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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAAAATTCCGACCAGCTTCCGGCCAACGGAGGCTCTCAATTCCGATCAGTCCCAAAACGCTTCATCTTCCTCATCCTATTCTTATCCGTCACTTACATTGCTTACATTCTCAAAGTCCTCTACTCCGGCGAGCCCTGCCCCGACGGCGACGAACCCATCACAGTCAACAACCAAAAAATCACTGTCCCTTCAATTTCATCAGAACCCTTTATAAGAAATCAAACGATCCCCAATTTCCCACAAAAACCCCATTCCCAAACGGAAATCCAAGACATAGTGTTCGGAATCGCCGCATCGGCAAAGCTATGGCAGAGCAGAAAAGAGTATATAAAGCTCTGGTTCGACCCCACAAAAATGAGGGCGGTGGTCTGGCTGGATGAGCCGGTGGCGACGAAGGCAGAGGAGGCAGAGCTCATCCCGCCGGTGGTGGTGTCGGAAGACACAGAAAGATTCGCATACCGGAATAAACAGGGGGAGCGGTCGGCGATAAGGATATCGAGGATAGTGGCGGAGACGGTGCGTTTAGGGGCGGAGAATGTGAGGTGGGTGGTGATGGGGGACGACGACACGGTGTTTGTGGCGGAGAATCTGGTGAGAGTGCTAAGGAAATACGATCATAATGGGTTTTATTACATCGGAAGCTCATCGGAGAGCCATTTACAGAACATGAAATTTTCGTACGGAATGGCGTATGGCGGCGGAGGATTCGCAATTAGTTATCCATTAGCGAAGGAAATCGAGAAAATGCAGGATGGGTGTTTAGAGAGATACCCGGAGCTTTATGGCTCCGATGATCGGATTCAGGCGTGTATGGCGGAGCTCGGCGTTCCACTCACAAAGGAACTCGGATTTCATCAGTACGACATTTACGGCAGCCTATTCGGGCTCCTCGCAGCGCACCCAGTGACGCCGTTGGTATCCCTGCACCATCTCGACATCGTCGAGCCCATCTTCCCGGCGGTTACAAGGCTGGAAGCTCTCCGGCGACTCTTGGTCCCGATGCGGCTGGACTCTGCAGCCCTAATGCAGCAATCGATCTGCTACGACAGAGCCAGGGGGTGGACCGTGTCCGTCTCGTGGGGCTTTGCAGTCCAAATTTCCCGGGGGATTTTTCCGGCGCGGGAGATTGAGCTGCCTATGAGAACGTTCTTGAATTGGTACCGGAGAGCGGATTACAGTGCGTATGCGTTCAACAGCCGGCCGGTTGTCAGAAATCCGTGTCAGAAGCCGTTCATCTTCTACTTTTCCGATGCCGATTTCAACTCCTCTGCAGGGGTTACTGTGACGGAGTATTTGACCGAGCGTTCGCCGCATCCGTTTTGCAAATGGAACATGGCCGATCCCGGTGAGCTTCACATGGTCGTGGTGGTTAAGAAACACGACCCCACAATTTGGGAACAGGTGAGTTTGAATAATACTCTTTAAGTTTAAAAGAAAATAAAAAATAAATAGTTTAGAATTTTTATAAGTTTGATTTATACTCTTAAATTTTTTTAAAAAAATTTTAAAAATATGTTACTATTATTATATAAATGAAACCATAAAACCATAATTAATAATGTTAATTTTAAAGTTCAATATTTTTTGAAACGGGTAATAACAGTCCTATCTATATGAAGTATTTTTGAAGTTAATTTAGCATATTACATACGTTCGTTAAATTAAGGGTATTATAACGAAGGGTCGTTTTAAGCTAAATTTGTATTCATATGGTTAATACATAAGTTTTTATATAGTGAACTCAACAATGGTGGATTTGTTGTTCTCAGGCACCAAGAAGGAAGTGTTGCAGAGTGATGGGTATGGAGAAGGAAGGAGTGTTGGGTGTTGATGTGGGTACCTGCAGGGAAGGGGAGATCAGTAACTGA