGGATTGTTTGGTAGAGGGGACTTATGCAAATGTTGATTATGATGATTGCAAGGCGAGAATTAGATGCTATTTTGAGAAAATTCTTTGGGTTTTTTTAAAGGAAATTGGTCGTAGAGGATTTGTTAGGCCACTGCCTGCGTTAATAGGTGAAGGGGGAGCTTTGGATTTGTTTGAATTGTTCTTGGTAGTAAGAGATAAAGGAGGTTCTCAAGTGGTTTCAGAGAAGAAACTATGGTCTTCAGTGGTTGTGGAATTAGGTTTGGATCTTGGGCTTTCGGCTTCGGTGAAATTGATTTATTCCAAGTACTTAAGTGATCTAGAGAAATGGCTTATGGTGAGATGTGGAGACACAAAACTGGAAAATGGGAGCTCTGATTATTGCTACAAGAAAAGTTCTCCATTTTTGTCGGAACTCGGGGCAAAGATTAACGGTATGTTGTATGGTGTGCCGAGACAAAATAGCATATATGATGAATGTTTTGGATTCAAATCTAACAAACAGAATGGGAACGTTAATGTTGCTGCCGCTGCAGTGGAGAAGGAAATAAAATTCTCTGAAATAAAGAAGAAAGAACACGATCTCCATGGGGATGTTACACCAATTCAACAAGATTGTACAGAGACGCATCCAATCCATGTTATTGAAGATGGTCAAAGTTTGGATGCTGTTAATGTTGAAGCTGAAATAGAATCTCTTGGGAAATATCGAGAATCGTTATTACGAATGCTGAAGTGGGTGAGAAAGACTGCGAAGCATCCTGAAGATCCATTAAATGGTACAATACTGGGGGCATCAAGGTGGAAAGGTTACTCGAGCGATGATGCATTATGGCTTCAAGTAATCAGTGCAAAGGATGCTCTTCTAATTAGGAAGGGTGTTGACAAAATCGCTGAGAAACGTCTTTTAATACAGGATAGAGTCTTCTGA MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVEGTYANVDYDDCKARIRCYFEKILWVFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDLGLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGVPRQNSIYDECFGFKSNKQNGNVNVAAAAVEKEIKFSEIKKKEHDLHGDVTPIQQDCTETHPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTILGASRWKGYSSDDALWLQVISAKDALLIRKGVDKIAEKRLLIQDRVF Homology
BLAST of CmaCh16G006020 vs. ExPASy Swiss-Prot
Match: Q9LDD4 (AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=ARID2 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 2.0e-29 Identity = 98/281 (34.88%), Postives = 144/281 (51.25%), Query Frame = 0
BLAST of CmaCh16G006020 vs. ExPASy Swiss-Prot
Match: Q84JT7 (AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=ARID1 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.8e-20 Identity = 88/264 (33.33%), Postives = 115/264 (43.56%), Query Frame = 0
BLAST of CmaCh16G006020 vs. TAIR 10
Match: AT4G11400.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein ) HSP 1 Score: 131.3 bits (329), Expect = 1.4e-30 Identity = 98/281 (34.88%), Postives = 144/281 (51.25%), Query Frame = 0
BLAST of CmaCh16G006020 vs. TAIR 10
Match: AT2G46040.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein ) HSP 1 Score: 100.5 bits (249), Expect = 2.7e-21 Identity = 88/264 (33.33%), Postives = 115/264 (43.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|