mRNA sequence ATGAAAAATTCCGACCAGCTTCCGGCCAACGGAGGCTCTCAATTCCGATCAGTCCCAAAACGCTTCATCTTCCTCATCCTATTCTTATCCGTCACTTACATTGCTTACATTCTCAAAGTCCTCTACTCCGGCGAGCCCTGCCCCGACGGCGACGAACCCATCACAGTCAACAACCAAAAAATCACTGTCCCTTCAATTTCATCAGAACCCTTTATAAGAAATCAAACGATCCCCAATTTCCCACAAAAACCCCATTCCCAAACGGAAATCCAAGACATAGTGTTCGGAATCGCCGCATCGGCAAAGCTATGGCAGAGCAGAAAAGAGTATATAAAGCTCTGGTTCGACCCCACAAAAATGAGGGCGGTGGTCTGGCTGGATGAGCCGGTGGCGACGAAGGCAGAGGAGGCAGAGCTCATCCCGCCGGTGGTGGTGTCGGAAGACACAGAAAGATTCGCATACCGGAATAAACAGGGGGAGCGGTCGGCGATAAGGATATCGAGGATAGTGGCGGAGACGGTGCGTTTAGGGGCGGAGAATGTGAGGTGGGTGGTGATGGGGGACGACGACACGGTGTTTGTGGCGGAGAATCTGGTGAGAGTGCTAAGGAAATACGATCATAATGGGTTTTATTACATCGGAAGCTCATCGGAGAGCCATTTACAGAACATGAAATTTTCGTACGGAATGGCGTATGGCGGCGGAGGATTCGCAATTAGTTATCCATTAGCGAAGGAAATCGAGAAAATGCAGGATGGGTGTTTAGAGAGATACCCGGAGCTTTATGGCTCCGATGATCGGATTCAGGCGTGTATGGCGGAGCTCGGCGTTCCACTCACAAAGGAACTCGGATTTCATCAGTACGACATTTACGGCAGCCTATTCGGGCTCCTCGCAGCGCACCCAGTGACGCCGTTGGTATCCCTGCACCATCTCGACATCGTCGAGCCCATCTTCCCGGCGGTTACAAGGCTGGAAGCTCTCCGGCGACTCTTGGTCCCGATGCGGCTGGACTCTGCAGCCCTAATGCAGCAATCGATCTGCTACGACAGAGCCAGGGGGTGGACCGTGTCCGTCTCGTGGGGCTTTGCAGTCCAAATTTCCCGGGGGATTTTTCCGGCGCGGGAGATTGAGCTGCCTATGAGAACGTTCTTGAATTGGTACCGGAGAGCGGATTACAGTGCGTATGCGTTCAACAGCCGGCCGGTTGTCAGAAATCCGTGTCAGAAGCCGTTCATCTTCTACTTTTCCGATGCCGATTTCAACTCCTCTGCAGGGGTTACTGTGACGGAGTATTTGACCGAGCGTTCGCCGCATCCGTTTTGCAAATGGAACATGGCCGATCCCGGTGAGCTTCACATGGTCGTGGTGGTTAAGAAACACGACCCCACAATTTGGGAACAGGCACCAAGAAGGAAGTGTTGCAGAGTGATGGGTATGGAGAAGGAAGGAGTGTTGGGTGTTGATGTGGGTACCTGCAGGGAAGGGGAGATCAGTAACTGA Coding sequence (CDS) ATGAAAAATTCCGACCAGCTTCCGGCCAACGGAGGCTCTCAATTCCGATCAGTCCCAAAACGCTTCATCTTCCTCATCCTATTCTTATCCGTCACTTACATTGCTTACATTCTCAAAGTCCTCTACTCCGGCGAGCCCTGCCCCGACGGCGACGAACCCATCACAGTCAACAACCAAAAAATCACTGTCCCTTCAATTTCATCAGAACCCTTTATAAGAAATCAAACGATCCCCAATTTCCCACAAAAACCCCATTCCCAAACGGAAATCCAAGACATAGTGTTCGGAATCGCCGCATCGGCAAAGCTATGGCAGAGCAGAAAAGAGTATATAAAGCTCTGGTTCGACCCCACAAAAATGAGGGCGGTGGTCTGGCTGGATGAGCCGGTGGCGACGAAGGCAGAGGAGGCAGAGCTCATCCCGCCGGTGGTGGTGTCGGAAGACACAGAAAGATTCGCATACCGGAATAAACAGGGGGAGCGGTCGGCGATAAGGATATCGAGGATAGTGGCGGAGACGGTGCGTTTAGGGGCGGAGAATGTGAGGTGGGTGGTGATGGGGGACGACGACACGGTGTTTGTGGCGGAGAATCTGGTGAGAGTGCTAAGGAAATACGATCATAATGGGTTTTATTACATCGGAAGCTCATCGGAGAGCCATTTACAGAACATGAAATTTTCGTACGGAATGGCGTATGGCGGCGGAGGATTCGCAATTAGTTATCCATTAGCGAAGGAAATCGAGAAAATGCAGGATGGGTGTTTAGAGAGATACCCGGAGCTTTATGGCTCCGATGATCGGATTCAGGCGTGTATGGCGGAGCTCGGCGTTCCACTCACAAAGGAACTCGGATTTCATCAGTACGACATTTACGGCAGCCTATTCGGGCTCCTCGCAGCGCACCCAGTGACGCCGTTGGTATCCCTGCACCATCTCGACATCGTCGAGCCCATCTTCCCGGCGGTTACAAGGCTGGAAGCTCTCCGGCGACTCTTGGTCCCGATGCGGCTGGACTCTGCAGCCCTAATGCAGCAATCGATCTGCTACGACAGAGCCAGGGGGTGGACCGTGTCCGTCTCGTGGGGCTTTGCAGTCCAAATTTCCCGGGGGATTTTTCCGGCGCGGGAGATTGAGCTGCCTATGAGAACGTTCTTGAATTGGTACCGGAGAGCGGATTACAGTGCGTATGCGTTCAACAGCCGGCCGGTTGTCAGAAATCCGTGTCAGAAGCCGTTCATCTTCTACTTTTCCGATGCCGATTTCAACTCCTCTGCAGGGGTTACTGTGACGGAGTATTTGACCGAGCGTTCGCCGCATCCGTTTTGCAAATGGAACATGGCCGATCCCGGTGAGCTTCACATGGTCGTGGTGGTTAAGAAACACGACCCCACAATTTGGGAACAGGCACCAAGAAGGAAGTGTTGCAGAGTGATGGGTATGGAGAAGGAAGGAGTGTTGGGTGTTGATGTGGGTACCTGCAGGGAAGGGGAGATCAGTAACTGA Protein sequence MKNSDQLPANGGSQFRSVPKRFIFLILFLSVTYIAYILKVLYSGEPCPDGDEPITVNNQKITVPSISSEPFIRNQTIPNFPQKPHSQTEIQDIVFGIAASAKLWQSRKEYIKLWFDPTKMRAVVWLDEPVATKAEEAELIPPVVVSEDTERFAYRNKQGERSAIRISRIVAETVRLGAENVRWVVMGDDDTVFVAENLVRVLRKYDHNGFYYIGSSSESHLQNMKFSYGMAYGGGGFAISYPLAKEIEKMQDGCLERYPELYGSDDRIQACMAELGVPLTKELGFHQYDIYGSLFGLLAAHPVTPLVSLHHLDIVEPIFPAVTRLEALRRLLVPMRLDSAALMQQSICYDRARGWTVSVSWGFAVQISRGIFPAREIELPMRTFLNWYRRADYSAYAFNSRPVVRNPCQKPFIFYFSDADFNSSAGVTVTEYLTERSPHPFCKWNMADPGELHMVVVVKKHDPTIWEQAPRRKCCRVMGMEKEGVLGVDVGTCREGEISN
Homology
BLAST of CmaCh16G006000 vs. TAIR 10
Match: AT5G41460.1 (Protein of unknown function (DUF604) ) HSP 1 Score: 633.3 bits (1632), Expect = 1.7e-181 Identity = 307/504 (60.91%), Postives = 379/504 (75.20%), Query Frame = 0
Query: 9 ANGGSQFRSVPKRFIFLILFLSVTYIAYILKVLYSGEPCPDGDEPITVNNQKITVPSISS 68
+ GS R V K + L+L +S TY+ Y LK++ + C EP + +++ SS
Sbjct: 20 SGSGSPTRPVSKLMVTLLLLVSATYVVYTLKLISNSRACQ--VEPFSAVVRRLNDIVNSS 79
Query: 69 EPFI---RNQT--IPNF--------PQKPHSQTEIQDIVFGIAASAKLWQSRKEYIKLWF 128
+P I NQT I ++ P P QT Q +VFGIAASA+LW+ RKEYIK+W+
Sbjct: 80 QPLILFHTNQTAVIKSYASPPPSPPPPPPPPQTGFQHVVFGIAASARLWKQRKEYIKIWY 139
Query: 129 DPTKMRAVVWLDEPVATKAEEAEL-IPPVVVSEDTERFAYRNKQGERSAIRISRIVAETV 188
P +MR+ VWL++PV + EE E+ +PPV +S DT +F Y+NKQG RSAIRISRIV ET+
Sbjct: 140 KPNQMRSYVWLEKPVTEEDEEDEISLPPVKISGDTSKFPYKNKQGHRSAIRISRIVTETL 199
Query: 189 RLGAENVRWVVMGDDDTVFVAENLVRVLRKYDHNGFYYIGSSSESHLQNMKFSYGMAYGG 248
+LG ++VRW VMGDDDTVFVAENL+RVLRKYDHN YYIGS SESHLQN+ FSYGMAYGG
Sbjct: 200 KLGLKDVRWFVMGDDDTVFVAENLIRVLRKYDHNQMYYIGSLSESHLQNIYFSYGMAYGG 259
Query: 249 GGFAISYPLAKEIEKMQDGCLERYPELYGSDDRIQACMAELGVPLTKELGFHQYDIYGSL 308
GGFAISYPLA + KMQD C++RYP LYGSDDR+QACMAELGVPLTKELGFHQYD+YG+L
Sbjct: 260 GGFAISYPLAVALSKMQDRCIKRYPALYGSDDRMQACMAELGVPLTKELGFHQYDVYGNL 319
Query: 309 FGLLAAHPVTPLVSLHHLDIVEPIFPAVTRLEALRRLLVPMRLDSAALMQQSICYDRARG 368
FGLLAAHPV PLV+LHHLD+VEPIFP +TR++AL+ L VP +LDSA LMQQSICYD+ R
Sbjct: 320 FGLLAAHPVAPLVTLHHLDVVEPIFPNMTRVDALKHLQVPAKLDSAGLMQQSICYDKRRK 379
Query: 369 WTVSVSWGFAVQISRGIFPAREIELPMRTFLNWYRRADYSAYAFNSRPVVRNPCQKPFIF 428
WTVSVSWGFAVQI RGIF AREIE+P RTFLNWYRRADY+AYAFN+RPV R+PCQKPF+F
Sbjct: 380 WTVSVSWGFAVQIFRGIFSAREIEMPSRTFLNWYRRADYTAYAFNTRPVSRHPCQKPFVF 439
Query: 429 YFSDADFNSSAGVTVTEYLTERSPHPFCKWNMADPGELHMVVVVKKHDPTIWEQAPRRKC 488
Y + + +TV+ Y R HP C+W MA+P ++ V+V KK DP +W+++PRR C
Sbjct: 440 YMTSTRVHRVTNMTVSRYEIHRVAHPECRWKMANPSDIKTVIVYKKPDPHLWDRSPRRNC 499
Query: 489 CRVMGMEKEGVLGVDVGTCREGEI 499
CRV +K L + V C+EGE+
Sbjct: 500 CRVKS-KKNNTLEISVAVCKEGEV 520
BLAST of CmaCh16G006000 vs. TAIR 10
Match: AT4G23490.1 (Protein of unknown function (DUF604) ) HSP 1 Score: 626.7 bits (1615), Expect = 1.6e-179 Identity = 294/496 (59.27%), Postives = 373/496 (75.20%), Query Frame = 0
Query: 16 RSVPKRFIFLILFLSVTYIAYILKVLYSGEPCPDGDEPITVN----NQKITVPSISSEPF 75
R PK ++LI F+ TYI Y+LK++ + C D TV+ N V S+S+
Sbjct: 31 RPGPKLMVWLICFIVFTYIIYMLKLVSTSRSCDDSTSFTTVSALSTNVSSNVSSLSTSLA 90
Query: 76 IRNQTIPNFPQKPHSQ-----TEIQDIVFGIAASAKLWQSRKEYIKLWFDPTKMRAVVWL 135
R + N+ ++ T++ +VFGIAAS+KLW+ RKEYIK+W+ P +MR VWL
Sbjct: 91 SRRR---NWEEEEEDTVVDKLTDLNHVVFGIAASSKLWKQRKEYIKIWYKPKRMRGYVWL 150
Query: 136 DEPV---ATKAEEAELIPPVVVSEDTERFAYRNKQGERSAIRISRIVAETVRLGAENVRW 195
D+ V + ++ +L+PPV +S T F Y NKQG+RSA+RISRIV+ET+RLG +NVRW
Sbjct: 151 DKEVKKSLSDDDDEKLLPPVKISGGTASFPYTNKQGQRSALRISRIVSETLRLGPKNVRW 210
Query: 196 VVMGDDDTVFVAENLVRVLRKYDHNGFYYIGSSSESHLQNMKFSYGMAYGGGGFAISYPL 255
VMGDDDTVFV +NL+RVLRKYDH YYIGS SESHLQN+ FSYGMAYGGGGFAISYPL
Sbjct: 211 FVMGDDDTVFVIDNLIRVLRKYDHEQMYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPL 270
Query: 256 AKEIEKMQDGCLERYPELYGSDDRIQACMAELGVPLTKELGFHQYDIYGSLFGLLAAHPV 315
AK + KMQD C++RYP LYGSDDR+QACMAELGVPLTKELGFHQYD+YG+LFGLLAAHPV
Sbjct: 271 AKALSKMQDRCIQRYPALYGSDDRMQACMAELGVPLTKELGFHQYDVYGNLFGLLAAHPV 330
Query: 316 TPLVSLHHLDIVEPIFPAVTRLEALRRLLVPMRLDSAALMQQSICYDRARGWTVSVSWGF 375
TP VS+HHLD+VEPIFP +TR+ AL+++ PM+LDSA L+QQSICYD+ + WT+SVSWG+
Sbjct: 331 TPFVSMHHLDVVEPIFPNMTRVRALKKITEPMKLDSAGLLQQSICYDKHKSWTISVSWGY 390
Query: 376 AVQISRGIFPAREIELPMRTFLNWYRRADYSAYAFNSRPVVRNPCQKPFIFYFSDADFNS 435
AVQI RGIF RE+E+P RTFLNWY+RADY+AYAFN+RPV RNPCQKPF+FY S F+
Sbjct: 391 AVQIFRGIFSPREMEMPSRTFLNWYKRADYTAYAFNTRPVSRNPCQKPFVFYMSSTKFDQ 450
Query: 436 SAGVTVTEYLTERSPHPFCKWNMADPGELHMVVVVKKHDPTIWEQAPRRKCCRVMGMEKE 495
TV+EY R HP C+W M +P E++ +VV KK DP +WE++PRR CCRV+ ++
Sbjct: 451 QLNTTVSEYTIHRVSHPSCRWKMTNPAEINTIVVYKKPDPHLWERSPRRNCCRVLQTKRN 510
Query: 496 GVLGVDVGTCREGEIS 500
L ++VG CR GE++
Sbjct: 511 NTLWINVGVCRAGEVT 523
BLAST of CmaCh16G006000 vs. TAIR 10
Match: AT4G11350.1 (Protein of unknown function (DUF604) ) HSP 1 Score: 610.9 bits (1574), Expect = 9.1e-175 Identity = 293/510 (57.45%), Postives = 371/510 (72.75%), Query Frame = 0
Query: 2 KNSDQLP----ANGGSQFRSVPKRFIFLILFLSVTYIAYILKVLYSGEPCPDGDEPITVN 61
K+S + P ++ G + I+LILF+SVTYI Y LK++ + PC D
Sbjct: 6 KDSSEKPIWDRSSSGISMTRPGRLIIWLILFISVTYIIYTLKIVSTTHPCED-------- 65
Query: 62 NQKITVPSISSEPFIRNQTIPNFPQKPHSQ--TEIQDIVFGIAASAKLWQSRKEYIKLWF 121
+T SI + + P Q T++ +VFGIAAS+KLW+ RKEYIK+W+
Sbjct: 66 ---LTSESILQQRPEKKAVTVTVKAVPAEQEATDLNHVVFGIAASSKLWKQRKEYIKIWY 125
Query: 122 DPTKMRAVVWLDEPVATKAE--EAELIPPVVVSEDTERFAYRNKQGERSAIRISRIVAET 181
P KMR VWLDE V K+E + E +P V +S DT F Y NKQG RSAIRISRIV+ET
Sbjct: 126 KPKKMRGYVWLDEEVKIKSETGDQESLPSVRISGDTSSFPYTNKQGHRSAIRISRIVSET 185
Query: 182 VRL----GAENVRWVVMGDDDTVFVAENLVRVLRKYDHNGFYYIGSSSESHLQNMKFSYG 241
+ +NVRW VMGDDDTVFV +NL+RVLRKYDH YYIGS SESHLQN+ FSYG
Sbjct: 186 LMSLDSESKKNVRWFVMGDDDTVFVTDNLIRVLRKYDHEQMYYIGSLSESHLQNIIFSYG 245
Query: 242 MAYGGGGFAISYPLAKEIEKMQDGCLERYPELYGSDDRIQACMAELGVPLTKELGFHQYD 301
MAYGGGGFAISYPLA + KMQD C++RYP LYGSDDR+QACMAELGVPLTKE+GFHQYD
Sbjct: 246 MAYGGGGFAISYPLAVALSKMQDQCIQRYPALYGSDDRMQACMAELGVPLTKEIGFHQYD 305
Query: 302 IYGSLFGLLAAHPVTPLVSLHHLDIVEPIFPAVTRLEALRRLLVPMRLDSAALMQQSICY 361
++G+LFGLLAAHP+TP VS+HHLD+VEPIFP +TR+ A+++L PM++DSAAL+QQSICY
Sbjct: 306 VHGNLFGLLAAHPITPFVSMHHLDVVEPIFPNMTRVRAIKKLTTPMKIDSAALLQQSICY 365
Query: 362 DRARGWTVSVSWGFAVQISRGIFPAREIELPMRTFLNWYRRADYSAYAFNSRPVVRNPCQ 421
D+ + WT+SVSWGFAVQ+ RG F RE+E+P RTFLNWY+RADY+AYAFN+RPV RN CQ
Sbjct: 366 DKHKSWTISVSWGFAVQVFRGSFSPREMEMPSRTFLNWYKRADYTAYAFNTRPVSRNHCQ 425
Query: 422 KPFIFYFSDADFNSSAGVTVTEYLTERSPHPFCKWNMADPGELHMVVVVKKHDPTIWEQA 481
KPF+F+ S A F+ TV+EY R P P C+W+MA+P E++ +VV KK DP +W ++
Sbjct: 426 KPFVFHMSSAKFDPQLNTTVSEYTRHRVPQPACRWDMANPEEINTIVVYKKPDPHLWNRS 485
Query: 482 PRRKCCRVMGMEKEGVLGVDVGTCREGEIS 500
PRR CCRV+ ++ L ++VG CR GE++
Sbjct: 486 PRRNCCRVLQTKRNNTLWINVGVCRAGEVT 504
BLAST of CmaCh16G006000 vs. TAIR 10
Match: AT1G01570.1 (Protein of unknown function (DUF604) ) HSP 1 Score: 535.4 bits (1378), Expect = 4.8e-152 Identity = 257/448 (57.37%), Postives = 331/448 (73.88%), Query Frame = 0
Query: 65 SISSEPFIRNQTIP----NFPQKPHSQTEIQDIVFGIAASAKLWQSRKEYIKLWFDPT-K 124
S SS+P I+ P + QTE++ +VFGIAASAK W+ RK+Y+KLW+ P +
Sbjct: 26 SSSSQPLIKFSVSPVVSGSGSVHEPDQTELKHVVFGIAASAKFWKHRKDYVKLWWKPNGE 85
Query: 125 MRAVVWLDEPVATKAEEAELIPPVVVSEDTERFAYRNKQGERSAIRISRIVAETVRL--G 184
M VVWLD+ + ++ +PP+ +S DT RF YR +G RSAIRI+RIV+ETVRL G
Sbjct: 86 MNGVVWLDQHINQNDNVSKTLPPIRISSDTSRFQYRYPKGLRSAIRITRIVSETVRLLNG 145
Query: 185 AE---NVRWVVMGDDDTVFVAENLVRVLRKYDHNGFYYIGSSSESHLQNMKFSYGMAYGG 244
E NVRW+VMGDDDTVF ENLV+VLRKYDHN FYYIGSSSESH+QN+KFSYGMAYGG
Sbjct: 146 TELEKNVRWIVMGDDDTVFFPENLVKVLRKYDHNQFYYIGSSSESHIQNLKFSYGMAYGG 205
Query: 245 GGFAISYPLAKEIEKMQDGCLERYPELYGSDDRIQACMAELGVPLTKELGFHQYDIYGSL 304
GGFAISYPLAK +EKMQD C++RY ELYGSDDRI ACM+ELGVPLTKE+GFHQ D+YG L
Sbjct: 206 GGFAISYPLAKALEKMQDRCIQRYSELYGSDDRIHACMSELGVPLTKEVGFHQIDLYGKL 265
Query: 305 FGLLAAHPVTPLVSLHHLDIVEPIFPAVTRLEALRRLLVPMRLDSAALMQQSICYDRARG 364
GLL+AHP+ PLVS+HHLD+V+P+FP + R+ A+RR +VP +LDS +L QQSICYD
Sbjct: 266 LGLLSAHPLAPLVSIHHLDLVDPVFPNMGRVNAMRRFMVPAKLDSPSLAQQSICYDADHR 325
Query: 365 WTVSVSWGFAVQISRGIFPAREIELPMRTFLNWYRRADYSAYAFNSRPVVRNPCQKPFIF 424
WTVSVSWG+ VQI RG+ ARE+ +P RTF++WY++AD +YAFN+RP+ ++ CQ+P ++
Sbjct: 326 WTVSVSWGYTVQIIRGVLSAREMVIPTRTFIDWYKQADERSYAFNTRPIAKSACQRPRVY 385
Query: 425 YFSDADFNSSAGVTVTEYLTERSP-HPFCKWNMADPGELHMVVVVKKHDPTIW--EQAPR 484
Y S+A + + T +EY+ P C W+M+DP E V+V KK DP W +APR
Sbjct: 386 YLSNALPDLALRRTASEYVRWYDMWEPECDWDMSDPSEFERVIVYKKPDPDRWNKHRAPR 445
Query: 485 RKCCRVMGMEKEGVLGVDVGTCREGEIS 500
R CCRV+ K G + +DVG C++ E +
Sbjct: 446 RDCCRVLPTTKNGTMVIDVGACKDDEFA 473
BLAST of CmaCh16G006000 vs. TAIR 10
Match: AT1G07850.1 (Protein of unknown function (DUF604) ) HSP 1 Score: 526.2 bits (1354), Expect = 2.9e-149 Identity = 243/422 (57.58%), Postives = 313/422 (74.17%), Query Frame = 0
Query: 80 FPQKPHS-QTEIQDIVFGIAASAKLWQSRKEYIKLWFDPTKMRAVVWLDEPVATKAEEAE 139
+PQ+P T + IVFGIAAS+ LW++RKEYIK W+ P K R VVW+D+ V T +
Sbjct: 114 YPQRPRMFNTTLDHIVFGIAASSVLWETRKEYIKSWWRPGKTRGVVWIDKRVRTYRNDP- 173
Query: 140 LIPPVVVSEDTERFAYRNKQGERSAIRISRIVAETVRLGAENVRWVVMGDDDTVFVAENL 199
+P + +S+DT RF Y + G+RSA+RISR+V ET+RLG + VRW VMGDDDTVFV +N+
Sbjct: 174 -LPEIRISQDTSRFRYTHPVGDRSAVRISRVVTETLRLGKKGVRWFVMGDDDTVFVVDNV 233
Query: 200 VRVLRKYDHNGFYYIGSSSESHLQNMKFSYGMAYGGGGFAISYPLAKEIEKMQDGCLERY 259
V VL KYDH FYY+GSSSE+H+QN+ FSY MA+GGGGFAISY LA E+ +MQD C++RY
Sbjct: 234 VNVLSKYDHTQFYYVGSSSEAHVQNIFFSYSMAFGGGGFAISYALALELLRMQDRCIQRY 293
Query: 260 PELYGSDDRIQACMAELGVPLTKELGFHQYDIYGSLFGLLAAHPVTPLVSLHHLDIVEPI 319
P LYGSDDRIQACM ELGVPLTKE GFHQYD+YG L GLL AHPV PLVSLHH+D+V+PI
Sbjct: 294 PGLYGSDDRIQACMTELGVPLTKEPGFHQYDVYGDLLGLLGAHPVAPLVSLHHIDVVQPI 353
Query: 320 FPAVTRLEALRRLLVPMRLDSAALMQQSICYDRARGWTVSVSWGFAVQISRGIFPAREIE 379
FP + R ALR L+ LD A++ QQSICYD+ R W++SVSWGF VQI RGI RE+E
Sbjct: 354 FPKMKRSRALRHLMSSAVLDPASIFQQSICYDQNRFWSISVSWGFVVQIIRGIISPRELE 413
Query: 380 LPMRTFLNWYRRADYSAYAFNSRPVVRNPCQKPFIFYFSDADFNSSAGVTVTEYLTERSP 439
+P RTFLNW+R+ADY YAFN+RPV R+PCQ+PF+FY + A ++ + Y +++
Sbjct: 414 MPSRTFLNWFRKADYIGYAFNTRPVSRHPCQRPFVFYLNSAKYDEGRRQVIGYYNLDKTR 473
Query: 440 H-PFCKWNMADPGELHMVVVVKKHDPTIWEQAPRRKCCRVMGMEKEGVLGVDVGTCREGE 499
P C+W + PG++ VVV+K+ DP W ++PRR CCRV+ + + + VG C +GE
Sbjct: 474 RIPGCRWRLDSPGKIDSVVVLKRPDPLRWHKSPRRDCCRVLPSRRNQTMYIWVGNCADGE 533
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR006740 | Protein of unknown function DUF604 | PFAM | PF04646 | DUF604 | coord: 222..475
e-value: 9.5E-112
score: 372.5 |
| None | No IPR available | GENE3D | 3.90.550.50 | | coord: 80..329
e-value: 5.5E-43
score: 149.1 |
| None | No IPR available | PANTHER | PTHR10811:SF81 | TRANSFERRING GLYCOSYL GROUP TRANSFERASE | coord: 16..498 |
| None | No IPR available | PANTHER | PTHR10811 | FRINGE-RELATED | coord: 16..498 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0008375 |
acetylglucosaminyltransferase activity |
|
